Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081470 | XP_013450297.1 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 765 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081470 | sp|Q9M2G7|LPPD_ARATH | 65.196 | 408 | 123 | 1 | 1 | 389 | 9 | 416 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081470 | G8A197 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 765 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1041410 | Msa1081470 | 0.928722 | 1.930014e-92 | -8.615850e-47 |
| Msa1081470 | Msa1166600 | 0.924964 | 3.479287e-90 | -8.615850e-47 |
| Msa1081470 | Msa1402430 | 0.985233 | 6.208894e-163 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081470 | MtrunA17_Chr7g0268351 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 765 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081470 | AT3G58490.1 | 65.196 | 408 | 123 | 1 | 1 | 389 | 9 | 416 | 0.0 | 565 |
| Msa1081470 | AT3G58490.2 | 66.562 | 317 | 87 | 1 | 92 | 389 | 30 | 346 | 2.15e-161 | 457 |
Find 116 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAATGTTCTTCAGGTTTC+TGG | 0.066140 | 7_2:-81235802 | Msa1081470:intron |
| CTTAATACAGTTTGCTTATC+TGG | 0.089322 | 7_2:-81237945 | Msa1081470:CDS |
| ATTCCAACCGAATCCATTTA+TGG | 0.170135 | 7_2:-81238994 | None:intergenic |
| CAAGAAAATGCTTTGGAATA+TGG | 0.194037 | 7_2:-81237987 | Msa1081470:CDS |
| GTTGTTGCTGGCCTATTTAT+TGG | 0.246125 | 7_2:-81237139 | Msa1081470:CDS |
| GCTTTAATTTGAGCCATAAA+TGG | 0.267284 | 7_2:+81238981 | None:intergenic |
| TTTGGGTTATGCAGAGTTAC+AGG | 0.286499 | 7_2:-81238435 | Msa1081470:intron |
| TTCTTGGTGGAATTCTCTTC+TGG | 0.291249 | 7_2:-81238665 | Msa1081470:CDS |
| GACTCGGAATCCTTGGACTT+TGG | 0.316676 | 7_2:-81237117 | Msa1081470:CDS |
| GGGATAAAAGCAGTGTAAAA+TGG | 0.320919 | 7_2:+81238361 | None:intergenic |
| TTCCCTTGCTTGCTTGTTTG+TGG | 0.322437 | 7_2:-81237306 | Msa1081470:CDS |
| GGATTCCGAGTCCAATAAAT+AGG | 0.341580 | 7_2:+81237128 | None:intergenic |
| TGAATGTTCTTCAGGTTTCT+GGG | 0.347452 | 7_2:-81235801 | Msa1081470:intron |
| AAACTTGGAGTTGGAAGTTC+AGG | 0.348718 | 7_2:+81236820 | None:intergenic |
| AGTTTGATTGATGTTGTTGC+TGG | 0.357835 | 7_2:-81237151 | Msa1081470:CDS |
| ACCTGGATCTGGAGGAGAAA+TGG | 0.362260 | 7_2:+81238555 | None:intergenic |
| TGCTTGTTTGTGGCTCTTGT+TGG | 0.362453 | 7_2:-81237296 | Msa1081470:CDS |
| ACCTATATCCCCACATTGAA+TGG | 0.364000 | 7_2:-81235580 | Msa1081470:CDS |
| GAAATAGTAAGCTGGCTTGC+TGG | 0.371019 | 7_2:+81238822 | None:intergenic |
| TGTTTATTGCTTAGTTCGTC+TGG | 0.375962 | 7_2:+81235244 | None:intergenic |
| GCAGTAAGACTCTTGCAAAA+TGG | 0.377467 | 7_2:-81235651 | Msa1081470:CDS |
| CTGGAGGAGAAATGGGGTTC+CGG | 0.378158 | 7_2:+81238563 | None:intergenic |
| ACTGACAGTGCTTGTATTCA+TGG | 0.384822 | 7_2:-81235719 | Msa1081470:CDS |
| CCTGGATCTGGAGGAGAAAT+GGG | 0.387202 | 7_2:+81238556 | None:intergenic |
| TTTGTGGCTCTTGTTGGTTT+AGG | 0.391774 | 7_2:-81237290 | Msa1081470:intron |
| ATAGACAGTTTCGTGGTCTC+AGG | 0.395623 | 7_2:-81237076 | Msa1081470:CDS |
| CCCATTCAATGTGGGGATAT+AGG | 0.396341 | 7_2:+81235579 | None:intergenic |
| AAGTAGCCTTCGATAGGAAT+TGG | 0.400587 | 7_2:-81235222 | Msa1081470:three_prime_UTR |
| GGTGCCTATATTACTTACTT+TGG | 0.410570 | 7_2:-81237332 | Msa1081470:CDS |
| ACCATGCAAGACCTGCATAT+TGG | 0.414363 | 7_2:+81235500 | None:intergenic |
| CCTATATCCCCACATTGAAT+GGG | 0.420666 | 7_2:-81235579 | Msa1081470:CDS |
| TTTGTAGGAAGAATTTATCT+TGG | 0.420992 | 7_2:-81237181 | Msa1081470:intron |
| AAGAAAGAAATGAGAAACTT+TGG | 0.421753 | 7_2:+81238791 | None:intergenic |
| ACTGGTGGAGATGCAGGTCT+TGG | 0.428353 | 7_2:+81238038 | None:intergenic |
| ATTTGAGCCATAAATGGATT+CGG | 0.431147 | 7_2:+81238987 | None:intergenic |
| AACTCCAAAGTAAGTAATAT+AGG | 0.432966 | 7_2:+81237328 | None:intergenic |
| TTTATTGGACTCGGAATCCT+TGG | 0.433430 | 7_2:-81237124 | Msa1081470:CDS |
| CTGTGCCAAGGTGCGATTCT+TGG | 0.437065 | 7_2:-81238681 | Msa1081470:CDS |
| GAGTTTCACACTGCTTTCAA+TGG | 0.438556 | 7_2:-81236796 | Msa1081470:CDS |
| GCTTTCAATGGTGTTGCATT+GGG | 0.446391 | 7_2:-81236784 | Msa1081470:CDS |
| CTTGAATTTGAGTATGAGTC+AGG | 0.447504 | 7_2:+81237354 | None:intergenic |
| TCCAATATGCAGGTCTTGCA+TGG | 0.448223 | 7_2:-81235501 | Msa1081470:CDS |
| AGATGAGCAAGAAAATGCTT+TGG | 0.451289 | 7_2:-81237994 | Msa1081470:CDS |
| CTCCTCACTGGTGGAGATGC+AGG | 0.451870 | 7_2:+81238032 | None:intergenic |
| ACATTGAATGGGGCTAAGAC+TGG | 0.454763 | 7_2:-81235568 | Msa1081470:CDS |
| TAGTAAGCTGGCTTGCTGGC+TGG | 0.455410 | 7_2:+81238826 | None:intergenic |
| TTAATACAGTTTGCTTATCT+GGG | 0.458973 | 7_2:-81237944 | Msa1081470:intron |
| CCCATTTCTCCTCCAGATCC+AGG | 0.459052 | 7_2:-81238556 | Msa1081470:intron |
| TGCTTTCAATGGTGTTGCAT+TGG | 0.459262 | 7_2:-81236785 | Msa1081470:CDS |
| ATTCATGGGAAGAATGCTCT+TGG | 0.465240 | 7_2:-81235704 | Msa1081470:CDS |
| TCGTCGAGATGAAATTTCAC+TGG | 0.468374 | 7_2:+81235345 | None:intergenic |
| AAGGCTTTCGACGTTGATAC+CGG | 0.469002 | 7_2:-81235535 | Msa1081470:CDS |
| GACGAGAATTCACCGAAGGC+TGG | 0.469167 | 7_2:-81235327 | Msa1081470:three_prime_UTR |
| ATGCATACCCAAAATAACAT+AGG | 0.471564 | 7_2:+81238340 | None:intergenic |
| GTCTTAGCCCCATTCAATGT+GGG | 0.476496 | 7_2:+81235571 | None:intergenic |
| GAGCCACAAACAAGCAAGCA+AGG | 0.478723 | 7_2:+81237303 | None:intergenic |
| GAGTCAGGACATAGTGCAAA+AGG | 0.482369 | 7_2:+81237369 | None:intergenic |
| CTGACTCATACTCAAATTCA+AGG | 0.485216 | 7_2:-81237353 | Msa1081470:CDS |
| GTATTAAGTGTGTGAGAAGA+AGG | 0.494461 | 7_2:+81237960 | None:intergenic |
| ATTAGATTTCTCCAATATGC+AGG | 0.497088 | 7_2:-81235511 | Msa1081470:CDS |
| CCCGTGGTAGCAAACACATT+GGG | 0.500346 | 7_2:-81235622 | Msa1081470:CDS |
| GTCACTCACTATGTTCAATC+CGG | 0.503422 | 7_2:-81238582 | Msa1081470:CDS |
| CCCAATGTGTTTGCTACCAC+GGG | 0.503942 | 7_2:+81235622 | None:intergenic |
| GCTGGCCTATTTATTGGACT+CGG | 0.504462 | 7_2:-81237133 | Msa1081470:CDS |
| GTAGAGTGGTCATGGTCAAT+TGG | 0.504695 | 7_2:-81238252 | Msa1081470:intron |
| GTAGCAGTTACTCTCCTCAC+TGG | 0.505620 | 7_2:+81238020 | None:intergenic |
| TTATCTAGGGAACTGTATAA+AGG | 0.513298 | 7_2:-81238195 | Msa1081470:intron |
| GGAGTTGGAAGTTCAGGAGT+TGG | 0.515222 | 7_2:+81236826 | None:intergenic |
| TTCGTGTATGAAAAGATAGA+TGG | 0.520058 | 7_2:+81235460 | None:intergenic |
| TGAAACTCAAAACTTGGAGT+TGG | 0.527338 | 7_2:+81236811 | None:intergenic |
| GCAGTGTGAAACTCAAAACT+TGG | 0.530399 | 7_2:+81236805 | None:intergenic |
| TTGGATAAGCAAAGAGCAGT+AGG | 0.537394 | 7_2:+81236845 | None:intergenic |
| GCCCAATGTGTTTGCTACCA+CGG | 0.540876 | 7_2:+81235621 | None:intergenic |
| GCTTCTGTGTAGAGTGGTCA+TGG | 0.542830 | 7_2:-81238260 | Msa1081470:intron |
| TTGAAACAGAAATAGTAAGC+TGG | 0.547337 | 7_2:+81238814 | None:intergenic |
| TAGGCAGATGACGTTGTTGA+TGG | 0.550670 | 7_2:-81238228 | Msa1081470:CDS |
| TGCATACCCAAAATAACATA+GGG | 0.552178 | 7_2:+81238341 | None:intergenic |
| GAGGTAAATATGCAAATCAC+AGG | 0.552763 | 7_2:+81235437 | None:intergenic |
| CGTCGAGATGAAATTTCACT+GGG | 0.553071 | 7_2:+81235346 | None:intergenic |
| TTCATGGGAAGAATGCTCTT+GGG | 0.553751 | 7_2:-81235703 | Msa1081470:CDS |
| TGCCAAGGTGCGATTCTTGG+TGG | 0.554208 | 7_2:-81238678 | Msa1081470:CDS |
| ATATTGGAGAAATCTAATTC+CGG | 0.556168 | 7_2:+81235516 | None:intergenic |
| TGAATACATAGACAGTTTCG+TGG | 0.564407 | 7_2:-81237083 | Msa1081470:CDS |
| GAAGCTTGAGAGTGAGATTG+AGG | 0.567478 | 7_2:+81238625 | None:intergenic |
| AGCCACAAACAAGCAAGCAA+GGG | 0.567668 | 7_2:+81237304 | None:intergenic |
| GTGGTCATGGTCAATTGGCT+AGG | 0.568631 | 7_2:-81238247 | Msa1081470:CDS |
| TAGACAGTTTCGTGGTCTCA+GGG | 0.569578 | 7_2:-81237075 | Msa1081470:CDS |
| GAATGTTCTTCAGGTTTCTG+GGG | 0.580420 | 7_2:-81235800 | Msa1081470:intron |
| TTGGGTTATGCAGAGTTACA+GGG | 0.581088 | 7_2:-81238434 | Msa1081470:intron |
| AGATTGAAGAACATCTTCGA+TGG | 0.584691 | 7_2:+81235274 | None:intergenic |
| ATAAACAAGTAGCCTTCGAT+AGG | 0.585546 | 7_2:-81235228 | Msa1081470:three_prime_UTR |
| CTGACAGTGCTTGTATTCAT+GGG | 0.586833 | 7_2:-81235718 | Msa1081470:CDS |
| AATTTCACGATTAGAATCGT+AGG | 0.590889 | 7_2:+81235676 | None:intergenic |
| CAACTGTAAGCCAAAGTCCA+AGG | 0.591678 | 7_2:+81237107 | None:intergenic |
| ATTAGTCCAATTCCTATCGA+AGG | 0.596421 | 7_2:+81235216 | None:intergenic |
| GCAGTTACTCTCCTCACTGG+TGG | 0.601958 | 7_2:+81238023 | None:intergenic |
| TCCCGTGGTAGCAAACACAT+TGG | 0.609245 | 7_2:-81235623 | Msa1081470:CDS |
| ATGAAAAGATAGATGGCACT+AGG | 0.612679 | 7_2:+81235467 | None:intergenic |
| TGCAAAATGGATAATTCCCG+TGG | 0.613589 | 7_2:-81235638 | Msa1081470:CDS |
| AGTCTTAGCCCCATTCAATG+TGG | 0.617212 | 7_2:+81235570 | None:intergenic |
| GTTATGCAGAGTTACAGGGC+TGG | 0.618352 | 7_2:-81238430 | Msa1081470:intron |
| GAAAATTCATCACTGTGCCA+AGG | 0.630218 | 7_2:-81238693 | Msa1081470:CDS |
| TAAGACTGGAGAAAAGTCAA+AGG | 0.630797 | 7_2:-81235554 | Msa1081470:CDS |
| CGAGATGAAATTTCACTGGG+TGG | 0.632988 | 7_2:+81235349 | None:intergenic |
| TGAACATAGTGAGTGACGAA+AGG | 0.636744 | 7_2:+81238588 | None:intergenic |
| TTCCACCAAGAATCGCACCT+TGG | 0.638229 | 7_2:+81238676 | None:intergenic |
| CTATATCCCCACATTGAATG+GGG | 0.639865 | 7_2:-81235578 | Msa1081470:CDS |
| TGCAGGTCTTGCATGGTCTG+TGG | 0.652360 | 7_2:-81235494 | Msa1081470:CDS |
| CTGGATCTGGAGGAGAAATG+GGG | 0.663508 | 7_2:+81238557 | None:intergenic |
| TCTTAGCCCCATTCAATGTG+GGG | 0.667373 | 7_2:+81235572 | None:intergenic |
| CAGTGCTGTGGTGAAACTGA+TGG | 0.676045 | 7_2:+81235764 | None:intergenic |
| TCTCGACGAGAATTCACCGA+AGG | 0.677592 | 7_2:-81235331 | Msa1081470:three_prime_UTR |
| ATTCAATGTGGGGATATAGG+TGG | 0.679967 | 7_2:+81235582 | None:intergenic |
| ACAAACGAGGAACAGTGCTG+TGG | 0.694315 | 7_2:+81235752 | None:intergenic |
| GACCTGCATCTCCACCAGTG+AGG | 0.716851 | 7_2:-81238034 | Msa1081470:CDS |
| AGTTCTGAAGAGAACAAACG+AGG | 0.763056 | 7_2:+81235739 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACTAAAATAAAAGA+GGG | + | chr7_2:81235275-81235294 | None:intergenic | 10.0% |
| !! | AAAAAATACTAAAATAAAAG+AGG | + | chr7_2:81235276-81235295 | None:intergenic | 10.0% |
| !! | AAATTAAATAAGTATAAACA+TGG | - | chr7_2:81236659-81236678 | Msa1081470:intron | 10.0% |
| !! | ACAAAAATTAAATAAAATAG+AGG | + | chr7_2:81238780-81238799 | None:intergenic | 10.0% |
| !!! | TTTTAAGAGAATGAAATTAT+GGG | + | chr7_2:81235683-81235702 | None:intergenic | 15.0% |
| !!! | TTTTTAAGAGAATGAAATTA+TGG | + | chr7_2:81235684-81235703 | None:intergenic | 15.0% |
| !! | TTAAAAAACTGTGAATTTAT+TGG | - | chr7_2:81235906-81235925 | Msa1081470:intron | 15.0% |
| !!! | ATATTTCTTATCTATTTTCT+GGG | - | chr7_2:81236616-81236635 | Msa1081470:intron | 15.0% |
| !!! | TTTATTTAATTTTTGTACAG+AGG | - | chr7_2:81238784-81238803 | Msa1081470:five_prime_UTR | 15.0% |
| !!! | TTATTTAATTTTTGTACAGA+GGG | - | chr7_2:81238785-81238804 | Msa1081470:five_prime_UTR | 15.0% |
| !!! | TTTTTAGAATACTAAGAAAG+TGG | - | chr7_2:81235291-81235310 | Msa1081470:three_prime_UTR | 20.0% |
| !! | GATAATAACAAGAACAAAAA+TGG | - | chr7_2:81235480-81235499 | Msa1081470:CDS | 20.0% |
| !! | TTTAAGAGAATGAAATTATG+GGG | + | chr7_2:81235682-81235701 | None:intergenic | 20.0% |
| !!! | TTTTATCCCTATGTTATTTT+GGG | - | chr7_2:81235848-81235867 | Msa1081470:intron | 20.0% |
| !!! | TTTTAATTGAAAACTTTCCA+TGG | - | chr7_2:81236400-81236419 | Msa1081470:intron | 20.0% |
| !!! | CATATTTCTTATCTATTTTC+TGG | - | chr7_2:81236615-81236634 | Msa1081470:intron | 20.0% |
| !! | AATCAATTTAAACTGATGAT+CGG | + | chr7_2:81236718-81236737 | None:intergenic | 20.0% |
| !! | ATAAGATAAGTTAGAATACA+AGG | + | chr7_2:81237287-81237306 | None:intergenic | 20.0% |
| !! | ATATAATCTCGTAATTGTAT+AGG | - | chr7_2:81237519-81237538 | Msa1081470:intron | 20.0% |
| !! | TATAATCTCGTAATTGTATA+GGG | - | chr7_2:81237520-81237539 | Msa1081470:intron | 20.0% |
| !!! | TATTTAATTTTTGTACAGAG+GGG | - | chr7_2:81238786-81238805 | Msa1081470:five_prime_UTR | 20.0% |
| !! | TTCTTTGAGAAAGAAAAAAG+TGG | + | chr7_2:81235239-81235258 | None:intergenic | 25.0% |
| ! | AAGAAAGAAATGAGAAACTT+TGG | + | chr7_2:81235407-81235426 | None:intergenic | 25.0% |
| !!! | CTTTTATCCCTATGTTATTT+TGG | - | chr7_2:81235847-81235866 | Msa1081470:intron | 25.0% |
| ! | ACTGTGAATTTATTGGAATT+TGG | - | chr7_2:81235913-81235932 | Msa1081470:intron | 25.0% |
| ! | GTTGTTGTATTTGATGTTTA+TGG | - | chr7_2:81236086-81236105 | Msa1081470:intron | 25.0% |
| !! | TTAATACAGTTTGCTTATCT+GGG | - | chr7_2:81236251-81236270 | Msa1081470:intron | 25.0% |
| !! | CATTTTTATGCATGTGAAAT+TGG | - | chr7_2:81236279-81236298 | Msa1081470:intron | 25.0% |
| ! | TTAACTCTTTAGACATCTAT+AGG | - | chr7_2:81236337-81236356 | Msa1081470:intron | 25.0% |
| ! | ATCATGTAACTTGAATTGTA+AGG | + | chr7_2:81236588-81236607 | None:intergenic | 25.0% |
| !! | CATTAATATATGTTTTCCCT+TGG | - | chr7_2:81236784-81236803 | Msa1081470:CDS | 25.0% |
| ! | AACTCCAAAGTAAGTAATAT+AGG | + | chr7_2:81236870-81236889 | None:intergenic | 25.0% |
| ! | TATTACTTCTAATCTGTTAG+TGG | - | chr7_2:81236938-81236957 | Msa1081470:intron | 25.0% |
| !!! | AATTGTTTGTTACCTTTTGT+AGG | - | chr7_2:81236999-81237018 | Msa1081470:intron | 25.0% |
| ! | AGATAAATTCTTCCTACAAA+AGG | + | chr7_2:81237014-81237033 | None:intergenic | 25.0% |
| ! | TTTGTAGGAAGAATTTATCT+TGG | - | chr7_2:81237014-81237033 | Msa1081470:intron | 25.0% |
| !! | CTAACTTATCTTATGTGTTT+TGG | - | chr7_2:81237293-81237312 | Msa1081470:CDS | 25.0% |
| ! | TACAAAATGTCGTCAAATAA+TGG | - | chr7_2:81237719-81237738 | Msa1081470:intron | 25.0% |
| ! | TTCAAATTCTGAATGTTTCT+AGG | - | chr7_2:81237883-81237902 | Msa1081470:intron | 25.0% |
| !! | TCAAATTCTGAATGTTTCTA+GGG | - | chr7_2:81237884-81237903 | Msa1081470:intron | 25.0% |
| ! | TTTAATTGTGAATGTTCTTC+AGG | - | chr7_2:81238386-81238405 | Msa1081470:CDS | 25.0% |
| !!! | TATAGGTGGTTGATTTTATT+GGG | + | chr7_2:81238602-81238621 | None:intergenic | 25.0% |
| !!! | ATATAGGTGGTTGATTTTAT+TGG | + | chr7_2:81238603-81238622 | None:intergenic | 25.0% |
| ! | ATATTGGAGAAATCTAATTC+CGG | + | chr7_2:81238682-81238701 | None:intergenic | 25.0% |
| !! | GCTTTAATTTGAGCCATAAA+TGG | + | chr7_2:81235217-81235236 | None:intergenic | 30.0% |
| TTGAAACAGAAATAGTAAGC+TGG | + | chr7_2:81235384-81235403 | None:intergenic | 30.0% | |
| !!! | TATCTCGATGCTATTTTTTC+TGG | - | chr7_2:81235789-81235808 | Msa1081470:CDS | 30.0% |
| !!! | ATCTCGATGCTATTTTTTCT+GGG | - | chr7_2:81235790-81235809 | Msa1081470:CDS | 30.0% |
| TGCATACCCAAAATAACATA+GGG | + | chr7_2:81235857-81235876 | None:intergenic | 30.0% | |
| ATGCATACCCAAAATAACAT+AGG | + | chr7_2:81235858-81235877 | None:intergenic | 30.0% | |
| TTATCTAGGGAACTGTATAA+AGG | - | chr7_2:81236000-81236019 | Msa1081470:intron | 30.0% | |
| ATTTGATGTTTATGGACTCA+AGG | - | chr7_2:81236094-81236113 | Msa1081470:intron | 30.0% | |
| !!! | TTGTTGTTTTGTCACACTAA+AGG | - | chr7_2:81236120-81236139 | Msa1081470:intron | 30.0% |
| !! | CAAGAAAATGCTTTGGAATA+TGG | - | chr7_2:81236208-81236227 | Msa1081470:intron | 30.0% |
| ! | CTTAATACAGTTTGCTTATC+TGG | - | chr7_2:81236250-81236269 | Msa1081470:intron | 30.0% |
| ! | AGTTTTCCGTAAGTGAATAA+CGG | - | chr7_2:81236369-81236388 | Msa1081470:intron | 30.0% |
| AATTTGCCGTTATTCACTTA+CGG | + | chr7_2:81236378-81236397 | None:intergenic | 30.0% | |
| ! | AACAAATATCTGAAATGCCT+AGG | + | chr7_2:81236433-81236452 | None:intergenic | 30.0% |
| CTCTGACCAAATAATTGATT+AGG | - | chr7_2:81236554-81236573 | Msa1081470:intron | 30.0% | |
| TGCACACCTAATCAATTATT+TGG | + | chr7_2:81236563-81236582 | None:intergenic | 30.0% | |
| ! | TTTTTCCAATCCTTCTTAGT+TGG | + | chr7_2:81236642-81236661 | None:intergenic | 30.0% |
| ! | TCATTGTTCTGTTTTGCAAT+AGG | + | chr7_2:81236978-81236997 | None:intergenic | 30.0% |
| GTGCTGAAATATTCATTTAG+AGG | + | chr7_2:81237158-81237177 | None:intergenic | 30.0% | |
| CACTTCGATAACATTAAAAG+AGG | + | chr7_2:81237454-81237473 | None:intergenic | 30.0% | |
| ATAGACAAAAAGAGGAGTTT+GGG | - | chr7_2:81237596-81237615 | Msa1081470:intron | 30.0% | |
| TTGCTAAATAGCGCTTATAA+CGG | - | chr7_2:81237636-81237655 | Msa1081470:intron | 30.0% | |
| ! | AATTTGTTCAGATTCCTTCA+CGG | + | chr7_2:81237669-81237688 | None:intergenic | 30.0% |
| ! | GCTCTAGATTACTTAAGTAT+TGG | - | chr7_2:81237844-81237863 | Msa1081470:intron | 30.0% |
| CAACATGCTCAAGATTAATA+TGG | + | chr7_2:81238038-81238057 | None:intergenic | 30.0% | |
| CATATTAATCTTGAGCATGT+TGG | - | chr7_2:81238036-81238055 | Msa1081470:CDS | 30.0% | |
| GTTACAATTTGATATGCTTG+AGG | - | chr7_2:81238058-81238077 | Msa1081470:intron | 30.0% | |
| TTAGAGGATTCATCAAAATC+CGG | + | chr7_2:81238136-81238155 | None:intergenic | 30.0% | |
| !!! | CTATCCTAGTTTTGCTATTA+GGG | - | chr7_2:81238170-81238189 | Msa1081470:intron | 30.0% |
| GTGAATTGACGAATATTAAG+AGG | + | chr7_2:81238320-81238339 | None:intergenic | 30.0% | |
| TACAAGTAACAAAAATGCTC+AGG | + | chr7_2:81238351-81238370 | None:intergenic | 30.0% | |
| AATTTCACGATTAGAATCGT+AGG | + | chr7_2:81238522-81238541 | None:intergenic | 30.0% | |
| ATTAGATTTCTCCAATATGC+AGG | - | chr7_2:81238684-81238703 | Msa1081470:CDS | 30.0% | |
| TTCGTGTATGAAAAGATAGA+TGG | + | chr7_2:81238738-81238757 | None:intergenic | 30.0% | |
| !!! | CTGGTTTTGTTTTTACAAGT+AGG | - | chr7_2:81238887-81238906 | Msa1081470:five_prime_UTR | 30.0% |
| !!! | TGTTTTTTGTTACCTGGATC+TGG | + | chr7_2:81235654-81235673 | None:intergenic | 35.0% |
| GGGATAAAAGCAGTGTAAAA+TGG | + | chr7_2:81235837-81235856 | None:intergenic | 35.0% | |
| ! | ATGGCGTTTTGTGATTATCT+AGG | - | chr7_2:81235986-81236005 | Msa1081470:intron | 35.0% |
| ! | TGGCGTTTTGTGATTATCTA+GGG | - | chr7_2:81235987-81236006 | Msa1081470:intron | 35.0% |
| ! | TTTTGTCACACTAAAGGATG+TGG | - | chr7_2:81236126-81236145 | Msa1081470:intron | 35.0% |
| AGATGAGCAAGAAAATGCTT+TGG | - | chr7_2:81236201-81236220 | Msa1081470:intron | 35.0% | |
| GTATTAAGTGTGTGAGAAGA+AGG | + | chr7_2:81236238-81236257 | None:intergenic | 35.0% | |
| TTAAAGCTGCTTGCTTATAG+TGG | - | chr7_2:81236504-81236523 | Msa1081470:intron | 35.0% | |
| TAAAGCTGCTTGCTTATAGT+GGG | - | chr7_2:81236505-81236524 | Msa1081470:intron | 35.0% | |
| ! | ATATATGTTTTCCCTTGGAC+TGG | - | chr7_2:81236789-81236808 | Msa1081470:CDS | 35.0% |
| CTTGAATTTGAGTATGAGTC+AGG | + | chr7_2:81236844-81236863 | None:intergenic | 35.0% | |
| CTGACTCATACTCAAATTCA+AGG | - | chr7_2:81236842-81236861 | Msa1081470:CDS | 35.0% | |
| GGTGCCTATATTACTTACTT+TGG | - | chr7_2:81236863-81236882 | Msa1081470:CDS | 35.0% | |
| ! | TGTTAGTGGAATCCTACTTT+TGG | - | chr7_2:81236952-81236971 | Msa1081470:intron | 35.0% |
| ! | TTTTGCAATAGGCCAAAAGT+AGG | + | chr7_2:81236967-81236986 | None:intergenic | 35.0% |
| AGTTTGATTGATGTTGTTGC+TGG | - | chr7_2:81237044-81237063 | Msa1081470:intron | 35.0% | |
| TGAATACATAGACAGTTTCG+TGG | - | chr7_2:81237112-81237131 | Msa1081470:CDS | 35.0% | |
| ! | TGGTTGCAGTTACAACTTTT+TGG | - | chr7_2:81237313-81237332 | Msa1081470:CDS | 35.0% |
| ! | GGTTGCAGTTACAACTTTTT+GGG | - | chr7_2:81237314-81237333 | Msa1081470:CDS | 35.0% |
| TGAAACTCAAAACTTGGAGT+TGG | + | chr7_2:81237387-81237406 | None:intergenic | 35.0% | |
| GTAGAGTCATAGACAAAAAG+AGG | - | chr7_2:81237588-81237607 | Msa1081470:intron | 35.0% | |
| CATAGACAAAAAGAGGAGTT+TGG | - | chr7_2:81237595-81237614 | Msa1081470:intron | 35.0% | |
| ! | TCAGAATTTGAAGTCTGATC+TGG | + | chr7_2:81237875-81237894 | None:intergenic | 35.0% |
| AAGTGAAGACATCAAATGTC+TGG | - | chr7_2:81237987-81238006 | Msa1081470:CDS | 35.0% | |
| ! | AAGCAAGTGTTGTCAAATAG+CGG | - | chr7_2:81238090-81238109 | Msa1081470:intron | 35.0% |
| ! | AGCATTGTGGTTTTTGTTAG+AGG | + | chr7_2:81238152-81238171 | None:intergenic | 35.0% |
| !!! | GCTATCCTAGTTTTGCTATT+AGG | - | chr7_2:81238169-81238188 | Msa1081470:intron | 35.0% |
| ATTGCCCTAATAGCAAAACT+AGG | + | chr7_2:81238177-81238196 | None:intergenic | 35.0% | |
| AGCATTTGCAGAAACTTGAA+CGG | + | chr7_2:81238208-81238227 | None:intergenic | 35.0% | |
| ATTAAGAGGAGTGACTTGAT+AGG | + | chr7_2:81238306-81238325 | None:intergenic | 35.0% | |
| ! | TGAATGTTCTTCAGGTTTCT+GGG | - | chr7_2:81238394-81238413 | Msa1081470:CDS | 35.0% |
| TAAGACTGGAGAAAAGTCAA+AGG | - | chr7_2:81238641-81238660 | Msa1081470:CDS | 35.0% | |
| ATGAAAAGATAGATGGCACT+AGG | + | chr7_2:81238731-81238750 | None:intergenic | 35.0% | |
| GAGGTAAATATGCAAATCAC+AGG | + | chr7_2:81238761-81238780 | None:intergenic | 35.0% | |
| GTAAAAACAAAACCAGCCTT+CGG | + | chr7_2:81238883-81238902 | None:intergenic | 35.0% | |
| AGATTGAAGAACATCTTCGA+TGG | + | chr7_2:81238924-81238943 | None:intergenic | 35.0% | |
| TGTTTATTGCTTAGTTCGTC+TGG | + | chr7_2:81238954-81238973 | None:intergenic | 35.0% | |
| ATAAACAAGTAGCCTTCGAT+AGG | - | chr7_2:81238967-81238986 | Msa1081470:five_prime_UTR | 35.0% | |
| ATTAGTCCAATTCCTATCGA+AGG | + | chr7_2:81238982-81239001 | None:intergenic | 35.0% | |
| GAAAATTCATCACTGTGCCA+AGG | - | chr7_2:81235502-81235521 | Msa1081470:CDS | 40.0% | |
| TTCTTGGTGGAATTCTCTTC+TGG | - | chr7_2:81235530-81235549 | Msa1081470:CDS | 40.0% | |
| TGAACATAGTGAGTGACGAA+AGG | + | chr7_2:81235610-81235629 | None:intergenic | 40.0% | |
| GTCACTCACTATGTTCAATC+CGG | - | chr7_2:81235613-81235632 | Msa1081470:CDS | 40.0% | |
| ! | TTTTTGTTACCTGGATCTGG+AGG | + | chr7_2:81235651-81235670 | None:intergenic | 40.0% |
| !!! | GTGCTCTGTTTTTTGTTACC+TGG | + | chr7_2:81235660-81235679 | None:intergenic | 40.0% |
| ! | TTTGGGTTATGCAGAGTTAC+AGG | - | chr7_2:81235760-81235779 | Msa1081470:CDS | 40.0% |
| TTGGGTTATGCAGAGTTACA+GGG | - | chr7_2:81235761-81235780 | Msa1081470:CDS | 40.0% | |
| ! | AATTTGGCTTCTGTGTAGAG+TGG | - | chr7_2:81235929-81235948 | Msa1081470:intron | 40.0% |
| ! | TATCTGAAATGCCTAGGCTT+AGG | + | chr7_2:81236427-81236446 | None:intergenic | 40.0% |
| AAAGCTGCTTGCTTATAGTG+GGG | - | chr7_2:81236506-81236525 | Msa1081470:intron | 40.0% | |
| ! | ATTTTCTGGGCCAACTAAGA+AGG | - | chr7_2:81236629-81236648 | Msa1081470:intron | 40.0% |
| CTGATAAACATCCAGTCCAA+GGG | + | chr7_2:81236803-81236822 | None:intergenic | 40.0% | |
| !! | TTTGTGGCTCTTGTTGGTTT+AGG | - | chr7_2:81236905-81236924 | Msa1081470:intron | 40.0% |
| ! | GTTGTTGCTGGCCTATTTAT+TGG | - | chr7_2:81237056-81237075 | Msa1081470:intron | 40.0% |
| GGATTCCGAGTCCAATAAAT+AGG | + | chr7_2:81237070-81237089 | None:intergenic | 40.0% | |
| TTTATTGGACTCGGAATCCT+TGG | - | chr7_2:81237071-81237090 | Msa1081470:CDS | 40.0% | |
| TTGGATAAGCAAAGAGCAGT+AGG | + | chr7_2:81237353-81237372 | None:intergenic | 40.0% | |
| AAACTTGGAGTTGGAAGTTC+AGG | + | chr7_2:81237378-81237397 | None:intergenic | 40.0% | |
| GCAGTGTGAAACTCAAAACT+TGG | + | chr7_2:81237393-81237412 | None:intergenic | 40.0% | |
| GAGTTTCACACTGCTTTCAA+TGG | - | chr7_2:81237399-81237418 | Msa1081470:intron | 40.0% | |
| !! | TGCTTTCAATGGTGTTGCAT+TGG | - | chr7_2:81237410-81237429 | Msa1081470:intron | 40.0% |
| !! | GCTTTCAATGGTGTTGCATT+GGG | - | chr7_2:81237411-81237430 | Msa1081470:intron | 40.0% |
| !! | ATAACGGCTTTATTCCGTGA+AGG | - | chr7_2:81237652-81237671 | Msa1081470:intron | 40.0% |
| TCGTCAAATAATGGCTGTAG+TGG | - | chr7_2:81237728-81237747 | Msa1081470:intron | 40.0% | |
| TAAAGCAGTGTTGTCGATCT+CGG | + | chr7_2:81237806-81237825 | None:intergenic | 40.0% | |
| !! | GTTTTGAACAGTGACGTTTG+AGG | - | chr7_2:81237926-81237945 | Msa1081470:intron | 40.0% |
| GCTATAGTGCTATAGCATAC+CGG | - | chr7_2:81238114-81238133 | Msa1081470:intron | 40.0% | |
| GCAAAACTAGGATAGCATTG+TGG | + | chr7_2:81238165-81238184 | None:intergenic | 40.0% | |
| ATTTGCAGAAACTTGAACGG+CGG | + | chr7_2:81238205-81238224 | None:intergenic | 40.0% | |
| CAATAGCGTCTAGCTGAATT+AGG | - | chr7_2:81238249-81238268 | Msa1081470:CDS | 40.0% | |
| ! | GTGAATGTTCTTCAGGTTTC+TGG | - | chr7_2:81238393-81238412 | Msa1081470:CDS | 40.0% |
| ! | GAATGTTCTTCAGGTTTCTG+GGG | - | chr7_2:81238395-81238414 | Msa1081470:CDS | 40.0% |
| !! | AGTTCTGAAGAGAACAAACG+AGG | + | chr7_2:81238459-81238478 | None:intergenic | 40.0% |
| ACTGACAGTGCTTGTATTCA+TGG | - | chr7_2:81238476-81238495 | Msa1081470:intron | 40.0% | |
| CTGACAGTGCTTGTATTCAT+GGG | - | chr7_2:81238477-81238496 | Msa1081470:intron | 40.0% | |
| ATTCATGGGAAGAATGCTCT+TGG | - | chr7_2:81238491-81238510 | Msa1081470:intron | 40.0% | |
| TTCATGGGAAGAATGCTCTT+GGG | - | chr7_2:81238492-81238511 | Msa1081470:intron | 40.0% | |
| GCAGTAAGACTCTTGCAAAA+TGG | - | chr7_2:81238544-81238563 | Msa1081470:intron | 40.0% | |
| TGCAAAATGGATAATTCCCG+TGG | - | chr7_2:81238557-81238576 | Msa1081470:CDS | 40.0% | |
| ATTCAATGTGGGGATATAGG+TGG | + | chr7_2:81238616-81238635 | None:intergenic | 40.0% | |
| ACCTATATCCCCACATTGAA+TGG | - | chr7_2:81238615-81238634 | Msa1081470:CDS | 40.0% | |
| CCTATATCCCCACATTGAAT+GGG | - | chr7_2:81238616-81238635 | Msa1081470:CDS | 40.0% | |
| CTATATCCCCACATTGAATG+GGG | - | chr7_2:81238617-81238636 | Msa1081470:CDS | 40.0% | |
| CGTCGAGATGAAATTTCACT+GGG | + | chr7_2:81238852-81238871 | None:intergenic | 40.0% | |
| TCGTCGAGATGAAATTTCAC+TGG | + | chr7_2:81238853-81238872 | None:intergenic | 40.0% | |
| AAGTAGCCTTCGATAGGAAT+TGG | - | chr7_2:81238973-81238992 | Msa1081470:five_prime_UTR | 40.0% | |
| !! | GAAATAGTAAGCTGGCTTGC+TGG | + | chr7_2:81235376-81235395 | None:intergenic | 45.0% |
| GAAGCTTGAGAGTGAGATTG+AGG | + | chr7_2:81235573-81235592 | None:intergenic | 45.0% | |
| GTAGAGTGGTCATGGTCAAT+TGG | - | chr7_2:81235943-81235962 | Msa1081470:intron | 45.0% | |
| TAGGCAGATGACGTTGTTGA+TGG | - | chr7_2:81235967-81235986 | Msa1081470:intron | 45.0% | |
| ! | CTTATAGTGGGGTTGCTGTT+GGG | - | chr7_2:81236517-81236536 | Msa1081470:intron | 45.0% |
| GCTGATAAACATCCAGTCCA+AGG | + | chr7_2:81236804-81236823 | None:intergenic | 45.0% | |
| GAGTCAGGACATAGTGCAAA+AGG | + | chr7_2:81236829-81236848 | None:intergenic | 45.0% | |
| TTCCCTTGCTTGCTTGTTTG+TGG | - | chr7_2:81236889-81236908 | Msa1081470:intron | 45.0% | |
| AGCCACAAACAAGCAAGCAA+GGG | + | chr7_2:81236894-81236913 | None:intergenic | 45.0% | |
| TGCTTGTTTGTGGCTCTTGT+TGG | - | chr7_2:81236899-81236918 | Msa1081470:intron | 45.0% | |
| !! | TGGCTCTTGTTGGTTTAGGT+AGG | - | chr7_2:81236909-81236928 | Msa1081470:intron | 45.0% |
| ! | GCTGGCCTATTTATTGGACT+CGG | - | chr7_2:81237062-81237081 | Msa1081470:intron | 45.0% |
| CAACTGTAAGCCAAAGTCCA+AGG | + | chr7_2:81237091-81237110 | None:intergenic | 45.0% | |
| ATAGACAGTTTCGTGGTCTC+AGG | - | chr7_2:81237119-81237138 | Msa1081470:CDS | 45.0% | |
| TAGACAGTTTCGTGGTCTCA+GGG | - | chr7_2:81237120-81237139 | Msa1081470:CDS | 45.0% | |
| TTCGTGGTCTCAGGGAAAAA+CGG | - | chr7_2:81237128-81237147 | Msa1081470:CDS | 45.0% | |
| CCCATTCAATGTGGGGATAT+AGG | + | chr7_2:81238619-81238638 | None:intergenic | 45.0% | |
| TCTTAGCCCCATTCAATGTG+GGG | + | chr7_2:81238626-81238645 | None:intergenic | 45.0% | |
| GTCTTAGCCCCATTCAATGT+GGG | + | chr7_2:81238627-81238646 | None:intergenic | 45.0% | |
| AGTCTTAGCCCCATTCAATG+TGG | + | chr7_2:81238628-81238647 | None:intergenic | 45.0% | |
| ACATTGAATGGGGCTAAGAC+TGG | - | chr7_2:81238627-81238646 | Msa1081470:CDS | 45.0% | |
| AAGGCTTTCGACGTTGATAC+CGG | - | chr7_2:81238660-81238679 | Msa1081470:CDS | 45.0% | |
| TCCAATATGCAGGTCTTGCA+TGG | - | chr7_2:81238694-81238713 | Msa1081470:CDS | 45.0% | |
| ACCATGCAAGACCTGCATAT+TGG | + | chr7_2:81238698-81238717 | None:intergenic | 45.0% | |
| CGAGATGAAATTTCACTGGG+TGG | + | chr7_2:81238849-81238868 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTGAATTTT+TGG | - | chr7_2:81235742-81235761 | Msa1081470:CDS | 5.0% |
| !!! | TTTTTTTTTTTTGAATTTTT+GGG | - | chr7_2:81235743-81235762 | Msa1081470:CDS | 5.0% |
| TTCCACCAAGAATCGCACCT+TGG | + | chr7_2:81235522-81235541 | None:intergenic | 50.0% | |
| CTGGATCTGGAGGAGAAATG+GGG | + | chr7_2:81235641-81235660 | None:intergenic | 50.0% | |
| CCTGGATCTGGAGGAGAAAT+GGG | + | chr7_2:81235642-81235661 | None:intergenic | 50.0% | |
| ACCTGGATCTGGAGGAGAAA+TGG | + | chr7_2:81235643-81235662 | None:intergenic | 50.0% | |
| GTTATGCAGAGTTACAGGGC+TGG | - | chr7_2:81235765-81235784 | Msa1081470:CDS | 50.0% | |
| GCTTCTGTGTAGAGTGGTCA+TGG | - | chr7_2:81235935-81235954 | Msa1081470:intron | 50.0% | |
| GTGGTCATGGTCAATTGGCT+AGG | - | chr7_2:81235948-81235967 | Msa1081470:intron | 50.0% | |
| GTAGCAGTTACTCTCCTCAC+TGG | + | chr7_2:81236178-81236197 | None:intergenic | 50.0% | |
| CTTTCCATGGACCTAAGCCT+AGG | - | chr7_2:81236413-81236432 | Msa1081470:intron | 50.0% | |
| AATGCCTAGGCTTAGGTCCA+TGG | + | chr7_2:81236420-81236439 | None:intergenic | 50.0% | |
| ! | GCTTATAGTGGGGTTGCTGT+TGG | - | chr7_2:81236516-81236535 | Msa1081470:intron | 50.0% |
| CTGGGCCAACTAAGAAGGAT+TGG | - | chr7_2:81236634-81236653 | Msa1081470:intron | 50.0% | |
| GAGCCACAAACAAGCAAGCA+AGG | + | chr7_2:81236895-81236914 | None:intergenic | 50.0% | |
| GACTCGGAATCCTTGGACTT+TGG | - | chr7_2:81237078-81237097 | Msa1081470:CDS | 50.0% | |
| GGAGTTGGAAGTTCAGGAGT+TGG | + | chr7_2:81237372-81237391 | None:intergenic | 50.0% | |
| CGTCTAGCTGAATTAGGCTC+AGG | - | chr7_2:81238255-81238274 | Msa1081470:intron | 50.0% | |
| CAGTGCTGTGGTGAAACTGA+TGG | + | chr7_2:81238434-81238453 | None:intergenic | 50.0% | |
| ACAAACGAGGAACAGTGCTG+TGG | + | chr7_2:81238446-81238465 | None:intergenic | 50.0% | |
| TCCCGTGGTAGCAAACACAT+TGG | - | chr7_2:81238572-81238591 | Msa1081470:CDS | 50.0% | |
| ! | CCCAATGTGTTTGCTACCAC+GGG | + | chr7_2:81238576-81238595 | None:intergenic | 50.0% |
| CCCGTGGTAGCAAACACATT+GGG | - | chr7_2:81238573-81238592 | Msa1081470:CDS | 50.0% | |
| ! | GCCCAATGTGTTTGCTACCA+CGG | + | chr7_2:81238577-81238596 | None:intergenic | 50.0% |
| TCTCGACGAGAATTCACCGA+AGG | - | chr7_2:81238864-81238883 | Msa1081470:five_prime_UTR | 50.0% | |
| !! | TAGTAAGCTGGCTTGCTGGC+TGG | + | chr7_2:81235372-81235391 | None:intergenic | 55.0% |
| CTGTGCCAAGGTGCGATTCT+TGG | - | chr7_2:81235514-81235533 | Msa1081470:CDS | 55.0% | |
| TGCCAAGGTGCGATTCTTGG+TGG | - | chr7_2:81235517-81235536 | Msa1081470:CDS | 55.0% | |
| CTGGAGGAGAAATGGGGTTC+CGG | + | chr7_2:81235635-81235654 | None:intergenic | 55.0% | |
| CCCATTTCTCCTCCAGATCC+AGG | - | chr7_2:81235639-81235658 | Msa1081470:CDS | 55.0% | |
| ACTGGTGGAGATGCAGGTCT+TGG | + | chr7_2:81236160-81236179 | None:intergenic | 55.0% | |
| GCAGTTACTCTCCTCACTGG+TGG | + | chr7_2:81236175-81236194 | None:intergenic | 55.0% | |
| TGCAGGTCTTGCATGGTCTG+TGG | - | chr7_2:81238701-81238720 | Msa1081470:exon | 55.0% | |
| GACGAGAATTCACCGAAGGC+TGG | - | chr7_2:81238868-81238887 | Msa1081470:five_prime_UTR | 55.0% | |
| GACCTGCATCTCCACCAGTG+AGG | - | chr7_2:81236161-81236180 | Msa1081470:intron | 60.0% | |
| CTCCTCACTGGTGGAGATGC+AGG | + | chr7_2:81236166-81236185 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 81235209 | 81239008 | 81235209 | ID=Msa1081470;Name=Msa1081470 |
| chr7_2 | mRNA | 81235209 | 81239008 | 81235209 | ID=Msa1081470-mRNA-1;Parent=Msa1081470;Name=Msa1081470-mRNA-1;_AED=0.31;_eAED=0.31;_QI=290|1|1|1|1|1|8|244|389 |
| chr7_2 | exon | 81235209 | 81235809 | 81235209 | ID=Msa1081470-mRNA-1:exon:20809;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81236780 | 81236895 | 81236780 | ID=Msa1081470-mRNA-1:exon:20808;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81237068 | 81237196 | 81237068 | ID=Msa1081470-mRNA-1:exon:20807;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81237291 | 81237394 | 81237291 | ID=Msa1081470-mRNA-1:exon:20806;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81237945 | 81238075 | 81237945 | ID=Msa1081470-mRNA-1:exon:20805;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81238196 | 81238270 | 81238196 | ID=Msa1081470-mRNA-1:exon:20804;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81238348 | 81238443 | 81238348 | ID=Msa1081470-mRNA-1:exon:20803;Parent=Msa1081470-mRNA-1 |
| chr7_2 | exon | 81238557 | 81239008 | 81238557 | ID=Msa1081470-mRNA-1:exon:20802;Parent=Msa1081470-mRNA-1 |
| chr7_2 | five_prime_UTR | 81238719 | 81239008 | 81238719 | ID=Msa1081470-mRNA-1:five_prime_utr;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81238557 | 81238718 | 81238557 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81238348 | 81238443 | 81238348 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81238196 | 81238270 | 81238196 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81237945 | 81238075 | 81237945 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81237291 | 81237394 | 81237291 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81237068 | 81237196 | 81237068 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81236780 | 81236895 | 81236780 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | CDS | 81235453 | 81235809 | 81235453 | ID=Msa1081470-mRNA-1:cds;Parent=Msa1081470-mRNA-1 |
| chr7_2 | three_prime_UTR | 81235209 | 81235452 | 81235209 | ID=Msa1081470-mRNA-1:three_prime_utr;Parent=Msa1081470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
