AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1078130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078130 MtrunA17_Chr7g0262631 96.853 985 28 3 1 985 1 982 0.0 1952
Msa1078130 MtrunA17_Chr1g0182831 56.551 893 323 22 105 984 1 841 0.0 796
Msa1078130 MtrunA17_Chr1g0182111 29.135 532 282 19 61 558 30 500 1.16e-23 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078130 AT4G28760.2 44.132 997 443 33 14 982 13 923 0.0 631
Msa1078130 AT4G28760.1 44.132 997 443 33 14 982 13 923 0.0 631
Msa1078130 AT5G43880.3 37.090 976 393 34 19 959 13 802 1.02e-136 431
Msa1078130 AT5G43880.2 37.090 976 393 34 19 959 13 802 1.02e-136 431
Msa1078130 AT5G43880.4 37.090 976 393 34 19 959 13 802 1.02e-136 431
Msa1078130 AT5G43880.1 37.090 976 393 34 19 959 13 802 1.02e-136 431
Msa1078130 AT2G20240.1 37.138 622 281 23 87 686 10 543 4.67e-66 236
Msa1078130 AT2G20240.1 39.130 276 107 8 706 981 498 712 9.32e-40 158
Msa1078130 AT3G53540.2 37.766 188 92 6 93 274 91 259 1.04e-21 102
Msa1078130 AT3G53540.1 37.968 187 91 6 94 274 61 228 1.08e-21 102

Find 270 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGATTTGAAATGGATATT+TGG 0.167673 7_2:+77020299 Msa1078130:CDS
ACAAAGATATTTATGAATTA+TGG 0.185101 7_2:+77017101 Msa1078130:CDS
TAAAGGGTGGGTTGAGCTTA+TGG 0.206293 7_2:+77020279 Msa1078130:CDS
CAATTTCTTTGGACATTTCT+TGG 0.216516 7_2:-77016856 None:intergenic
ATGCTTGGAAACAATTTCTT+TGG 0.217751 7_2:-77016867 None:intergenic
CACGCAACATCATTATTTAA+TGG 0.233056 7_2:-77017475 None:intergenic
CAGCAAACTCATCAACTTTC+TGG 0.239330 7_2:-77017531 None:intergenic
TCAGTAGCATTTAATAAATT+AGG 0.239479 7_2:-77020497 None:intergenic
AGGACTTCAGGTGAGTTTAT+TGG 0.241287 7_2:-77018477 None:intergenic
AAATGTGGTTGCAAAATTAA+TGG 0.251624 7_2:+77016898 Msa1078130:CDS
TAGTGGCATGAGGTCTGTTT+GGG 0.254407 7_2:+77020195 Msa1078130:CDS
AAACCAATGAAGGCTTTAAT+TGG 0.261992 7_2:-77019775 None:intergenic
GGCTTTGACATGGTCAATTC+AGG 0.263143 7_2:-77019402 None:intergenic
CGATCTGTTAATAAAGTTAC+TGG 0.266125 7_2:+77017315 Msa1078130:CDS
GTTGGAGCTTAAAACTTCTA+AGG 0.271656 7_2:-77017290 None:intergenic
GCAGCTGGAAGATAGGTTTA+TGG 0.274569 7_2:+77017030 Msa1078130:CDS
CGGATTAGAAAGTTCCTTAA+TGG 0.284283 7_2:+77020072 Msa1078130:CDS
TCTTTCAGAAAGTCGTTTCT+TGG 0.289950 7_2:-77017989 None:intergenic
CTAGTGGCATGAGGTCTGTT+TGG 0.294493 7_2:+77020194 Msa1078130:CDS
AGCTTCAACGGTGGCTTCTC+TGG 0.308318 7_2:+77018519 Msa1078130:CDS
ACTCCACAACCTGCCCATTA+AGG 0.313097 7_2:-77020086 None:intergenic
AATACACGGTTTCATCTCTT+TGG 0.327947 7_2:-77017756 None:intergenic
CAGAGGTGAAGATATTTAAT+AGG 0.329307 7_2:-77020564 None:intergenic
TTGTGTCAATGTTGCACTAA+TGG 0.332246 7_2:+77020036 Msa1078130:CDS
AGTATGAAATCATCATTTAA+AGG 0.332908 7_2:+77018342 Msa1078130:CDS
GGGATTTGAAATGGATATTT+GGG 0.336959 7_2:+77020300 Msa1078130:CDS
AAAGGGTGGGTTGAGCTTAT+GGG 0.338522 7_2:+77020280 Msa1078130:CDS
TGTGAGGGCGCATGATATTA+AGG 0.340359 7_2:+77017591 Msa1078130:CDS
TTTGCATTTACAACAGTAGA+AGG 0.341551 7_2:-77015965 None:intergenic
GTTGCACTAATGGAAATTAC+TGG 0.343281 7_2:+77020046 Msa1078130:CDS
CTTCGCTTTGCTTCGTGTAC+AGG 0.352408 7_2:-77019980 None:intergenic
CACCATCTCCAAGACATTCT+TGG 0.352438 7_2:+77017878 Msa1078130:CDS
TTGGTCCATAAGCATCTTGA+TGG 0.355949 7_2:-77016837 None:intergenic
ATACAATCAAATCCACCAAT+AGG 0.367979 7_2:-77020150 None:intergenic
CTGCGACATCATTCAATCAT+TGG 0.378641 7_2:+77017008 Msa1078130:CDS
CTTTGACTTTGTCAGCTCCT+TGG 0.386187 7_2:-77018319 None:intergenic
TAATGGGCAGGTTGTGGAGT+GGG 0.387786 7_2:+77020089 Msa1078130:CDS
TGAGCTTATGGGATTTGAAA+TGG 0.388874 7_2:+77020291 Msa1078130:CDS
TTTAATAAATTAGGTTAAGT+AGG 0.390124 7_2:-77020488 None:intergenic
CTCCCCGTGGAAGGGCTTCA+AGG 0.395279 7_2:-77016922 None:intergenic
CTGAAGGATGAAGACGAATA+AGG 0.395402 7_2:-77017925 None:intergenic
AAAGCCTTCATTGGTTTCCT+TGG 0.396749 7_2:+77019781 Msa1078130:CDS
AGAGAGCGGAGTGGTTAGGT+TGG 0.396987 7_2:-77015333 None:intergenic
AATGTGGTTGCAAAATTAAT+GGG 0.399040 7_2:+77016899 Msa1078130:CDS
AGAGAGAGAGCGGAGTGGTT+AGG 0.401422 7_2:-77015337 None:intergenic
CTTTATTAACAGATCGTTGT+TGG 0.402343 7_2:-77017308 None:intergenic
ACCATCTCCAAGACATTCTT+GGG 0.403090 7_2:+77017879 Msa1078130:CDS
ATTCTTTATATACTTTGTTT+CGG 0.405860 7_2:-77020587 None:intergenic
GGAGGTTCTAAAACTGAGAT+TGG 0.405864 7_2:-77019468 None:intergenic
TGGGTTAGCTTAGCTAAGTT+AGG 0.407458 7_2:-77015313 None:intergenic
GGTGTTTGCGTCGCGTGGTC+AGG 0.408263 7_2:-77015292 None:intergenic
GTACCAATTAAAGCCTTCAT+TGG 0.408302 7_2:+77019772 Msa1078130:CDS
TTAGCTGTGGAGAGAAGCCC+TGG 0.408972 7_2:+77016953 Msa1078130:CDS
TCCTGGATGTCTGGGAAGAA+TGG 0.411228 7_2:+77015922 Msa1078130:CDS
CACATTTGGTGGACTATGCT+TGG 0.411823 7_2:-77016882 None:intergenic
TAGATGTCAACTCCTTCATA+TGG 0.415286 7_2:-77020174 None:intergenic
ATGATCGCGGTGCGGTTTAT+CGG 0.417070 7_2:-77015999 None:intergenic
ATTGACAAATCACCACCTAT+AGG 0.417115 7_2:+77019695 Msa1078130:CDS
GGATTAGAAAGTTCCTTAAT+GGG 0.418900 7_2:+77020073 Msa1078130:CDS
AACACCCATCAAGATGCTTA+TGG 0.422703 7_2:+77016832 Msa1078130:CDS
AGGACTGCAAGTCCTTCATT+TGG 0.422950 7_2:+77016562 Msa1078130:CDS
ATCATTGGCAGCTGGAAGAT+AGG 0.423993 7_2:+77017023 Msa1078130:CDS
CTTCCCAGACATCCAGGAAA+AGG 0.425373 7_2:-77015917 None:intergenic
TCATTGTCAACCATCTTTGA+AGG 0.425497 7_2:-77017406 None:intergenic
CCCTGAGGATGATGATCTAC+TGG 0.426970 7_2:+77017675 Msa1078130:CDS
CTAATGGAAATTACTGGTTA+CGG 0.428320 7_2:+77020052 Msa1078130:CDS
CAAGGAATAAGAAATCAATC+AGG 0.428854 7_2:+77018388 Msa1078130:CDS
AGAAAAGAGGTCGTGGGTAA+AGG 0.432505 7_2:+77020262 Msa1078130:CDS
GAGAGCGGAGTGGTTAGGTT+GGG 0.433479 7_2:-77015332 None:intergenic
GAAAAGAGGTCGTGGGTAAA+GGG 0.433603 7_2:+77020263 Msa1078130:CDS
CGTTCTTAAACCTTCAAAGA+TGG 0.433750 7_2:+77017396 Msa1078130:CDS
AGGTTCATTGTCATTGAGAT+TGG 0.436139 7_2:-77019954 None:intergenic
TCATCAACTTTCTGGCTGGC+TGG 0.437058 7_2:-77017523 None:intergenic
TTGTTTGTTCAAGACAGAAC+TGG 0.437718 7_2:-77018589 None:intergenic
TCCCTCAATGTTGGATCCAA+TGG 0.437770 7_2:-77019923 None:intergenic
CTGGAAATCCATGGCACCCT+GGG 0.438188 7_2:-77019423 None:intergenic
TACTGACGACTCAGGAGAAC+AGG 0.438301 7_2:-77017956 None:intergenic
TGTTTCTGCAACAGTTGATT+GGG 0.438657 7_2:-77018445 None:intergenic
AATGGGCAGGTTGTGGAGTG+GGG 0.440726 7_2:+77020090 Msa1078130:CDS
AGAGGGTGCACCTTCCCTAT+TGG 0.446379 7_2:+77020135 Msa1078130:CDS
TCCAACTCTTTGTGAATCAT+CGG 0.447252 7_2:+77018554 Msa1078130:CDS
GTATGAAATCATCATTTAAA+GGG 0.449006 7_2:+77018343 Msa1078130:CDS
AAGTAATAAATGAGTGGAAT+GGG 0.451237 7_2:+77015234 None:intergenic
TCTTCCACTGTCTATGAACA+TGG 0.453480 7_2:+77018249 Msa1078130:CDS
GTTCCTTAATGGGCAGGTTG+TGG 0.456811 7_2:+77020083 Msa1078130:CDS
GGGTGCACCTTCCCTATTGG+TGG 0.458374 7_2:+77020138 Msa1078130:CDS
CAAACAAGGCGTAATATCTC+TGG 0.459180 7_2:+77018605 Msa1078130:CDS
TCCAGTAGATCATCATCCTC+AGG 0.460373 7_2:-77017676 None:intergenic
TACAATCAAATCCACCAATA+GGG 0.462364 7_2:-77020149 None:intergenic
TCATGCGCCCTCACAGAACT+TGG 0.463375 7_2:-77017583 None:intergenic
TGGCATGAGGTCTGTTTGGG+GGG 0.464722 7_2:+77020198 Msa1078130:CDS
CTGCAAGAAACAGATTCATT+CGG 0.465177 7_2:-77018153 None:intergenic
ACCATTCTTCCCAGACATCC+AGG 0.466011 7_2:-77015923 None:intergenic
AAGGTGCACCCTCTGATCCT+TGG 0.466050 7_2:-77020126 None:intergenic
CCAACTCTTTGTGAATCATC+GGG 0.468561 7_2:+77018555 Msa1078130:CDS
TCAGATCATGAGTGTACTGC+TGG 0.469320 7_2:+77017829 Msa1078130:CDS
TCTTCAAATAAGAAAGTAAA+CGG 0.469772 7_2:+77016809 Msa1078130:CDS
CCCGATGATTCACAAAGAGT+TGG 0.470013 7_2:-77018555 None:intergenic
TCTCTAATATCTGAGTTTGA+AGG 0.470227 7_2:+77018111 Msa1078130:CDS
ATGTTTCTGCAACAGTTGAT+TGG 0.470472 7_2:-77018446 None:intergenic
TAAACTCACCTGAAGTCCTT+AGG 0.471781 7_2:+77018481 Msa1078130:CDS
TTTGCTTCGTGTACAGGTTG+AGG 0.473135 7_2:-77019974 None:intergenic
ATGTCATTCCTAAGGACTTC+AGG 0.473201 7_2:-77018489 None:intergenic
CAGTGGTTGATTTGACAGGC+AGG 0.476740 7_2:+77020368 Msa1078130:CDS
TATATACTTTGTTTCGGCAG+AGG 0.478045 7_2:-77020581 None:intergenic
AGAAACGACTTTCTGAAAGA+TGG 0.480531 7_2:+77017992 Msa1078130:CDS
TTGCAAGTTTCTTATTCTCA+AGG 0.482048 7_2:+77018370 Msa1078130:CDS
TGCTGAGAACAATCTCCTCC+AGG 0.483877 7_2:-77016971 None:intergenic
AAATGCAGCTCATGAGTCCT+TGG 0.484284 7_2:+77019503 Msa1078130:CDS
TTTGATTGTATCCCATATGA+AGG 0.487771 7_2:+77020162 Msa1078130:CDS
GTTCGAGCTATTGATCCTAT+AGG 0.487955 7_2:-77019710 None:intergenic
CACAAGAATCATCCCATGAG+AGG 0.492500 7_2:-77019733 None:intergenic
ACTGGAAATCCATGGCACCC+TGG 0.492769 7_2:-77019424 None:intergenic
TAAGCAACCTGTTCTCTGCT+CGG 0.492879 7_2:-77017079 None:intergenic
AACTATGTTCTCCCCGTGGA+AGG 0.495382 7_2:-77016931 None:intergenic
CATCTAGAATAAAACGAGTC+AGG 0.495507 7_2:-77019884 None:intergenic
GCATTCTCTTGAAAGTCCAT+TGG 0.496290 7_2:+77019907 Msa1078130:CDS
AAAGTAATAAATGAGTGGAA+TGG 0.496479 7_2:+77015233 None:intergenic
GGCCATGATGGCATCTAAGA+AGG 0.496988 7_2:+77018014 Msa1078130:CDS
TAGAAAGTTCCTTAATGGGC+AGG 0.497508 7_2:+77020077 Msa1078130:CDS
GGGAAGAAGATAGTCAGAAA+AGG 0.497801 7_2:+77015254 Msa1078130:five_prime_UTR
TCAACCCACTTCCGTCTCTC+CGG 0.501997 7_2:-77017163 None:intergenic
AGTTCATCCGAGCAGAGAAC+AGG 0.502239 7_2:+77017072 Msa1078130:CDS
TTGTGGGGACAGCAACAGCC+TGG 0.504126 7_2:+77020222 Msa1078130:CDS
CAATAGCTCGAACCCTCTCA+TGG 0.504147 7_2:+77019720 Msa1078130:CDS
CAGAAGGCTCCAAGGATCAG+AGG 0.505421 7_2:+77020117 Msa1078130:CDS
ATGGGCAGGTTGTGGAGTGG+GGG 0.511735 7_2:+77020091 Msa1078130:CDS
TGTTCAACCTACTCGAATAG+TGG 0.511840 7_2:+77017552 Msa1078130:CDS
ACGAAATCCCAAGAATGTCT+TGG 0.512601 7_2:-77017886 None:intergenic
TGGCTGGCTGGAGAGTATCC+AGG 0.512620 7_2:-77017511 None:intergenic
CAAGTCCTTCATTTGGTGAT+CGG 0.512783 7_2:+77016569 Msa1078130:CDS
GCGTATTTGTCCCTCAATGT+TGG 0.513145 7_2:-77019932 None:intergenic
GTGGCATGAGGTCTGTTTGG+GGG 0.513197 7_2:+77020197 Msa1078130:CDS
AAGAGGTCGTGGGTAAAGGG+TGG 0.514097 7_2:+77020266 Msa1078130:CDS
GATGCAGTGGTTGATTTGAC+AGG 0.514635 7_2:+77020364 Msa1078130:CDS
GGGCCTTGAAGCCCTTCCAC+GGG 0.514911 7_2:+77016919 Msa1078130:CDS
ATCATTCAATCATTGGCAGC+TGG 0.517231 7_2:+77017015 Msa1078130:CDS
TTCTGAAAGATGGGCCATGA+TGG 0.519187 7_2:+77018002 Msa1078130:CDS
TTCCTTGGACACGAAGGTAG+AGG 0.521100 7_2:+77019796 Msa1078130:CDS
TATGCGGAGAAGCTCTACCT+TGG 0.522381 7_2:+77018056 Msa1078130:CDS
GAGAGAGCGAACCTGGGAGG+AGG 0.522523 7_2:-77015400 None:intergenic
GAGACAAGACACCGGAGAGA+CGG 0.523593 7_2:+77017152 Msa1078130:CDS
ATGCGGAGAAGCTCTACCTT+GGG 0.524759 7_2:+77018057 Msa1078130:CDS
ATCCTCTACCTTCGTGTCCA+AGG 0.527264 7_2:-77019798 None:intergenic
TGAAATGGATATTTGGGTGA+AGG 0.527491 7_2:+77020306 Msa1078130:CDS
CTGATCCTTGGAGCCTTCTG+TGG 0.531016 7_2:-77020114 None:intergenic
TTAATGGGCAGGTTGTGGAG+TGG 0.533107 7_2:+77020088 Msa1078130:CDS
GAAGTCAATCAGATGTTTCG+AGG 0.533845 7_2:+77016542 Msa1078130:CDS
AAACTCATCAACTTTCTGGC+TGG 0.536053 7_2:-77017527 None:intergenic
TGGCACCCTGGGCTTTGACA+TGG 0.536764 7_2:-77019412 None:intergenic
GGACAGCAACAGCCTGGTGG+TGG 0.537553 7_2:+77020228 Msa1078130:CDS
AATTGACCATGTCAAAGCCC+AGG 0.538303 7_2:+77019406 Msa1078130:CDS
CATTAAATAATGATGTTGCG+TGG 0.538886 7_2:+77017476 Msa1078130:CDS
TGTCAAAGCCCAGGGTGCCA+TGG 0.539757 7_2:+77019415 Msa1078130:CDS
GAAACGACTTTCTGAAAGAT+GGG 0.541727 7_2:+77017993 Msa1078130:CDS
ATTTGGGTGAAGGAAGTAGA+GGG 0.542086 7_2:+77020316 Msa1078130:CDS
CAGAAATTACTATCAGCTGC+TGG 0.542214 7_2:+77019842 Msa1078130:CDS
ACCCTTCTTAGATGCCATCA+TGG 0.543657 7_2:-77018016 None:intergenic
CAAAGCAGTAAGCCACATCA+AGG 0.544060 7_2:-77020412 None:intergenic
TGGTCCATAAGCATCTTGAT+GGG 0.545473 7_2:-77016836 None:intergenic
TGTTGTCAGAAAAGAGGTCG+TGG 0.546009 7_2:+77020255 Msa1078130:CDS
CATCTTTGAAGGTTTAAGAA+CGG 0.546511 7_2:-77017395 None:intergenic
TCTATCCGATCACCAAATGA+AGG 0.546916 7_2:-77016574 None:intergenic
TTTGAGACATGTCATTCCTA+AGG 0.547159 7_2:-77018497 None:intergenic
ATGTTCTTGTGTAGGTGACT+AGG 0.549960 7_2:+77015842 Msa1078130:intron
AGATGTCAACTCCTTCATAT+GGG 0.551170 7_2:-77020173 None:intergenic
TTTGACAGGCAGGGTCTGAA+TGG 0.551726 7_2:+77020378 Msa1078130:exon
ATGGATTTCCAGTGAAAACC+AGG 0.555895 7_2:+77019434 Msa1078130:CDS
TTATCTATTCTGTAGGATCA+CGG 0.556529 7_2:+77019651 Msa1078130:intron
GAAGCTTGTAATAATGATGC+GGG 0.557322 7_2:+77018282 Msa1078130:CDS
AGTTAGGTGTTTGCGTCGCG+TGG 0.557525 7_2:-77015297 None:intergenic
AATGAAGGCTTTAATTGGTA+CGG 0.558472 7_2:-77019770 None:intergenic
AGTGGCATGAGGTCTGTTTG+GGG 0.558726 7_2:+77020196 Msa1078130:CDS
ATTAAATAATGATGTTGCGT+GGG 0.558891 7_2:+77017477 Msa1078130:CDS
CAAGCATAGTCCACCAAATG+TGG 0.559774 7_2:+77016883 Msa1078130:CDS
AAGTATATAAAGAATTGCAC+TGG 0.563749 7_2:+77020595 Msa1078130:three_prime_UTR
AGACACCGGAGAGACGGAAG+TGG 0.564265 7_2:+77017158 Msa1078130:CDS
TATCTATTCTGTAGGATCAC+GGG 0.566931 7_2:+77019652 Msa1078130:intron
AATCACCGTCTCCTCCTCCC+AGG 0.568166 7_2:+77015389 Msa1078130:five_prime_UTR
AAACCGCACCGCGATCATCA+TGG 0.568228 7_2:+77016004 Msa1078130:CDS
TGGGCCTTGAAGCCCTTCCA+CGG 0.568342 7_2:+77016918 Msa1078130:CDS
TCACCTCAAAATCTGCAAAG+TGG 0.570483 7_2:+77017637 Msa1078130:CDS
TCCATTGGATCCAACATTGA+GGG 0.571482 7_2:+77019922 Msa1078130:CDS
AGAACAGGAAGCGCGACTGA+AGG 0.571867 7_2:-77017941 None:intergenic
GCGAACCTGGGAGGAGGAGA+CGG 0.573265 7_2:-77015394 None:intergenic
AATGAAGAAATACGCGCAGA+TGG 0.575030 7_2:+77018186 Msa1078130:CDS
TGTATGAAGAGTGGTCAGCT+TGG 0.579242 7_2:+77019528 Msa1078130:CDS
CTTCCACTGTCTATGAACAT+GGG 0.579706 7_2:+77018250 Msa1078130:CDS
TTTGCGTCGCGTGGTCAGGT+CGG 0.580905 7_2:-77015288 None:intergenic
TCCCAAGAATGTCTTGGAGA+TGG 0.581007 7_2:-77017880 None:intergenic
TCATAGACAGTGGAAGAAAG+AGG 0.581535 7_2:-77018243 None:intergenic
GAAATTGCTAGAAGAACTTG+TGG 0.582282 7_2:+77020339 Msa1078130:CDS
TGACAACAGTCTCCACCACC+AGG 0.582793 7_2:-77020240 None:intergenic
GGAGACTGTTGTCAGAAAAG+AGG 0.585075 7_2:+77020249 Msa1078130:CDS
TCTAAAACTGAGATTGGACT+CGG 0.585099 7_2:-77019462 None:intergenic
GTGTCCAAGGAAACCAATGA+AGG 0.585519 7_2:-77019785 None:intergenic
ATGAAGGAGTTGACATCTAG+TGG 0.585872 7_2:+77020178 Msa1078130:CDS
GGCGCATGATATTAAGGACG+TGG 0.586726 7_2:+77017597 Msa1078130:CDS
AAGAGCAAGCATTTCGCCCA+AGG 0.589591 7_2:-77018073 None:intergenic
AGATGTTAATGAGAAGAAGA+TGG 0.591198 7_2:+77017186 Msa1078130:CDS
AGAGGTCGTGGGTAAAGGGT+GGG 0.591528 7_2:+77020267 Msa1078130:CDS
TGAACGACAGTCTACTCCAC+TGG 0.592190 7_2:+77017354 Msa1078130:CDS
TATTAGAGATTTCTTCACAT+CGG 0.593412 7_2:-77018097 None:intergenic
TGAGAGGTTACGTCAATCAA+AGG 0.594820 7_2:+77017255 Msa1078130:CDS
ACTATGTTCTCCCCGTGGAA+GGG 0.595388 7_2:-77016930 None:intergenic
GGAAGATAGGTTTATGGACA+AGG 0.597062 7_2:+77017036 Msa1078130:CDS
GTCCATTGGATCCAACATTG+AGG 0.598130 7_2:+77019921 Msa1078130:CDS
AAGGAATAAGAAATCAATCA+GGG 0.598628 7_2:+77018389 Msa1078130:CDS
ACCACTCTTCATACAGTCCA+AGG 0.602273 7_2:-77019520 None:intergenic
AGAAGGCTCCAAGGATCAGA+GGG 0.603284 7_2:+77020118 Msa1078130:CDS
ATACGCTTTGTCTCAGCCAG+TGG 0.605299 7_2:-77017370 None:intergenic
ACCCAAAAGTAATAAATGAG+TGG 0.605523 7_2:+77015228 None:intergenic
AATAGCTCGAACCCTCTCAT+GGG 0.606897 7_2:+77019721 Msa1078130:CDS
ATCAAATCCACCAATAGGGA+AGG 0.613133 7_2:-77020145 None:intergenic
GCGGTGTCAAGAATAATACA+AGG 0.614607 7_2:+77015876 Msa1078130:CDS
TTTGGGTGAAGGAAGTAGAG+GGG 0.616565 7_2:+77020317 Msa1078130:CDS
AGTGGTTGATTTGACAGGCA+GGG 0.618183 7_2:+77020369 Msa1078130:CDS
TGAAGCTTGTAATAATGATG+CGG 0.618394 7_2:+77018281 Msa1078130:CDS
TGGGATTTCGTCAATCGCTG+TGG 0.619476 7_2:+77017898 Msa1078130:CDS
CATAGACAGTGGAAGAAAGA+GGG 0.621894 7_2:-77018242 None:intergenic
CCAGTAGATCATCATCCTCA+GGG 0.624721 7_2:-77017675 None:intergenic
TGATCGGATAGAAGATAAGC+CGG 0.625000 7_2:+77016585 Msa1078130:CDS
CAGATCATGAGTGTACTGCT+GGG 0.625206 7_2:+77017830 Msa1078130:CDS
TCTACTGGAATCGAGAAAAG+TGG 0.627261 7_2:+77017690 Msa1078130:CDS
GTTGAATTGAATCCTTGATG+TGG 0.627761 7_2:+77020400 Msa1078130:three_prime_UTR
ATTGAAGCCAAGTTCTGTGA+GGG 0.629173 7_2:+77017576 Msa1078130:CDS
ATTGACCATGTCAAAGCCCA+GGG 0.629405 7_2:+77019407 Msa1078130:CDS
GGGTAAAGCACACGACTCCA+AGG 0.629521 7_2:+77018302 Msa1078130:CDS
TTCAATACCACTATTCGAGT+AGG 0.629879 7_2:-77017559 None:intergenic
GGATGATTCTTGTGCAGAGG+TGG 0.629970 7_2:+77019742 Msa1078130:CDS
ATGGGATGATTCTTGTGCAG+AGG 0.630661 7_2:+77019739 Msa1078130:CDS
GCCATGATGGCATCTAAGAA+GGG 0.632007 7_2:+77018015 Msa1078130:CDS
TGTATTCGATTATTAACACA+TGG 0.633419 7_2:+77020464 Msa1078130:three_prime_UTR
AGTTCTGTCTTGAACAAACA+AGG 0.634033 7_2:+77018591 Msa1078130:CDS
GGGAGAACATAGTTTAGCTG+TGG 0.635253 7_2:+77016940 Msa1078130:CDS
GTCATCGCCAATATAGCCCG+TGG 0.636861 7_2:-77017791 None:intergenic
GCTGAGAACAATCTCCTCCA+GGG 0.636927 7_2:-77016970 None:intergenic
TATTTGGGTGAAGGAAGTAG+AGG 0.639162 7_2:+77020315 Msa1078130:CDS
CGAGCTATTGATCCTATAGG+TGG 0.641808 7_2:-77019707 None:intergenic
GACATGTCTCAAAGCTTCAA+CGG 0.642119 7_2:+77018507 Msa1078130:CDS
GAGCCCATGTTCATAGACAG+TGG 0.647571 7_2:-77018253 None:intergenic
TCTCTGCATACTGACGACTC+AGG 0.647856 7_2:-77017964 None:intergenic
TTCAAGAACAAAGACATATG+CGG 0.648321 7_2:+77018040 Msa1078130:CDS
ACAAGGCGTAATATCTCTGG+AGG 0.651319 7_2:+77018608 Msa1078130:CDS
ACAAGAATCATCCCATGAGA+GGG 0.652020 7_2:-77019732 None:intergenic
AGAGAGAGAGCGAACCTGGG+AGG 0.652757 7_2:-77015403 None:intergenic
ATTGCTAGAAGAACTTGTGG+AGG 0.652817 7_2:+77020342 Msa1078130:CDS
ATGTCTCAAAGCTTCAACGG+TGG 0.653007 7_2:+77018510 Msa1078130:CDS
AGCAGATGCATGAAGAAGCG+AGG 0.653787 7_2:+77017728 Msa1078130:CDS
TCCTTGGACTGTATGAAGAG+TGG 0.654292 7_2:+77019519 Msa1078130:CDS
GTTGTCAGAAAAGAGGTCGT+GGG 0.654455 7_2:+77020256 Msa1078130:CDS
AGCGTCTGTCTACAGATGAG+AGG 0.655922 7_2:+77017239 Msa1078130:CDS
ACGAAGCAAAGCGAAGACAG+AGG 0.664130 7_2:+77019987 Msa1078130:CDS
GACACCGGAGAGACGGAAGT+GGG 0.664721 7_2:+77017159 Msa1078130:CDS
GGAAAATACTGAAGAATACA+CGG 0.665720 7_2:-77017770 None:intergenic
GCTGTGGAGAGAAGCCCTGG+AGG 0.667522 7_2:+77016956 Msa1078130:CDS
TGACTAGGTGTTAAAATGAG+CGG 0.670205 7_2:+77015857 Msa1078130:exon
ATTGGTTTCCTTGGACACGA+AGG 0.675866 7_2:+77019790 Msa1078130:CDS
AAGCAAAGCGAAGACAGAGG+AGG 0.676710 7_2:+77019990 Msa1078130:CDS
AGAACTTGTGGAGGATGCAG+TGG 0.678779 7_2:+77020351 Msa1078130:CDS
AGTTGACATCTAGTGGCATG+AGG 0.681876 7_2:+77020185 Msa1078130:CDS
GGCCTTGAAGCCCTTCCACG+GGG 0.685356 7_2:+77016920 Msa1078130:CDS
AGAGATGACCATGATGATCG+CGG 0.687608 7_2:-77016012 None:intergenic
TGGGGACAGCAACAGCCTGG+TGG 0.698797 7_2:+77020225 Msa1078130:CDS
CGGTGTCAAGAATAATACAA+GGG 0.705022 7_2:+77015877 Msa1078130:CDS
TATTGAAGCCAAGTTCTGTG+AGG 0.709640 7_2:+77017575 Msa1078130:CDS
TGACCATGATGATCGCGGTG+CGG 0.734287 7_2:-77016007 None:intergenic
AAACTTCTATCATGACCCTG+AGG 0.737959 7_2:+77017660 Msa1078130:CDS
CAATGTAAGAGACAAGACAC+CGG 0.748656 7_2:+77017144 Msa1078130:CDS
TGAGTCGTCAGTATGCAGAG+AGG 0.772849 7_2:+77017966 Msa1078130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTTTATGTTTTTTG+TGG + chr7_2:77015764-77015783 Msa1078130:intron 10.0%
!! TAATAATAATTAAAACTACA+AGG - chr7_2:77016255-77016274 None:intergenic 10.0%
!! TAGTAGTAGTAAAAATAAAA+GGG - chr7_2:77015573-77015592 None:intergenic 15.0%
!! ATAGTAGTAGTAAAAATAAA+AGG - chr7_2:77015574-77015593 None:intergenic 15.0%
!!! TTTCCTATTTTTTTAATAGT+GGG - chr7_2:77016295-77016314 None:intergenic 15.0%
!!! ATTTTTTTTTCCCATTTTTA+TGG + chr7_2:77016753-77016772 Msa1078130:intron 15.0%
!!! TTTTTTTTTCCCATTTTTAT+GGG + chr7_2:77016754-77016773 Msa1078130:intron 15.0%
!! ACAAAGATATTTATGAATTA+TGG + chr7_2:77017101-77017120 Msa1078130:CDS 15.0%
!! TTTAATAAATTAGGTTAAGT+AGG - chr7_2:77020491-77020510 None:intergenic 15.0%
!!! ATTCTTTATATACTTTGTTT+CGG - chr7_2:77020590-77020609 None:intergenic 15.0%
!!! ATGTTTTTGTGTCTTTTTTA+AGG + chr7_2:77015790-77015809 Msa1078130:intron 20.0%
!! TAACCCACTATTAAAAAAAT+AGG + chr7_2:77016289-77016308 Msa1078130:intron 20.0%
!!! CTTTCCTATTTTTTTAATAG+TGG - chr7_2:77016296-77016315 None:intergenic 20.0%
!! TAAAAAAAAAAGCAATTGAC+CGG - chr7_2:77016396-77016415 None:intergenic 20.0%
!! GTCTGTAATAATAATAATTG+TGG + chr7_2:77016430-77016449 Msa1078130:intron 20.0%
!! TCTTCAAATAAGAAAGTAAA+CGG + chr7_2:77016809-77016828 Msa1078130:CDS 20.0%
!! AATGAAAAATTCTGTAGAAA+GGG + chr7_2:77017424-77017443 Msa1078130:CDS 20.0%
!! AGTATGAAATCATCATTTAA+AGG + chr7_2:77018342-77018361 Msa1078130:CDS 20.0%
!! GTATGAAATCATCATTTAAA+GGG + chr7_2:77018343-77018362 Msa1078130:CDS 20.0%
!! TTGAAATTTCTTGTCATTAT+TGG + chr7_2:77019612-77019631 Msa1078130:intron 20.0%
!! TCAGTAGCATTTAATAAATT+AGG - chr7_2:77020500-77020519 None:intergenic 20.0%
!!! TAAAAGGGTTAGTTGATTTT+GGG - chr7_2:77015558-77015577 None:intergenic 25.0%
!!! ATAAAAGGGTTAGTTGATTT+TGG - chr7_2:77015559-77015578 None:intergenic 25.0%
! AAAAAACTGTAAATCTGAGA+AGG - chr7_2:77016038-77016057 None:intergenic 25.0%
! AAACCACAAACTAATGAATT+TGG - chr7_2:77016094-77016113 None:intergenic 25.0%
! ATTAAAACTACAAGGCAAAT+AGG - chr7_2:77016247-77016266 None:intergenic 25.0%
! AAAAAAAAAAGCAATTGACC+GGG - chr7_2:77016395-77016414 None:intergenic 25.0%
! ATAATGCAGTGAGATTAATA+TGG - chr7_2:77016494-77016513 None:intergenic 25.0%
!! ATTAATTTTGCAACCACATT+TGG - chr7_2:77016899-77016918 None:intergenic 25.0%
! AAATGTGGTTGCAAAATTAA+TGG + chr7_2:77016898-77016917 Msa1078130:CDS 25.0%
! AATGTGGTTGCAAAATTAAT+GGG + chr7_2:77016899-77016918 Msa1078130:CDS 25.0%
! CAATGAAAAATTCTGTAGAA+AGG + chr7_2:77017423-77017442 Msa1078130:CDS 25.0%
! ATTAAATAATGATGTTGCGT+GGG + chr7_2:77017477-77017496 Msa1078130:CDS 25.0%
! TATTAGAGATTTCTTCACAT+CGG - chr7_2:77018100-77018119 None:intergenic 25.0%
! AAGGAATAAGAAATCAATCA+GGG + chr7_2:77018389-77018408 Msa1078130:CDS 25.0%
! GAAATCCAAAATATGTTGTT+CGG + chr7_2:77018836-77018855 Msa1078130:intron 25.0%
! GTGTTAAGTGTTAATGAAAT+TGG + chr7_2:77019060-77019079 Msa1078130:intron 25.0%
!! TGTAAGCAAAACTATTTTCT+TGG + chr7_2:77019104-77019123 Msa1078130:intron 25.0%
!! GTAAGCAAAACTATTTTCTT+GGG + chr7_2:77019105-77019124 Msa1078130:intron 25.0%
!! TAAGCAAAACTATTTTCTTG+GGG + chr7_2:77019106-77019125 Msa1078130:intron 25.0%
! AATACCTGATGAATATCATA+GGG + chr7_2:77019162-77019181 Msa1078130:intron 25.0%
! AAATATGATCCAAGGATATA+TGG - chr7_2:77019299-77019318 None:intergenic 25.0%
! TTTGTTACAAATATGATCCA+AGG - chr7_2:77019307-77019326 None:intergenic 25.0%
! TGTATTCGATTATTAACACA+TGG + chr7_2:77020464-77020483 Msa1078130:three_prime_UTR 25.0%
ACAACAATGCAACTAACATA+AGG - chr7_2:77015672-77015691 None:intergenic 30.0%
AAGAGAACAGAAGTTAACAA+TGG - chr7_2:77015727-77015746 None:intergenic 30.0%
TTCTCTTAATTTCACGTGTT+TGG + chr7_2:77015740-77015759 Msa1078130:intron 30.0%
TTTGCATTTACAACAGTAGA+AGG - chr7_2:77015968-77015987 None:intergenic 30.0%
! CAACCAAATTCATTAGTTTG+TGG + chr7_2:77016088-77016107 Msa1078130:intron 30.0%
! AGTTTGTGGTTTTCTTTTGT+TGG + chr7_2:77016102-77016121 Msa1078130:intron 30.0%
! GTTTGTGGTTTTCTTTTGTT+GGG + chr7_2:77016103-77016122 Msa1078130:intron 30.0%
!!! TTGGGTTGTAGTATGTTTTT+TGG + chr7_2:77016121-77016140 Msa1078130:intron 30.0%
!!! TGGGTTGTAGTATGTTTTTT+GGG + chr7_2:77016122-77016141 Msa1078130:intron 30.0%
!!! TAGTATGTTTTTTGGGGTTA+TGG + chr7_2:77016129-77016148 Msa1078130:intron 30.0%
AACTCTATATTTCCCTAGTT+TGG + chr7_2:77016212-77016231 Msa1078130:intron 30.0%
AAGTCAGCTAAACACAAAAA+TGG - chr7_2:77016359-77016378 None:intergenic 30.0%
!!! ATAATTGTGGTTTTGTCTGT+TGG + chr7_2:77016443-77016462 Msa1078130:intron 30.0%
CAATTTCTTTGGACATTTCT+TGG - chr7_2:77016859-77016878 None:intergenic 30.0%
ATGCTTGGAAACAATTTCTT+TGG - chr7_2:77016870-77016889 None:intergenic 30.0%
AGATGTTAATGAGAAGAAGA+TGG + chr7_2:77017186-77017205 Msa1078130:CDS 30.0%
TCTTATACGCCAAAAATTCA+TGG + chr7_2:77017210-77017229 Msa1078130:CDS 30.0%
CTTTATTAACAGATCGTTGT+TGG - chr7_2:77017311-77017330 None:intergenic 30.0%
CGATCTGTTAATAAAGTTAC+TGG + chr7_2:77017315-77017334 Msa1078130:CDS 30.0%
! CATCTTTGAAGGTTTAAGAA+CGG - chr7_2:77017398-77017417 None:intergenic 30.0%
CACGCAACATCATTATTTAA+TGG - chr7_2:77017478-77017497 None:intergenic 30.0%
CATTAAATAATGATGTTGCG+TGG + chr7_2:77017476-77017495 Msa1078130:CDS 30.0%
GGAAAATACTGAAGAATACA+CGG - chr7_2:77017773-77017792 None:intergenic 30.0%
! GTATTCTTCAGTATTTTCCA+CGG + chr7_2:77017774-77017793 Msa1078130:CDS 30.0%
! TATTCTTCAGTATTTTCCAC+GGG + chr7_2:77017775-77017794 Msa1078130:CDS 30.0%
TTCAAGAACAAAGACATATG+CGG + chr7_2:77018040-77018059 Msa1078130:CDS 30.0%
TCTCTAATATCTGAGTTTGA+AGG + chr7_2:77018111-77018130 Msa1078130:CDS 30.0%
TGAAGCTTGTAATAATGATG+CGG + chr7_2:77018281-77018300 Msa1078130:CDS 30.0%
TTGCAAGTTTCTTATTCTCA+AGG + chr7_2:77018370-77018389 Msa1078130:CDS 30.0%
CAAGGAATAAGAAATCAATC+AGG + chr7_2:77018388-77018407 Msa1078130:CDS 30.0%
! ATTGTGCAAATTTTCTCCAT+TGG + chr7_2:77018662-77018681 Msa1078130:intron 30.0%
!! TTTATGAGTTAACTTGCCAA+TGG - chr7_2:77018681-77018700 None:intergenic 30.0%
! TACAACCGAACAACATATTT+TGG - chr7_2:77018844-77018863 None:intergenic 30.0%
AAATATGTTGTTCGGTTGTA+TGG + chr7_2:77018844-77018863 Msa1078130:intron 30.0%
GTTAATGAAATTGGATGACA+TGG + chr7_2:77019069-77019088 Msa1078130:intron 30.0%
! AACTATTTTCTTGGGGATTT+TGG + chr7_2:77019113-77019132 Msa1078130:intron 30.0%
GAATACCTGATGAATATCAT+AGG + chr7_2:77019161-77019180 Msa1078130:intron 30.0%
ACAGTCCTATTATTTATCAC+CGG - chr7_2:77019188-77019207 None:intergenic 30.0%
! ATAATAGGACTGTCTTTTCT+CGG + chr7_2:77019195-77019214 Msa1078130:intron 30.0%
AACTTAATGCCATATATCCT+TGG + chr7_2:77019287-77019306 Msa1078130:intron 30.0%
ACTTTATATGTACTCGAAGT+TGG + chr7_2:77019328-77019347 Msa1078130:intron 30.0%
AAGAACATGCTAAAATAGCA+AGG - chr7_2:77019590-77019609 None:intergenic 30.0%
TCGAATGTTATCTATTCTGT+AGG + chr7_2:77019644-77019663 Msa1078130:intron 30.0%
TTATCTATTCTGTAGGATCA+CGG + chr7_2:77019651-77019670 Msa1078130:intron 30.0%
! AATGAAGGCTTTAATTGGTA+CGG - chr7_2:77019773-77019792 None:intergenic 30.0%
! AAACCAATGAAGGCTTTAAT+TGG - chr7_2:77019778-77019797 None:intergenic 30.0%
! CTAATGGAAATTACTGGTTA+CGG + chr7_2:77020052-77020071 Msa1078130:CDS 30.0%
GGATTAGAAAGTTCCTTAAT+GGG + chr7_2:77020073-77020092 Msa1078130:CDS 30.0%
TACAATCAAATCCACCAATA+GGG - chr7_2:77020152-77020171 None:intergenic 30.0%
ATACAATCAAATCCACCAAT+AGG - chr7_2:77020153-77020172 None:intergenic 30.0%
TTTGATTGTATCCCATATGA+AGG + chr7_2:77020162-77020181 Msa1078130:CDS 30.0%
! TGGGATTTGAAATGGATATT+TGG + chr7_2:77020299-77020318 Msa1078130:CDS 30.0%
! GGGATTTGAAATGGATATTT+GGG + chr7_2:77020300-77020319 Msa1078130:CDS 30.0%
CAGAGGTGAAGATATTTAAT+AGG - chr7_2:77020567-77020586 None:intergenic 30.0%
AAGGAAAAGGAGAGAAGAAA+GGG - chr7_2:77015439-77015458 None:intergenic 35.0%
AAAGGAAAAGGAGAGAAGAA+AGG - chr7_2:77015440-77015459 None:intergenic 35.0%
!! GGTTAGTTGATTTTGGGAAA+AGG - chr7_2:77015552-77015571 None:intergenic 35.0%
! TCTACCTTTTCTTCTTCTTC+TGG + chr7_2:77015630-77015649 Msa1078130:intron 35.0%
! CTACCTTTTCTTCTTCTTCT+GGG + chr7_2:77015631-77015650 Msa1078130:intron 35.0%
ATACCCAGAAGAAGAAGAAA+AGG - chr7_2:77015637-77015656 None:intergenic 35.0%
! ATTGTTGTTCATTCCCTCTT+TGG + chr7_2:77015684-77015703 Msa1078130:intron 35.0%
ACAAGAACATCATGGTTAGT+TGG - chr7_2:77015832-77015851 None:intergenic 35.0%
TAACCATGATGTTCTTGTGT+AGG + chr7_2:77015834-77015853 Msa1078130:intron 35.0%
TGACTAGGTGTTAAAATGAG+CGG + chr7_2:77015857-77015876 Msa1078130:exon 35.0%
! CGGTGTCAAGAATAATACAA+GGG + chr7_2:77015877-77015896 Msa1078130:CDS 35.0%
!!! GGGTTGTAGTATGTTTTTTG+GGG + chr7_2:77016123-77016142 Msa1078130:intron 35.0%
TGGTACACTATAGAGAATAG+TGG + chr7_2:77016149-77016168 Msa1078130:intron 35.0%
GGTACACTATAGAGAATAGT+GGG + chr7_2:77016150-77016169 Msa1078130:intron 35.0%
!! ATAGTGGGTTATTTGCTTGT+AGG + chr7_2:77016165-77016184 Msa1078130:intron 35.0%
!! GCTTGTAGGTGTTGATTAAT+AGG + chr7_2:77016179-77016198 Msa1078130:intron 35.0%
! TAGGAAAGTGAGTTGAGTTA+TGG + chr7_2:77016308-77016327 Msa1078130:intron 35.0%
GACTTTAGCATCATAAAACC+CGG + chr7_2:77016374-77016393 Msa1078130:intron 35.0%
!! TTTTTGTCGATTGAGTTTGC+TGG + chr7_2:77016633-77016652 Msa1078130:intron 35.0%
!! TTTTGTCGATTGAGTTTGCT+GGG + chr7_2:77016634-77016653 Msa1078130:intron 35.0%
! AACGAGATGATAGTGTCATA+TGG + chr7_2:77016680-77016699 Msa1078130:intron 35.0%
TCTGCAAAGCCCATAAAAAT+GGG - chr7_2:77016766-77016785 None:intergenic 35.0%
ATCTGCAAAGCCCATAAAAA+TGG - chr7_2:77016767-77016786 None:intergenic 35.0%
! AATTTTGCAACCACATTTGG+TGG - chr7_2:77016896-77016915 None:intergenic 35.0%
! GCTTTGCTTCCATGAATTTT+TGG - chr7_2:77017222-77017241 None:intergenic 35.0%
GTTGGAGCTTAAAACTTCTA+AGG - chr7_2:77017293-77017312 None:intergenic 35.0%
CGTTCTTAAACCTTCAAAGA+TGG + chr7_2:77017396-77017415 Msa1078130:CDS 35.0%
TCATTGTCAACCATCTTTGA+AGG - chr7_2:77017409-77017428 None:intergenic 35.0%
TTCAATACCACTATTCGAGT+AGG - chr7_2:77017562-77017581 None:intergenic 35.0%
!!! TTTTGAGGTGATGATACTGT+TGG - chr7_2:77017628-77017647 None:intergenic 35.0%
! TTTCCACTTTGCAGATTTTG+AGG - chr7_2:77017643-77017662 None:intergenic 35.0%
AATACACGGTTTCATCTCTT+TGG - chr7_2:77017759-77017778 None:intergenic 35.0%
!! TGCTGGGAATTTTAGTGATT+TGG + chr7_2:77017846-77017865 Msa1078130:CDS 35.0%
TCTTTCAGAAAGTCGTTTCT+TGG - chr7_2:77017992-77018011 None:intergenic 35.0%
! AGAAACGACTTTCTGAAAGA+TGG + chr7_2:77017992-77018011 Msa1078130:CDS 35.0%
! GAAACGACTTTCTGAAAGAT+GGG + chr7_2:77017993-77018012 Msa1078130:CDS 35.0%
CTGCAAGAAACAGATTCATT+CGG - chr7_2:77018156-77018175 None:intergenic 35.0%
GAAGCTTGTAATAATGATGC+GGG + chr7_2:77018282-77018301 Msa1078130:CDS 35.0%
! TGTTTCTGCAACAGTTGATT+GGG - chr7_2:77018448-77018467 None:intergenic 35.0%
! ATGTTTCTGCAACAGTTGAT+TGG - chr7_2:77018449-77018468 None:intergenic 35.0%
! TTTGAGACATGTCATTCCTA+AGG - chr7_2:77018500-77018519 None:intergenic 35.0%
TCCAACTCTTTGTGAATCAT+CGG + chr7_2:77018554-77018573 Msa1078130:CDS 35.0%
TTGTTTGTTCAAGACAGAAC+TGG - chr7_2:77018592-77018611 None:intergenic 35.0%
AGTTCTGTCTTGAACAAACA+AGG + chr7_2:77018591-77018610 Msa1078130:CDS 35.0%
GGCAAAAGGGAAAGAAAAAT+GGG + chr7_2:77018763-77018782 Msa1078130:intron 35.0%
! CTGTCATTTAATCTGTGTCT+AGG + chr7_2:77018871-77018890 Msa1078130:intron 35.0%
TACAACAGTGCAAGTTTCAA+GGG - chr7_2:77019001-77019020 None:intergenic 35.0%
AATGAAATTGGATGACATGG+TGG + chr7_2:77019072-77019091 Msa1078130:intron 35.0%
TCGACAACAAGAAATCAAAG+AGG - chr7_2:77019251-77019270 None:intergenic 35.0%
!! ACTCGAAGTTGGTAAGTAAA+TGG + chr7_2:77019339-77019358 Msa1078130:intron 35.0%
!! AAGTTGGTAAGTAAATGGAC+TGG + chr7_2:77019344-77019363 Msa1078130:intron 35.0%
! TCTAAAACTGAGATTGGACT+CGG - chr7_2:77019465-77019484 None:intergenic 35.0%
! GCATTTTCATCTTCAAATGG+AGG - chr7_2:77019489-77019508 None:intergenic 35.0%
! GCTGCATTTTCATCTTCAAA+TGG - chr7_2:77019492-77019511 None:intergenic 35.0%
ACATGCTAAAATAGCAAGGT+CGG - chr7_2:77019586-77019605 None:intergenic 35.0%
TATCTATTCTGTAGGATCAC+GGG + chr7_2:77019652-77019671 Msa1078130:intron 35.0%
ATTGACAAATCACCACCTAT+AGG + chr7_2:77019695-77019714 Msa1078130:CDS 35.0%
GTACCAATTAAAGCCTTCAT+TGG + chr7_2:77019772-77019791 Msa1078130:CDS 35.0%
! CATCTAGAATAAAACGAGTC+AGG - chr7_2:77019887-77019906 None:intergenic 35.0%
!! CTGACTCGTTTTATTCTAGA+TGG + chr7_2:77019885-77019904 Msa1078130:CDS 35.0%
AGGTTCATTGTCATTGAGAT+TGG - chr7_2:77019957-77019976 None:intergenic 35.0%
TTGTGTCAATGTTGCACTAA+TGG + chr7_2:77020036-77020055 Msa1078130:CDS 35.0%
GTTGCACTAATGGAAATTAC+TGG + chr7_2:77020046-77020065 Msa1078130:CDS 35.0%
! CGGATTAGAAAGTTCCTTAA+TGG + chr7_2:77020072-77020091 Msa1078130:CDS 35.0%
AGATGTCAACTCCTTCATAT+GGG - chr7_2:77020176-77020195 None:intergenic 35.0%
TAGATGTCAACTCCTTCATA+TGG - chr7_2:77020177-77020196 None:intergenic 35.0%
TGAGCTTATGGGATTTGAAA+TGG + chr7_2:77020291-77020310 Msa1078130:CDS 35.0%
TGAAATGGATATTTGGGTGA+AGG + chr7_2:77020306-77020325 Msa1078130:CDS 35.0%
GAAATTGCTAGAAGAACTTG+TGG + chr7_2:77020339-77020358 Msa1078130:CDS 35.0%
GTTGAATTGAATCCTTGATG+TGG + chr7_2:77020400-77020419 Msa1078130:three_prime_UTR 35.0%
! TATATACTTTGTTTCGGCAG+AGG - chr7_2:77020584-77020603 None:intergenic 35.0%
GGGAAGAAGATAGTCAGAAA+AGG + chr7_2:77015254-77015273 Msa1078130:five_prime_UTR 40.0%
!! TGGGTTAGCTTAGCTAAGTT+AGG - chr7_2:77015316-77015335 None:intergenic 40.0%
! ATCTGGAATCTGGAAGGAAA+GGG - chr7_2:77015483-77015502 None:intergenic 40.0%
! ACATTGATCTGGAATCTGGA+AGG - chr7_2:77015489-77015508 None:intergenic 40.0%
! AACGACATTGATCTGGAATC+TGG - chr7_2:77015493-77015512 None:intergenic 40.0%
AATGAAACGCGGTGAAGAAA+GGG - chr7_2:77015519-77015538 None:intergenic 40.0%
GATAGCAACAGAATGAAACG+CGG - chr7_2:77015530-77015549 None:intergenic 40.0%
TGAAAGACGAGATCCAAAGA+GGG - chr7_2:77015700-77015719 None:intergenic 40.0%
! ACATCATGGTTAGTTGGTTG+TGG - chr7_2:77015826-77015845 None:intergenic 40.0%
TCACCTACACAAGAACATCA+TGG - chr7_2:77015840-77015859 None:intergenic 40.0%
ATGTTCTTGTGTAGGTGACT+AGG + chr7_2:77015842-77015861 Msa1078130:intron 40.0%
! GCGGTGTCAAGAATAATACA+AGG + chr7_2:77015876-77015895 Msa1078130:CDS 40.0%
! AAACCTTTTCCTGGATGTCT+GGG + chr7_2:77015914-77015933 Msa1078130:CDS 40.0%
! AGGAAAGTGCAACCAAACTA+GGG - chr7_2:77016227-77016246 None:intergenic 40.0%
! TAGGAAAGTGCAACCAAACT+AGG - chr7_2:77016228-77016247 None:intergenic 40.0%
GAAGTCAATCAGATGTTTCG+AGG + chr7_2:77016542-77016561 Msa1078130:CDS 40.0%
! CAAGTCCTTCATTTGGTGAT+CGG + chr7_2:77016569-77016588 Msa1078130:CDS 40.0%
TCTATCCGATCACCAAATGA+AGG - chr7_2:77016577-77016596 None:intergenic 40.0%
TGATCGGATAGAAGATAAGC+CGG + chr7_2:77016585-77016604 Msa1078130:CDS 40.0%
TAGAAGATAAGCCGGTAAGT+TGG + chr7_2:77016593-77016612 Msa1078130:intron 40.0%
AGTAATCCTCTCCAACTTAC+CGG - chr7_2:77016607-77016626 None:intergenic 40.0%
AACACCCATCAAGATGCTTA+TGG + chr7_2:77016832-77016851 Msa1078130:CDS 40.0%
TGGTCCATAAGCATCTTGAT+GGG - chr7_2:77016839-77016858 None:intergenic 40.0%
TTGGTCCATAAGCATCTTGA+TGG - chr7_2:77016840-77016859 None:intergenic 40.0%
CTGCGACATCATTCAATCAT+TGG + chr7_2:77017008-77017027 Msa1078130:CDS 40.0%
ATCATTCAATCATTGGCAGC+TGG + chr7_2:77017015-77017034 Msa1078130:CDS 40.0%
GGAAGATAGGTTTATGGACA+AGG + chr7_2:77017036-77017055 Msa1078130:CDS 40.0%
CAATGTAAGAGACAAGACAC+CGG + chr7_2:77017144-77017163 Msa1078130:CDS 40.0%
TGAGAGGTTACGTCAATCAA+AGG + chr7_2:77017255-77017274 Msa1078130:CDS 40.0%
! AAACTCATCAACTTTCTGGC+TGG - chr7_2:77017530-77017549 None:intergenic 40.0%
CAGCAAACTCATCAACTTTC+TGG - chr7_2:77017534-77017553 None:intergenic 40.0%
TGTTCAACCTACTCGAATAG+TGG + chr7_2:77017552-77017571 Msa1078130:CDS 40.0%
TATTGAAGCCAAGTTCTGTG+AGG + chr7_2:77017575-77017594 Msa1078130:CDS 40.0%
ATTGAAGCCAAGTTCTGTGA+GGG + chr7_2:77017576-77017595 Msa1078130:CDS 40.0%
TCACCTCAAAATCTGCAAAG+TGG + chr7_2:77017637-77017656 Msa1078130:CDS 40.0%
AAACTTCTATCATGACCCTG+AGG + chr7_2:77017660-77017679 Msa1078130:CDS 40.0%
TCTACTGGAATCGAGAAAAG+TGG + chr7_2:77017690-77017709 Msa1078130:CDS 40.0%
!! GTATTTTCCACGGGCTATAT+TGG + chr7_2:77017784-77017803 Msa1078130:CDS 40.0%
ACCATCTCCAAGACATTCTT+GGG + chr7_2:77017879-77017898 Msa1078130:CDS 40.0%
ACGAAATCCCAAGAATGTCT+TGG - chr7_2:77017889-77017908 None:intergenic 40.0%
CTGAAGGATGAAGACGAATA+AGG - chr7_2:77017928-77017947 None:intergenic 40.0%
AATGAAGAAATACGCGCAGA+TGG + chr7_2:77018186-77018205 Msa1078130:CDS 40.0%
! TTTGACCTGGGAAGGTTTTT+AGG - chr7_2:77018216-77018235 None:intergenic 40.0%
CATAGACAGTGGAAGAAAGA+GGG - chr7_2:77018245-77018264 None:intergenic 40.0%
TCATAGACAGTGGAAGAAAG+AGG - chr7_2:77018246-77018265 None:intergenic 40.0%
TCTTCCACTGTCTATGAACA+TGG + chr7_2:77018249-77018268 Msa1078130:CDS 40.0%
CTTCCACTGTCTATGAACAT+GGG + chr7_2:77018250-77018269 Msa1078130:CDS 40.0%
AGGACTTCAGGTGAGTTTAT+TGG - chr7_2:77018480-77018499 None:intergenic 40.0%
TAAACTCACCTGAAGTCCTT+AGG + chr7_2:77018481-77018500 Msa1078130:CDS 40.0%
ATGTCATTCCTAAGGACTTC+AGG - chr7_2:77018492-77018511 None:intergenic 40.0%
GACATGTCTCAAAGCTTCAA+CGG + chr7_2:77018507-77018526 Msa1078130:CDS 40.0%
CCAACTCTTTGTGAATCATC+GGG + chr7_2:77018555-77018574 Msa1078130:CDS 40.0%
CAAACAAGGCGTAATATCTC+TGG + chr7_2:77018605-77018624 Msa1078130:CDS 40.0%
GTTGAGCAACTAAGAAAAGG+TGG - chr7_2:77018718-77018737 None:intergenic 40.0%
GGGCAAAAGGGAAAGAAAAA+TGG + chr7_2:77018762-77018781 Msa1078130:intron 40.0%
CTACAACAGTGCAAGTTTCA+AGG - chr7_2:77019002-77019021 None:intergenic 40.0%
! TCGTATGTGTTGTTGCTTCA+TGG + chr7_2:77019028-77019047 Msa1078130:intron 40.0%
!! TTGGGGATTTTGGTATGTGT+CGG + chr7_2:77019123-77019142 Msa1078130:intron 40.0%
TAGGGCCGGTGATAAATAAT+AGG + chr7_2:77019180-77019199 Msa1078130:intron 40.0%
! TGGTTTTCACTGGAAATCCA+TGG - chr7_2:77019435-77019454 None:intergenic 40.0%
ATGGATTTCCAGTGAAAACC+AGG + chr7_2:77019434-77019453 Msa1078130:CDS 40.0%
!! GGAGGTTCTAAAACTGAGAT+TGG - chr7_2:77019471-77019490 None:intergenic 40.0%
CATGCTAAAATAGCAAGGTC+GGG - chr7_2:77019585-77019604 None:intergenic 40.0%
GTTCGAGCTATTGATCCTAT+AGG - chr7_2:77019713-77019732 None:intergenic 40.0%
ACAAGAATCATCCCATGAGA+GGG - chr7_2:77019735-77019754 None:intergenic 40.0%
!! AAAGCCTTCATTGGTTTCCT+TGG + chr7_2:77019781-77019800 Msa1078130:CDS 40.0%
CAGAAATTACTATCAGCTGC+TGG + chr7_2:77019842-77019861 Msa1078130:CDS 40.0%
GCATTCTCTTGAAAGTCCAT+TGG + chr7_2:77019907-77019926 Msa1078130:CDS 40.0%
TCCATTGGATCCAACATTGA+GGG + chr7_2:77019922-77019941 Msa1078130:CDS 40.0%
! TAGAAAGTTCCTTAATGGGC+AGG + chr7_2:77020077-77020096 Msa1078130:CDS 40.0%
ATCAAATCCACCAATAGGGA+AGG - chr7_2:77020148-77020167 None:intergenic 40.0%
ATGAAGGAGTTGACATCTAG+TGG + chr7_2:77020178-77020197 Msa1078130:CDS 40.0%
TATTTGGGTGAAGGAAGTAG+AGG + chr7_2:77020315-77020334 Msa1078130:CDS 40.0%
ATTTGGGTGAAGGAAGTAGA+GGG + chr7_2:77020316-77020335 Msa1078130:CDS 40.0%
ATTGCTAGAAGAACTTGTGG+AGG + chr7_2:77020342-77020361 Msa1078130:CDS 40.0%
AAAGAGAGAGAGAGAGAGAG+CGG - chr7_2:77015350-77015369 None:intergenic 45.0%
GTGGAGGGAGAAAAAGGAAA+AGG - chr7_2:77015452-77015471 None:intergenic 45.0%
! TCTGGAATCTGGAAGGAAAG+GGG - chr7_2:77015482-77015501 None:intergenic 45.0%
! GATCTGGAATCTGGAAGGAA+AGG - chr7_2:77015484-77015503 None:intergenic 45.0%
AGGGGAAAACGACATTGATC+TGG - chr7_2:77015500-77015519 None:intergenic 45.0%
ATGAAACGCGGTGAAGAAAG+GGG - chr7_2:77015518-77015537 None:intergenic 45.0%
GAATGAAACGCGGTGAAGAA+AGG - chr7_2:77015520-77015539 None:intergenic 45.0%
GTGAAAGACGAGATCCAAAG+AGG - chr7_2:77015701-77015720 None:intergenic 45.0%
! GCTGATGACAAACCTTTTCC+TGG + chr7_2:77015905-77015924 Msa1078130:CDS 45.0%
! CAAACCTTTTCCTGGATGTC+TGG + chr7_2:77015913-77015932 Msa1078130:CDS 45.0%
AGAGATGACCATGATGATCG+CGG - chr7_2:77016015-77016034 None:intergenic 45.0%
AGGACTGCAAGTCCTTCATT+TGG + chr7_2:77016562-77016581 Msa1078130:CDS 45.0%
AACAAGTACAGCAAAGCACG+TGG - chr7_2:77016730-77016749 None:intergenic 45.0%
!! CACATTTGGTGGACTATGCT+TGG - chr7_2:77016885-77016904 None:intergenic 45.0%
CAAGCATAGTCCACCAAATG+TGG + chr7_2:77016883-77016902 Msa1078130:CDS 45.0%
GGGAGAACATAGTTTAGCTG+TGG + chr7_2:77016940-77016959 Msa1078130:CDS 45.0%
ATCATTGGCAGCTGGAAGAT+AGG + chr7_2:77017023-77017042 Msa1078130:CDS 45.0%
GCAGCTGGAAGATAGGTTTA+TGG + chr7_2:77017030-77017049 Msa1078130:CDS 45.0%
TAAGCAACCTGTTCTCTGCT+CGG - chr7_2:77017082-77017101 None:intergenic 45.0%
! TGTGAGGGCGCATGATATTA+AGG + chr7_2:77017591-77017610 Msa1078130:CDS 45.0%
CCAGTAGATCATCATCCTCA+GGG - chr7_2:77017678-77017697 None:intergenic 45.0%
TCCAGTAGATCATCATCCTC+AGG - chr7_2:77017679-77017698 None:intergenic 45.0%
TCAGATCATGAGTGTACTGC+TGG + chr7_2:77017829-77017848 Msa1078130:CDS 45.0%
CAGATCATGAGTGTACTGCT+GGG + chr7_2:77017830-77017849 Msa1078130:CDS 45.0%
CACCATCTCCAAGACATTCT+TGG + chr7_2:77017878-77017897 Msa1078130:CDS 45.0%
TCCCAAGAATGTCTTGGAGA+TGG - chr7_2:77017883-77017902 None:intergenic 45.0%
! TTCTGAAAGATGGGCCATGA+TGG + chr7_2:77018002-77018021 Msa1078130:CDS 45.0%
GCCATGATGGCATCTAAGAA+GGG + chr7_2:77018015-77018034 Msa1078130:CDS 45.0%
ACCCTTCTTAGATGCCATCA+TGG - chr7_2:77018019-77018038 None:intergenic 45.0%
GTTCTCCTAAAAACCTTCCC+AGG + chr7_2:77018208-77018227 Msa1078130:CDS 45.0%
!! AGAGGGACAGATTTTGACCT+GGG - chr7_2:77018228-77018247 None:intergenic 45.0%
!! AAGAGGGACAGATTTTGACC+TGG - chr7_2:77018229-77018248 None:intergenic 45.0%
! CTTTGACTTTGTCAGCTCCT+TGG - chr7_2:77018322-77018341 None:intergenic 45.0%
ATGTCTCAAAGCTTCAACGG+TGG + chr7_2:77018510-77018529 Msa1078130:CDS 45.0%
CCCGATGATTCACAAAGAGT+TGG - chr7_2:77018558-77018577 None:intergenic 45.0%
ACAAGGCGTAATATCTCTGG+AGG + chr7_2:77018608-77018627 Msa1078130:CDS 45.0%
GGGGTTGAGCAACTAAGAAA+AGG - chr7_2:77018721-77018740 None:intergenic 45.0%
AGCACAAACTTACGTCTGGA+TGG - chr7_2:77018952-77018971 None:intergenic 45.0%
! AGAGAGCACAAACTTACGTC+TGG - chr7_2:77018956-77018975 None:intergenic 45.0%
GAAATTGGATGACATGGTGG+CGG + chr7_2:77019075-77019094 Msa1078130:intron 45.0%
AAATTGGATGACATGGTGGC+GGG + chr7_2:77019076-77019095 Msa1078130:intron 45.0%
CCTGATGAATATCATAGGGC+CGG + chr7_2:77019166-77019185 Msa1078130:intron 45.0%
! GGCTTTGACATGGTCAATTC+AGG - chr7_2:77019405-77019424 None:intergenic 45.0%
AATTGACCATGTCAAAGCCC+AGG + chr7_2:77019406-77019425 Msa1078130:CDS 45.0%
ATTGACCATGTCAAAGCCCA+GGG + chr7_2:77019407-77019426 Msa1078130:CDS 45.0%
AAATGCAGCTCATGAGTCCT+TGG + chr7_2:77019503-77019522 Msa1078130:CDS 45.0%
TCCTTGGACTGTATGAAGAG+TGG + chr7_2:77019519-77019538 Msa1078130:CDS 45.0%
ACCACTCTTCATACAGTCCA+AGG - chr7_2:77019523-77019542 None:intergenic 45.0%
TGTATGAAGAGTGGTCAGCT+TGG + chr7_2:77019528-77019547 Msa1078130:CDS 45.0%
CGAGCTATTGATCCTATAGG+TGG - chr7_2:77019710-77019729 None:intergenic 45.0%
AATAGCTCGAACCCTCTCAT+GGG + chr7_2:77019721-77019740 Msa1078130:CDS 45.0%
CACAAGAATCATCCCATGAG+AGG - chr7_2:77019736-77019755 None:intergenic 45.0%
ATGGGATGATTCTTGTGCAG+AGG + chr7_2:77019739-77019758 Msa1078130:CDS 45.0%
GTGTCCAAGGAAACCAATGA+AGG - chr7_2:77019788-77019807 None:intergenic 45.0%
! ATTGGTTTCCTTGGACACGA+AGG + chr7_2:77019790-77019809 Msa1078130:CDS 45.0%
GTCCATTGGATCCAACATTG+AGG + chr7_2:77019921-77019940 Msa1078130:CDS 45.0%
TCCCTCAATGTTGGATCCAA+TGG - chr7_2:77019926-77019945 None:intergenic 45.0%
GCGTATTTGTCCCTCAATGT+TGG - chr7_2:77019935-77019954 None:intergenic 45.0%
TTTGCTTCGTGTACAGGTTG+AGG - chr7_2:77019977-77019996 None:intergenic 45.0%
AGTTGACATCTAGTGGCATG+AGG + chr7_2:77020185-77020204 Msa1078130:CDS 45.0%
TAGTGGCATGAGGTCTGTTT+GGG + chr7_2:77020195-77020214 Msa1078130:CDS 45.0%
GGAGACTGTTGTCAGAAAAG+AGG + chr7_2:77020249-77020268 Msa1078130:CDS 45.0%
TGTTGTCAGAAAAGAGGTCG+TGG + chr7_2:77020255-77020274 Msa1078130:CDS 45.0%
GTTGTCAGAAAAGAGGTCGT+GGG + chr7_2:77020256-77020275 Msa1078130:CDS 45.0%
AGAAAAGAGGTCGTGGGTAA+AGG + chr7_2:77020262-77020281 Msa1078130:CDS 45.0%
GAAAAGAGGTCGTGGGTAAA+GGG + chr7_2:77020263-77020282 Msa1078130:CDS 45.0%
!! TAAAGGGTGGGTTGAGCTTA+TGG + chr7_2:77020279-77020298 Msa1078130:CDS 45.0%
!! AAAGGGTGGGTTGAGCTTAT+GGG + chr7_2:77020280-77020299 Msa1078130:CDS 45.0%
TTTGGGTGAAGGAAGTAGAG+GGG + chr7_2:77020317-77020336 Msa1078130:CDS 45.0%
!! GATGCAGTGGTTGATTTGAC+AGG + chr7_2:77020364-77020383 Msa1078130:CDS 45.0%
!! AGTGGTTGATTTGACAGGCA+GGG + chr7_2:77020369-77020388 Msa1078130:CDS 45.0%
CAAAGCAGTAAGCCACATCA+AGG - chr7_2:77020415-77020434 None:intergenic 45.0%
ATGTCGGTGGAGGGAGAAAA+AGG - chr7_2:77015458-77015477 None:intergenic 50.0%
CTGGAAGGAAAGGGGAATGT+CGG - chr7_2:77015474-77015493 None:intergenic 50.0%
CTTCCCAGACATCCAGGAAA+AGG - chr7_2:77015920-77015939 None:intergenic 50.0%
TCCTGGATGTCTGGGAAGAA+TGG + chr7_2:77015922-77015941 Msa1078130:CDS 50.0%
ACCATTCTTCCCAGACATCC+AGG - chr7_2:77015926-77015945 None:intergenic 50.0%
ATGATCGCGGTGCGGTTTAT+CGG - chr7_2:77016002-77016021 None:intergenic 50.0%
! GATAAGCCGGTAAGTTGGAG+AGG + chr7_2:77016598-77016617 Msa1078130:intron 50.0%
ACTATGTTCTCCCCGTGGAA+GGG - chr7_2:77016933-77016952 None:intergenic 50.0%
AACTATGTTCTCCCCGTGGA+AGG - chr7_2:77016934-77016953 None:intergenic 50.0%
GCTAAACTATGTTCTCCCCG+TGG - chr7_2:77016938-77016957 None:intergenic 50.0%
GCTGAGAACAATCTCCTCCA+GGG - chr7_2:77016973-77016992 None:intergenic 50.0%
TGCTGAGAACAATCTCCTCC+AGG - chr7_2:77016974-77016993 None:intergenic 50.0%
AGTTCATCCGAGCAGAGAAC+AGG + chr7_2:77017072-77017091 Msa1078130:CDS 50.0%
AGCGTCTGTCTACAGATGAG+AGG + chr7_2:77017239-77017258 Msa1078130:CDS 50.0%
TGAACGACAGTCTACTCCAC+TGG + chr7_2:77017354-77017373 Msa1078130:CDS 50.0%
ATACGCTTTGTCTCAGCCAG+TGG - chr7_2:77017373-77017392 None:intergenic 50.0%
GCGTGGGAGAAAAATAGTCC+TGG + chr7_2:77017493-77017512 Msa1078130:CDS 50.0%
!! TCATCAACTTTCTGGCTGGC+TGG - chr7_2:77017526-77017545 None:intergenic 50.0%
GGCGCATGATATTAAGGACG+TGG + chr7_2:77017597-77017616 Msa1078130:CDS 50.0%
CCCTGAGGATGATGATCTAC+TGG + chr7_2:77017675-77017694 Msa1078130:CDS 50.0%
AGCAGATGCATGAAGAAGCG+AGG + chr7_2:77017728-77017747 Msa1078130:CDS 50.0%
TGGGATTTCGTCAATCGCTG+TGG + chr7_2:77017898-77017917 Msa1078130:CDS 50.0%
TACTGACGACTCAGGAGAAC+AGG - chr7_2:77017959-77017978 None:intergenic 50.0%
TCTCTGCATACTGACGACTC+AGG - chr7_2:77017967-77017986 None:intergenic 50.0%
TGAGTCGTCAGTATGCAGAG+AGG + chr7_2:77017966-77017985 Msa1078130:CDS 50.0%
GGCCATGATGGCATCTAAGA+AGG + chr7_2:77018014-77018033 Msa1078130:CDS 50.0%
TATGCGGAGAAGCTCTACCT+TGG + chr7_2:77018056-77018075 Msa1078130:CDS 50.0%
ATGCGGAGAAGCTCTACCTT+GGG + chr7_2:77018057-77018076 Msa1078130:CDS 50.0%
AAGAGCAAGCATTTCGCCCA+AGG - chr7_2:77018076-77018095 None:intergenic 50.0%
!! GGACAGATTTTGACCTGGGA+AGG - chr7_2:77018224-77018243 None:intergenic 50.0%
GAGCCCATGTTCATAGACAG+TGG - chr7_2:77018256-77018275 None:intergenic 50.0%
! TTCCCTTTTGCCCTATCGCA+GGG - chr7_2:77018755-77018774 None:intergenic 50.0%
! TTTCCCTTTTGCCCTATCGC+AGG - chr7_2:77018756-77018775 None:intergenic 50.0%
ACGTCTGGATGGTGAAGAAG+TGG - chr7_2:77018941-77018960 None:intergenic 50.0%
CCGGCCCTATGATATTCATC+AGG - chr7_2:77019169-77019188 None:intergenic 50.0%
CAATAGCTCGAACCCTCTCA+TGG + chr7_2:77019720-77019739 Msa1078130:CDS 50.0%
GGATGATTCTTGTGCAGAGG+TGG + chr7_2:77019742-77019761 Msa1078130:CDS 50.0%
TTCCTTGGACACGAAGGTAG+AGG + chr7_2:77019796-77019815 Msa1078130:CDS 50.0%
ATCCTCTACCTTCGTGTCCA+AGG - chr7_2:77019801-77019820 None:intergenic 50.0%
CTTCGCTTTGCTTCGTGTAC+AGG - chr7_2:77019983-77020002 None:intergenic 50.0%
ACGAAGCAAAGCGAAGACAG+AGG + chr7_2:77019987-77020006 Msa1078130:CDS 50.0%
AAGCAAAGCGAAGACAGAGG+AGG + chr7_2:77019990-77020009 Msa1078130:CDS 50.0%
! GTTCCTTAATGGGCAGGTTG+TGG + chr7_2:77020083-77020102 Msa1078130:CDS 50.0%
ACTCCACAACCTGCCCATTA+AGG - chr7_2:77020089-77020108 None:intergenic 50.0%
! TTAATGGGCAGGTTGTGGAG+TGG + chr7_2:77020088-77020107 Msa1078130:CDS 50.0%
! TAATGGGCAGGTTGTGGAGT+GGG + chr7_2:77020089-77020108 Msa1078130:CDS 50.0%
AGAAGGCTCCAAGGATCAGA+GGG + chr7_2:77020118-77020137 Msa1078130:CDS 50.0%
CTAGTGGCATGAGGTCTGTT+TGG + chr7_2:77020194-77020213 Msa1078130:CDS 50.0%
AGTGGCATGAGGTCTGTTTG+GGG + chr7_2:77020196-77020215 Msa1078130:CDS 50.0%
AGAACTTGTGGAGGATGCAG+TGG + chr7_2:77020351-77020370 Msa1078130:CDS 50.0%
!! CAGTGGTTGATTTGACAGGC+AGG + chr7_2:77020368-77020387 Msa1078130:CDS 50.0%
TTTGACAGGCAGGGTCTGAA+TGG + chr7_2:77020378-77020397 Msa1078130:exon 50.0%
AGTTAGGTGTTTGCGTCGCG+TGG - chr7_2:77015300-77015319 None:intergenic 55.0%
GAGAGCGGAGTGGTTAGGTT+GGG - chr7_2:77015335-77015354 None:intergenic 55.0%
AGAGAGCGGAGTGGTTAGGT+TGG - chr7_2:77015336-77015355 None:intergenic 55.0%
AGAGAGAGAGCGGAGTGGTT+AGG - chr7_2:77015340-77015359 None:intergenic 55.0%
GAGAGAGAGAGAGCGAACCT+GGG - chr7_2:77015409-77015428 None:intergenic 55.0%
AGAGAGAGAGAGAGCGAACC+TGG - chr7_2:77015410-77015429 None:intergenic 55.0%
GAAAGGGGAATGTCGGTGGA+GGG - chr7_2:77015467-77015486 None:intergenic 55.0%
GAAGGAAAGGGGAATGTCGG+TGG - chr7_2:77015471-77015490 None:intergenic 55.0%
AAACCGCACCGCGATCATCA+TGG + chr7_2:77016004-77016023 Msa1078130:CDS 55.0%
TGACCATGATGATCGCGGTG+CGG - chr7_2:77016010-77016029 None:intergenic 55.0%
TTAGCTGTGGAGAGAAGCCC+TGG + chr7_2:77016953-77016972 Msa1078130:CDS 55.0%
GAGACAAGACACCGGAGAGA+CGG + chr7_2:77017152-77017171 Msa1078130:CDS 55.0%
TCAACCCACTTCCGTCTCTC+CGG - chr7_2:77017166-77017185 None:intergenic 55.0%
TCATGCGCCCTCACAGAACT+TGG - chr7_2:77017586-77017605 None:intergenic 55.0%
GTCATCGCCAATATAGCCCG+TGG - chr7_2:77017794-77017813 None:intergenic 55.0%
! AGAACAGGAAGCGCGACTGA+AGG - chr7_2:77017944-77017963 None:intergenic 55.0%
GGGTAAAGCACACGACTCCA+AGG + chr7_2:77018302-77018321 Msa1078130:CDS 55.0%
AGCTTCAACGGTGGCTTCTC+TGG + chr7_2:77018519-77018538 Msa1078130:CDS 55.0%
TATCGCAGGGGAAGAGAGGA+GGG - chr7_2:77018742-77018761 None:intergenic 55.0%
TCCTCTCTTCCCCTGCGATA+GGG + chr7_2:77018742-77018761 Msa1078130:intron 55.0%
TTCCCCTGCGATAGGGCAAA+AGG + chr7_2:77018749-77018768 Msa1078130:intron 55.0%
TCCCCTGCGATAGGGCAAAA+GGG + chr7_2:77018750-77018769 Msa1078130:intron 55.0%
! TCCCTTTTGCCCTATCGCAG+GGG - chr7_2:77018754-77018773 None:intergenic 55.0%
CTGGAAATCCATGGCACCCT+GGG - chr7_2:77019426-77019445 None:intergenic 55.0%
ACTGGAAATCCATGGCACCC+TGG - chr7_2:77019427-77019446 None:intergenic 55.0%
!! CGGCTGATCCTGGTTTTCAC+TGG - chr7_2:77019445-77019464 None:intergenic 55.0%
AGATTGGACTCGGCTGATCC+TGG - chr7_2:77019455-77019474 None:intergenic 55.0%
AATGGGCAGGTTGTGGAGTG+GGG + chr7_2:77020090-77020109 Msa1078130:CDS 55.0%
CTGATCCTTGGAGCCTTCTG+TGG - chr7_2:77020117-77020136 None:intergenic 55.0%
CAGAAGGCTCCAAGGATCAG+AGG + chr7_2:77020117-77020136 Msa1078130:CDS 55.0%
AAGGTGCACCCTCTGATCCT+TGG - chr7_2:77020129-77020148 None:intergenic 55.0%
! AGAGGGTGCACCTTCCCTAT+TGG + chr7_2:77020135-77020154 Msa1078130:CDS 55.0%
GTGGCATGAGGTCTGTTTGG+GGG + chr7_2:77020197-77020216 Msa1078130:CDS 55.0%
TGGCATGAGGTCTGTTTGGG+GGG + chr7_2:77020198-77020217 Msa1078130:CDS 55.0%
AGGTCTGTTTGGGGGGATTG+TGG + chr7_2:77020205-77020224 Msa1078130:CDS 55.0%
GGTCTGTTTGGGGGGATTGT+GGG + chr7_2:77020206-77020225 Msa1078130:CDS 55.0%
GTCTGTTTGGGGGGATTGTG+GGG + chr7_2:77020207-77020226 Msa1078130:CDS 55.0%
TGACAACAGTCTCCACCACC+AGG - chr7_2:77020243-77020262 None:intergenic 55.0%
AAGAGGTCGTGGGTAAAGGG+TGG + chr7_2:77020266-77020285 Msa1078130:CDS 55.0%
AGAGGTCGTGGGTAAAGGGT+GGG + chr7_2:77020267-77020286 Msa1078130:CDS 55.0%
TTTGCGTCGCGTGGTCAGGT+CGG - chr7_2:77015291-77015310 None:intergenic 60.0%
GAGAGAGAGAGAGAGCGGAG+TGG - chr7_2:77015345-77015364 None:intergenic 60.0%
AATCACCGTCTCCTCCTCCC+AGG + chr7_2:77015389-77015408 Msa1078130:five_prime_UTR 60.0%
AGAGAGAGAGCGAACCTGGG+AGG - chr7_2:77015406-77015425 None:intergenic 60.0%
GGAAAGGGGAATGTCGGTGG+AGG - chr7_2:77015468-77015487 None:intergenic 60.0%
TGGGCCTTGAAGCCCTTCCA+CGG + chr7_2:77016918-77016937 Msa1078130:CDS 60.0%
AGACACCGGAGAGACGGAAG+TGG + chr7_2:77017158-77017177 Msa1078130:CDS 60.0%
GACACCGGAGAGACGGAAGT+GGG + chr7_2:77017159-77017178 Msa1078130:CDS 60.0%
!! TGGCTGGCTGGAGAGTATCC+AGG - chr7_2:77017514-77017533 None:intergenic 60.0%
ATCGCAGGGGAAGAGAGGAG+GGG - chr7_2:77018741-77018760 None:intergenic 60.0%
CTATCGCAGGGGAAGAGAGG+AGG - chr7_2:77018743-77018762 None:intergenic 60.0%
CTCCTCTCTTCCCCTGCGAT+AGG + chr7_2:77018741-77018760 Msa1078130:intron 60.0%
! TGGCACCCTGGGCTTTGACA+TGG - chr7_2:77019415-77019434 None:intergenic 60.0%
! TGTCAAAGCCCAGGGTGCCA+TGG + chr7_2:77019415-77019434 Msa1078130:CDS 60.0%
ATGGGCAGGTTGTGGAGTGG+GGG + chr7_2:77020091-77020110 Msa1078130:CDS 60.0%
GGGTGCACCTTCCCTATTGG+TGG + chr7_2:77020138-77020157 Msa1078130:CDS 60.0%
TTGTGGGGACAGCAACAGCC+TGG + chr7_2:77020222-77020241 Msa1078130:CDS 60.0%
GGTGTTTGCGTCGCGTGGTC+AGG - chr7_2:77015295-77015314 None:intergenic 65.0%
GCGAACCTGGGAGGAGGAGA+CGG - chr7_2:77015397-77015416 None:intergenic 65.0%
GAGAGAGCGAACCTGGGAGG+AGG - chr7_2:77015403-77015422 None:intergenic 65.0%
GGGCCTTGAAGCCCTTCCAC+GGG + chr7_2:77016919-77016938 Msa1078130:CDS 65.0%
GGCCTTGAAGCCCTTCCACG+GGG + chr7_2:77016920-77016939 Msa1078130:CDS 65.0%
CTCCCCGTGGAAGGGCTTCA+AGG - chr7_2:77016925-77016944 None:intergenic 65.0%
GCTGTGGAGAGAAGCCCTGG+AGG + chr7_2:77016956-77016975 Msa1078130:CDS 65.0%
TCGCAGGGGAAGAGAGGAGG+GGG - chr7_2:77018740-77018759 None:intergenic 65.0%
GCCCTATCGCAGGGGAAGAG+AGG - chr7_2:77018746-77018765 None:intergenic 65.0%
TGTGGAGTGGGGGCCACAGA+AGG + chr7_2:77020101-77020120 Msa1078130:CDS 65.0%
TGGGGACAGCAACAGCCTGG+TGG + chr7_2:77020225-77020244 Msa1078130:CDS 65.0%
GGACAGCAACAGCCTGGTGG+TGG + chr7_2:77020228-77020247 Msa1078130:CDS 65.0%
GGGGGCCACAGAAGGCTCCA+AGG + chr7_2:77020109-77020128 Msa1078130:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 77015238 77020615 77015238 ID=Msa1078130;Name=Msa1078130
chr7_2 mRNA 77015238 77020615 77015238 ID=Msa1078130-mRNA-1;Parent=Msa1078130;Name=Msa1078130-mRNA-1;_AED=0.04;_eAED=0.04;_QI=189|1|1|1|0.8|0.66|6|219|985
chr7_2 exon 77015238 77015410 77015238 ID=Msa1078130-mRNA-1:exon:18809;Parent=Msa1078130-mRNA-1
chr7_2 exon 77015856 77016025 77015856 ID=Msa1078130-mRNA-1:exon:18810;Parent=Msa1078130-mRNA-1
chr7_2 exon 77016527 77016606 77016527 ID=Msa1078130-mRNA-1:exon:18811;Parent=Msa1078130-mRNA-1
chr7_2 exon 77016785 77018629 77016785 ID=Msa1078130-mRNA-1:exon:18812;Parent=Msa1078130-mRNA-1
chr7_2 exon 77019402 77019549 77019402 ID=Msa1078130-mRNA-1:exon:18813;Parent=Msa1078130-mRNA-1
chr7_2 exon 77019666 77020615 77019666 ID=Msa1078130-mRNA-1:exon:18814;Parent=Msa1078130-mRNA-1
chr7_2 five_prime_UTR 77015238 77015410 77015238 ID=Msa1078130-mRNA-1:five_prime_utr;Parent=Msa1078130-mRNA-1
chr7_2 five_prime_UTR 77015856 77015871 77015856 ID=Msa1078130-mRNA-1:five_prime_utr;Parent=Msa1078130-mRNA-1
chr7_2 CDS 77015872 77016025 77015872 ID=Msa1078130-mRNA-1:cds;Parent=Msa1078130-mRNA-1
chr7_2 CDS 77016527 77016606 77016527 ID=Msa1078130-mRNA-1:cds;Parent=Msa1078130-mRNA-1
chr7_2 CDS 77016785 77018629 77016785 ID=Msa1078130-mRNA-1:cds;Parent=Msa1078130-mRNA-1
chr7_2 CDS 77019402 77019549 77019402 ID=Msa1078130-mRNA-1:cds;Parent=Msa1078130-mRNA-1
chr7_2 CDS 77019666 77020396 77019666 ID=Msa1078130-mRNA-1:cds;Parent=Msa1078130-mRNA-1
chr7_2 three_prime_UTR 77020397 77020615 77020397 ID=Msa1078130-mRNA-1:three_prime_utr;Parent=Msa1078130-mRNA-1
Gene Sequence

>Msa1078130

ATGAGCGGTGTCAAGAATAATACAAGGGTTCACGCTGATGACAAACCTTTTCCTGGATGTCTGGGAAGAATGGTTAATCTCTTTGATTTGACTCCTTCTACTGTTGTAAATGCAAACAAGCTTCTCACCGATAAACCGCACCGCGATCATCATGCAGCATCACTTTCAAGAAGTCAATCAGATGTTTCGAGGACTGCAAGTCCTTCATTTGGTGATCGGATAGAAGATAAGCCGATTGTTTCTGACTTAATGAGAGCATCTTCAAATAAGAAAGTAAACGGAACACCCATCAAGATGCTTATGGACCAAGAAATGTCCAAAGAAATTGTTTCCAAGCATAGTCCACCAAATGTGGTTGCAAAATTAATGGGCCTTGAAGCCCTTCCACGGGGAGAACATAGTTTAGCTGTGGAGAGAAGCCCTGGAGGAGATTGTTCTCAGCATATGTGTAGTCATTCTGCGACATCATTCAATCATTGGCAGCTGGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCCGAGCAGAGAACAGGTTGCTTACAAAGATATTTATGAATTATGGCTGCAATCACAAAGAACAAGCAATGTAAGAGACAAGACACCGGAGAGACGGAAGTGGGTTGAAGATGTTAATGAGAAGAAGATGGCTCTTATACGCCAAAAATTCATGGAAGCAAAGCGTCTGTCTACAGATGAGAGGTTACGTCAATCAAAGGAGTTTGATGAAACCTTAGAAGTTTTAAGCTCCAACAACGATCTGTTAATAAAGTTACTGGATTCTCAAAATCTATATGAACGACAGTCTACTCCACTGGCTGAGACAAAGCGTATTACCGTTCTTAAACCTTCAAAGATGGTTGACAATGAAAAATTCTGTAGAAAGGGAAACAATAATGACAAGCATTTTAAGAAACCATTAAATAATGATGTTGCGTGGGAGAAAAATAGTCCTGGATACTCTCCAGCCAGCCAGAAAGTTGATGAGTTTGCTGTTCAACCTACTCGAATAGTGGTATTGAAGCCAAGTTCTGTGAGGGCGCATGATATTAAGGACGTGGTTTCTCCAACAGTATCATCACCTCAAAATCTGCAAAGTGGAAACTTCTATCATGACCCTGAGGATGATGATCTACTGGAATCGAGAAAAGTGGCAGAAGAAATTACACAGCAGATGCATGAAGAAGCGAGGAGCTACCAAAGAGATGAAACCGTGTATTCTTCAGTATTTTCCACGGGCTATATTGGCGATGACAGTTCATTCTACAAATCAGATCATGAGTGTACTGCTGGGAATTTTAGTGATTTGGAAGTTATGTCACCATCTCCAAGACATTCTTGGGATTTCGTCAATCGCTGTGGAAGTCCTTATTCGTCTTCATCCTTCAGTCGCGCTTCCTGTTCTCCTGAGTCGTCAGTATGCAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCTAAGAAGGGTTTTCAAGAACAAAGACATATGCGGAGAAGCTCTACCTTGGGCGAAATGCTTGCTCTTTCCGATGTGAAGAAATCTCTAATATCTGAGTTTGAAGGTATTAATAAAGAACAAGAACCGAATGAATCTGTTTCTTGCAGTAAAAATTTCAATGAAGAAATACGCGCAGATGGTTCTCCTAAAAACCTTCCCAGGTCAAAATCTGTCCCTCTTTCTTCCACTGTCTATGAACATGGGCTCTACGTTGAAGCTTGTAATAATGATGCGGGTAAAGCACACGACTCCAAGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTGCAAGTTTCTTATTCTCAAGGAATAAGAAATCAATCAGGGAAAAATCTTGTCTATCTATTTCTACAGACGAGTCCCAATCAACTGTTGCAGAAACATCAGTATCTCCAATAAACTCACCTGAAGTCCTTAGGAATGACATGTCTCAAAGCTTCAACGGTGGCTTCTCTGGAGAGTGTTCTCTTCCAACTCTTTGTGAATCATCGGGCAAAACTTTATCCAGTTCTGTCTTGAACAAACAAGGCGTAATATCTCTGGAGCCTGAATTGACCATGTCAAAGCCCAGGGTGCCATGGATTTCCAGTGAAAACCAGGATCAGCCGAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGAAAATGCAGCTCATGAGTCCTTGGACTGTATGAAGAGTGGTCAGCTTGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGGATCAATAGCTCGAACCCTCTCATGGGATGATTCTTGTGCAGAGGTGGCAAGTCCGTACCAATTAAAGCCTTCATTGGTTTCCTTGGACACGAAGGTAGAGGATCAAGACTTGCTTGTCTTCGTTCAGAAATTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGCCTGACTCGTTTTATTCTAGATGGCATTCTCTTGAAAGTCCATTGGATCCAACATTGAGGGACAAATACGCCAATCTCAATGACAATGAACCTCAACCTGTACACGAAGCAAAGCGAAGACAGAGGAGGTCTAATCAGAAGCTTATATTTGATTGTGTCAATGTTGCACTAATGGAAATTACTGGTTACGGATTAGAAAGTTCCTTAATGGGCAGGTTGTGGAGTGGGGGCCACAGAAGGCTCCAAGGATCAGAGGGTGCACCTTCCCTATTGGTGGATTTGATTGTATCCCATATGAAGGAGTTGACATCTAGTGGCATGAGGTCTGTTTGGGGGGATTGTGGGGACAGCAACAGCCTGGTGGTGGAGACTGTTGTCAGAAAAGAGGTCGTGGGTAAAGGGTGGGTTGAGCTTATGGGATTTGAAATGGATATTTGGGTGAAGGAAGTAGAGGGGAAATTGCTAGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGGCAGGGTCTGA
Protein sequence

>Msa1078130

MSGVKNNTRVHADDKPFPGCLGRMVNLFDLTPSTVVNANKLLTDKPHRDHHAASLSRSQSDVSRTASPSFGDRIEDKPIVSDLMRASSNKKVNGTPIKMLMDQEMSKEIVSKHSPPNVVAKLMGLEALPRGEHSLAVERSPGGDCSQHMCSHSATSFNHWQLEDRFMDKEMLHEVHPSREQVAYKDIYELWLQSQRTSNVRDKTPERRKWVEDVNEKKMALIRQKFMEAKRLSTDERLRQSKEFDETLEVLSSNNDLLIKLLDSQNLYERQSTPLAETKRITVLKPSKMVDNEKFCRKGNNNDKHFKKPLNNDVAWEKNSPGYSPASQKVDEFAVQPTRIVVLKPSSVRAHDIKDVVSPTVSSPQNLQSGNFYHDPEDDDLLESRKVAEEITQQMHEEARSYQRDETVYSSVFSTGYIGDDSSFYKSDHECTAGNFSDLEVMSPSPRHSWDFVNRCGSPYSSSSFSRASCSPESSVCREAKKRLSERWAMMASKKGFQEQRHMRRSSTLGEMLALSDVKKSLISEFEGINKEQEPNESVSCSKNFNEEIRADGSPKNLPRSKSVPLSSTVYEHGLYVEACNNDAGKAHDSKELTKSKSMKSSFKGKVASFLFSRNKKSIREKSCLSISTDESQSTVAETSVSPINSPEVLRNDMSQSFNGGFSGECSLPTLCESSGKTLSSSVLNKQGVISLEPELTMSKPRVPWISSENQDQPSPISVLEPPFEDENAAHESLDCMKSGQLGSRVSLKSNLIDKSPPIGSIARTLSWDDSCAEVASPYQLKPSLVSLDTKVEDQDLLVFVQKLLSAAGLDDQVQPDSFYSRWHSLESPLDPTLRDKYANLNDNEPQPVHEAKRRQRRSNQKLIFDCVNVALMEITGYGLESSLMGRLWSGGHRRLQGSEGAPSLLVDLIVSHMKELTSSGMRSVWGDCGDSNSLVVETVVRKEVVGKGWVELMGFEMDIWVKEVEGKLLEELVEDAVVDLTGRV*