Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078370 | XP_003625544.2 | 78.947 | 285 | 11 | 1 | 1 | 285 | 1 | 236 | 4.55e-155 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078370 | sp|Q9LZ06|GSTL3_ARATH | 55.351 | 271 | 72 | 1 | 12 | 282 | 14 | 235 | 1.21e-103 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078370 | G7L0P7 | 78.947 | 285 | 11 | 1 | 1 | 285 | 1 | 236 | 2.17e-155 | 442 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0437110 | Msa1078370 | 0.802700 | 4.954744e-49 | -8.615850e-47 |
| Msa1078370 | Msa1169820 | 0.803949 | 2.730208e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078370 | MtrunA17_Chr7g0263221 | 78.947 | 285 | 11 | 1 | 1 | 285 | 1 | 236 | 4.18e-159 | 442 |
| Msa1078370 | MtrunA17_Chr1g0181861 | 62.633 | 281 | 56 | 1 | 5 | 285 | 6 | 237 | 2.52e-124 | 354 |
| Msa1078370 | MtrunA17_Chr1g0181851 | 53.309 | 272 | 45 | 2 | 11 | 282 | 8 | 197 | 5.24e-90 | 267 |
| Msa1078370 | MtrunA17_Chr1g0213361 | 51.724 | 261 | 76 | 2 | 23 | 283 | 105 | 315 | 8.36e-85 | 256 |
| Msa1078370 | MtrunA17_Chr1g0181841 | 56.738 | 141 | 35 | 1 | 5 | 119 | 1 | 141 | 1.91e-50 | 163 |
| Msa1078370 | MtrunA17_Chr3g0107741 | 30.994 | 171 | 103 | 7 | 78 | 238 | 59 | 224 | 1.76e-12 | 65.5 |
| Msa1078370 | MtrunA17_Chr2g0312791 | 32.243 | 214 | 118 | 10 | 33 | 230 | 11 | 213 | 4.31e-11 | 61.6 |
| Msa1078370 | MtrunA17_Chr2g0312811 | 29.907 | 214 | 117 | 10 | 36 | 230 | 14 | 213 | 5.93e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078370 | AT5G02790.1 | 55.351 | 271 | 72 | 1 | 12 | 282 | 14 | 235 | 1.23e-104 | 304 |
| Msa1078370 | AT5G02780.1 | 52.206 | 272 | 79 | 3 | 12 | 282 | 16 | 237 | 7.23e-95 | 280 |
| Msa1078370 | AT5G02780.3 | 52.206 | 272 | 79 | 3 | 12 | 282 | 16 | 237 | 7.23e-95 | 280 |
| Msa1078370 | AT5G02780.2 | 52.045 | 269 | 77 | 3 | 12 | 279 | 16 | 233 | 7.97e-93 | 275 |
| Msa1078370 | AT3G55040.1 | 48.936 | 282 | 95 | 1 | 3 | 284 | 57 | 289 | 8.25e-93 | 276 |
Find 72 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACACTAATGATACTTTAT+TGG | 0.193930 | 7_2:+77334031 | None:intergenic |
| GCAGGCTCAACAGTGAAAAT+TGG | 0.195050 | 7_2:-77334088 | Msa1078370:intron |
| GGTGAAATATCTATAATAAT+TGG | 0.205562 | 7_2:-77333812 | None:intergenic |
| TCCGCAAATGGAAACGAAAA+TGG | 0.257903 | 7_2:-77334398 | Msa1078370:CDS |
| AGACATGCCTGTTTGGTATA+AGG | 0.278756 | 7_2:-77335428 | Msa1078370:CDS |
| AGCTTACTGTGGCTTGGTTT+GGG | 0.288495 | 7_2:+77336146 | None:intergenic |
| TCACCAAACTCTTTCTTTGC+AGG | 0.295908 | 7_2:+77335124 | None:intergenic |
| GAGCTTACTGTGGCTTGGTT+TGG | 0.298262 | 7_2:+77336145 | None:intergenic |
| TTCGTTTCCATTTGCGGAAC+AGG | 0.303576 | 7_2:+77334403 | None:intergenic |
| CAATGAAGAGTACAGATCTT+TGG | 0.308227 | 7_2:+77335072 | None:intergenic |
| CGAAAATGGGCCACAGAAAA+TGG | 0.310220 | 7_2:-77334384 | Msa1078370:intron |
| AAAATATCAACAATTTCATT+TGG | 0.321951 | 7_2:+77334233 | None:intergenic |
| TTCAGGAGCTTACTGTGGCT+TGG | 0.362186 | 7_2:+77336140 | None:intergenic |
| AGGTCCTGCCTTTGATTACT+TGG | 0.363544 | 7_2:-77334939 | Msa1078370:CDS |
| ACTACAAGACAAAATCAAAT+TGG | 0.371760 | 7_2:-77335467 | Msa1078370:CDS |
| ACACCTCAGAAAAGACTATA+TGG | 0.374447 | 7_2:+77334582 | None:intergenic |
| TCTTTCAACAAATGGAATAT+AGG | 0.379083 | 7_2:+77334607 | None:intergenic |
| TCAATCCATGCTGCGAGTTT+CGG | 0.383650 | 7_2:+77334533 | None:intergenic |
| ACCTTCAAGACATGCCTGTT+TGG | 0.391143 | 7_2:-77335435 | Msa1078370:CDS |
| GGCATGTCTTGAAGGTTAAT+AGG | 0.393880 | 7_2:+77335442 | None:intergenic |
| CTCAATTCTGTACAACGTTA+AGG | 0.408171 | 7_2:-77336180 | Msa1078370:five_prime_UTR |
| ATATGGAATCTTTCAACAAA+TGG | 0.410892 | 7_2:+77334599 | None:intergenic |
| GTGAAATATCTATAATAATT+GGG | 0.411290 | 7_2:-77333811 | None:intergenic |
| AACTTAACCTGTTCCGCAAA+TGG | 0.414010 | 7_2:-77334410 | Msa1078370:CDS |
| TATGAATTGATTACAAATCA+AGG | 0.418475 | 7_2:-77334455 | Msa1078370:CDS |
| CAGGCTCAACAGTGAAAATT+GGG | 0.419928 | 7_2:-77334087 | Msa1078370:exon |
| TTCAAGCATGATATAATAGA+AGG | 0.420899 | 7_2:-77334560 | Msa1078370:CDS |
| GATCCTGCAAAGAAAGAGTT+TGG | 0.421571 | 7_2:-77335127 | Msa1078370:CDS |
| GATGATGGACAATTCTTCCT+AGG | 0.422545 | 7_2:-77334896 | Msa1078370:CDS |
| GGAGCACAATGGGAAGGTCT+TGG | 0.435080 | 7_2:-77335292 | Msa1078370:CDS |
| ACTTTCTCCTTATACCAAAC+AGG | 0.438140 | 7_2:+77335421 | None:intergenic |
| ATGGATCGCTAGAAACTATA+AGG | 0.444720 | 7_2:-77335888 | Msa1078370:intron |
| ATCAACAATTTCATTTGGAT+CGG | 0.455372 | 7_2:+77334238 | None:intergenic |
| TTCATAAACGAATGCAATTG+TGG | 0.455775 | 7_2:+77334472 | None:intergenic |
| ACCAAACAGGCATGTCTTGA+AGG | 0.460135 | 7_2:+77335434 | None:intergenic |
| GATTACTTGGAGAATGCTCT+TGG | 0.461042 | 7_2:-77334926 | Msa1078370:CDS |
| GAGCACAATGGGAAGGTCTT+GGG | 0.461051 | 7_2:-77335291 | Msa1078370:CDS |
| TGCCATCGTTGGAGCACAAT+GGG | 0.465276 | 7_2:-77335302 | Msa1078370:CDS |
| AATAGGAGGTGGATCGGAGT+TGG | 0.478355 | 7_2:+77336059 | None:intergenic |
| GGATCGGAGTTGGAAGTTAA+CGG | 0.487819 | 7_2:+77336069 | None:intergenic |
| TCTTCCTAGGACAATTCAGT+TGG | 0.490626 | 7_2:-77334883 | Msa1078370:CDS |
| GCTCTTGGTAAATTTGATGA+TGG | 0.492656 | 7_2:-77334911 | Msa1078370:CDS |
| CCGCAAATGGAAACGAAAAT+GGG | 0.499547 | 7_2:-77334397 | Msa1078370:CDS |
| ATCCATGCACGTTGTGCGTA+GGG | 0.502600 | 7_2:+77335905 | None:intergenic |
| GTCCCTACGCACAACGTGCA+TGG | 0.512079 | 7_2:-77335907 | Msa1078370:CDS |
| TTACCCAACTGAATTGTCCT+AGG | 0.515015 | 7_2:+77334879 | None:intergenic |
| TCATAAACGAATGCAATTGT+GGG | 0.515423 | 7_2:+77334473 | None:intergenic |
| CTTCCTAGGACAATTCAGTT+GGG | 0.517591 | 7_2:-77334882 | Msa1078370:intron |
| GATCTGTACTCTTCATTGAA+AGG | 0.526123 | 7_2:-77335067 | Msa1078370:CDS |
| CAGTGAAAATTGGGTTGCAA+TGG | 0.530254 | 7_2:-77334078 | Msa1078370:exon |
| TTCTCCAAGTAATCAAAGGC+AGG | 0.548201 | 7_2:+77334935 | None:intergenic |
| GGCAGCAGTCTACCTCTCAA+AGG | 0.554898 | 7_2:+77334052 | None:intergenic |
| GCAGCAGTCTACCTCTCAAA+GGG | 0.555531 | 7_2:+77334053 | None:intergenic |
| TTCCCATTGTGCTCCAACGA+TGG | 0.562767 | 7_2:+77335300 | None:intergenic |
| GGAGATCCTATAAAACAAGC+TGG | 0.576421 | 7_2:-77335046 | Msa1078370:intron |
| CTCACACTGGGAACTAGAGA+TGG | 0.581337 | 7_2:+77335222 | None:intergenic |
| AGCATTCTCCAAGTAATCAA+AGG | 0.590018 | 7_2:+77334931 | None:intergenic |
| AGGTCATCAATCCGAACTTG+AGG | 0.592258 | 7_2:-77334435 | Msa1078370:CDS |
| TTGCAATGGCACCCTTTGAG+AGG | 0.592579 | 7_2:-77334064 | Msa1078370:three_prime_UTR |
| GAAAGTCTACCCAGAAAACA+AGG | 0.594976 | 7_2:-77335404 | Msa1078370:intron |
| GTATGTATAGGTGCCATCGT+TGG | 0.598903 | 7_2:-77335313 | Msa1078370:intron |
| GTGCCATCGTTGGAGCACAA+TGG | 0.601381 | 7_2:-77335303 | Msa1078370:CDS |
| AGCATGATATAATAGAAGGA+AGG | 0.603963 | 7_2:-77334556 | Msa1078370:CDS |
| GAAACTCGCAGCATGGATTG+AGG | 0.611681 | 7_2:-77334531 | Msa1078370:CDS |
| GATCCATGCACGTTGTGCGT+AGG | 0.612260 | 7_2:+77335904 | None:intergenic |
| GAAGGCCGAAACTCGCAGCA+TGG | 0.614570 | 7_2:-77334538 | Msa1078370:CDS |
| ATCGTTGGAGCACAATGGGA+AGG | 0.614660 | 7_2:-77335298 | Msa1078370:CDS |
| TATTTCACCATCCATCAACA+TGG | 0.644962 | 7_2:+77333826 | None:intergenic |
| ACATTATTTATACAATACAG+TGG | 0.670741 | 7_2:+77333872 | None:intergenic |
| TTGATGCTTATACACAGACA+AGG | 0.678414 | 7_2:-77334262 | Msa1078370:CDS |
| TGATGCTTATACACAGACAA+GGG | 0.702603 | 7_2:-77334261 | Msa1078370:CDS |
| TCGGAGTTGGAAGTTAACGG+AGG | 0.743580 | 7_2:+77336072 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATGTTTTACTATTTATA+AGG | + | chr7_2:77333821-77333840 | None:intergenic | 10.0% |
| !! | AATTGTAAAGAAAAAAATAA+CGG | + | chr7_2:77334037-77334056 | None:intergenic | 10.0% |
| !!! | TAATATAATCGATTTTTTTT+GGG | + | chr7_2:77334863-77334882 | None:intergenic | 10.0% |
| !!! | TTTATGTTTTACTATTTATA+AGG | + | chr7_2:77333821-77333840 | None:intergenic | 10.0% |
| !! | AATTGTAAAGAAAAAAATAA+CGG | + | chr7_2:77334037-77334056 | None:intergenic | 10.0% |
| !!! | TAATATAATCGATTTTTTTT+GGG | + | chr7_2:77334863-77334882 | None:intergenic | 10.0% |
| !! | ATATAAAACAATAAACAAAG+AGG | + | chr7_2:77334200-77334219 | None:intergenic | 15.0% |
| !!! | GTAATTTAAAATATGATTCA+AGG | + | chr7_2:77334313-77334332 | None:intergenic | 15.0% |
| !! | TAAATTAATTTCAGTTGATT+TGG | - | chr7_2:77334391-77334410 | Msa1078370:CDS | 15.0% |
| !!! | TGTTTTATTCTATGATTAAT+AGG | - | chr7_2:77334517-77334536 | Msa1078370:CDS | 15.0% |
| !!! | ATTATTTTTTTCGTATGTAT+AGG | - | chr7_2:77334716-77334735 | Msa1078370:intron | 15.0% |
| !!! | AATATAATCGATTTTTTTTG+GGG | + | chr7_2:77334862-77334881 | None:intergenic | 15.0% |
| !!! | CTAATATAATCGATTTTTTT+TGG | + | chr7_2:77334864-77334883 | None:intergenic | 15.0% |
| !! | AAAAAAATCGATTATATTAG+TGG | - | chr7_2:77334864-77334883 | Msa1078370:intron | 15.0% |
| !!! | TTTTTATGATTTTGTTTTTC+AGG | - | chr7_2:77334892-77334911 | Msa1078370:CDS | 15.0% |
| !! | TCTTATATATAAGTTGTTAT+TGG | - | chr7_2:77335388-77335407 | Msa1078370:intron | 15.0% |
| !! | AAAATATCAACAATTTCATT+TGG | + | chr7_2:77335811-77335830 | None:intergenic | 15.0% |
| !! | GTGAAATATCTATAATAATT+GGG | - | chr7_2:77336230-77336249 | Msa1078370:five_prime_UTR | 15.0% |
| !! | ATATAAAACAATAAACAAAG+AGG | + | chr7_2:77334200-77334219 | None:intergenic | 15.0% |
| !!! | GTAATTTAAAATATGATTCA+AGG | + | chr7_2:77334313-77334332 | None:intergenic | 15.0% |
| !! | TAAATTAATTTCAGTTGATT+TGG | - | chr7_2:77334391-77334410 | Msa1078370:CDS | 15.0% |
| !!! | TGTTTTATTCTATGATTAAT+AGG | - | chr7_2:77334517-77334536 | Msa1078370:CDS | 15.0% |
| !!! | ATTATTTTTTTCGTATGTAT+AGG | - | chr7_2:77334716-77334735 | Msa1078370:intron | 15.0% |
| !!! | AATATAATCGATTTTTTTTG+GGG | + | chr7_2:77334862-77334881 | None:intergenic | 15.0% |
| !!! | CTAATATAATCGATTTTTTT+TGG | + | chr7_2:77334864-77334883 | None:intergenic | 15.0% |
| !! | AAAAAAATCGATTATATTAG+TGG | - | chr7_2:77334864-77334883 | Msa1078370:intron | 15.0% |
| !!! | TTTTTATGATTTTGTTTTTC+AGG | - | chr7_2:77334892-77334911 | Msa1078370:CDS | 15.0% |
| !! | TCTTATATATAAGTTGTTAT+TGG | - | chr7_2:77335388-77335407 | Msa1078370:intron | 15.0% |
| !! | AAAATATCAACAATTTCATT+TGG | + | chr7_2:77335811-77335830 | None:intergenic | 15.0% |
| !!! | ATTGTTAGATTTGTTTTTTC+AGG | + | chr7_2:77333921-77333940 | None:intergenic | 20.0% |
| !! | TGAAAAAACAAATCTAACAA+TGG | - | chr7_2:77333920-77333939 | Msa1078370:three_prime_UTR | 20.0% |
| !!! | CATTACTAACTTAATTGTTT+TGG | - | chr7_2:77334429-77334448 | Msa1078370:CDS | 20.0% |
| !! | GAAAAAAATAATGATCAACT+AGG | + | chr7_2:77334708-77334727 | None:intergenic | 20.0% |
| !!! | ATATAATCGATTTTTTTTGG+GGG | + | chr7_2:77334861-77334880 | None:intergenic | 20.0% |
| !!! | TGAAATTGGTAATTTGAATA+AGG | - | chr7_2:77335082-77335101 | Msa1078370:CDS | 20.0% |
| !!! | ATTTTAAGCATATTACTTGT+CGG | - | chr7_2:77335228-77335247 | Msa1078370:CDS | 20.0% |
| !!! | ATTTTTAATAAAGCATGTGA+TGG | - | chr7_2:77335271-77335290 | Msa1078370:CDS | 20.0% |
| !! | TATGAATTGATTACAAATCA+AGG | - | chr7_2:77335586-77335605 | Msa1078370:intron | 20.0% |
| !! | AAACACTAATGATACTTTAT+TGG | + | chr7_2:77336013-77336032 | None:intergenic | 20.0% |
| !! | ACATTATTTATACAATACAG+TGG | + | chr7_2:77336172-77336191 | None:intergenic | 20.0% |
| !! | GGTGAAATATCTATAATAAT+TGG | - | chr7_2:77336229-77336248 | Msa1078370:five_prime_UTR | 20.0% |
| !!! | ATTGTTAGATTTGTTTTTTC+AGG | + | chr7_2:77333921-77333940 | None:intergenic | 20.0% |
| !! | TGAAAAAACAAATCTAACAA+TGG | - | chr7_2:77333920-77333939 | Msa1078370:three_prime_UTR | 20.0% |
| !!! | CATTACTAACTTAATTGTTT+TGG | - | chr7_2:77334429-77334448 | Msa1078370:CDS | 20.0% |
| !! | GAAAAAAATAATGATCAACT+AGG | + | chr7_2:77334708-77334727 | None:intergenic | 20.0% |
| !!! | ATATAATCGATTTTTTTTGG+GGG | + | chr7_2:77334861-77334880 | None:intergenic | 20.0% |
| !!! | TGAAATTGGTAATTTGAATA+AGG | - | chr7_2:77335082-77335101 | Msa1078370:CDS | 20.0% |
| !!! | ATTTTAAGCATATTACTTGT+CGG | - | chr7_2:77335228-77335247 | Msa1078370:CDS | 20.0% |
| !!! | ATTTTTAATAAAGCATGTGA+TGG | - | chr7_2:77335271-77335290 | Msa1078370:CDS | 20.0% |
| !! | TATGAATTGATTACAAATCA+AGG | - | chr7_2:77335586-77335605 | Msa1078370:intron | 20.0% |
| !! | AAACACTAATGATACTTTAT+TGG | + | chr7_2:77336013-77336032 | None:intergenic | 20.0% |
| !! | ACATTATTTATACAATACAG+TGG | + | chr7_2:77336172-77336191 | None:intergenic | 20.0% |
| ! | TGTAAAGAAAAAAATAACGG+AGG | + | chr7_2:77334034-77334053 | None:intergenic | 25.0% |
| ! | AGTTGATTAAAACAAGACTA+AGG | + | chr7_2:77334367-77334386 | None:intergenic | 25.0% |
| !!! | TAATTTCAGTTGATTTGGTT+AGG | - | chr7_2:77334396-77334415 | Msa1078370:CDS | 25.0% |
| !!! | TAATTGTTTTGGTTTTCTCA+AGG | - | chr7_2:77334440-77334459 | Msa1078370:CDS | 25.0% |
| ! | TTTCTCAAGGTTTATTAGAT+TGG | - | chr7_2:77334453-77334472 | Msa1078370:CDS | 25.0% |
| ! | ACTACAAGACAAAATCAAAT+TGG | - | chr7_2:77334574-77334593 | Msa1078370:CDS | 25.0% |
| !! | TTACATAGATGTCAATTTTG+AGG | - | chr7_2:77334794-77334813 | Msa1078370:intron | 25.0% |
| !! | TACATAGATGTCAATTTTGA+GGG | - | chr7_2:77334795-77334814 | Msa1078370:intron | 25.0% |
| ! | TAAGAGAAAAACTATAGTCA+TGG | + | chr7_2:77335373-77335392 | None:intergenic | 25.0% |
| ! | TCTTTCAACAAATGGAATAT+AGG | + | chr7_2:77335437-77335456 | None:intergenic | 25.0% |
| ! | ATATGGAATCTTTCAACAAA+TGG | + | chr7_2:77335445-77335464 | None:intergenic | 25.0% |
| ! | TTCAAGCATGATATAATAGA+AGG | - | chr7_2:77335481-77335500 | Msa1078370:intron | 25.0% |
| ! | ATCAACAATTTCATTTGGAT+CGG | + | chr7_2:77335806-77335825 | None:intergenic | 25.0% |
| ! | AACATTGTGAGTTTAAAAAG+TGG | + | chr7_2:77335926-77335945 | None:intergenic | 25.0% |
| ! | TGTAAAGAAAAAAATAACGG+AGG | + | chr7_2:77334034-77334053 | None:intergenic | 25.0% |
| ! | AGTTGATTAAAACAAGACTA+AGG | + | chr7_2:77334367-77334386 | None:intergenic | 25.0% |
| !!! | TAATTTCAGTTGATTTGGTT+AGG | - | chr7_2:77334396-77334415 | Msa1078370:CDS | 25.0% |
| !!! | TAATTGTTTTGGTTTTCTCA+AGG | - | chr7_2:77334440-77334459 | Msa1078370:CDS | 25.0% |
| ! | TTTCTCAAGGTTTATTAGAT+TGG | - | chr7_2:77334453-77334472 | Msa1078370:CDS | 25.0% |
| ! | ACTACAAGACAAAATCAAAT+TGG | - | chr7_2:77334574-77334593 | Msa1078370:CDS | 25.0% |
| !! | TTACATAGATGTCAATTTTG+AGG | - | chr7_2:77334794-77334813 | Msa1078370:intron | 25.0% |
| !! | TACATAGATGTCAATTTTGA+GGG | - | chr7_2:77334795-77334814 | Msa1078370:intron | 25.0% |
| ! | TAAGAGAAAAACTATAGTCA+TGG | + | chr7_2:77335373-77335392 | None:intergenic | 25.0% |
| ! | TCTTTCAACAAATGGAATAT+AGG | + | chr7_2:77335437-77335456 | None:intergenic | 25.0% |
| ! | ATATGGAATCTTTCAACAAA+TGG | + | chr7_2:77335445-77335464 | None:intergenic | 25.0% |
| ! | TTCAAGCATGATATAATAGA+AGG | - | chr7_2:77335481-77335500 | Msa1078370:intron | 25.0% |
| ! | ATCAACAATTTCATTTGGAT+CGG | + | chr7_2:77335806-77335825 | None:intergenic | 25.0% |
| ! | AACATTGTGAGTTTAAAAAG+TGG | + | chr7_2:77335926-77335945 | None:intergenic | 25.0% |
| CTTGTGTCTCTGTTAAAAAT+AGG | + | chr7_2:77334002-77334021 | None:intergenic | 30.0% | |
| !!! | CTATTTTTAACAGAGACACA+AGG | - | chr7_2:77334000-77334019 | Msa1078370:three_prime_UTR | 30.0% |
| !!! | TTAAACACACCTTGTTTTCT+GGG | + | chr7_2:77334649-77334668 | None:intergenic | 30.0% |
| ! | ACATAGATGTCAATTTTGAG+GGG | - | chr7_2:77334796-77334815 | Msa1078370:intron | 30.0% |
| !! | GCTTTCAAGTTAAGAAATAG+AGG | - | chr7_2:77335022-77335041 | Msa1078370:intron | 30.0% |
| !!! | GCAAACTGAACTTTTGAAAT+TGG | - | chr7_2:77335068-77335087 | Msa1078370:CDS | 30.0% |
| !!! | TTGCCATTTTTCTTTTCTGT+TGG | - | chr7_2:77335201-77335220 | Msa1078370:intron | 30.0% |
| CAACCAACAGAAAAGAAAAA+TGG | + | chr7_2:77335207-77335226 | None:intergenic | 30.0% | |
| !! | TGTTATTGGTTGTGTTGATT+AGG | - | chr7_2:77335402-77335421 | Msa1078370:intron | 30.0% |
| ! | ATTCCATATAGTCTTTTCTG+AGG | - | chr7_2:77335456-77335475 | Msa1078370:CDS | 30.0% |
| AGCATGATATAATAGAAGGA+AGG | - | chr7_2:77335485-77335504 | Msa1078370:intron | 30.0% | |
| TCATAAACGAATGCAATTGT+GGG | + | chr7_2:77335571-77335590 | None:intergenic | 30.0% | |
| TTCATAAACGAATGCAATTG+TGG | + | chr7_2:77335572-77335591 | None:intergenic | 30.0% | |
| !! | TATTTTCAAGAAACGCTTTC+TGG | - | chr7_2:77335825-77335844 | Msa1078370:intron | 30.0% |
| TAAAAAGTGGCGAATACAAT+AGG | + | chr7_2:77335913-77335932 | None:intergenic | 30.0% | |
| CTTGTGTCTCTGTTAAAAAT+AGG | + | chr7_2:77334002-77334021 | None:intergenic | 30.0% | |
| !!! | CTATTTTTAACAGAGACACA+AGG | - | chr7_2:77334000-77334019 | Msa1078370:three_prime_UTR | 30.0% |
| !!! | TTAAACACACCTTGTTTTCT+GGG | + | chr7_2:77334649-77334668 | None:intergenic | 30.0% |
| ! | ACATAGATGTCAATTTTGAG+GGG | - | chr7_2:77334796-77334815 | Msa1078370:intron | 30.0% |
| !! | GCTTTCAAGTTAAGAAATAG+AGG | - | chr7_2:77335022-77335041 | Msa1078370:intron | 30.0% |
| !!! | GCAAACTGAACTTTTGAAAT+TGG | - | chr7_2:77335068-77335087 | Msa1078370:CDS | 30.0% |
| !!! | TTGCCATTTTTCTTTTCTGT+TGG | - | chr7_2:77335201-77335220 | Msa1078370:intron | 30.0% |
| CAACCAACAGAAAAGAAAAA+TGG | + | chr7_2:77335207-77335226 | None:intergenic | 30.0% | |
| !! | TGTTATTGGTTGTGTTGATT+AGG | - | chr7_2:77335402-77335421 | Msa1078370:intron | 30.0% |
| ! | ATTCCATATAGTCTTTTCTG+AGG | - | chr7_2:77335456-77335475 | Msa1078370:CDS | 30.0% |
| AGCATGATATAATAGAAGGA+AGG | - | chr7_2:77335485-77335504 | Msa1078370:intron | 30.0% | |
| TCATAAACGAATGCAATTGT+GGG | + | chr7_2:77335571-77335590 | None:intergenic | 30.0% | |
| TTCATAAACGAATGCAATTG+TGG | + | chr7_2:77335572-77335591 | None:intergenic | 30.0% | |
| !! | TATTTTCAAGAAACGCTTTC+TGG | - | chr7_2:77335825-77335844 | Msa1078370:intron | 30.0% |
| TAAAAAGTGGCGAATACAAT+AGG | + | chr7_2:77335913-77335932 | None:intergenic | 30.0% | |
| CTCAATTCTGTACAACGTTA+AGG | - | chr7_2:77333861-77333880 | Msa1078370:three_prime_UTR | 35.0% | |
| GTTAAAAATAGGAGGTGGAT+CGG | + | chr7_2:77333991-77334010 | None:intergenic | 35.0% | |
| TCTCTGTTAAAAATAGGAGG+TGG | + | chr7_2:77333996-77334015 | None:intergenic | 35.0% | |
| GTGTCTCTGTTAAAAATAGG+AGG | + | chr7_2:77333999-77334018 | None:intergenic | 35.0% | |
| ATGGATCGCTAGAAACTATA+AGG | - | chr7_2:77334153-77334172 | Msa1078370:intron | 35.0% | |
| ACTTTCTCCTTATACCAAAC+AGG | + | chr7_2:77334623-77334642 | None:intergenic | 35.0% | |
| !!! | GTTAAACACACCTTGTTTTC+TGG | + | chr7_2:77334650-77334669 | None:intergenic | 35.0% |
| !! | TGTGTTTAACTTGCTCATAC+AGG | - | chr7_2:77334660-77334679 | Msa1078370:intron | 35.0% |
| !! | GTGTTTAACTTGCTCATACA+GGG | - | chr7_2:77334661-77334680 | Msa1078370:intron | 35.0% |
| ! | CAATGAAGAGTACAGATCTT+TGG | + | chr7_2:77334972-77334991 | None:intergenic | 35.0% |
| GATCTGTACTCTTCATTGAA+AGG | - | chr7_2:77334974-77334993 | Msa1078370:intron | 35.0% | |
| !!! | GCATTACCAGCTTGTTTTAT+AGG | + | chr7_2:77335004-77335023 | None:intergenic | 35.0% |
| AGCATTCTCCAAGTAATCAA+AGG | + | chr7_2:77335113-77335132 | None:intergenic | 35.0% | |
| GCTCTTGGTAAATTTGATGA+TGG | - | chr7_2:77335130-77335149 | Msa1078370:CDS | 35.0% | |
| !! | TATTGGTTGTGTTGATTAGG+TGG | - | chr7_2:77335405-77335424 | Msa1078370:CDS | 35.0% |
| ACACCTCAGAAAAGACTATA+TGG | + | chr7_2:77335462-77335481 | None:intergenic | 35.0% | |
| ! | GGTTAAGTTTTCCTCAAGTT+CGG | + | chr7_2:77335620-77335639 | None:intergenic | 35.0% |
| GTGCATAATGTTTCTTTGAC+AGG | - | chr7_2:77335744-77335763 | Msa1078370:intron | 35.0% | |
| TTGATGCTTATACACAGACA+AGG | - | chr7_2:77335779-77335798 | Msa1078370:intron | 35.0% | |
| TGATGCTTATACACAGACAA+GGG | - | chr7_2:77335780-77335799 | Msa1078370:intron | 35.0% | |
| ! | ATGATGCTTTTCCATGTTGA+TGG | - | chr7_2:77336204-77336223 | Msa1078370:five_prime_UTR | 35.0% |
| TATTTCACCATCCATCAACA+TGG | + | chr7_2:77336218-77336237 | None:intergenic | 35.0% | |
| CTCAATTCTGTACAACGTTA+AGG | - | chr7_2:77333861-77333880 | Msa1078370:three_prime_UTR | 35.0% | |
| GTTAAAAATAGGAGGTGGAT+CGG | + | chr7_2:77333991-77334010 | None:intergenic | 35.0% | |
| TCTCTGTTAAAAATAGGAGG+TGG | + | chr7_2:77333996-77334015 | None:intergenic | 35.0% | |
| GTGTCTCTGTTAAAAATAGG+AGG | + | chr7_2:77333999-77334018 | None:intergenic | 35.0% | |
| ATGGATCGCTAGAAACTATA+AGG | - | chr7_2:77334153-77334172 | Msa1078370:intron | 35.0% | |
| ACTTTCTCCTTATACCAAAC+AGG | + | chr7_2:77334623-77334642 | None:intergenic | 35.0% | |
| !!! | GTTAAACACACCTTGTTTTC+TGG | + | chr7_2:77334650-77334669 | None:intergenic | 35.0% |
| !! | TGTGTTTAACTTGCTCATAC+AGG | - | chr7_2:77334660-77334679 | Msa1078370:intron | 35.0% |
| !! | GTGTTTAACTTGCTCATACA+GGG | - | chr7_2:77334661-77334680 | Msa1078370:intron | 35.0% |
| ! | CAATGAAGAGTACAGATCTT+TGG | + | chr7_2:77334972-77334991 | None:intergenic | 35.0% |
| GATCTGTACTCTTCATTGAA+AGG | - | chr7_2:77334974-77334993 | Msa1078370:intron | 35.0% | |
| !!! | GCATTACCAGCTTGTTTTAT+AGG | + | chr7_2:77335004-77335023 | None:intergenic | 35.0% |
| AGCATTCTCCAAGTAATCAA+AGG | + | chr7_2:77335113-77335132 | None:intergenic | 35.0% | |
| GCTCTTGGTAAATTTGATGA+TGG | - | chr7_2:77335130-77335149 | Msa1078370:CDS | 35.0% | |
| !! | TATTGGTTGTGTTGATTAGG+TGG | - | chr7_2:77335405-77335424 | Msa1078370:CDS | 35.0% |
| ACACCTCAGAAAAGACTATA+TGG | + | chr7_2:77335462-77335481 | None:intergenic | 35.0% | |
| ! | GGTTAAGTTTTCCTCAAGTT+CGG | + | chr7_2:77335620-77335639 | None:intergenic | 35.0% |
| GTGCATAATGTTTCTTTGAC+AGG | - | chr7_2:77335744-77335763 | Msa1078370:intron | 35.0% | |
| TTGATGCTTATACACAGACA+AGG | - | chr7_2:77335779-77335798 | Msa1078370:intron | 35.0% | |
| TGATGCTTATACACAGACAA+GGG | - | chr7_2:77335780-77335799 | Msa1078370:intron | 35.0% | |
| ! | ATGATGCTTTTCCATGTTGA+TGG | - | chr7_2:77336204-77336223 | Msa1078370:five_prime_UTR | 35.0% |
| TATTTCACCATCCATCAACA+TGG | + | chr7_2:77336218-77336237 | None:intergenic | 35.0% | |
| !!! | GTTTTTTCAGGAGCTTACTG+TGG | + | chr7_2:77333909-77333928 | None:intergenic | 40.0% |
| ! | TCATGATTGATGACCAATGC+AGG | - | chr7_2:77334550-77334569 | Msa1078370:CDS | 40.0% |
| ! | CATGATTGATGACCAATGCA+GGG | - | chr7_2:77334551-77334570 | Msa1078370:CDS | 40.0% |
| GGCATGTCTTGAAGGTTAAT+AGG | + | chr7_2:77334602-77334621 | None:intergenic | 40.0% | |
| AGACATGCCTGTTTGGTATA+AGG | - | chr7_2:77334613-77334632 | Msa1078370:CDS | 40.0% | |
| GAAAGTCTACCCAGAAAACA+AGG | - | chr7_2:77334637-77334656 | Msa1078370:intron | 40.0% | |
| GATCCTGCAAAGAAAGAGTT+TGG | - | chr7_2:77334914-77334933 | Msa1078370:CDS | 40.0% | |
| TCACCAAACTCTTTCTTTGC+AGG | + | chr7_2:77334920-77334939 | None:intergenic | 40.0% | |
| GGAGATCCTATAAAACAAGC+TGG | - | chr7_2:77334995-77335014 | Msa1078370:intron | 40.0% | |
| TTCTCCAAGTAATCAAAGGC+AGG | + | chr7_2:77335109-77335128 | None:intergenic | 40.0% | |
| GATTACTTGGAGAATGCTCT+TGG | - | chr7_2:77335115-77335134 | Msa1078370:CDS | 40.0% | |
| !! | GATGATGGACAATTCTTCCT+AGG | - | chr7_2:77335145-77335164 | Msa1078370:intron | 40.0% |
| TCTTCCTAGGACAATTCAGT+TGG | - | chr7_2:77335158-77335177 | Msa1078370:intron | 40.0% | |
| CTTCCTAGGACAATTCAGTT+GGG | - | chr7_2:77335159-77335178 | Msa1078370:intron | 40.0% | |
| TTACCCAACTGAATTGTCCT+AGG | + | chr7_2:77335165-77335184 | None:intergenic | 40.0% | |
| TAAAGCATGTGATGGTCTGA+TGG | - | chr7_2:77335279-77335298 | Msa1078370:CDS | 40.0% | |
| AACTTAACCTGTTCCGCAAA+TGG | - | chr7_2:77335631-77335650 | Msa1078370:intron | 40.0% | |
| TCCGCAAATGGAAACGAAAA+TGG | - | chr7_2:77335643-77335662 | Msa1078370:intron | 40.0% | |
| ! | CCCATTTTCGTTTCCATTTG+CGG | + | chr7_2:77335647-77335666 | None:intergenic | 40.0% |
| CCGCAAATGGAAACGAAAAT+GGG | - | chr7_2:77335644-77335663 | Msa1078370:intron | 40.0% | |
| AGAACTCTTGTTGAAGCTTG+AGG | + | chr7_2:77335684-77335703 | None:intergenic | 40.0% | |
| ATCTCGTGTTAACGAGACAT+CGG | + | chr7_2:77335718-77335737 | None:intergenic | 40.0% | |
| ! | CTCACAATGTTCTAACTTGC+AGG | - | chr7_2:77335935-77335954 | Msa1078370:intron | 40.0% |
| CAGGCTCAACAGTGAAAATT+GGG | - | chr7_2:77335954-77335973 | Msa1078370:intron | 40.0% | |
| ! | CAGTGAAAATTGGGTTGCAA+TGG | - | chr7_2:77335963-77335982 | Msa1078370:intron | 40.0% |
| !! | TGCTTTTCCATGTTGATGGA+TGG | - | chr7_2:77336208-77336227 | Msa1078370:five_prime_UTR | 40.0% |
| !!! | GTTTTTTCAGGAGCTTACTG+TGG | + | chr7_2:77333909-77333928 | None:intergenic | 40.0% |
| ! | TCATGATTGATGACCAATGC+AGG | - | chr7_2:77334550-77334569 | Msa1078370:CDS | 40.0% |
| ! | CATGATTGATGACCAATGCA+GGG | - | chr7_2:77334551-77334570 | Msa1078370:CDS | 40.0% |
| GGCATGTCTTGAAGGTTAAT+AGG | + | chr7_2:77334602-77334621 | None:intergenic | 40.0% | |
| AGACATGCCTGTTTGGTATA+AGG | - | chr7_2:77334613-77334632 | Msa1078370:CDS | 40.0% | |
| GAAAGTCTACCCAGAAAACA+AGG | - | chr7_2:77334637-77334656 | Msa1078370:intron | 40.0% | |
| GATCCTGCAAAGAAAGAGTT+TGG | - | chr7_2:77334914-77334933 | Msa1078370:CDS | 40.0% | |
| TCACCAAACTCTTTCTTTGC+AGG | + | chr7_2:77334920-77334939 | None:intergenic | 40.0% | |
| GGAGATCCTATAAAACAAGC+TGG | - | chr7_2:77334995-77335014 | Msa1078370:intron | 40.0% | |
| TTCTCCAAGTAATCAAAGGC+AGG | + | chr7_2:77335109-77335128 | None:intergenic | 40.0% | |
| GATTACTTGGAGAATGCTCT+TGG | - | chr7_2:77335115-77335134 | Msa1078370:CDS | 40.0% | |
| !! | GATGATGGACAATTCTTCCT+AGG | - | chr7_2:77335145-77335164 | Msa1078370:intron | 40.0% |
| TCTTCCTAGGACAATTCAGT+TGG | - | chr7_2:77335158-77335177 | Msa1078370:intron | 40.0% | |
| CTTCCTAGGACAATTCAGTT+GGG | - | chr7_2:77335159-77335178 | Msa1078370:intron | 40.0% | |
| TTACCCAACTGAATTGTCCT+AGG | + | chr7_2:77335165-77335184 | None:intergenic | 40.0% | |
| TAAAGCATGTGATGGTCTGA+TGG | - | chr7_2:77335279-77335298 | Msa1078370:CDS | 40.0% | |
| AACTTAACCTGTTCCGCAAA+TGG | - | chr7_2:77335631-77335650 | Msa1078370:intron | 40.0% | |
| TCCGCAAATGGAAACGAAAA+TGG | - | chr7_2:77335643-77335662 | Msa1078370:intron | 40.0% | |
| ! | CCCATTTTCGTTTCCATTTG+CGG | + | chr7_2:77335647-77335666 | None:intergenic | 40.0% |
| CCGCAAATGGAAACGAAAAT+GGG | - | chr7_2:77335644-77335663 | Msa1078370:intron | 40.0% | |
| AGAACTCTTGTTGAAGCTTG+AGG | + | chr7_2:77335684-77335703 | None:intergenic | 40.0% | |
| ATCTCGTGTTAACGAGACAT+CGG | + | chr7_2:77335718-77335737 | None:intergenic | 40.0% | |
| ! | CTCACAATGTTCTAACTTGC+AGG | - | chr7_2:77335935-77335954 | Msa1078370:intron | 40.0% |
| CAGGCTCAACAGTGAAAATT+GGG | - | chr7_2:77335954-77335973 | Msa1078370:intron | 40.0% | |
| ! | CAGTGAAAATTGGGTTGCAA+TGG | - | chr7_2:77335963-77335982 | Msa1078370:intron | 40.0% |
| !! | TGCTTTTCCATGTTGATGGA+TGG | - | chr7_2:77336208-77336227 | Msa1078370:five_prime_UTR | 40.0% |
| !! | AGCTTACTGTGGCTTGGTTT+GGG | + | chr7_2:77333898-77333917 | None:intergenic | 45.0% |
| GGATCGGAGTTGGAAGTTAA+CGG | + | chr7_2:77333975-77333994 | None:intergenic | 45.0% | |
| TTGTCTTGTAGTCCCTGCAT+TGG | + | chr7_2:77334566-77334585 | None:intergenic | 45.0% | |
| ACCTTCAAGACATGCCTGTT+TGG | - | chr7_2:77334606-77334625 | Msa1078370:CDS | 45.0% | |
| ACCAAACAGGCATGTCTTGA+AGG | + | chr7_2:77334610-77334629 | None:intergenic | 45.0% | |
| ! | GTATGTATAGGTGCCATCGT+TGG | - | chr7_2:77334728-77334747 | Msa1078370:intron | 45.0% |
| !!! | TCGATTTTTTTTGGGGGTGC+AGG | + | chr7_2:77334855-77334874 | None:intergenic | 45.0% |
| AGGTCCTGCCTTTGATTACT+TGG | - | chr7_2:77335102-77335121 | Msa1078370:CDS | 45.0% | |
| TCAATCCATGCTGCGAGTTT+CGG | + | chr7_2:77335511-77335530 | None:intergenic | 45.0% | |
| AGGTCATCAATCCGAACTTG+AGG | - | chr7_2:77335606-77335625 | Msa1078370:intron | 45.0% | |
| TTCGTTTCCATTTGCGGAAC+AGG | + | chr7_2:77335641-77335660 | None:intergenic | 45.0% | |
| CGAAAATGGGCCACAGAAAA+TGG | - | chr7_2:77335657-77335676 | Msa1078370:intron | 45.0% | |
| ! | AGCTTGAGGACCATTTTCTG+TGG | + | chr7_2:77335670-77335689 | None:intergenic | 45.0% |
| TAACGAGACATCGGAGGTAA+TGG | + | chr7_2:77335709-77335728 | None:intergenic | 45.0% | |
| GCAGGCTCAACAGTGAAAAT+TGG | - | chr7_2:77335953-77335972 | Msa1078370:intron | 45.0% | |
| !! | AGCTTACTGTGGCTTGGTTT+GGG | + | chr7_2:77333898-77333917 | None:intergenic | 45.0% |
| GGATCGGAGTTGGAAGTTAA+CGG | + | chr7_2:77333975-77333994 | None:intergenic | 45.0% | |
| TTGTCTTGTAGTCCCTGCAT+TGG | + | chr7_2:77334566-77334585 | None:intergenic | 45.0% | |
| ACCTTCAAGACATGCCTGTT+TGG | - | chr7_2:77334606-77334625 | Msa1078370:CDS | 45.0% | |
| ACCAAACAGGCATGTCTTGA+AGG | + | chr7_2:77334610-77334629 | None:intergenic | 45.0% | |
| ! | GTATGTATAGGTGCCATCGT+TGG | - | chr7_2:77334728-77334747 | Msa1078370:intron | 45.0% |
| !!! | TCGATTTTTTTTGGGGGTGC+AGG | + | chr7_2:77334855-77334874 | None:intergenic | 45.0% |
| AGGTCCTGCCTTTGATTACT+TGG | - | chr7_2:77335102-77335121 | Msa1078370:CDS | 45.0% | |
| TCAATCCATGCTGCGAGTTT+CGG | + | chr7_2:77335511-77335530 | None:intergenic | 45.0% | |
| AGGTCATCAATCCGAACTTG+AGG | - | chr7_2:77335606-77335625 | Msa1078370:intron | 45.0% | |
| TTCGTTTCCATTTGCGGAAC+AGG | + | chr7_2:77335641-77335660 | None:intergenic | 45.0% | |
| CGAAAATGGGCCACAGAAAA+TGG | - | chr7_2:77335657-77335676 | Msa1078370:intron | 45.0% | |
| ! | AGCTTGAGGACCATTTTCTG+TGG | + | chr7_2:77335670-77335689 | None:intergenic | 45.0% |
| TAACGAGACATCGGAGGTAA+TGG | + | chr7_2:77335709-77335728 | None:intergenic | 45.0% | |
| GCAGGCTCAACAGTGAAAAT+TGG | - | chr7_2:77335953-77335972 | Msa1078370:intron | 45.0% | |
| !!! | AATATTTTTATTTCTATATT+TGG | - | chr7_2:77334080-77334099 | Msa1078370:exon | 5.0% |
| !!! | AATATTTTTATTTCTATATT+TGG | - | chr7_2:77334080-77334099 | Msa1078370:exon | 5.0% |
| !! | GAGCTTACTGTGGCTTGGTT+TGG | + | chr7_2:77333899-77333918 | None:intergenic | 50.0% |
| TTCAGGAGCTTACTGTGGCT+TGG | + | chr7_2:77333904-77333923 | None:intergenic | 50.0% | |
| TCGGAGTTGGAAGTTAACGG+AGG | + | chr7_2:77333972-77333991 | None:intergenic | 50.0% | |
| AATAGGAGGTGGATCGGAGT+TGG | + | chr7_2:77333985-77334004 | None:intergenic | 50.0% | |
| ATCCATGCACGTTGTGCGTA+GGG | + | chr7_2:77334139-77334158 | None:intergenic | 50.0% | |
| TGCCATCGTTGGAGCACAAT+GGG | - | chr7_2:77334739-77334758 | Msa1078370:intron | 50.0% | |
| TTCCCATTGTGCTCCAACGA+TGG | + | chr7_2:77334744-77334763 | None:intergenic | 50.0% | |
| ATCGTTGGAGCACAATGGGA+AGG | - | chr7_2:77334743-77334762 | Msa1078370:intron | 50.0% | |
| GAGCACAATGGGAAGGTCTT+GGG | - | chr7_2:77334750-77334769 | Msa1078370:intron | 50.0% | |
| CTCACACTGGGAACTAGAGA+TGG | + | chr7_2:77334822-77334841 | None:intergenic | 50.0% | |
| !! | GGAGAGTGCTTTCTCACACT+GGG | + | chr7_2:77334834-77334853 | None:intergenic | 50.0% |
| !! | AGGAGAGTGCTTTCTCACAC+TGG | + | chr7_2:77334835-77334854 | None:intergenic | 50.0% |
| ! | TGTGATGGTCTGATGGATCG+CGG | - | chr7_2:77335286-77335305 | Msa1078370:CDS | 50.0% |
| ! | GAAACTCGCAGCATGGATTG+AGG | - | chr7_2:77335510-77335529 | Msa1078370:intron | 50.0% |
| TCGTGTTAACGAGACATCGG+AGG | + | chr7_2:77335715-77335734 | None:intergenic | 50.0% | |
| TTGCAATGGCACCCTTTGAG+AGG | - | chr7_2:77335977-77335996 | Msa1078370:intron | 50.0% | |
| GCAGCAGTCTACCTCTCAAA+GGG | + | chr7_2:77335991-77336010 | None:intergenic | 50.0% | |
| !! | GAGCTTACTGTGGCTTGGTT+TGG | + | chr7_2:77333899-77333918 | None:intergenic | 50.0% |
| TTCAGGAGCTTACTGTGGCT+TGG | + | chr7_2:77333904-77333923 | None:intergenic | 50.0% | |
| TCGGAGTTGGAAGTTAACGG+AGG | + | chr7_2:77333972-77333991 | None:intergenic | 50.0% | |
| AATAGGAGGTGGATCGGAGT+TGG | + | chr7_2:77333985-77334004 | None:intergenic | 50.0% | |
| ATCCATGCACGTTGTGCGTA+GGG | + | chr7_2:77334139-77334158 | None:intergenic | 50.0% | |
| TGCCATCGTTGGAGCACAAT+GGG | - | chr7_2:77334739-77334758 | Msa1078370:intron | 50.0% | |
| TTCCCATTGTGCTCCAACGA+TGG | + | chr7_2:77334744-77334763 | None:intergenic | 50.0% | |
| ATCGTTGGAGCACAATGGGA+AGG | - | chr7_2:77334743-77334762 | Msa1078370:intron | 50.0% | |
| GAGCACAATGGGAAGGTCTT+GGG | - | chr7_2:77334750-77334769 | Msa1078370:intron | 50.0% | |
| CTCACACTGGGAACTAGAGA+TGG | + | chr7_2:77334822-77334841 | None:intergenic | 50.0% | |
| !! | GGAGAGTGCTTTCTCACACT+GGG | + | chr7_2:77334834-77334853 | None:intergenic | 50.0% |
| !! | AGGAGAGTGCTTTCTCACAC+TGG | + | chr7_2:77334835-77334854 | None:intergenic | 50.0% |
| ! | TGTGATGGTCTGATGGATCG+CGG | - | chr7_2:77335286-77335305 | Msa1078370:CDS | 50.0% |
| ! | GAAACTCGCAGCATGGATTG+AGG | - | chr7_2:77335510-77335529 | Msa1078370:intron | 50.0% |
| TCGTGTTAACGAGACATCGG+AGG | + | chr7_2:77335715-77335734 | None:intergenic | 50.0% | |
| TTGCAATGGCACCCTTTGAG+AGG | - | chr7_2:77335977-77335996 | Msa1078370:intron | 50.0% | |
| GCAGCAGTCTACCTCTCAAA+GGG | + | chr7_2:77335991-77336010 | None:intergenic | 50.0% | |
| GATCCATGCACGTTGTGCGT+AGG | + | chr7_2:77334140-77334159 | None:intergenic | 55.0% | |
| GTGCCATCGTTGGAGCACAA+TGG | - | chr7_2:77334738-77334757 | Msa1078370:intron | 55.0% | |
| GGAGCACAATGGGAAGGTCT+TGG | - | chr7_2:77334749-77334768 | Msa1078370:intron | 55.0% | |
| GGCAGCAGTCTACCTCTCAA+AGG | + | chr7_2:77335992-77336011 | None:intergenic | 55.0% | |
| GATCCATGCACGTTGTGCGT+AGG | + | chr7_2:77334140-77334159 | None:intergenic | 55.0% | |
| GTGCCATCGTTGGAGCACAA+TGG | - | chr7_2:77334738-77334757 | Msa1078370:intron | 55.0% | |
| GGAGCACAATGGGAAGGTCT+TGG | - | chr7_2:77334749-77334768 | Msa1078370:intron | 55.0% | |
| GGCAGCAGTCTACCTCTCAA+AGG | + | chr7_2:77335992-77336011 | None:intergenic | 55.0% | |
| GTCCCTACGCACAACGTGCA+TGG | - | chr7_2:77334134-77334153 | Msa1078370:intron | 60.0% | |
| GAAGGCCGAAACTCGCAGCA+TGG | - | chr7_2:77335503-77335522 | Msa1078370:intron | 60.0% | |
| GTCCCTACGCACAACGTGCA+TGG | - | chr7_2:77334134-77334153 | Msa1078370:intron | 60.0% | |
| GAAGGCCGAAACTCGCAGCA+TGG | - | chr7_2:77335503-77335522 | Msa1078370:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 77333813 | 77336250 | 77333813 | ID=Msa1078370;Name=Msa1078370 |
| chr7_2 | mRNA | 77333813 | 77336250 | 77333813 | ID=Msa1078370-mRNA-1;Parent=Msa1078370;Name=Msa1078370-mRNA-1;_AED=0.13;_eAED=0.13;_QI=126|0.87|0.77|1|1|1|9|282|285 |
| chr7_2 | exon | 77333813 | 77334106 | 77333813 | ID=Msa1078370-mRNA-1:exon:18949;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77334217 | 77334297 | 77334217 | ID=Msa1078370-mRNA-1:exon:18948;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77334385 | 77334639 | 77334385 | ID=Msa1078370-mRNA-1:exon:18947;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77334883 | 77334959 | 77334883 | ID=Msa1078370-mRNA-1:exon:18946;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77335047 | 77335149 | 77335047 | ID=Msa1078370-mRNA-1:exon:18945;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77335227 | 77335325 | 77335227 | ID=Msa1078370-mRNA-1:exon:18944;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77335405 | 77335491 | 77335405 | ID=Msa1078370-mRNA-1:exon:18943;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77335889 | 77335949 | 77335889 | ID=Msa1078370-mRNA-1:exon:18942;Parent=Msa1078370-mRNA-1 |
| chr7_2 | exon | 77336042 | 77336250 | 77336042 | ID=Msa1078370-mRNA-1:exon:18941;Parent=Msa1078370-mRNA-1 |
| chr7_2 | five_prime_UTR | 77336125 | 77336250 | 77336125 | ID=Msa1078370-mRNA-1:five_prime_utr;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77336042 | 77336124 | 77336042 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77335889 | 77335949 | 77335889 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77335405 | 77335491 | 77335405 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77335227 | 77335325 | 77335227 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77335047 | 77335149 | 77335047 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77334883 | 77334959 | 77334883 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77334385 | 77334639 | 77334385 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77334217 | 77334297 | 77334217 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | CDS | 77334095 | 77334106 | 77334095 | ID=Msa1078370-mRNA-1:cds;Parent=Msa1078370-mRNA-1 |
| chr7_2 | three_prime_UTR | 77333813 | 77334094 | 77333813 | ID=Msa1078370-mRNA-1:three_prime_utr;Parent=Msa1078370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
