Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166600 | XP_013450297.1 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166600 | sp|Q9M2G7|LPPD_ARATH | 65.196 | 408 | 123 | 1 | 1 | 389 | 9 | 416 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166600 | G8A197 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017590 | Msa1166600 | 0.835677 | 1.459588e-56 | -8.615850e-47 |
| Msa0079730 | Msa1166600 | 0.842972 | 1.865040e-58 | -8.615850e-47 |
| Msa0714170 | Msa1166600 | -0.802512 | 5.416210e-49 | -8.615850e-47 |
| Msa0835520 | Msa1166600 | -0.808052 | 3.742110e-50 | -8.615850e-47 |
| Msa0127580 | Msa1166600 | 0.841041 | 6.041484e-58 | -8.615850e-47 |
| Msa0166570 | Msa1166600 | -0.805996 | 1.019330e-49 | -8.615850e-47 |
| Msa0172180 | Msa1166600 | 0.840908 | 6.549181e-58 | -8.615850e-47 |
| Msa0377970 | Msa1166600 | 0.828061 | 1.108002e-54 | -8.615850e-47 |
| Msa0418430 | Msa1166600 | -0.810289 | 1.241052e-50 | -8.615850e-47 |
| Msa0427620 | Msa1166600 | 0.824425 | 8.126800e-54 | -8.615850e-47 |
| Msa0465800 | Msa1166600 | -0.822708 | 2.050526e-53 | -8.615850e-47 |
| Msa0472740 | Msa1166600 | -0.829093 | 6.242193e-55 | -8.615850e-47 |
| Msa0481490 | Msa1166600 | -0.823243 | 1.538003e-53 | -8.615850e-47 |
| Msa1031150 | Msa1166600 | -0.817608 | 3.019890e-52 | -8.615850e-47 |
| Msa1041410 | Msa1166600 | 0.999081 | 3.133579e-289 | -8.615850e-47 |
| Msa1070250 | Msa1166600 | -0.814697 | 1.350205e-51 | -8.615850e-47 |
| Msa1081470 | Msa1166600 | 0.924964 | 3.479287e-90 | -8.615850e-47 |
| Msa1089100 | Msa1166600 | 0.823296 | 1.495339e-53 | -8.615850e-47 |
| Msa1098180 | Msa1166600 | 0.825447 | 4.664986e-54 | -8.615850e-47 |
| Msa0253160 | Msa1166600 | -0.808571 | 2.900587e-50 | -8.615850e-47 |
| Msa0291940 | Msa1166600 | -0.806158 | 9.421630e-50 | -8.615850e-47 |
| Msa0358290 | Msa1166600 | -0.811756 | 5.972100e-51 | -8.615850e-47 |
| Msa1119570 | Msa1166600 | -0.819019 | 1.446562e-52 | -8.615850e-47 |
| Msa1158090 | Msa1166600 | -0.805019 | 1.633634e-49 | -8.615850e-47 |
| Msa1166600 | Msa1177240 | -0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa1166600 | Msa1281270 | -0.823832 | 1.119911e-53 | -8.615850e-47 |
| Msa1166600 | Msa1317030 | -0.817988 | 2.477681e-52 | -8.615850e-47 |
| Msa1166600 | Msa1320380 | -0.828249 | 9.984756e-55 | -8.615850e-47 |
| Msa1166600 | Msa1388240 | -0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa1166600 | Msa1402430 | 0.913290 | 7.302351e-84 | -8.615850e-47 |
| Msa1166600 | Msa1421870 | -0.803923 | 2.765234e-49 | -8.615850e-47 |
| Msa1166600 | Msa1423580 | 0.832636 | 8.443500e-56 | -8.615850e-47 |
| Msa0518130 | Msa1166600 | 0.827783 | 1.292711e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166600 | MtrunA17_Chr7g0268351 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166600 | AT3G58490.1 | 65.196 | 408 | 123 | 1 | 1 | 389 | 9 | 416 | 0.0 | 566 |
| Msa1166600 | AT3G58490.2 | 66.562 | 317 | 87 | 1 | 92 | 389 | 30 | 346 | 1.71e-161 | 457 |
Find 112 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAATGTTCTTCAGGTTTC+TGG | 0.066140 | 7_4:+58699680 | Msa1166600:intron |
| CTTAATACAGTTTGCTTATC+TGG | 0.089322 | 7_4:+58697537 | Msa1166600:CDS |
| CAAGAAAATGCTTTGGAATA+TGG | 0.194037 | 7_4:+58697495 | Msa1166600:CDS |
| GTTGTTGCTGGCCTATTTAT+TGG | 0.246125 | 7_4:+58698343 | Msa1166600:CDS |
| TTTGGGTTATGCAGAGTTAC+AGG | 0.286499 | 7_4:+58697047 | Msa1166600:intron |
| TTCTTGGTGGAATTCTCTTC+TGG | 0.291249 | 7_4:+58696821 | Msa1166600:CDS |
| CCTGGATCTGGAGGAGAATT+GGG | 0.309427 | 7_4:-58696930 | None:intergenic |
| GACTCGGAATCCTTGGACTT+TGG | 0.316676 | 7_4:+58698365 | Msa1166600:CDS |
| ACCTGGATCTGGAGGAGAAT+TGG | 0.317722 | 7_4:-58696931 | None:intergenic |
| GGGATAAAAGCAGTGTAAAA+TGG | 0.320919 | 7_4:-58697121 | None:intergenic |
| TTCCCTTGCTTGCTTGTTTG+TGG | 0.322437 | 7_4:+58698176 | Msa1166600:CDS |
| GGATTCCGAGTCCAATAAAT+AGG | 0.341580 | 7_4:-58698354 | None:intergenic |
| CTGGAGGAGAATTGGGGTTC+CGG | 0.344682 | 7_4:-58696923 | None:intergenic |
| TGAATGTTCTTCAGGTTTCT+GGG | 0.347452 | 7_4:+58699681 | Msa1166600:intron |
| AAACTTGGAGTTGGAAGTTC+AGG | 0.348718 | 7_4:-58698662 | None:intergenic |
| AGTTTGATTGATGTTGTTGC+TGG | 0.357835 | 7_4:+58698331 | Msa1166600:CDS |
| TGCTTGTTTGTGGCTCTTGT+TGG | 0.362453 | 7_4:+58698186 | Msa1166600:CDS |
| ACCTATATCCCCACATTGAA+TGG | 0.364000 | 7_4:+58699902 | Msa1166600:CDS |
| TGTTTATTGCTTAGTTCGTC+TGG | 0.375962 | 7_4:-58700238 | None:intergenic |
| GCAGTAAGACTCTTGCAAAA+TGG | 0.377467 | 7_4:+58699831 | Msa1166600:CDS |
| ACTGACAGTGCTTGTATTCA+TGG | 0.384822 | 7_4:+58699763 | Msa1166600:CDS |
| TTTGTGGCTCTTGTTGGTTT+AGG | 0.391774 | 7_4:+58698192 | Msa1166600:CDS |
| ATAGACAGTTTCGTGGTCTC+AGG | 0.395623 | 7_4:+58698406 | Msa1166600:CDS |
| CCCATTCAATGTGGGGATAT+AGG | 0.396341 | 7_4:-58699903 | None:intergenic |
| AAGTAGCCTTCGATAGGAAT+TGG | 0.400587 | 7_4:+58700260 | Msa1166600:three_prime_UTR |
| GGTGCCTATATTACTTACTT+TGG | 0.410570 | 7_4:+58698150 | Msa1166600:CDS |
| ACCATGCAAGACCTGCATAT+TGG | 0.414363 | 7_4:-58699982 | None:intergenic |
| CCTATATCCCCACATTGAAT+GGG | 0.420666 | 7_4:+58699903 | Msa1166600:CDS |
| TTTGTAGGAAGAATTTATCT+TGG | 0.420992 | 7_4:+58698301 | Msa1166600:intron |
| ACTGGTGGAGATGCAGGTCT+TGG | 0.428353 | 7_4:-58697444 | None:intergenic |
| AACTCCAAAGTAAGTAATAT+AGG | 0.432966 | 7_4:-58698154 | None:intergenic |
| TTTATTGGACTCGGAATCCT+TGG | 0.433430 | 7_4:+58698358 | Msa1166600:CDS |
| CTGTGCCAAGGTGCGATTCT+TGG | 0.437065 | 7_4:+58696805 | Msa1166600:CDS |
| GAGTTTCACACTGCTTTCAA+TGG | 0.438556 | 7_4:+58698686 | Msa1166600:CDS |
| GCTTTCAATGGTGTTGCATT+GGG | 0.446391 | 7_4:+58698698 | Msa1166600:CDS |
| CTTGAATTTGAGTATGAGTC+AGG | 0.447504 | 7_4:-58698128 | None:intergenic |
| TCCAATATGCAGGTCTTGCA+TGG | 0.448223 | 7_4:+58699981 | Msa1166600:CDS |
| AGATGAGCAAGAAAATGCTT+TGG | 0.451289 | 7_4:+58697488 | Msa1166600:CDS |
| CTCCTCACTGGTGGAGATGC+AGG | 0.451870 | 7_4:-58697450 | None:intergenic |
| ACATTGAATGGGGCTAAGAC+TGG | 0.454763 | 7_4:+58699914 | Msa1166600:CDS |
| TTAATACAGTTTGCTTATCT+GGG | 0.458973 | 7_4:+58697538 | Msa1166600:CDS |
| CCCAATTCTCCTCCAGATCC+AGG | 0.459052 | 7_4:+58696930 | Msa1166600:CDS |
| TGCTTTCAATGGTGTTGCAT+TGG | 0.459262 | 7_4:+58698697 | Msa1166600:CDS |
| ATTCATGGGAAGAATGCTCT+TGG | 0.465240 | 7_4:+58699778 | Msa1166600:CDS |
| TCGTCGAGATGAAATTTCAC+TGG | 0.468374 | 7_4:-58700137 | None:intergenic |
| AAGGCTTTCGACGTTGATAC+CGG | 0.469002 | 7_4:+58699947 | Msa1166600:CDS |
| GACGAGAATTCACCGAAGGC+TGG | 0.469167 | 7_4:+58700155 | Msa1166600:three_prime_UTR |
| GTCTTAGCCCCATTCAATGT+GGG | 0.476496 | 7_4:-58699911 | None:intergenic |
| GAGCCACAAACAAGCAAGCA+AGG | 0.478723 | 7_4:-58698179 | None:intergenic |
| GAGTCAGGACATAGTGCAAA+AGG | 0.482369 | 7_4:-58698113 | None:intergenic |
| CTGACTCATACTCAAATTCA+AGG | 0.485216 | 7_4:+58698129 | Msa1166600:CDS |
| GTATTAAGTGTGTGAGAAGA+AGG | 0.494461 | 7_4:-58697522 | None:intergenic |
| ATTAGATTTCTCCAATATGC+AGG | 0.497088 | 7_4:+58699971 | Msa1166600:CDS |
| CCCGTGGTAGCAAACACATT+GGG | 0.500346 | 7_4:+58699860 | Msa1166600:CDS |
| GTCACTCACTATGTTCAATC+CGG | 0.503422 | 7_4:+58696904 | Msa1166600:CDS |
| CCCAATGTGTTTGCTACCAC+GGG | 0.503942 | 7_4:-58699860 | None:intergenic |
| GCTGGCCTATTTATTGGACT+CGG | 0.504462 | 7_4:+58698349 | Msa1166600:CDS |
| GTAGAGTGGTCATGGTCAAT+TGG | 0.504695 | 7_4:+58697230 | Msa1166600:intron |
| GTAGCAGTTACTCTCCTCAC+TGG | 0.505620 | 7_4:-58697462 | None:intergenic |
| ATACATACCCAGAATAACAT+AGG | 0.508465 | 7_4:-58697142 | None:intergenic |
| TTATCTAGGGAACTGTATAA+AGG | 0.513298 | 7_4:+58697287 | Msa1166600:CDS |
| GGAGTTGGAAGTTCAGGAGT+TGG | 0.515222 | 7_4:-58698656 | None:intergenic |
| GAAATAGTAAGCTGGCTGGC+TGG | 0.519695 | 7_4:-58696639 | None:intergenic |
| TTCGTGTATGAAAAGATAGA+TGG | 0.520058 | 7_4:-58700022 | None:intergenic |
| TGAAACTCAAAACTTGGAGT+TGG | 0.527338 | 7_4:-58698671 | None:intergenic |
| GCAGTGTGAAACTCAAAACT+TGG | 0.530399 | 7_4:-58698677 | None:intergenic |
| TTGAAACAGAAATAGTAAGC+TGG | 0.531325 | 7_4:-58696647 | None:intergenic |
| TTGGATAAGCAAAGAGCAGT+AGG | 0.537394 | 7_4:-58698637 | None:intergenic |
| GAAGTTTGAGAGTGAGATTG+AGG | 0.540461 | 7_4:-58696861 | None:intergenic |
| GCCCAATGTGTTTGCTACCA+CGG | 0.540876 | 7_4:-58699861 | None:intergenic |
| GCTTCTGTGTAGAGTGGTCA+TGG | 0.542830 | 7_4:+58697222 | Msa1166600:intron |
| TAGGCAGATGACGTTGTTGA+TGG | 0.550670 | 7_4:+58697254 | Msa1166600:CDS |
| GAGGTAAATATGCAAATCAC+AGG | 0.552763 | 7_4:-58700045 | None:intergenic |
| CGTCGAGATGAAATTTCACT+GGG | 0.553071 | 7_4:-58700136 | None:intergenic |
| TTCATGGGAAGAATGCTCTT+GGG | 0.553751 | 7_4:+58699779 | Msa1166600:CDS |
| TGCCAAGGTGCGATTCTTGG+TGG | 0.554208 | 7_4:+58696808 | Msa1166600:CDS |
| ATATTGGAGAAATCTAATTC+CGG | 0.556168 | 7_4:-58699966 | None:intergenic |
| TGAATACATAGACAGTTTCG+TGG | 0.564407 | 7_4:+58698399 | Msa1166600:CDS |
| AGCCACAAACAAGCAAGCAA+GGG | 0.567668 | 7_4:-58698178 | None:intergenic |
| GTGGTCATGGTCAATTGGCT+AGG | 0.568631 | 7_4:+58697235 | Msa1166600:CDS |
| TAGACAGTTTCGTGGTCTCA+GGG | 0.569578 | 7_4:+58698407 | Msa1166600:CDS |
| GAATGTTCTTCAGGTTTCTG+GGG | 0.580420 | 7_4:+58699682 | Msa1166600:intron |
| TTGGGTTATGCAGAGTTACA+GGG | 0.581088 | 7_4:+58697048 | Msa1166600:intron |
| AGATTGAAGAACATCTTCGA+TGG | 0.584691 | 7_4:-58700208 | None:intergenic |
| CTGGATCTGGAGGAGAATTG+GGG | 0.585063 | 7_4:-58696929 | None:intergenic |
| ATAAACAAGTAGCCTTCGAT+AGG | 0.585546 | 7_4:+58700254 | Msa1166600:three_prime_UTR |
| CTGACAGTGCTTGTATTCAT+GGG | 0.586833 | 7_4:+58699764 | Msa1166600:CDS |
| AATTTCACGATTAGAATCGT+AGG | 0.590889 | 7_4:-58699806 | None:intergenic |
| CAACTGTAAGCCAAAGTCCA+AGG | 0.591678 | 7_4:-58698375 | None:intergenic |
| ATTAGTCCAATTCCTATCGA+AGG | 0.596421 | 7_4:-58700266 | None:intergenic |
| AACAGAAATAGTAAGCTGGC+TGG | 0.600135 | 7_4:-58696643 | None:intergenic |
| GCAGTTACTCTCCTCACTGG+TGG | 0.601958 | 7_4:-58697459 | None:intergenic |
| TACATACCCAGAATAACATA+GGG | 0.604961 | 7_4:-58697141 | None:intergenic |
| TCCCGTGGTAGCAAACACAT+TGG | 0.609245 | 7_4:+58699859 | Msa1166600:CDS |
| ATGAAAAGATAGATGGCACT+AGG | 0.612679 | 7_4:-58700015 | None:intergenic |
| TGCAAAATGGATAATTCCCG+TGG | 0.613589 | 7_4:+58699844 | Msa1166600:CDS |
| AGTCTTAGCCCCATTCAATG+TGG | 0.617212 | 7_4:-58699912 | None:intergenic |
| GTTATGCAGAGTTACAGGGC+TGG | 0.618352 | 7_4:+58697052 | Msa1166600:intron |
| GAAAATTCATCACTGTGCCA+AGG | 0.630218 | 7_4:+58696793 | Msa1166600:CDS |
| TAAGACTGGAGAAAAGTCAA+AGG | 0.630797 | 7_4:+58699928 | Msa1166600:CDS |
| CGAGATGAAATTTCACTGGG+TGG | 0.632988 | 7_4:-58700133 | None:intergenic |
| TGAACATAGTGAGTGACGAA+AGG | 0.636744 | 7_4:-58696898 | None:intergenic |
| TTCCACCAAGAATCGCACCT+TGG | 0.638229 | 7_4:-58696810 | None:intergenic |
| CTATATCCCCACATTGAATG+GGG | 0.639865 | 7_4:+58699904 | Msa1166600:CDS |
| TGCAGGTCTTGCATGGTCTG+TGG | 0.652360 | 7_4:+58699988 | Msa1166600:CDS |
| TCTTAGCCCCATTCAATGTG+GGG | 0.667373 | 7_4:-58699910 | None:intergenic |
| CAGTGCTGTGGTGAAACTGA+TGG | 0.676045 | 7_4:-58699718 | None:intergenic |
| TCTCGACGAGAATTCACCGA+AGG | 0.677592 | 7_4:+58700151 | Msa1166600:three_prime_UTR |
| ATTCAATGTGGGGATATAGG+TGG | 0.679967 | 7_4:-58699900 | None:intergenic |
| ACAAACGAGGAACAGTGCTG+TGG | 0.694315 | 7_4:-58699730 | None:intergenic |
| GACCTGCATCTCCACCAGTG+AGG | 0.716851 | 7_4:+58697448 | Msa1166600:CDS |
| AGTTCTGAAGAGAACAAACG+AGG | 0.763056 | 7_4:-58699743 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAGAGAATAAAATTAT+GGG | - | chr7_4:58696974-58696993 | None:intergenic | 10.0% |
| !!! | TTTTTAAGAGAATAAAATTA+TGG | - | chr7_4:58696975-58696994 | None:intergenic | 10.0% |
| !!! | ATTTTTGTTTTTTGAATTTT+TGG | + | chr7_4:58697029-58697048 | Msa1166600:intron | 10.0% |
| !!! | TTTTTGTTTTTTGAATTTTT+GGG | + | chr7_4:58697030-58697049 | Msa1166600:intron | 10.0% |
| !! | AAATTAAATAAGTATAAACA+TGG | + | chr7_4:58697946-58697965 | Msa1166600:intron | 10.0% |
| !! | ACAAAAATTAAATAAAATAG+AGG | - | chr7_4:58700067-58700086 | None:intergenic | 10.0% |
| !! | TTTAAGAGAATAAAATTATG+GGG | - | chr7_4:58696973-58696992 | None:intergenic | 15.0% |
| !! | TTAAAAAACTGTGAATTTAT+TGG | + | chr7_4:58697193-58697212 | Msa1166600:intron | 15.0% |
| !!! | ATATTTCTTATCTATTTTCT+GGG | + | chr7_4:58697903-58697922 | Msa1166600:intron | 15.0% |
| !!! | TTTATTTAATTTTTGTACAG+AGG | + | chr7_4:58700071-58700090 | Msa1166600:three_prime_UTR | 15.0% |
| !!! | TTATTTAATTTTTGTACAGA+GGG | + | chr7_4:58700072-58700091 | Msa1166600:three_prime_UTR | 15.0% |
| !!! | TTTTTAGAATACTAAGAAAG+TGG | + | chr7_4:58696561-58696580 | Msa1166600:five_prime_UTR | 20.0% |
| !! | GATAATAACAAGAACAAAAA+TGG | + | chr7_4:58696771-58696790 | Msa1166600:exon | 20.0% |
| !!! | TTTTAATTGAAAACTTTCCA+TGG | + | chr7_4:58697687-58697706 | Msa1166600:intron | 20.0% |
| !!! | CATATTTCTTATCTATTTTC+TGG | + | chr7_4:58697902-58697921 | Msa1166600:intron | 20.0% |
| !! | AATCAATTTAAACTGATGAT+CGG | - | chr7_4:58698005-58698024 | None:intergenic | 20.0% |
| !! | ATAAGATAAGTTAGAATACA+AGG | - | chr7_4:58698574-58698593 | None:intergenic | 20.0% |
| !! | ATATAATCTCGTAATTGTAT+AGG | + | chr7_4:58698806-58698825 | Msa1166600:intron | 20.0% |
| !! | TATAATCTCGTAATTGTATA+GGG | + | chr7_4:58698807-58698826 | Msa1166600:intron | 20.0% |
| !!! | TATTTAATTTTTGTACAGAG+GGG | + | chr7_4:58700073-58700092 | Msa1166600:three_prime_UTR | 20.0% |
| !!! | TATCTTGATGCTATTTTTTC+TGG | + | chr7_4:58697076-58697095 | Msa1166600:CDS | 25.0% |
| !!! | ATCTTGATGCTATTTTTTCT+GGG | + | chr7_4:58697077-58697096 | Msa1166600:CDS | 25.0% |
| !! | TTTTATCCCTATGTTATTCT+GGG | + | chr7_4:58697135-58697154 | Msa1166600:CDS | 25.0% |
| ! | ACTGTGAATTTATTGGAATT+TGG | + | chr7_4:58697200-58697219 | Msa1166600:intron | 25.0% |
| ! | GTTGTTGTATTTGATGTTTA+TGG | + | chr7_4:58697373-58697392 | Msa1166600:intron | 25.0% |
| !! | TTAATACAGTTTGCTTATCT+GGG | + | chr7_4:58697538-58697557 | Msa1166600:CDS | 25.0% |
| !! | CATTTTTATGCATGTGAAAT+TGG | + | chr7_4:58697566-58697585 | Msa1166600:intron | 25.0% |
| ! | TTAACTCTTTAGACATCTAT+AGG | + | chr7_4:58697624-58697643 | Msa1166600:intron | 25.0% |
| ! | ATCATGTAACTTGAATTGTA+AGG | - | chr7_4:58697875-58697894 | None:intergenic | 25.0% |
| !! | CATTAATATATGTTTTCCCT+TGG | + | chr7_4:58698071-58698090 | Msa1166600:intron | 25.0% |
| ! | AACTCCAAAGTAAGTAATAT+AGG | - | chr7_4:58698157-58698176 | None:intergenic | 25.0% |
| ! | TATTACTTCTAATCTGTTAG+TGG | + | chr7_4:58698225-58698244 | Msa1166600:intron | 25.0% |
| !!! | AATTGTTTGTTACCTTTTGT+AGG | + | chr7_4:58698286-58698305 | Msa1166600:intron | 25.0% |
| ! | AGATAAATTCTTCCTACAAA+AGG | - | chr7_4:58698301-58698320 | None:intergenic | 25.0% |
| ! | TTTGTAGGAAGAATTTATCT+TGG | + | chr7_4:58698301-58698320 | Msa1166600:intron | 25.0% |
| !! | CTAACTTATCTTATGTGTTT+TGG | + | chr7_4:58698580-58698599 | Msa1166600:intron | 25.0% |
| ! | TTGCTAAATAGCACTTATAA+CGG | + | chr7_4:58698923-58698942 | Msa1166600:intron | 25.0% |
| ! | TACAAAATGTCGTCAAATAA+TGG | + | chr7_4:58699006-58699025 | Msa1166600:intron | 25.0% |
| ! | TTCAAATTCTGAATGTTTCT+AGG | + | chr7_4:58699170-58699189 | Msa1166600:intron | 25.0% |
| !! | TCAAATTCTGAATGTTTCTA+GGG | + | chr7_4:58699171-58699190 | Msa1166600:intron | 25.0% |
| ! | TTTAATTGTGAATGTTCTTC+AGG | + | chr7_4:58699673-58699692 | Msa1166600:intron | 25.0% |
| !!! | TATAGGTGGTTGATTTTATT+GGG | - | chr7_4:58699889-58699908 | None:intergenic | 25.0% |
| !!! | ATATAGGTGGTTGATTTTAT+TGG | - | chr7_4:58699890-58699909 | None:intergenic | 25.0% |
| ! | ATATTGGAGAAATCTAATTC+CGG | - | chr7_4:58699969-58699988 | None:intergenic | 25.0% |
| TTGAAACAGAAATAGTAAGC+TGG | - | chr7_4:58696650-58696669 | None:intergenic | 30.0% | |
| ! | CTTTTATCCCTATGTTATTC+TGG | + | chr7_4:58697134-58697153 | Msa1166600:CDS | 30.0% |
| TACATACCCAGAATAACATA+GGG | - | chr7_4:58697144-58697163 | None:intergenic | 30.0% | |
| ATACATACCCAGAATAACAT+AGG | - | chr7_4:58697145-58697164 | None:intergenic | 30.0% | |
| TTATCTAGGGAACTGTATAA+AGG | + | chr7_4:58697287-58697306 | Msa1166600:CDS | 30.0% | |
| ATTTGATGTTTATGGACTCA+AGG | + | chr7_4:58697381-58697400 | Msa1166600:intron | 30.0% | |
| !!! | TTGTTGTTTTGTCACACTAA+AGG | + | chr7_4:58697407-58697426 | Msa1166600:intron | 30.0% |
| !! | CAAGAAAATGCTTTGGAATA+TGG | + | chr7_4:58697495-58697514 | Msa1166600:CDS | 30.0% |
| ! | CTTAATACAGTTTGCTTATC+TGG | + | chr7_4:58697537-58697556 | Msa1166600:CDS | 30.0% |
| ! | AGTTTTCCGTAAGTGAATAA+CGG | + | chr7_4:58697656-58697675 | Msa1166600:intron | 30.0% |
| AATTTGCCGTTATTCACTTA+CGG | - | chr7_4:58697665-58697684 | None:intergenic | 30.0% | |
| ! | AACAAATATCTGAAATGCCT+AGG | - | chr7_4:58697720-58697739 | None:intergenic | 30.0% |
| CTCTGACCAAATAATTGATT+AGG | + | chr7_4:58697841-58697860 | Msa1166600:intron | 30.0% | |
| TGCACACCTAATCAATTATT+TGG | - | chr7_4:58697850-58697869 | None:intergenic | 30.0% | |
| ! | TTTTTCCAATCCTTCTTAGT+TGG | - | chr7_4:58697929-58697948 | None:intergenic | 30.0% |
| ! | TCATTGTTCTGTTTTGCAAT+AGG | - | chr7_4:58698265-58698284 | None:intergenic | 30.0% |
| GTGCTGAAATATTCATTTAG+AGG | - | chr7_4:58698445-58698464 | None:intergenic | 30.0% | |
| CACTTCGATAACATTAAAAG+AGG | - | chr7_4:58698741-58698760 | None:intergenic | 30.0% | |
| ATAGACAAAAAGAGGAGTTT+GGG | + | chr7_4:58698883-58698902 | Msa1166600:intron | 30.0% | |
| ! | AATTTGTTCAGATTCCTTCA+CGG | - | chr7_4:58698956-58698975 | None:intergenic | 30.0% |
| ! | GCTCTAGATTACTTAAGTAT+TGG | + | chr7_4:58699131-58699150 | Msa1166600:intron | 30.0% |
| CAACATGCTCAAGATTAATA+TGG | - | chr7_4:58699325-58699344 | None:intergenic | 30.0% | |
| CATATTAATCTTGAGCATGT+TGG | + | chr7_4:58699323-58699342 | Msa1166600:intron | 30.0% | |
| GTTACAATTTGATATGCTTG+AGG | + | chr7_4:58699345-58699364 | Msa1166600:intron | 30.0% | |
| TTAGAGGATTCATCAAAATC+CGG | - | chr7_4:58699423-58699442 | None:intergenic | 30.0% | |
| !!! | CTATCCTAGTTTTGCTATTA+GGG | + | chr7_4:58699457-58699476 | Msa1166600:intron | 30.0% |
| GTGAATTGACGAATATTAAG+AGG | - | chr7_4:58699607-58699626 | None:intergenic | 30.0% | |
| TACAAGTAACAAAAATGCTC+AGG | - | chr7_4:58699638-58699657 | None:intergenic | 30.0% | |
| AATTTCACGATTAGAATCGT+AGG | - | chr7_4:58699809-58699828 | None:intergenic | 30.0% | |
| ATTAGATTTCTCCAATATGC+AGG | + | chr7_4:58699971-58699990 | Msa1166600:CDS | 30.0% | |
| TTCGTGTATGAAAAGATAGA+TGG | - | chr7_4:58700025-58700044 | None:intergenic | 30.0% | |
| !!! | CTGGTTTTGTTTTTACAAGT+AGG | + | chr7_4:58700174-58700193 | Msa1166600:three_prime_UTR | 30.0% |
| !!! | TGTTTTTTGTTACCTGGATC+TGG | - | chr7_4:58696945-58696964 | None:intergenic | 35.0% |
| GGGATAAAAGCAGTGTAAAA+TGG | - | chr7_4:58697124-58697143 | None:intergenic | 35.0% | |
| ! | ATGGCGTTTTGTGATTATCT+AGG | + | chr7_4:58697273-58697292 | Msa1166600:CDS | 35.0% |
| ! | TGGCGTTTTGTGATTATCTA+GGG | + | chr7_4:58697274-58697293 | Msa1166600:CDS | 35.0% |
| ! | TTTTGTCACACTAAAGGATG+TGG | + | chr7_4:58697413-58697432 | Msa1166600:intron | 35.0% |
| AGATGAGCAAGAAAATGCTT+TGG | + | chr7_4:58697488-58697507 | Msa1166600:CDS | 35.0% | |
| GTATTAAGTGTGTGAGAAGA+AGG | - | chr7_4:58697525-58697544 | None:intergenic | 35.0% | |
| TTAAAGCTGCTTGCTTATAG+TGG | + | chr7_4:58697791-58697810 | Msa1166600:intron | 35.0% | |
| TAAAGCTGCTTGCTTATAGT+GGG | + | chr7_4:58697792-58697811 | Msa1166600:intron | 35.0% | |
| ! | ATATATGTTTTCCCTTGGAC+TGG | + | chr7_4:58698076-58698095 | Msa1166600:intron | 35.0% |
| CTTGAATTTGAGTATGAGTC+AGG | - | chr7_4:58698131-58698150 | None:intergenic | 35.0% | |
| CTGACTCATACTCAAATTCA+AGG | + | chr7_4:58698129-58698148 | Msa1166600:CDS | 35.0% | |
| GGTGCCTATATTACTTACTT+TGG | + | chr7_4:58698150-58698169 | Msa1166600:CDS | 35.0% | |
| ! | TGTTAGTGGAATCCTACTTT+TGG | + | chr7_4:58698239-58698258 | Msa1166600:intron | 35.0% |
| ! | TTTTGCAATAGGCCAAAAGT+AGG | - | chr7_4:58698254-58698273 | None:intergenic | 35.0% |
| AGTTTGATTGATGTTGTTGC+TGG | + | chr7_4:58698331-58698350 | Msa1166600:CDS | 35.0% | |
| TGAATACATAGACAGTTTCG+TGG | + | chr7_4:58698399-58698418 | Msa1166600:CDS | 35.0% | |
| ! | TGGTTGCAGTTACAACTTTT+TGG | + | chr7_4:58698600-58698619 | Msa1166600:intron | 35.0% |
| ! | GGTTGCAGTTACAACTTTTT+GGG | + | chr7_4:58698601-58698620 | Msa1166600:intron | 35.0% |
| TGAAACTCAAAACTTGGAGT+TGG | - | chr7_4:58698674-58698693 | None:intergenic | 35.0% | |
| GTAGAGTCATAGACAAAAAG+AGG | + | chr7_4:58698875-58698894 | Msa1166600:intron | 35.0% | |
| CATAGACAAAAAGAGGAGTT+TGG | + | chr7_4:58698882-58698901 | Msa1166600:intron | 35.0% | |
| ! | TCAGAATTTGAAGTCTGATC+TGG | - | chr7_4:58699162-58699181 | None:intergenic | 35.0% |
| AAGTGAAGACATCAAATGTC+TGG | + | chr7_4:58699274-58699293 | Msa1166600:intron | 35.0% | |
| ! | AAGCAAGTGTTGTCAAATAG+CGG | + | chr7_4:58699377-58699396 | Msa1166600:intron | 35.0% |
| ! | AGCATTGTGGTTTTTGTTAG+AGG | - | chr7_4:58699439-58699458 | None:intergenic | 35.0% |
| !!! | GCTATCCTAGTTTTGCTATT+AGG | + | chr7_4:58699456-58699475 | Msa1166600:intron | 35.0% |
| ATTGCCCTAATAGCAAAACT+AGG | - | chr7_4:58699464-58699483 | None:intergenic | 35.0% | |
| AGCATTTGCAGAAACTTGAA+CGG | - | chr7_4:58699495-58699514 | None:intergenic | 35.0% | |
| ATTAAGAGGAGTGACTTGAT+AGG | - | chr7_4:58699593-58699612 | None:intergenic | 35.0% | |
| ! | TGAATGTTCTTCAGGTTTCT+GGG | + | chr7_4:58699681-58699700 | Msa1166600:intron | 35.0% |
| TAAGACTGGAGAAAAGTCAA+AGG | + | chr7_4:58699928-58699947 | Msa1166600:CDS | 35.0% | |
| ATGAAAAGATAGATGGCACT+AGG | - | chr7_4:58700018-58700037 | None:intergenic | 35.0% | |
| GAGGTAAATATGCAAATCAC+AGG | - | chr7_4:58700048-58700067 | None:intergenic | 35.0% | |
| GTAAAAACAAAACCAGCCTT+CGG | - | chr7_4:58700170-58700189 | None:intergenic | 35.0% | |
| AGATTGAAGAACATCTTCGA+TGG | - | chr7_4:58700211-58700230 | None:intergenic | 35.0% | |
| TGTTTATTGCTTAGTTCGTC+TGG | - | chr7_4:58700241-58700260 | None:intergenic | 35.0% | |
| ATAAACAAGTAGCCTTCGAT+AGG | + | chr7_4:58700254-58700273 | Msa1166600:three_prime_UTR | 35.0% | |
| ATTAGTCCAATTCCTATCGA+AGG | - | chr7_4:58700269-58700288 | None:intergenic | 35.0% | |
| AACAGAAATAGTAAGCTGGC+TGG | - | chr7_4:58696646-58696665 | None:intergenic | 40.0% | |
| GAAAATTCATCACTGTGCCA+AGG | + | chr7_4:58696793-58696812 | Msa1166600:CDS | 40.0% | |
| TTCTTGGTGGAATTCTCTTC+TGG | + | chr7_4:58696821-58696840 | Msa1166600:CDS | 40.0% | |
| GAAGTTTGAGAGTGAGATTG+AGG | - | chr7_4:58696864-58696883 | None:intergenic | 40.0% | |
| TGAACATAGTGAGTGACGAA+AGG | - | chr7_4:58696901-58696920 | None:intergenic | 40.0% | |
| GTCACTCACTATGTTCAATC+CGG | + | chr7_4:58696904-58696923 | Msa1166600:CDS | 40.0% | |
| ! | TTTTTGTTACCTGGATCTGG+AGG | - | chr7_4:58696942-58696961 | None:intergenic | 40.0% |
| !!! | GTGCTCTGTTTTTTGTTACC+TGG | - | chr7_4:58696951-58696970 | None:intergenic | 40.0% |
| ! | TTTGGGTTATGCAGAGTTAC+AGG | + | chr7_4:58697047-58697066 | Msa1166600:intron | 40.0% |
| TTGGGTTATGCAGAGTTACA+GGG | + | chr7_4:58697048-58697067 | Msa1166600:intron | 40.0% | |
| ! | AATTTGGCTTCTGTGTAGAG+TGG | + | chr7_4:58697216-58697235 | Msa1166600:intron | 40.0% |
| ! | TATCTGAAATGCCTAGGCTT+AGG | - | chr7_4:58697714-58697733 | None:intergenic | 40.0% |
| AAAGCTGCTTGCTTATAGTG+GGG | + | chr7_4:58697793-58697812 | Msa1166600:intron | 40.0% | |
| ! | ATTTTCTGGGCCAACTAAGA+AGG | + | chr7_4:58697916-58697935 | Msa1166600:intron | 40.0% |
| CTGATAAACATCCAGTCCAA+GGG | - | chr7_4:58698090-58698109 | None:intergenic | 40.0% | |
| !! | TTTGTGGCTCTTGTTGGTTT+AGG | + | chr7_4:58698192-58698211 | Msa1166600:CDS | 40.0% |
| ! | GTTGTTGCTGGCCTATTTAT+TGG | + | chr7_4:58698343-58698362 | Msa1166600:CDS | 40.0% |
| GGATTCCGAGTCCAATAAAT+AGG | - | chr7_4:58698357-58698376 | None:intergenic | 40.0% | |
| TTTATTGGACTCGGAATCCT+TGG | + | chr7_4:58698358-58698377 | Msa1166600:CDS | 40.0% | |
| TTGGATAAGCAAAGAGCAGT+AGG | - | chr7_4:58698640-58698659 | None:intergenic | 40.0% | |
| AAACTTGGAGTTGGAAGTTC+AGG | - | chr7_4:58698665-58698684 | None:intergenic | 40.0% | |
| GCAGTGTGAAACTCAAAACT+TGG | - | chr7_4:58698680-58698699 | None:intergenic | 40.0% | |
| GAGTTTCACACTGCTTTCAA+TGG | + | chr7_4:58698686-58698705 | Msa1166600:CDS | 40.0% | |
| !! | TGCTTTCAATGGTGTTGCAT+TGG | + | chr7_4:58698697-58698716 | Msa1166600:CDS | 40.0% |
| !! | GCTTTCAATGGTGTTGCATT+GGG | + | chr7_4:58698698-58698717 | Msa1166600:CDS | 40.0% |
| !! | ATAACGGCTTTATTCCGTGA+AGG | + | chr7_4:58698939-58698958 | Msa1166600:intron | 40.0% |
| TCGTCAAATAATGGCTGTAG+TGG | + | chr7_4:58699015-58699034 | Msa1166600:intron | 40.0% | |
| TAAAGCAGTGTTGTCGATCT+CGG | - | chr7_4:58699093-58699112 | None:intergenic | 40.0% | |
| !! | GTTTTGAACAGTGACGTTTG+AGG | + | chr7_4:58699213-58699232 | Msa1166600:intron | 40.0% |
| GCTATAGTGCTATAGCATAC+CGG | + | chr7_4:58699401-58699420 | Msa1166600:intron | 40.0% | |
| GCAAAACTAGGATAGCATTG+TGG | - | chr7_4:58699452-58699471 | None:intergenic | 40.0% | |
| ATTTGCAGAAACTTGAACGG+CGG | - | chr7_4:58699492-58699511 | None:intergenic | 40.0% | |
| CAATAGCGTCTAGCTGAATT+AGG | + | chr7_4:58699536-58699555 | Msa1166600:intron | 40.0% | |
| ! | GTGAATGTTCTTCAGGTTTC+TGG | + | chr7_4:58699680-58699699 | Msa1166600:intron | 40.0% |
| ! | GAATGTTCTTCAGGTTTCTG+GGG | + | chr7_4:58699682-58699701 | Msa1166600:intron | 40.0% |
| !! | AGTTCTGAAGAGAACAAACG+AGG | - | chr7_4:58699746-58699765 | None:intergenic | 40.0% |
| ACTGACAGTGCTTGTATTCA+TGG | + | chr7_4:58699763-58699782 | Msa1166600:CDS | 40.0% | |
| CTGACAGTGCTTGTATTCAT+GGG | + | chr7_4:58699764-58699783 | Msa1166600:CDS | 40.0% | |
| ATTCATGGGAAGAATGCTCT+TGG | + | chr7_4:58699778-58699797 | Msa1166600:CDS | 40.0% | |
| TTCATGGGAAGAATGCTCTT+GGG | + | chr7_4:58699779-58699798 | Msa1166600:CDS | 40.0% | |
| GCAGTAAGACTCTTGCAAAA+TGG | + | chr7_4:58699831-58699850 | Msa1166600:CDS | 40.0% | |
| TGCAAAATGGATAATTCCCG+TGG | + | chr7_4:58699844-58699863 | Msa1166600:CDS | 40.0% | |
| ATTCAATGTGGGGATATAGG+TGG | - | chr7_4:58699903-58699922 | None:intergenic | 40.0% | |
| ACCTATATCCCCACATTGAA+TGG | + | chr7_4:58699902-58699921 | Msa1166600:CDS | 40.0% | |
| CCTATATCCCCACATTGAAT+GGG | + | chr7_4:58699903-58699922 | Msa1166600:CDS | 40.0% | |
| CTATATCCCCACATTGAATG+GGG | + | chr7_4:58699904-58699923 | Msa1166600:CDS | 40.0% | |
| CGTCGAGATGAAATTTCACT+GGG | - | chr7_4:58700139-58700158 | None:intergenic | 40.0% | |
| TCGTCGAGATGAAATTTCAC+TGG | - | chr7_4:58700140-58700159 | None:intergenic | 40.0% | |
| AAGTAGCCTTCGATAGGAAT+TGG | + | chr7_4:58700260-58700279 | Msa1166600:three_prime_UTR | 40.0% | |
| GTAGAGTGGTCATGGTCAAT+TGG | + | chr7_4:58697230-58697249 | Msa1166600:intron | 45.0% | |
| TAGGCAGATGACGTTGTTGA+TGG | + | chr7_4:58697254-58697273 | Msa1166600:CDS | 45.0% | |
| ! | CTTATAGTGGGGTTGCTGTT+GGG | + | chr7_4:58697804-58697823 | Msa1166600:intron | 45.0% |
| GCTGATAAACATCCAGTCCA+AGG | - | chr7_4:58698091-58698110 | None:intergenic | 45.0% | |
| GAGTCAGGACATAGTGCAAA+AGG | - | chr7_4:58698116-58698135 | None:intergenic | 45.0% | |
| TTCCCTTGCTTGCTTGTTTG+TGG | + | chr7_4:58698176-58698195 | Msa1166600:CDS | 45.0% | |
| AGCCACAAACAAGCAAGCAA+GGG | - | chr7_4:58698181-58698200 | None:intergenic | 45.0% | |
| TGCTTGTTTGTGGCTCTTGT+TGG | + | chr7_4:58698186-58698205 | Msa1166600:CDS | 45.0% | |
| !! | TGGCTCTTGTTGGTTTAGGT+AGG | + | chr7_4:58698196-58698215 | Msa1166600:intron | 45.0% |
| ! | GCTGGCCTATTTATTGGACT+CGG | + | chr7_4:58698349-58698368 | Msa1166600:CDS | 45.0% |
| CAACTGTAAGCCAAAGTCCA+AGG | - | chr7_4:58698378-58698397 | None:intergenic | 45.0% | |
| ATAGACAGTTTCGTGGTCTC+AGG | + | chr7_4:58698406-58698425 | Msa1166600:CDS | 45.0% | |
| TAGACAGTTTCGTGGTCTCA+GGG | + | chr7_4:58698407-58698426 | Msa1166600:CDS | 45.0% | |
| TTCGTGGTCTCAGGGAAAAA+CGG | + | chr7_4:58698415-58698434 | Msa1166600:CDS | 45.0% | |
| CCCATTCAATGTGGGGATAT+AGG | - | chr7_4:58699906-58699925 | None:intergenic | 45.0% | |
| TCTTAGCCCCATTCAATGTG+GGG | - | chr7_4:58699913-58699932 | None:intergenic | 45.0% | |
| GTCTTAGCCCCATTCAATGT+GGG | - | chr7_4:58699914-58699933 | None:intergenic | 45.0% | |
| AGTCTTAGCCCCATTCAATG+TGG | - | chr7_4:58699915-58699934 | None:intergenic | 45.0% | |
| ACATTGAATGGGGCTAAGAC+TGG | + | chr7_4:58699914-58699933 | Msa1166600:CDS | 45.0% | |
| AAGGCTTTCGACGTTGATAC+CGG | + | chr7_4:58699947-58699966 | Msa1166600:CDS | 45.0% | |
| TCCAATATGCAGGTCTTGCA+TGG | + | chr7_4:58699981-58700000 | Msa1166600:CDS | 45.0% | |
| ACCATGCAAGACCTGCATAT+TGG | - | chr7_4:58699985-58700004 | None:intergenic | 45.0% | |
| CGAGATGAAATTTCACTGGG+TGG | - | chr7_4:58700136-58700155 | None:intergenic | 45.0% | |
| GAAATAGTAAGCTGGCTGGC+TGG | - | chr7_4:58696642-58696661 | None:intergenic | 50.0% | |
| TTCCACCAAGAATCGCACCT+TGG | - | chr7_4:58696813-58696832 | None:intergenic | 50.0% | |
| CTGGATCTGGAGGAGAATTG+GGG | - | chr7_4:58696932-58696951 | None:intergenic | 50.0% | |
| CCTGGATCTGGAGGAGAATT+GGG | - | chr7_4:58696933-58696952 | None:intergenic | 50.0% | |
| ACCTGGATCTGGAGGAGAAT+TGG | - | chr7_4:58696934-58696953 | None:intergenic | 50.0% | |
| GTTATGCAGAGTTACAGGGC+TGG | + | chr7_4:58697052-58697071 | Msa1166600:intron | 50.0% | |
| GCTTCTGTGTAGAGTGGTCA+TGG | + | chr7_4:58697222-58697241 | Msa1166600:intron | 50.0% | |
| GTGGTCATGGTCAATTGGCT+AGG | + | chr7_4:58697235-58697254 | Msa1166600:CDS | 50.0% | |
| GTAGCAGTTACTCTCCTCAC+TGG | - | chr7_4:58697465-58697484 | None:intergenic | 50.0% | |
| CTTTCCATGGACCTAAGCCT+AGG | + | chr7_4:58697700-58697719 | Msa1166600:intron | 50.0% | |
| AATGCCTAGGCTTAGGTCCA+TGG | - | chr7_4:58697707-58697726 | None:intergenic | 50.0% | |
| ! | GCTTATAGTGGGGTTGCTGT+TGG | + | chr7_4:58697803-58697822 | Msa1166600:intron | 50.0% |
| CTGGGCCAACTAAGAAGGAT+TGG | + | chr7_4:58697921-58697940 | Msa1166600:intron | 50.0% | |
| GAGCCACAAACAAGCAAGCA+AGG | - | chr7_4:58698182-58698201 | None:intergenic | 50.0% | |
| GACTCGGAATCCTTGGACTT+TGG | + | chr7_4:58698365-58698384 | Msa1166600:CDS | 50.0% | |
| GGAGTTGGAAGTTCAGGAGT+TGG | - | chr7_4:58698659-58698678 | None:intergenic | 50.0% | |
| CGTCTAGCTGAATTAGGCTC+AGG | + | chr7_4:58699542-58699561 | Msa1166600:intron | 50.0% | |
| CAGTGCTGTGGTGAAACTGA+TGG | - | chr7_4:58699721-58699740 | None:intergenic | 50.0% | |
| ACAAACGAGGAACAGTGCTG+TGG | - | chr7_4:58699733-58699752 | None:intergenic | 50.0% | |
| TCCCGTGGTAGCAAACACAT+TGG | + | chr7_4:58699859-58699878 | Msa1166600:CDS | 50.0% | |
| ! | CCCAATGTGTTTGCTACCAC+GGG | - | chr7_4:58699863-58699882 | None:intergenic | 50.0% |
| CCCGTGGTAGCAAACACATT+GGG | + | chr7_4:58699860-58699879 | Msa1166600:CDS | 50.0% | |
| ! | GCCCAATGTGTTTGCTACCA+CGG | - | chr7_4:58699864-58699883 | None:intergenic | 50.0% |
| TCTCGACGAGAATTCACCGA+AGG | + | chr7_4:58700151-58700170 | Msa1166600:three_prime_UTR | 50.0% | |
| CTGTGCCAAGGTGCGATTCT+TGG | + | chr7_4:58696805-58696824 | Msa1166600:CDS | 55.0% | |
| TGCCAAGGTGCGATTCTTGG+TGG | + | chr7_4:58696808-58696827 | Msa1166600:CDS | 55.0% | |
| CTGGAGGAGAATTGGGGTTC+CGG | - | chr7_4:58696926-58696945 | None:intergenic | 55.0% | |
| CCCAATTCTCCTCCAGATCC+AGG | + | chr7_4:58696930-58696949 | Msa1166600:CDS | 55.0% | |
| ACTGGTGGAGATGCAGGTCT+TGG | - | chr7_4:58697447-58697466 | None:intergenic | 55.0% | |
| GCAGTTACTCTCCTCACTGG+TGG | - | chr7_4:58697462-58697481 | None:intergenic | 55.0% | |
| TGCAGGTCTTGCATGGTCTG+TGG | + | chr7_4:58699988-58700007 | Msa1166600:CDS | 55.0% | |
| GACGAGAATTCACCGAAGGC+TGG | + | chr7_4:58700155-58700174 | Msa1166600:three_prime_UTR | 55.0% | |
| GACCTGCATCTCCACCAGTG+AGG | + | chr7_4:58697448-58697467 | Msa1166600:CDS | 60.0% | |
| CTCCTCACTGGTGGAGATGC+AGG | - | chr7_4:58697453-58697472 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 58696550 | 58700295 | 58696550 | ID=Msa1166600;Name=Msa1166600 |
| chr7_4 | mRNA | 58696550 | 58700295 | 58696550 | ID=Msa1166600-mRNA-1;Parent=Msa1166600;Name=Msa1166600-mRNA-1;_AED=0.32;_eAED=0.32;_QI=215|1|1|1|0.87|0.77|9|244|389 |
| chr7_4 | exon | 58696550 | 58696683 | 58696550 | ID=Msa1166600-mRNA-1:exon:18078;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58696709 | 58696951 | 58696709 | ID=Msa1166600-mRNA-1:exon:18079;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58697061 | 58697156 | 58697061 | ID=Msa1166600-mRNA-1:exon:18080;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58697234 | 58697308 | 58697234 | ID=Msa1166600-mRNA-1:exon:18081;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58697429 | 58697559 | 58697429 | ID=Msa1166600-mRNA-1:exon:18082;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58698110 | 58698213 | 58698110 | ID=Msa1166600-mRNA-1:exon:18083;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58698308 | 58698436 | 58698308 | ID=Msa1166600-mRNA-1:exon:18084;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58698609 | 58698724 | 58698609 | ID=Msa1166600-mRNA-1:exon:18085;Parent=Msa1166600-mRNA-1 |
| chr7_4 | exon | 58699695 | 58700295 | 58699695 | ID=Msa1166600-mRNA-1:exon:18086;Parent=Msa1166600-mRNA-1 |
| chr7_4 | five_prime_UTR | 58696550 | 58696683 | 58696550 | ID=Msa1166600-mRNA-1:five_prime_utr;Parent=Msa1166600-mRNA-1 |
| chr7_4 | five_prime_UTR | 58696709 | 58696789 | 58696709 | ID=Msa1166600-mRNA-1:five_prime_utr;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58696790 | 58696951 | 58696790 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58697061 | 58697156 | 58697061 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58697234 | 58697308 | 58697234 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58697429 | 58697559 | 58697429 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58698110 | 58698213 | 58698110 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58698308 | 58698436 | 58698308 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58698609 | 58698724 | 58698609 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | CDS | 58699695 | 58700051 | 58699695 | ID=Msa1166600-mRNA-1:cds;Parent=Msa1166600-mRNA-1 |
| chr7_4 | three_prime_UTR | 58700052 | 58700295 | 58700052 | ID=Msa1166600-mRNA-1:three_prime_utr;Parent=Msa1166600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
