Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041410 | XP_013450297.1 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041410 | sp|Q9M2G7|LPPD_ARATH | 65.196 | 408 | 123 | 1 | 1 | 389 | 9 | 416 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041410 | G8A197 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017590 | Msa1041410 | 0.836114 | 1.130889e-56 | -8.615850e-47 |
| Msa0079730 | Msa1041410 | 0.842893 | 1.957949e-58 | -8.615850e-47 |
| Msa0714170 | Msa1041410 | -0.804104 | 2.535270e-49 | -8.615850e-47 |
| Msa0835520 | Msa1041410 | -0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0127580 | Msa1041410 | 0.839681 | 1.369878e-57 | -8.615850e-47 |
| Msa0166570 | Msa1041410 | -0.807108 | 5.938047e-50 | -8.615850e-47 |
| Msa0172180 | Msa1041410 | 0.839155 | 1.876714e-57 | -8.615850e-47 |
| Msa0377970 | Msa1041410 | 0.826540 | 2.565030e-54 | -8.615850e-47 |
| Msa0418430 | Msa1041410 | -0.808392 | 3.167982e-50 | -8.615850e-47 |
| Msa0427620 | Msa1041410 | 0.822539 | 2.244493e-53 | -8.615850e-47 |
| Msa0465800 | Msa1041410 | -0.819211 | 1.308112e-52 | -8.615850e-47 |
| Msa0472740 | Msa1041410 | -0.824564 | 7.539001e-54 | -8.615850e-47 |
| Msa0481490 | Msa1041410 | -0.822688 | 2.071630e-53 | -8.615850e-47 |
| Msa1031150 | Msa1041410 | -0.819970 | 8.780979e-53 | -8.615850e-47 |
| Msa1041410 | Msa1070250 | -0.817468 | 3.247136e-52 | -8.615850e-47 |
| Msa1041410 | Msa1081470 | 0.928722 | 1.930014e-92 | -8.615850e-47 |
| Msa1041410 | Msa1089100 | 0.822330 | 2.510078e-53 | -8.615850e-47 |
| Msa1041410 | Msa1098180 | 0.823490 | 1.347128e-53 | -8.615850e-47 |
| Msa1041410 | Msa1119570 | -0.819393 | 1.188968e-52 | -8.615850e-47 |
| Msa1041410 | Msa1158090 | -0.803434 | 3.492519e-49 | -8.615850e-47 |
| Msa1041410 | Msa1166600 | 0.999081 | 3.133579e-289 | -8.615850e-47 |
| Msa1041410 | Msa1177240 | -0.804267 | 2.345354e-49 | -8.615850e-47 |
| Msa1041410 | Msa1281270 | -0.823623 | 1.253611e-53 | -8.615850e-47 |
| Msa1041410 | Msa1317030 | -0.815798 | 7.685575e-52 | -8.615850e-47 |
| Msa1041410 | Msa1320380 | -0.826617 | 2.459508e-54 | -8.615850e-47 |
| Msa1041410 | Msa1388240 | -0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa1041410 | Msa1402430 | 0.916700 | 1.299753e-85 | -8.615850e-47 |
| Msa1041410 | Msa1421870 | -0.801758 | 7.740059e-49 | -8.615850e-47 |
| Msa1041410 | Msa1423580 | 0.831046 | 2.083515e-55 | -8.615850e-47 |
| Msa0253160 | Msa1041410 | -0.806250 | 9.010823e-50 | -8.615850e-47 |
| Msa0291940 | Msa1041410 | -0.804313 | 2.293525e-49 | -8.615850e-47 |
| Msa0358290 | Msa1041410 | -0.807669 | 4.515899e-50 | -8.615850e-47 |
| Msa0518130 | Msa1041410 | 0.826224 | 3.050658e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041410 | MtrunA17_Chr7g0268351 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041410 | AT3G58490.1 | 65.196 | 408 | 123 | 1 | 1 | 389 | 9 | 416 | 0.0 | 566 |
| Msa1041410 | AT3G58490.2 | 66.562 | 317 | 87 | 1 | 92 | 389 | 30 | 346 | 1.71e-161 | 457 |
Find 112 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAATGTTCTTCAGGTTTC+TGG | 0.066140 | 7_1:+79030097 | Msa1041410:intron |
| CTTAATACAGTTTGCTTATC+TGG | 0.089322 | 7_1:+79027954 | Msa1041410:CDS |
| CAAGAAAATGCTTTGGAATA+TGG | 0.194037 | 7_1:+79027912 | Msa1041410:CDS |
| GTTGTTGCTGGCCTATTTAT+TGG | 0.246125 | 7_1:+79028760 | Msa1041410:CDS |
| TTTGGGTTATGCAGAGTTAC+AGG | 0.286499 | 7_1:+79027464 | Msa1041410:intron |
| TTCTTGGTGGAATTCTCTTC+TGG | 0.291249 | 7_1:+79027238 | Msa1041410:CDS |
| CCTGGATCTGGAGGAGAATT+GGG | 0.309427 | 7_1:-79027347 | None:intergenic |
| GACTCGGAATCCTTGGACTT+TGG | 0.316676 | 7_1:+79028782 | Msa1041410:CDS |
| ACCTGGATCTGGAGGAGAAT+TGG | 0.317722 | 7_1:-79027348 | None:intergenic |
| GGGATAAAAGCAGTGTAAAA+TGG | 0.320919 | 7_1:-79027538 | None:intergenic |
| TTCCCTTGCTTGCTTGTTTG+TGG | 0.322437 | 7_1:+79028593 | Msa1041410:CDS |
| GGATTCCGAGTCCAATAAAT+AGG | 0.341580 | 7_1:-79028771 | None:intergenic |
| CTGGAGGAGAATTGGGGTTC+CGG | 0.344682 | 7_1:-79027340 | None:intergenic |
| TGAATGTTCTTCAGGTTTCT+GGG | 0.347452 | 7_1:+79030098 | Msa1041410:intron |
| AAACTTGGAGTTGGAAGTTC+AGG | 0.348718 | 7_1:-79029079 | None:intergenic |
| AGTTTGATTGATGTTGTTGC+TGG | 0.357835 | 7_1:+79028748 | Msa1041410:CDS |
| TGCTTGTTTGTGGCTCTTGT+TGG | 0.362453 | 7_1:+79028603 | Msa1041410:CDS |
| ACCTATATCCCCACATTGAA+TGG | 0.364000 | 7_1:+79030319 | Msa1041410:CDS |
| TGTTTATTGCTTAGTTCGTC+TGG | 0.375962 | 7_1:-79030655 | None:intergenic |
| GCAGTAAGACTCTTGCAAAA+TGG | 0.377467 | 7_1:+79030248 | Msa1041410:CDS |
| ACTGACAGTGCTTGTATTCA+TGG | 0.384822 | 7_1:+79030180 | Msa1041410:CDS |
| TTTGTGGCTCTTGTTGGTTT+AGG | 0.391774 | 7_1:+79028609 | Msa1041410:CDS |
| ATAGACAGTTTCGTGGTCTC+AGG | 0.395623 | 7_1:+79028823 | Msa1041410:CDS |
| CCCATTCAATGTGGGGATAT+AGG | 0.396341 | 7_1:-79030320 | None:intergenic |
| AAGTAGCCTTCGATAGGAAT+TGG | 0.400587 | 7_1:+79030677 | Msa1041410:three_prime_UTR |
| GGTGCCTATATTACTTACTT+TGG | 0.410570 | 7_1:+79028567 | Msa1041410:CDS |
| ACCATGCAAGACCTGCATAT+TGG | 0.414363 | 7_1:-79030399 | None:intergenic |
| CCTATATCCCCACATTGAAT+GGG | 0.420666 | 7_1:+79030320 | Msa1041410:CDS |
| TTTGTAGGAAGAATTTATCT+TGG | 0.420992 | 7_1:+79028718 | Msa1041410:intron |
| ACTGGTGGAGATGCAGGTCT+TGG | 0.428353 | 7_1:-79027861 | None:intergenic |
| AACTCCAAAGTAAGTAATAT+AGG | 0.432966 | 7_1:-79028571 | None:intergenic |
| TTTATTGGACTCGGAATCCT+TGG | 0.433430 | 7_1:+79028775 | Msa1041410:CDS |
| CTGTGCCAAGGTGCGATTCT+TGG | 0.437065 | 7_1:+79027222 | Msa1041410:CDS |
| GAGTTTCACACTGCTTTCAA+TGG | 0.438556 | 7_1:+79029103 | Msa1041410:CDS |
| GCTTTCAATGGTGTTGCATT+GGG | 0.446391 | 7_1:+79029115 | Msa1041410:CDS |
| CTTGAATTTGAGTATGAGTC+AGG | 0.447504 | 7_1:-79028545 | None:intergenic |
| TCCAATATGCAGGTCTTGCA+TGG | 0.448223 | 7_1:+79030398 | Msa1041410:CDS |
| AGATGAGCAAGAAAATGCTT+TGG | 0.451289 | 7_1:+79027905 | Msa1041410:CDS |
| CTCCTCACTGGTGGAGATGC+AGG | 0.451870 | 7_1:-79027867 | None:intergenic |
| ACATTGAATGGGGCTAAGAC+TGG | 0.454763 | 7_1:+79030331 | Msa1041410:CDS |
| TTAATACAGTTTGCTTATCT+GGG | 0.458973 | 7_1:+79027955 | Msa1041410:CDS |
| CCCAATTCTCCTCCAGATCC+AGG | 0.459052 | 7_1:+79027347 | Msa1041410:CDS |
| TGCTTTCAATGGTGTTGCAT+TGG | 0.459262 | 7_1:+79029114 | Msa1041410:CDS |
| ATTCATGGGAAGAATGCTCT+TGG | 0.465240 | 7_1:+79030195 | Msa1041410:CDS |
| TCGTCGAGATGAAATTTCAC+TGG | 0.468374 | 7_1:-79030554 | None:intergenic |
| AAGGCTTTCGACGTTGATAC+CGG | 0.469002 | 7_1:+79030364 | Msa1041410:CDS |
| GACGAGAATTCACCGAAGGC+TGG | 0.469167 | 7_1:+79030572 | Msa1041410:three_prime_UTR |
| GTCTTAGCCCCATTCAATGT+GGG | 0.476496 | 7_1:-79030328 | None:intergenic |
| GAGCCACAAACAAGCAAGCA+AGG | 0.478723 | 7_1:-79028596 | None:intergenic |
| GAGTCAGGACATAGTGCAAA+AGG | 0.482369 | 7_1:-79028530 | None:intergenic |
| CTGACTCATACTCAAATTCA+AGG | 0.485216 | 7_1:+79028546 | Msa1041410:CDS |
| GTATTAAGTGTGTGAGAAGA+AGG | 0.494461 | 7_1:-79027939 | None:intergenic |
| ATTAGATTTCTCCAATATGC+AGG | 0.497088 | 7_1:+79030388 | Msa1041410:CDS |
| CCCGTGGTAGCAAACACATT+GGG | 0.500346 | 7_1:+79030277 | Msa1041410:CDS |
| GTCACTCACTATGTTCAATC+CGG | 0.503422 | 7_1:+79027321 | Msa1041410:CDS |
| CCCAATGTGTTTGCTACCAC+GGG | 0.503942 | 7_1:-79030277 | None:intergenic |
| GCTGGCCTATTTATTGGACT+CGG | 0.504462 | 7_1:+79028766 | Msa1041410:CDS |
| GTAGAGTGGTCATGGTCAAT+TGG | 0.504695 | 7_1:+79027647 | Msa1041410:intron |
| GTAGCAGTTACTCTCCTCAC+TGG | 0.505620 | 7_1:-79027879 | None:intergenic |
| ATACATACCCAGAATAACAT+AGG | 0.508465 | 7_1:-79027559 | None:intergenic |
| TTATCTAGGGAACTGTATAA+AGG | 0.513298 | 7_1:+79027704 | Msa1041410:CDS |
| GGAGTTGGAAGTTCAGGAGT+TGG | 0.515222 | 7_1:-79029073 | None:intergenic |
| GAAATAGTAAGCTGGCTGGC+TGG | 0.519695 | 7_1:-79027056 | None:intergenic |
| TTCGTGTATGAAAAGATAGA+TGG | 0.520058 | 7_1:-79030439 | None:intergenic |
| TGAAACTCAAAACTTGGAGT+TGG | 0.527338 | 7_1:-79029088 | None:intergenic |
| GCAGTGTGAAACTCAAAACT+TGG | 0.530399 | 7_1:-79029094 | None:intergenic |
| TTGAAACAGAAATAGTAAGC+TGG | 0.531325 | 7_1:-79027064 | None:intergenic |
| TTGGATAAGCAAAGAGCAGT+AGG | 0.537394 | 7_1:-79029054 | None:intergenic |
| GAAGTTTGAGAGTGAGATTG+AGG | 0.540461 | 7_1:-79027278 | None:intergenic |
| GCCCAATGTGTTTGCTACCA+CGG | 0.540876 | 7_1:-79030278 | None:intergenic |
| GCTTCTGTGTAGAGTGGTCA+TGG | 0.542830 | 7_1:+79027639 | Msa1041410:intron |
| TAGGCAGATGACGTTGTTGA+TGG | 0.550670 | 7_1:+79027671 | Msa1041410:CDS |
| GAGGTAAATATGCAAATCAC+AGG | 0.552763 | 7_1:-79030462 | None:intergenic |
| CGTCGAGATGAAATTTCACT+GGG | 0.553071 | 7_1:-79030553 | None:intergenic |
| TTCATGGGAAGAATGCTCTT+GGG | 0.553751 | 7_1:+79030196 | Msa1041410:CDS |
| TGCCAAGGTGCGATTCTTGG+TGG | 0.554208 | 7_1:+79027225 | Msa1041410:CDS |
| ATATTGGAGAAATCTAATTC+CGG | 0.556168 | 7_1:-79030383 | None:intergenic |
| TGAATACATAGACAGTTTCG+TGG | 0.564407 | 7_1:+79028816 | Msa1041410:CDS |
| AGCCACAAACAAGCAAGCAA+GGG | 0.567668 | 7_1:-79028595 | None:intergenic |
| GTGGTCATGGTCAATTGGCT+AGG | 0.568631 | 7_1:+79027652 | Msa1041410:CDS |
| TAGACAGTTTCGTGGTCTCA+GGG | 0.569578 | 7_1:+79028824 | Msa1041410:CDS |
| GAATGTTCTTCAGGTTTCTG+GGG | 0.580420 | 7_1:+79030099 | Msa1041410:intron |
| TTGGGTTATGCAGAGTTACA+GGG | 0.581088 | 7_1:+79027465 | Msa1041410:intron |
| AGATTGAAGAACATCTTCGA+TGG | 0.584691 | 7_1:-79030625 | None:intergenic |
| CTGGATCTGGAGGAGAATTG+GGG | 0.585063 | 7_1:-79027346 | None:intergenic |
| ATAAACAAGTAGCCTTCGAT+AGG | 0.585546 | 7_1:+79030671 | Msa1041410:three_prime_UTR |
| CTGACAGTGCTTGTATTCAT+GGG | 0.586833 | 7_1:+79030181 | Msa1041410:CDS |
| AATTTCACGATTAGAATCGT+AGG | 0.590889 | 7_1:-79030223 | None:intergenic |
| CAACTGTAAGCCAAAGTCCA+AGG | 0.591678 | 7_1:-79028792 | None:intergenic |
| ATTAGTCCAATTCCTATCGA+AGG | 0.596421 | 7_1:-79030683 | None:intergenic |
| AACAGAAATAGTAAGCTGGC+TGG | 0.600135 | 7_1:-79027060 | None:intergenic |
| GCAGTTACTCTCCTCACTGG+TGG | 0.601958 | 7_1:-79027876 | None:intergenic |
| TACATACCCAGAATAACATA+GGG | 0.604961 | 7_1:-79027558 | None:intergenic |
| TCCCGTGGTAGCAAACACAT+TGG | 0.609245 | 7_1:+79030276 | Msa1041410:CDS |
| ATGAAAAGATAGATGGCACT+AGG | 0.612679 | 7_1:-79030432 | None:intergenic |
| TGCAAAATGGATAATTCCCG+TGG | 0.613589 | 7_1:+79030261 | Msa1041410:CDS |
| AGTCTTAGCCCCATTCAATG+TGG | 0.617212 | 7_1:-79030329 | None:intergenic |
| GTTATGCAGAGTTACAGGGC+TGG | 0.618352 | 7_1:+79027469 | Msa1041410:intron |
| GAAAATTCATCACTGTGCCA+AGG | 0.630218 | 7_1:+79027210 | Msa1041410:CDS |
| TAAGACTGGAGAAAAGTCAA+AGG | 0.630797 | 7_1:+79030345 | Msa1041410:CDS |
| CGAGATGAAATTTCACTGGG+TGG | 0.632988 | 7_1:-79030550 | None:intergenic |
| TGAACATAGTGAGTGACGAA+AGG | 0.636744 | 7_1:-79027315 | None:intergenic |
| TTCCACCAAGAATCGCACCT+TGG | 0.638229 | 7_1:-79027227 | None:intergenic |
| CTATATCCCCACATTGAATG+GGG | 0.639865 | 7_1:+79030321 | Msa1041410:CDS |
| TGCAGGTCTTGCATGGTCTG+TGG | 0.652360 | 7_1:+79030405 | Msa1041410:CDS |
| TCTTAGCCCCATTCAATGTG+GGG | 0.667373 | 7_1:-79030327 | None:intergenic |
| CAGTGCTGTGGTGAAACTGA+TGG | 0.676045 | 7_1:-79030135 | None:intergenic |
| TCTCGACGAGAATTCACCGA+AGG | 0.677592 | 7_1:+79030568 | Msa1041410:three_prime_UTR |
| ATTCAATGTGGGGATATAGG+TGG | 0.679967 | 7_1:-79030317 | None:intergenic |
| ACAAACGAGGAACAGTGCTG+TGG | 0.694315 | 7_1:-79030147 | None:intergenic |
| GACCTGCATCTCCACCAGTG+AGG | 0.716851 | 7_1:+79027865 | Msa1041410:CDS |
| AGTTCTGAAGAGAACAAACG+AGG | 0.763056 | 7_1:-79030160 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAGAGAATAAAATTAT+GGG | - | chr7_1:79027391-79027410 | None:intergenic | 10.0% |
| !!! | TTTTTAAGAGAATAAAATTA+TGG | - | chr7_1:79027392-79027411 | None:intergenic | 10.0% |
| !!! | ATTTTTGTTTTTTGAATTTT+TGG | + | chr7_1:79027446-79027465 | Msa1041410:intron | 10.0% |
| !!! | TTTTTGTTTTTTGAATTTTT+GGG | + | chr7_1:79027447-79027466 | Msa1041410:intron | 10.0% |
| !! | AAATTAAATAAGTAAAAACA+TGG | + | chr7_1:79028363-79028382 | Msa1041410:intron | 10.0% |
| !! | ACAAAAATTAAATAAAATAG+AGG | - | chr7_1:79030484-79030503 | None:intergenic | 10.0% |
| !! | TTTAAGAGAATAAAATTATG+GGG | - | chr7_1:79027390-79027409 | None:intergenic | 15.0% |
| !! | TTAAAAAACTGTGAATTTAT+TGG | + | chr7_1:79027610-79027629 | Msa1041410:intron | 15.0% |
| !!! | ATATTTCTTATCTATTTTCT+GGG | + | chr7_1:79028320-79028339 | Msa1041410:intron | 15.0% |
| !!! | TTTATTTAATTTTTGTACAG+AGG | + | chr7_1:79030488-79030507 | Msa1041410:three_prime_UTR | 15.0% |
| !!! | TTATTTAATTTTTGTACAGA+GGG | + | chr7_1:79030489-79030508 | Msa1041410:three_prime_UTR | 15.0% |
| !!! | TTTTTAGAATACTAAGAAAG+TGG | + | chr7_1:79026978-79026997 | Msa1041410:five_prime_UTR | 20.0% |
| !! | GATAATAACAAGAACAAAAA+TGG | + | chr7_1:79027188-79027207 | Msa1041410:exon | 20.0% |
| !!! | TTTTAATTGAAAACTTTCCA+TGG | + | chr7_1:79028104-79028123 | Msa1041410:intron | 20.0% |
| !!! | CATATTTCTTATCTATTTTC+TGG | + | chr7_1:79028319-79028338 | Msa1041410:intron | 20.0% |
| !! | AATCAATTTAAACTGATGAT+CGG | - | chr7_1:79028422-79028441 | None:intergenic | 20.0% |
| !! | ATAAGATAAGTTAGAATACA+AGG | - | chr7_1:79028991-79029010 | None:intergenic | 20.0% |
| !! | ATATAATCTCGTAATTGTAT+AGG | + | chr7_1:79029223-79029242 | Msa1041410:intron | 20.0% |
| !! | TATAATCTCGTAATTGTATA+GGG | + | chr7_1:79029224-79029243 | Msa1041410:intron | 20.0% |
| !!! | TATTTAATTTTTGTACAGAG+GGG | + | chr7_1:79030490-79030509 | Msa1041410:three_prime_UTR | 20.0% |
| !!! | TATCTTGATGCTATTTTTTC+TGG | + | chr7_1:79027493-79027512 | Msa1041410:CDS | 25.0% |
| !!! | ATCTTGATGCTATTTTTTCT+GGG | + | chr7_1:79027494-79027513 | Msa1041410:CDS | 25.0% |
| !! | TTTTATCCCTATGTTATTCT+GGG | + | chr7_1:79027552-79027571 | Msa1041410:CDS | 25.0% |
| ! | ACTGTGAATTTATTGGAATT+TGG | + | chr7_1:79027617-79027636 | Msa1041410:intron | 25.0% |
| ! | GTTGTTGTATTTGATGTTTA+TGG | + | chr7_1:79027790-79027809 | Msa1041410:intron | 25.0% |
| !! | TTAATACAGTTTGCTTATCT+GGG | + | chr7_1:79027955-79027974 | Msa1041410:CDS | 25.0% |
| !! | CATTTTTATGCATGTGAAAT+TGG | + | chr7_1:79027983-79028002 | Msa1041410:intron | 25.0% |
| ! | TTAACTCTTTAGACATCTAT+AGG | + | chr7_1:79028041-79028060 | Msa1041410:intron | 25.0% |
| ! | ATCATGTAACTTGAATTGTA+AGG | - | chr7_1:79028292-79028311 | None:intergenic | 25.0% |
| !! | CATTAATATATGTTTTCCCT+TGG | + | chr7_1:79028488-79028507 | Msa1041410:intron | 25.0% |
| ! | AACTCCAAAGTAAGTAATAT+AGG | - | chr7_1:79028574-79028593 | None:intergenic | 25.0% |
| ! | TATTACTTCTAATCTGTTAG+TGG | + | chr7_1:79028642-79028661 | Msa1041410:intron | 25.0% |
| !!! | AATTGTTTGTTACCTTTTGT+AGG | + | chr7_1:79028703-79028722 | Msa1041410:intron | 25.0% |
| ! | AGATAAATTCTTCCTACAAA+AGG | - | chr7_1:79028718-79028737 | None:intergenic | 25.0% |
| ! | TTTGTAGGAAGAATTTATCT+TGG | + | chr7_1:79028718-79028737 | Msa1041410:intron | 25.0% |
| !! | CTAACTTATCTTATGTGTTT+TGG | + | chr7_1:79028997-79029016 | Msa1041410:intron | 25.0% |
| ! | TTGCTAAATAGCACTTATAA+CGG | + | chr7_1:79029340-79029359 | Msa1041410:intron | 25.0% |
| ! | TACAAAATGTCGTCAAATAA+TGG | + | chr7_1:79029423-79029442 | Msa1041410:intron | 25.0% |
| ! | TTCAAATTCTGAATGTTTCT+AGG | + | chr7_1:79029587-79029606 | Msa1041410:intron | 25.0% |
| !! | TCAAATTCTGAATGTTTCTA+GGG | + | chr7_1:79029588-79029607 | Msa1041410:intron | 25.0% |
| ! | TAACATGCTCAAGATTAATA+TGG | - | chr7_1:79029742-79029761 | None:intergenic | 25.0% |
| ! | TTTAATTGTGAATGTTCTTC+AGG | + | chr7_1:79030090-79030109 | Msa1041410:intron | 25.0% |
| !!! | TATAGGTGGTTGATTTTATT+GGG | - | chr7_1:79030306-79030325 | None:intergenic | 25.0% |
| !!! | ATATAGGTGGTTGATTTTAT+TGG | - | chr7_1:79030307-79030326 | None:intergenic | 25.0% |
| ! | ATATTGGAGAAATCTAATTC+CGG | - | chr7_1:79030386-79030405 | None:intergenic | 25.0% |
| TTGAAACAGAAATAGTAAGC+TGG | - | chr7_1:79027067-79027086 | None:intergenic | 30.0% | |
| ! | CTTTTATCCCTATGTTATTC+TGG | + | chr7_1:79027551-79027570 | Msa1041410:CDS | 30.0% |
| TACATACCCAGAATAACATA+GGG | - | chr7_1:79027561-79027580 | None:intergenic | 30.0% | |
| ATACATACCCAGAATAACAT+AGG | - | chr7_1:79027562-79027581 | None:intergenic | 30.0% | |
| TTATCTAGGGAACTGTATAA+AGG | + | chr7_1:79027704-79027723 | Msa1041410:CDS | 30.0% | |
| ATTTGATGTTTATGGACTCA+AGG | + | chr7_1:79027798-79027817 | Msa1041410:intron | 30.0% | |
| !!! | TTGTTGTTTTGTCACACTAA+AGG | + | chr7_1:79027824-79027843 | Msa1041410:intron | 30.0% |
| !! | CAAGAAAATGCTTTGGAATA+TGG | + | chr7_1:79027912-79027931 | Msa1041410:CDS | 30.0% |
| ! | CTTAATACAGTTTGCTTATC+TGG | + | chr7_1:79027954-79027973 | Msa1041410:CDS | 30.0% |
| ! | AGTTTTCCGTAAGTGAATAA+CGG | + | chr7_1:79028073-79028092 | Msa1041410:intron | 30.0% |
| AATTTGCCGTTATTCACTTA+CGG | - | chr7_1:79028082-79028101 | None:intergenic | 30.0% | |
| ! | AACAAATATCTGAAATGCCT+AGG | - | chr7_1:79028137-79028156 | None:intergenic | 30.0% |
| ! | TTTTTCCAATCCTTCTTAGT+TGG | - | chr7_1:79028346-79028365 | None:intergenic | 30.0% |
| ! | TCATTGTTCTGTTTTGCAAT+AGG | - | chr7_1:79028682-79028701 | None:intergenic | 30.0% |
| GTGCTGAAATATTCATTTAG+AGG | - | chr7_1:79028862-79028881 | None:intergenic | 30.0% | |
| CACTTCGATAACATTAAAAG+AGG | - | chr7_1:79029158-79029177 | None:intergenic | 30.0% | |
| ATAGACAAAAAGAGGAGTTT+GGG | + | chr7_1:79029300-79029319 | Msa1041410:intron | 30.0% | |
| ! | AATTTGTTCAGATTCCTTCA+CGG | - | chr7_1:79029373-79029392 | None:intergenic | 30.0% |
| ! | GCTCTAGATTACTTAAGTAT+TGG | + | chr7_1:79029548-79029567 | Msa1041410:intron | 30.0% |
| GTTACAATTTGATATGCTTG+AGG | + | chr7_1:79029762-79029781 | Msa1041410:intron | 30.0% | |
| TTAGAGGATTCATCAAAATC+CGG | - | chr7_1:79029840-79029859 | None:intergenic | 30.0% | |
| !!! | CTATCCTAGTTTTGCTATTA+GGG | + | chr7_1:79029874-79029893 | Msa1041410:intron | 30.0% |
| GTGAATTGACGAATATTAAG+AGG | - | chr7_1:79030024-79030043 | None:intergenic | 30.0% | |
| AATTTCACGATTAGAATCGT+AGG | - | chr7_1:79030226-79030245 | None:intergenic | 30.0% | |
| ATTAGATTTCTCCAATATGC+AGG | + | chr7_1:79030388-79030407 | Msa1041410:CDS | 30.0% | |
| TTCGTGTATGAAAAGATAGA+TGG | - | chr7_1:79030442-79030461 | None:intergenic | 30.0% | |
| !!! | CTGGTTTTGTTTTTACAAGT+AGG | + | chr7_1:79030591-79030610 | Msa1041410:three_prime_UTR | 30.0% |
| !!! | TGTTTTTTGTTACCTGGATC+TGG | - | chr7_1:79027362-79027381 | None:intergenic | 35.0% |
| GGGATAAAAGCAGTGTAAAA+TGG | - | chr7_1:79027541-79027560 | None:intergenic | 35.0% | |
| ! | ATGGCGTTTTGTGATTATCT+AGG | + | chr7_1:79027690-79027709 | Msa1041410:CDS | 35.0% |
| ! | TGGCGTTTTGTGATTATCTA+GGG | + | chr7_1:79027691-79027710 | Msa1041410:CDS | 35.0% |
| ! | TTTTGTCACACTAAAGGATG+TGG | + | chr7_1:79027830-79027849 | Msa1041410:intron | 35.0% |
| AGATGAGCAAGAAAATGCTT+TGG | + | chr7_1:79027905-79027924 | Msa1041410:CDS | 35.0% | |
| GTATTAAGTGTGTGAGAAGA+AGG | - | chr7_1:79027942-79027961 | None:intergenic | 35.0% | |
| TTAAAGCTGCTTGCTTATAG+TGG | + | chr7_1:79028208-79028227 | Msa1041410:intron | 35.0% | |
| TAAAGCTGCTTGCTTATAGT+GGG | + | chr7_1:79028209-79028228 | Msa1041410:intron | 35.0% | |
| CTCTGACCAAATGATTGATT+AGG | + | chr7_1:79028258-79028277 | Msa1041410:intron | 35.0% | |
| TGCACACCTAATCAATCATT+TGG | - | chr7_1:79028267-79028286 | None:intergenic | 35.0% | |
| ! | ATATATGTTTTCCCTTGGAC+TGG | + | chr7_1:79028493-79028512 | Msa1041410:intron | 35.0% |
| CTTGAATTTGAGTATGAGTC+AGG | - | chr7_1:79028548-79028567 | None:intergenic | 35.0% | |
| CTGACTCATACTCAAATTCA+AGG | + | chr7_1:79028546-79028565 | Msa1041410:CDS | 35.0% | |
| GGTGCCTATATTACTTACTT+TGG | + | chr7_1:79028567-79028586 | Msa1041410:CDS | 35.0% | |
| ! | TGTTAGTGGAATCCTACTTT+TGG | + | chr7_1:79028656-79028675 | Msa1041410:intron | 35.0% |
| ! | TTTTGCAATAGGCCAAAAGT+AGG | - | chr7_1:79028671-79028690 | None:intergenic | 35.0% |
| AGTTTGATTGATGTTGTTGC+TGG | + | chr7_1:79028748-79028767 | Msa1041410:CDS | 35.0% | |
| TGAATACATAGACAGTTTCG+TGG | + | chr7_1:79028816-79028835 | Msa1041410:CDS | 35.0% | |
| ! | TGGTTGCAGTTACAACTTTT+TGG | + | chr7_1:79029017-79029036 | Msa1041410:intron | 35.0% |
| ! | GGTTGCAGTTACAACTTTTT+GGG | + | chr7_1:79029018-79029037 | Msa1041410:intron | 35.0% |
| TGAAACTCAAAACTTGGAGT+TGG | - | chr7_1:79029091-79029110 | None:intergenic | 35.0% | |
| GTAGAGTCATAGACAAAAAG+AGG | + | chr7_1:79029292-79029311 | Msa1041410:intron | 35.0% | |
| CATAGACAAAAAGAGGAGTT+TGG | + | chr7_1:79029299-79029318 | Msa1041410:intron | 35.0% | |
| ! | TCAGAATTTGAAGTCTGATC+TGG | - | chr7_1:79029579-79029598 | None:intergenic | 35.0% |
| AAGTGAAGACATCAAATGTC+TGG | + | chr7_1:79029691-79029710 | Msa1041410:intron | 35.0% | |
| ! | AAGCAAGTGTTGTCAAATAG+CGG | + | chr7_1:79029794-79029813 | Msa1041410:intron | 35.0% |
| ! | AGCATTGTGGTTTTTGTTAG+AGG | - | chr7_1:79029856-79029875 | None:intergenic | 35.0% |
| !!! | GCTATCCTAGTTTTGCTATT+AGG | + | chr7_1:79029873-79029892 | Msa1041410:intron | 35.0% |
| ATTGCCCTAATAGCAAAACT+AGG | - | chr7_1:79029881-79029900 | None:intergenic | 35.0% | |
| ATTTGCAGAAACTTGAACAG+CGG | - | chr7_1:79029909-79029928 | None:intergenic | 35.0% | |
| ATTAAGAGGAGTGACTTGAT+AGG | - | chr7_1:79030010-79030029 | None:intergenic | 35.0% | |
| CACAAGTAACAAAAATGCTC+AGG | - | chr7_1:79030055-79030074 | None:intergenic | 35.0% | |
| ! | TGAATGTTCTTCAGGTTTCT+GGG | + | chr7_1:79030098-79030117 | Msa1041410:intron | 35.0% |
| TAAGACTGGAGAAAAGTCAA+AGG | + | chr7_1:79030345-79030364 | Msa1041410:CDS | 35.0% | |
| ATGAAAAGATAGATGGCACT+AGG | - | chr7_1:79030435-79030454 | None:intergenic | 35.0% | |
| GAGGTAAATATGCAAATCAC+AGG | - | chr7_1:79030465-79030484 | None:intergenic | 35.0% | |
| GTAAAAACAAAACCAGCCTT+CGG | - | chr7_1:79030587-79030606 | None:intergenic | 35.0% | |
| AGATTGAAGAACATCTTCGA+TGG | - | chr7_1:79030628-79030647 | None:intergenic | 35.0% | |
| TGTTTATTGCTTAGTTCGTC+TGG | - | chr7_1:79030658-79030677 | None:intergenic | 35.0% | |
| ATAAACAAGTAGCCTTCGAT+AGG | + | chr7_1:79030671-79030690 | Msa1041410:three_prime_UTR | 35.0% | |
| ATTAGTCCAATTCCTATCGA+AGG | - | chr7_1:79030686-79030705 | None:intergenic | 35.0% | |
| AACAGAAATAGTAAGCTGGC+TGG | - | chr7_1:79027063-79027082 | None:intergenic | 40.0% | |
| GAAAATTCATCACTGTGCCA+AGG | + | chr7_1:79027210-79027229 | Msa1041410:CDS | 40.0% | |
| TTCTTGGTGGAATTCTCTTC+TGG | + | chr7_1:79027238-79027257 | Msa1041410:CDS | 40.0% | |
| GAAGTTTGAGAGTGAGATTG+AGG | - | chr7_1:79027281-79027300 | None:intergenic | 40.0% | |
| TGAACATAGTGAGTGACGAA+AGG | - | chr7_1:79027318-79027337 | None:intergenic | 40.0% | |
| GTCACTCACTATGTTCAATC+CGG | + | chr7_1:79027321-79027340 | Msa1041410:CDS | 40.0% | |
| ! | TTTTTGTTACCTGGATCTGG+AGG | - | chr7_1:79027359-79027378 | None:intergenic | 40.0% |
| !!! | GTGCTCTGTTTTTTGTTACC+TGG | - | chr7_1:79027368-79027387 | None:intergenic | 40.0% |
| ! | TTTGGGTTATGCAGAGTTAC+AGG | + | chr7_1:79027464-79027483 | Msa1041410:intron | 40.0% |
| TTGGGTTATGCAGAGTTACA+GGG | + | chr7_1:79027465-79027484 | Msa1041410:intron | 40.0% | |
| ! | AATTTGGCTTCTGTGTAGAG+TGG | + | chr7_1:79027633-79027652 | Msa1041410:intron | 40.0% |
| ! | TATCTGAAATGCCTAGGCTT+AGG | - | chr7_1:79028131-79028150 | None:intergenic | 40.0% |
| AAAGCTGCTTGCTTATAGTG+GGG | + | chr7_1:79028210-79028229 | Msa1041410:intron | 40.0% | |
| ! | ATTTTCTGGGCCAACTAAGA+AGG | + | chr7_1:79028333-79028352 | Msa1041410:intron | 40.0% |
| CTGATAAACATCCAGTCCAA+GGG | - | chr7_1:79028507-79028526 | None:intergenic | 40.0% | |
| !! | TTTGTGGCTCTTGTTGGTTT+AGG | + | chr7_1:79028609-79028628 | Msa1041410:CDS | 40.0% |
| ! | GTTGTTGCTGGCCTATTTAT+TGG | + | chr7_1:79028760-79028779 | Msa1041410:CDS | 40.0% |
| GGATTCCGAGTCCAATAAAT+AGG | - | chr7_1:79028774-79028793 | None:intergenic | 40.0% | |
| TTTATTGGACTCGGAATCCT+TGG | + | chr7_1:79028775-79028794 | Msa1041410:CDS | 40.0% | |
| TTGGATAAGCAAAGAGCAGT+AGG | - | chr7_1:79029057-79029076 | None:intergenic | 40.0% | |
| AAACTTGGAGTTGGAAGTTC+AGG | - | chr7_1:79029082-79029101 | None:intergenic | 40.0% | |
| GCAGTGTGAAACTCAAAACT+TGG | - | chr7_1:79029097-79029116 | None:intergenic | 40.0% | |
| GAGTTTCACACTGCTTTCAA+TGG | + | chr7_1:79029103-79029122 | Msa1041410:CDS | 40.0% | |
| !! | TGCTTTCAATGGTGTTGCAT+TGG | + | chr7_1:79029114-79029133 | Msa1041410:CDS | 40.0% |
| !! | GCTTTCAATGGTGTTGCATT+GGG | + | chr7_1:79029115-79029134 | Msa1041410:CDS | 40.0% |
| !! | ATAACGGCTTTATTCCGTGA+AGG | + | chr7_1:79029356-79029375 | Msa1041410:intron | 40.0% |
| TCGTCAAATAATGGCTGTAG+TGG | + | chr7_1:79029432-79029451 | Msa1041410:intron | 40.0% | |
| TAAAGCAGTGTTGTCGATCT+CGG | - | chr7_1:79029510-79029529 | None:intergenic | 40.0% | |
| !! | GTTTTGAACAGTGACGTTTG+AGG | + | chr7_1:79029630-79029649 | Msa1041410:intron | 40.0% |
| GCTATAGTGCTATAGCATAC+CGG | + | chr7_1:79029818-79029837 | Msa1041410:intron | 40.0% | |
| GCAAAACTAGGATAGCATTG+TGG | - | chr7_1:79029869-79029888 | None:intergenic | 40.0% | |
| CAATAGCGTCTAGCTGAATT+AGG | + | chr7_1:79029953-79029972 | Msa1041410:intron | 40.0% | |
| ! | GTGAATGTTCTTCAGGTTTC+TGG | + | chr7_1:79030097-79030116 | Msa1041410:intron | 40.0% |
| ! | GAATGTTCTTCAGGTTTCTG+GGG | + | chr7_1:79030099-79030118 | Msa1041410:intron | 40.0% |
| !! | AGTTCTGAAGAGAACAAACG+AGG | - | chr7_1:79030163-79030182 | None:intergenic | 40.0% |
| ACTGACAGTGCTTGTATTCA+TGG | + | chr7_1:79030180-79030199 | Msa1041410:CDS | 40.0% | |
| CTGACAGTGCTTGTATTCAT+GGG | + | chr7_1:79030181-79030200 | Msa1041410:CDS | 40.0% | |
| ATTCATGGGAAGAATGCTCT+TGG | + | chr7_1:79030195-79030214 | Msa1041410:CDS | 40.0% | |
| TTCATGGGAAGAATGCTCTT+GGG | + | chr7_1:79030196-79030215 | Msa1041410:CDS | 40.0% | |
| GCAGTAAGACTCTTGCAAAA+TGG | + | chr7_1:79030248-79030267 | Msa1041410:CDS | 40.0% | |
| TGCAAAATGGATAATTCCCG+TGG | + | chr7_1:79030261-79030280 | Msa1041410:CDS | 40.0% | |
| ATTCAATGTGGGGATATAGG+TGG | - | chr7_1:79030320-79030339 | None:intergenic | 40.0% | |
| ACCTATATCCCCACATTGAA+TGG | + | chr7_1:79030319-79030338 | Msa1041410:CDS | 40.0% | |
| CCTATATCCCCACATTGAAT+GGG | + | chr7_1:79030320-79030339 | Msa1041410:CDS | 40.0% | |
| CTATATCCCCACATTGAATG+GGG | + | chr7_1:79030321-79030340 | Msa1041410:CDS | 40.0% | |
| CGTCGAGATGAAATTTCACT+GGG | - | chr7_1:79030556-79030575 | None:intergenic | 40.0% | |
| TCGTCGAGATGAAATTTCAC+TGG | - | chr7_1:79030557-79030576 | None:intergenic | 40.0% | |
| AAGTAGCCTTCGATAGGAAT+TGG | + | chr7_1:79030677-79030696 | Msa1041410:three_prime_UTR | 40.0% | |
| GTAGAGTGGTCATGGTCAAT+TGG | + | chr7_1:79027647-79027666 | Msa1041410:intron | 45.0% | |
| TAGGCAGATGACGTTGTTGA+TGG | + | chr7_1:79027671-79027690 | Msa1041410:CDS | 45.0% | |
| ! | CTTATAGTGGGGTTGCTGTT+GGG | + | chr7_1:79028221-79028240 | Msa1041410:intron | 45.0% |
| GCTGATAAACATCCAGTCCA+AGG | - | chr7_1:79028508-79028527 | None:intergenic | 45.0% | |
| GAGTCAGGACATAGTGCAAA+AGG | - | chr7_1:79028533-79028552 | None:intergenic | 45.0% | |
| TTCCCTTGCTTGCTTGTTTG+TGG | + | chr7_1:79028593-79028612 | Msa1041410:CDS | 45.0% | |
| AGCCACAAACAAGCAAGCAA+GGG | - | chr7_1:79028598-79028617 | None:intergenic | 45.0% | |
| TGCTTGTTTGTGGCTCTTGT+TGG | + | chr7_1:79028603-79028622 | Msa1041410:CDS | 45.0% | |
| !! | TGGCTCTTGTTGGTTTAGGT+AGG | + | chr7_1:79028613-79028632 | Msa1041410:intron | 45.0% |
| ! | GCTGGCCTATTTATTGGACT+CGG | + | chr7_1:79028766-79028785 | Msa1041410:CDS | 45.0% |
| CAACTGTAAGCCAAAGTCCA+AGG | - | chr7_1:79028795-79028814 | None:intergenic | 45.0% | |
| ATAGACAGTTTCGTGGTCTC+AGG | + | chr7_1:79028823-79028842 | Msa1041410:CDS | 45.0% | |
| TAGACAGTTTCGTGGTCTCA+GGG | + | chr7_1:79028824-79028843 | Msa1041410:CDS | 45.0% | |
| TTCGTGGTCTCAGGGAAAAA+CGG | + | chr7_1:79028832-79028851 | Msa1041410:CDS | 45.0% | |
| CCCATTCAATGTGGGGATAT+AGG | - | chr7_1:79030323-79030342 | None:intergenic | 45.0% | |
| TCTTAGCCCCATTCAATGTG+GGG | - | chr7_1:79030330-79030349 | None:intergenic | 45.0% | |
| GTCTTAGCCCCATTCAATGT+GGG | - | chr7_1:79030331-79030350 | None:intergenic | 45.0% | |
| AGTCTTAGCCCCATTCAATG+TGG | - | chr7_1:79030332-79030351 | None:intergenic | 45.0% | |
| ACATTGAATGGGGCTAAGAC+TGG | + | chr7_1:79030331-79030350 | Msa1041410:CDS | 45.0% | |
| AAGGCTTTCGACGTTGATAC+CGG | + | chr7_1:79030364-79030383 | Msa1041410:CDS | 45.0% | |
| TCCAATATGCAGGTCTTGCA+TGG | + | chr7_1:79030398-79030417 | Msa1041410:CDS | 45.0% | |
| ACCATGCAAGACCTGCATAT+TGG | - | chr7_1:79030402-79030421 | None:intergenic | 45.0% | |
| CGAGATGAAATTTCACTGGG+TGG | - | chr7_1:79030553-79030572 | None:intergenic | 45.0% | |
| GAAATAGTAAGCTGGCTGGC+TGG | - | chr7_1:79027059-79027078 | None:intergenic | 50.0% | |
| TTCCACCAAGAATCGCACCT+TGG | - | chr7_1:79027230-79027249 | None:intergenic | 50.0% | |
| CTGGATCTGGAGGAGAATTG+GGG | - | chr7_1:79027349-79027368 | None:intergenic | 50.0% | |
| CCTGGATCTGGAGGAGAATT+GGG | - | chr7_1:79027350-79027369 | None:intergenic | 50.0% | |
| ACCTGGATCTGGAGGAGAAT+TGG | - | chr7_1:79027351-79027370 | None:intergenic | 50.0% | |
| GTTATGCAGAGTTACAGGGC+TGG | + | chr7_1:79027469-79027488 | Msa1041410:intron | 50.0% | |
| GCTTCTGTGTAGAGTGGTCA+TGG | + | chr7_1:79027639-79027658 | Msa1041410:intron | 50.0% | |
| GTGGTCATGGTCAATTGGCT+AGG | + | chr7_1:79027652-79027671 | Msa1041410:CDS | 50.0% | |
| GTAGCAGTTACTCTCCTCAC+TGG | - | chr7_1:79027882-79027901 | None:intergenic | 50.0% | |
| CTTTCCATGGACCTAAGCCT+AGG | + | chr7_1:79028117-79028136 | Msa1041410:intron | 50.0% | |
| AATGCCTAGGCTTAGGTCCA+TGG | - | chr7_1:79028124-79028143 | None:intergenic | 50.0% | |
| ! | GCTTATAGTGGGGTTGCTGT+TGG | + | chr7_1:79028220-79028239 | Msa1041410:intron | 50.0% |
| CTGGGCCAACTAAGAAGGAT+TGG | + | chr7_1:79028338-79028357 | Msa1041410:intron | 50.0% | |
| GAGCCACAAACAAGCAAGCA+AGG | - | chr7_1:79028599-79028618 | None:intergenic | 50.0% | |
| GACTCGGAATCCTTGGACTT+TGG | + | chr7_1:79028782-79028801 | Msa1041410:CDS | 50.0% | |
| GGAGTTGGAAGTTCAGGAGT+TGG | - | chr7_1:79029076-79029095 | None:intergenic | 50.0% | |
| CGTCTAGCTGAATTAGGCTC+AGG | + | chr7_1:79029959-79029978 | Msa1041410:intron | 50.0% | |
| CAGTGCTGTGGTGAAACTGA+TGG | - | chr7_1:79030138-79030157 | None:intergenic | 50.0% | |
| ACAAACGAGGAACAGTGCTG+TGG | - | chr7_1:79030150-79030169 | None:intergenic | 50.0% | |
| TCCCGTGGTAGCAAACACAT+TGG | + | chr7_1:79030276-79030295 | Msa1041410:CDS | 50.0% | |
| ! | CCCAATGTGTTTGCTACCAC+GGG | - | chr7_1:79030280-79030299 | None:intergenic | 50.0% |
| CCCGTGGTAGCAAACACATT+GGG | + | chr7_1:79030277-79030296 | Msa1041410:CDS | 50.0% | |
| ! | GCCCAATGTGTTTGCTACCA+CGG | - | chr7_1:79030281-79030300 | None:intergenic | 50.0% |
| TCTCGACGAGAATTCACCGA+AGG | + | chr7_1:79030568-79030587 | Msa1041410:three_prime_UTR | 50.0% | |
| CTGTGCCAAGGTGCGATTCT+TGG | + | chr7_1:79027222-79027241 | Msa1041410:CDS | 55.0% | |
| TGCCAAGGTGCGATTCTTGG+TGG | + | chr7_1:79027225-79027244 | Msa1041410:CDS | 55.0% | |
| CTGGAGGAGAATTGGGGTTC+CGG | - | chr7_1:79027343-79027362 | None:intergenic | 55.0% | |
| CCCAATTCTCCTCCAGATCC+AGG | + | chr7_1:79027347-79027366 | Msa1041410:CDS | 55.0% | |
| ACTGGTGGAGATGCAGGTCT+TGG | - | chr7_1:79027864-79027883 | None:intergenic | 55.0% | |
| GCAGTTACTCTCCTCACTGG+TGG | - | chr7_1:79027879-79027898 | None:intergenic | 55.0% | |
| TGCAGGTCTTGCATGGTCTG+TGG | + | chr7_1:79030405-79030424 | Msa1041410:CDS | 55.0% | |
| GACGAGAATTCACCGAAGGC+TGG | + | chr7_1:79030572-79030591 | Msa1041410:three_prime_UTR | 55.0% | |
| GACCTGCATCTCCACCAGTG+AGG | + | chr7_1:79027865-79027884 | Msa1041410:CDS | 60.0% | |
| CTCCTCACTGGTGGAGATGC+AGG | - | chr7_1:79027870-79027889 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79026967 | 79030712 | 79026967 | ID=Msa1041410;Name=Msa1041410 |
| chr7_1 | mRNA | 79026967 | 79030712 | 79026967 | ID=Msa1041410-mRNA-1;Parent=Msa1041410;Name=Msa1041410-mRNA-1;_AED=0.32;_eAED=0.32;_QI=215|1|1|1|0.87|0.77|9|244|389 |
| chr7_1 | exon | 79026967 | 79027100 | 79026967 | ID=Msa1041410-mRNA-1:exon:21220;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79027126 | 79027368 | 79027126 | ID=Msa1041410-mRNA-1:exon:21221;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79027478 | 79027573 | 79027478 | ID=Msa1041410-mRNA-1:exon:21222;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79027651 | 79027725 | 79027651 | ID=Msa1041410-mRNA-1:exon:21223;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79027846 | 79027976 | 79027846 | ID=Msa1041410-mRNA-1:exon:21224;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79028527 | 79028630 | 79028527 | ID=Msa1041410-mRNA-1:exon:21225;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79028725 | 79028853 | 79028725 | ID=Msa1041410-mRNA-1:exon:21226;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79029026 | 79029141 | 79029026 | ID=Msa1041410-mRNA-1:exon:21227;Parent=Msa1041410-mRNA-1 |
| chr7_1 | exon | 79030112 | 79030712 | 79030112 | ID=Msa1041410-mRNA-1:exon:21228;Parent=Msa1041410-mRNA-1 |
| chr7_1 | five_prime_UTR | 79026967 | 79027100 | 79026967 | ID=Msa1041410-mRNA-1:five_prime_utr;Parent=Msa1041410-mRNA-1 |
| chr7_1 | five_prime_UTR | 79027126 | 79027206 | 79027126 | ID=Msa1041410-mRNA-1:five_prime_utr;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79027207 | 79027368 | 79027207 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79027478 | 79027573 | 79027478 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79027651 | 79027725 | 79027651 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79027846 | 79027976 | 79027846 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79028527 | 79028630 | 79028527 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79028725 | 79028853 | 79028725 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79029026 | 79029141 | 79029026 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | CDS | 79030112 | 79030468 | 79030112 | ID=Msa1041410-mRNA-1:cds;Parent=Msa1041410-mRNA-1 |
| chr7_1 | three_prime_UTR | 79030469 | 79030712 | 79030469 | ID=Msa1041410-mRNA-1:three_prime_utr;Parent=Msa1041410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
