Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082720 | XP_003626013.1 | 98.093 | 734 | 4 | 1 | 1 | 734 | 1 | 724 | 0.0 | 1476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082720 | sp|Q9M1P7|BOR2_ARATH | 81.241 | 709 | 111 | 6 | 1 | 707 | 1 | 689 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082720 | G7KTQ1 | 98.093 | 734 | 4 | 1 | 1 | 734 | 1 | 724 | 0.0 | 1476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046730 | Msa1082720 | 0.928781 | 1.774379e-92 | -8.615850e-47 |
| Msa0143450 | Msa1082720 | 0.975148 | 2.001355e-139 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082720 | MtrunA17_Chr7g0270341 | 98.093 | 734 | 4 | 1 | 1 | 734 | 1 | 724 | 0.0 | 1476 |
| Msa1082720 | MtrunA17_Chr3g0117521 | 73.315 | 712 | 163 | 8 | 1 | 708 | 1 | 689 | 0.0 | 1004 |
| Msa1082720 | MtrunA17_Chr2g0293661 | 73.463 | 667 | 164 | 3 | 1 | 667 | 1 | 654 | 0.0 | 997 |
| Msa1082720 | MtrunA17_Chr3g0138161 | 57.205 | 694 | 255 | 8 | 7 | 689 | 4 | 666 | 0.0 | 780 |
| Msa1082720 | MtrunA17_Chr2g0332471 | 58.383 | 668 | 249 | 8 | 1 | 660 | 5 | 651 | 0.0 | 773 |
| Msa1082720 | MtrunA17_Chr2g0332351 | 58.209 | 670 | 251 | 8 | 1 | 662 | 5 | 653 | 0.0 | 770 |
| Msa1082720 | MtrunA17_Chr2g0332331 | 58.060 | 670 | 252 | 8 | 1 | 662 | 5 | 653 | 0.0 | 769 |
| Msa1082720 | MtrunA17_Chr1g0148971 | 54.955 | 666 | 264 | 6 | 7 | 660 | 20 | 661 | 0.0 | 738 |
| Msa1082720 | MtrunA17_Chr2g0332441 | 59.241 | 606 | 221 | 6 | 42 | 641 | 2 | 587 | 0.0 | 721 |
| Msa1082720 | MtrunA17_Chr2g0332491 | 53.383 | 665 | 202 | 6 | 1 | 660 | 5 | 566 | 0.0 | 675 |
| Msa1082720 | MtrunA17_Chr2g0332391 | 55.163 | 368 | 142 | 5 | 175 | 539 | 1 | 348 | 2.08e-135 | 403 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082720 | AT3G62270.1 | 81.241 | 709 | 111 | 6 | 1 | 707 | 1 | 689 | 0.0 | 1162 |
| Msa1082720 | AT2G47160.1 | 79.614 | 726 | 120 | 8 | 1 | 725 | 1 | 699 | 0.0 | 1144 |
| Msa1082720 | AT2G47160.2 | 76.964 | 751 | 120 | 9 | 1 | 725 | 1 | 724 | 0.0 | 1132 |
| Msa1082720 | AT3G06450.3 | 71.277 | 658 | 171 | 5 | 3 | 659 | 5 | 645 | 0.0 | 974 |
| Msa1082720 | AT3G06450.1 | 71.277 | 658 | 171 | 5 | 3 | 659 | 5 | 645 | 0.0 | 974 |
| Msa1082720 | AT3G06450.2 | 71.277 | 658 | 171 | 5 | 3 | 659 | 5 | 645 | 0.0 | 974 |
| Msa1082720 | AT3G06450.4 | 71.277 | 658 | 171 | 5 | 3 | 659 | 5 | 645 | 0.0 | 974 |
| Msa1082720 | AT1G15460.2 | 59.138 | 673 | 253 | 7 | 8 | 673 | 13 | 670 | 0.0 | 817 |
| Msa1082720 | AT1G15460.1 | 59.138 | 673 | 253 | 7 | 8 | 673 | 13 | 670 | 0.0 | 817 |
| Msa1082720 | AT1G15460.3 | 61.551 | 619 | 223 | 4 | 8 | 625 | 13 | 617 | 0.0 | 800 |
| Msa1082720 | AT1G74810.7 | 56.287 | 668 | 270 | 5 | 1 | 660 | 1 | 654 | 0.0 | 783 |
| Msa1082720 | AT1G74810.4 | 56.287 | 668 | 270 | 5 | 1 | 660 | 1 | 654 | 0.0 | 783 |
| Msa1082720 | AT1G74810.1 | 56.287 | 668 | 270 | 5 | 1 | 660 | 1 | 654 | 0.0 | 783 |
| Msa1082720 | AT5G25430.1 | 55.523 | 679 | 269 | 10 | 7 | 674 | 9 | 665 | 0.0 | 759 |
| Msa1082720 | AT1G74810.6 | 56.916 | 629 | 254 | 4 | 35 | 660 | 8 | 622 | 0.0 | 745 |
| Msa1082720 | AT1G74810.3 | 56.916 | 629 | 254 | 4 | 35 | 660 | 8 | 622 | 0.0 | 745 |
| Msa1082720 | AT4G32510.1 | 53.275 | 687 | 279 | 7 | 1 | 668 | 1 | 664 | 0.0 | 738 |
| Msa1082720 | AT4G32510.2 | 52.865 | 698 | 286 | 8 | 1 | 678 | 1 | 675 | 0.0 | 737 |
| Msa1082720 | AT1G15460.4 | 56.995 | 579 | 227 | 7 | 102 | 673 | 1 | 564 | 0.0 | 668 |
| Msa1082720 | AT1G74810.5 | 54.804 | 562 | 237 | 4 | 102 | 660 | 1 | 548 | 0.0 | 639 |
| Msa1082720 | AT1G74810.2 | 54.095 | 525 | 224 | 4 | 139 | 660 | 1 | 511 | 0.0 | 580 |
Find 199 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCTTCATTTCCAGTTTA+TGG | 0.059987 | 7_2:+82850861 | Msa1082720:three_prime_UTR |
| TTGGGGCTACTTTGCCTTTA+TGG | 0.123064 | 7_2:+82849929 | Msa1082720:CDS |
| TCATTATGATTTGCTCCTTT+TGG | 0.138425 | 7_2:+82849165 | Msa1082720:CDS |
| TGTCTTTCCTTAACCTTCTT+TGG | 0.168286 | 7_2:+82847095 | Msa1082720:five_prime_UTR |
| ACATTATTGTGTGGCCTTAT+TGG | 0.170662 | 7_2:+82849290 | Msa1082720:CDS |
| TGATTCACTTTACAGGATTT+TGG | 0.172961 | 7_2:+82847387 | Msa1082720:intron |
| GTTCCTGTTGTGTTCATAAT+TGG | 0.189623 | 7_2:+82849034 | Msa1082720:CDS |
| AATAATGCTATTGTCTTAAA+AGG | 0.213365 | 7_2:-82850174 | None:intergenic |
| TTATTTCTTGTCTTGGTGTT+TGG | 0.236504 | 7_2:-82850798 | None:intergenic |
| ATTTATCTATTTATATGTTT+TGG | 0.242133 | 7_2:+82850213 | Msa1082720:CDS |
| TATTTCTTGTCTTGGTGTTT+GGG | 0.250913 | 7_2:-82850797 | None:intergenic |
| GCAAGCACATTGTTGTTATT+AGG | 0.266639 | 7_2:+82846831 | Msa1082720:five_prime_UTR |
| TGCTTTGATACTATTCTTAC+TGG | 0.270594 | 7_2:+82848198 | Msa1082720:CDS |
| ACCTGACAATCTCATTTCTT+TGG | 0.287431 | 7_2:-82850747 | None:intergenic |
| CTATTCTTACTGGCCATCTT+AGG | 0.291093 | 7_2:+82848208 | Msa1082720:CDS |
| CTTTCCCAAAACTGGTTTCC+AGG | 0.295534 | 7_2:-82849966 | None:intergenic |
| TTGTCTTGGTGTTTGGGATC+AGG | 0.296206 | 7_2:-82850791 | None:intergenic |
| TAAACTTTCAATTGCCATAA+AGG | 0.296865 | 7_2:-82849943 | None:intergenic |
| AATACCAACTTCAGTACTTT+GGG | 0.301075 | 7_2:+82849911 | Msa1082720:CDS |
| CATTCAAGCAGCTACAAGTA+TGG | 0.304452 | 7_2:+82849734 | Msa1082720:CDS |
| AAAGGATCCTTTCCCAAAAC+TGG | 0.307317 | 7_2:-82849974 | None:intergenic |
| AATCTCATTTCTTTGGTCAT+TGG | 0.313846 | 7_2:-82850740 | None:intergenic |
| TTCGCTTTGGTCCTTTCATT+TGG | 0.315725 | 7_2:+82848556 | Msa1082720:CDS |
| GTTTACCTGGAAACCAGTTT+TGG | 0.316421 | 7_2:+82849961 | Msa1082720:CDS |
| GCGCCGGGCGACCACGGATT+TGG | 0.326784 | 7_2:-82848863 | None:intergenic |
| GTCTTAATTATTTCTTGTCT+TGG | 0.335456 | 7_2:-82850805 | None:intergenic |
| GGAGTGGAGCTATTGATCTT+TGG | 0.338665 | 7_2:-82850602 | None:intergenic |
| GCAATACCTGTCATTTCATT+TGG | 0.339007 | 7_2:+82847439 | Msa1082720:CDS |
| CGACTATGGTGTGCCACTTA+TGG | 0.341912 | 7_2:+82848766 | Msa1082720:CDS |
| GATTTCGTATCTTCTCTCTT+TGG | 0.344196 | 7_2:-82848493 | None:intergenic |
| CTTCGTGGAGGTTTGCTAAT+GGG | 0.346782 | 7_2:+82848530 | Msa1082720:CDS |
| AAAACATATAAATAGATAAA+TGG | 0.347506 | 7_2:-82850211 | None:intergenic |
| CGTTGTTCCTTTACCTCAAC+AGG | 0.355491 | 7_2:-82849822 | None:intergenic |
| GATTAACAGCAATCTGAGTT+TGG | 0.355558 | 7_2:+82850491 | Msa1082720:intron |
| CAAGAAGCCGTGGTGAATTT+AGG | 0.358792 | 7_2:+82850564 | Msa1082720:CDS |
| CCTTCGTGGAGGTTTGCTAA+TGG | 0.359784 | 7_2:+82848529 | Msa1082720:CDS |
| AACCGCTTTACCCGAATTGC+GGG | 0.360056 | 7_2:+82848247 | Msa1082720:CDS |
| TTGGGTAGAAACCTGTTTCT+TGG | 0.364718 | 7_2:+82847770 | Msa1082720:CDS |
| GCTAGTTTAGGACAGTTATA+TGG | 0.368479 | 7_2:+82849521 | Msa1082720:CDS |
| TGCCACTTATGGTCCTAGTT+TGG | 0.369045 | 7_2:+82848777 | Msa1082720:CDS |
| TGCGGTATGACTCCGTTTGC+AGG | 0.370416 | 7_2:-82849320 | None:intergenic |
| CGCCCGGCGCCTATGACAAT+TGG | 0.370935 | 7_2:+82848876 | Msa1082720:CDS |
| CAAACAACTCTCCCGCAATT+CGG | 0.374938 | 7_2:-82848258 | None:intergenic |
| CGAATTGCGGGAGAGTTGTT+TGG | 0.375063 | 7_2:+82848259 | Msa1082720:CDS |
| TTCTTTGGTCATTGGACTGT+TGG | 0.381083 | 7_2:-82850732 | None:intergenic |
| GGGAGAAAGTATTGTCTTAG+TGG | 0.386465 | 7_2:-82850294 | None:intergenic |
| TTAGGATCATTTCTTGGTGT+TGG | 0.387898 | 7_2:-82850623 | None:intergenic |
| AAATACCAACTTCAGTACTT+TGG | 0.388661 | 7_2:+82849910 | Msa1082720:CDS |
| TGCTAATGGGATGTTCGCTT+TGG | 0.391611 | 7_2:+82848543 | Msa1082720:CDS |
| TTGCAGGAGGAATTCCAATA+AGG | 0.392276 | 7_2:-82849304 | None:intergenic |
| TTCATTATCCTATATACAAC+AGG | 0.398618 | 7_2:+82850928 | Msa1082720:three_prime_UTR |
| TTTCCCACCAAAGAAGGTTA+AGG | 0.399439 | 7_2:-82847102 | None:intergenic |
| GCACACCATAGTCGGCTATA+AGG | 0.404541 | 7_2:-82848757 | None:intergenic |
| ATCAGTAAGAATGCTAGTTT+AGG | 0.405750 | 7_2:+82849509 | Msa1082720:CDS |
| CATACTTGTAGCTGCTTGAA+TGG | 0.407531 | 7_2:-82849733 | None:intergenic |
| CAGCTGCATCCAAGTCTTGA+AGG | 0.411041 | 7_2:-82850338 | None:intergenic |
| TGCTAAAGAAAGACCTGAGT+TGG | 0.415592 | 7_2:+82847751 | Msa1082720:CDS |
| TGACAATTGGACTGTTGTTA+AGG | 0.418583 | 7_2:+82848889 | Msa1082720:CDS |
| ATATAAATAGATAAATGGTT+TGG | 0.420632 | 7_2:-82850206 | None:intergenic |
| AACCTGTTTCTTGGATGGGC+TGG | 0.422896 | 7_2:+82847779 | Msa1082720:CDS |
| AGGCGCCTTGGGATACCGTT+TGG | 0.423298 | 7_2:-82848833 | None:intergenic |
| AAAATTAAAGAACCATAAAC+TGG | 0.426033 | 7_2:-82850873 | None:intergenic |
| CTTTCCTTAACCTTCTTTGG+TGG | 0.427045 | 7_2:+82847098 | Msa1082720:five_prime_UTR |
| TGTCTTGGTGTTTGGGATCA+GGG | 0.427048 | 7_2:-82850790 | None:intergenic |
| TTGGACTAAAGAGGCGCCTT+GGG | 0.427252 | 7_2:-82848844 | None:intergenic |
| GAGTTTATATAACAATTGTA+TGG | 0.427377 | 7_2:+82851111 | Msa1082720:three_prime_UTR |
| ACCAAAGAAATGAGATTGTC+AGG | 0.428973 | 7_2:+82850746 | Msa1082720:CDS |
| TACATACACCTGTTGTATAT+AGG | 0.431011 | 7_2:-82850936 | None:intergenic |
| ACACTTTGTTGTGATTTGTT+TGG | 0.434386 | 7_2:+82847065 | Msa1082720:five_prime_UTR |
| CTAACTTGGGTACCTATTGC+TGG | 0.436565 | 7_2:+82850237 | Msa1082720:CDS |
| AGCACTGCAATCATAGTTGC+TGG | 0.439606 | 7_2:-82849067 | None:intergenic |
| GGAAACATGACTCCAGCAAT+AGG | 0.440092 | 7_2:-82850249 | None:intergenic |
| TCGGTGCTGTGAAAAGTAAA+AGG | 0.440388 | 7_2:-82849992 | None:intergenic |
| AAACAACTCTCCCGCAATTC+GGG | 0.442782 | 7_2:-82848257 | None:intergenic |
| CTTGCTTCCTGTTGAGGTAA+AGG | 0.444141 | 7_2:+82849815 | Msa1082720:CDS |
| AGTCCTCGGTCTGGCGTAAG+AGG | 0.444825 | 7_2:+82850707 | Msa1082720:CDS |
| TAACTTGCTTCAATCAGTAT+TGG | 0.448829 | 7_2:+82849851 | Msa1082720:CDS |
| GTAGAAACCTGTTTCTTGGA+TGG | 0.449097 | 7_2:+82847774 | Msa1082720:CDS |
| GAACAACTAGAGAGAAATAC+TGG | 0.450622 | 7_2:+82847463 | Msa1082720:CDS |
| ATCCAGCCCATCCAAGAAAC+AGG | 0.452822 | 7_2:-82847781 | None:intergenic |
| TAATGTGCTACAAGCAAGAT+TGG | 0.456259 | 7_2:+82847194 | Msa1082720:CDS |
| CTTCAATCAGTATTGGTTGG+AGG | 0.463638 | 7_2:+82849858 | Msa1082720:CDS |
| GGAGCTGGTGCTTCTCATAT+CGG | 0.465563 | 7_2:+82850512 | Msa1082720:CDS |
| AAGGCTAGATCATGGCGTTA+TGG | 0.470484 | 7_2:+82848607 | Msa1082720:CDS |
| ATGGCAATTGAAAGTTTACC+TGG | 0.470571 | 7_2:+82849948 | Msa1082720:CDS |
| TTTCCTTAACCTTCTTTGGT+GGG | 0.471292 | 7_2:+82847099 | Msa1082720:five_prime_UTR |
| GCTCCAATTATGAACACAAC+AGG | 0.475392 | 7_2:-82849037 | None:intergenic |
| ATCATTTCTTGGTGTTGGAG+TGG | 0.476671 | 7_2:-82850618 | None:intergenic |
| CTTGGATGCAGCTGAGTATG+AGG | 0.477776 | 7_2:+82850347 | Msa1082720:CDS |
| TTTGGACTAAAGAGGCGCCT+TGG | 0.478346 | 7_2:-82848845 | None:intergenic |
| TCTAGCAACTCTTAAACATC+AGG | 0.479084 | 7_2:+82849364 | Msa1082720:CDS |
| GGCATTATACACTCAATCAT+TGG | 0.482191 | 7_2:+82847659 | Msa1082720:CDS |
| AGTCCAAATCCGTGGTCGCC+CGG | 0.483928 | 7_2:+82848860 | Msa1082720:CDS |
| ATTTACTTGTATCTTCTGCT+CGG | 0.484482 | 7_2:-82850011 | None:intergenic |
| TTGCTTCAATCAGTATTGGT+TGG | 0.485493 | 7_2:+82849855 | Msa1082720:CDS |
| CGTAGCCTTATAGCCGACTA+TGG | 0.485953 | 7_2:+82848752 | Msa1082720:CDS |
| TTTGTGTCTTAGAATGATGT+AGG | 0.486124 | 7_2:+82850828 | Msa1082720:three_prime_UTR |
| TAAGAGGTGTCTGCATTTGA+TGG | 0.489462 | 7_2:-82849562 | None:intergenic |
| TAGAAACCTGTTTCTTGGAT+GGG | 0.489881 | 7_2:+82847775 | Msa1082720:CDS |
| TCGGGTAAAGCGGTTGATGA+TGG | 0.490490 | 7_2:-82848239 | None:intergenic |
| AGATGACTTGCTTCCTGTTG+AGG | 0.490643 | 7_2:+82849809 | Msa1082720:CDS |
| GTCCTTGTGCCAGGGACTTG+TGG | 0.493396 | 7_2:+82848456 | Msa1082720:intron |
| ATTGGAATTCCTCCTGCAAA+CGG | 0.495864 | 7_2:+82849308 | Msa1082720:CDS |
| GTGGAATCAAAGCAGGTGTA+AGG | 0.505469 | 7_2:+82847221 | Msa1082720:CDS |
| GCTAAAGAAAGACCTGAGTT+GGG | 0.505588 | 7_2:+82847752 | Msa1082720:CDS |
| AGATCATGGCGTTATGGTAG+TGG | 0.507525 | 7_2:+82848613 | Msa1082720:CDS |
| CTTATGGTCCTAGTTTGGAC+AGG | 0.509478 | 7_2:+82848782 | Msa1082720:CDS |
| GAGAATTAAAAGAGAGGTGC+GGG | 0.510378 | 7_2:-82850658 | None:intergenic |
| AGAAATGAGATTGTCAGGTA+GGG | 0.510643 | 7_2:+82850751 | Msa1082720:CDS |
| AACAACAGTCCAATTGTCAT+AGG | 0.516200 | 7_2:-82848885 | None:intergenic |
| AAGAGAGGTGCGGGCTCAGA+CGG | 0.517099 | 7_2:-82850649 | None:intergenic |
| CAGCAATCTGAGTTTGGAGC+TGG | 0.517149 | 7_2:+82850497 | Msa1082720:intron |
| AAGAAATGAGATTGTCAGGT+AGG | 0.518072 | 7_2:+82850750 | Msa1082720:CDS |
| AGTCCAATTGTCATAGGCGC+CGG | 0.518211 | 7_2:-82848879 | None:intergenic |
| GATCGACTTACTCGAGCAGA+TGG | 0.522727 | 7_2:-82849596 | None:intergenic |
| AGGACACACCTGTCCAAACT+AGG | 0.523221 | 7_2:-82848790 | None:intergenic |
| TAGCCCCAAAGTACTGAAGT+TGG | 0.525039 | 7_2:-82849915 | None:intergenic |
| GATGGGTCCTGGTAAATAAG+AGG | 0.526245 | 7_2:-82849578 | None:intergenic |
| TTACTCGAGCAGATGGGTCC+TGG | 0.527068 | 7_2:-82849589 | None:intergenic |
| TCAAATATAGTCTCATCGAC+CGG | 0.529909 | 7_2:-82849771 | None:intergenic |
| TATGGGAAACGTGGACGCCC+CGG | 0.531213 | 7_2:+82849752 | Msa1082720:CDS |
| ACTGAGCAAAGTCCTCGGTC+TGG | 0.531263 | 7_2:+82850698 | Msa1082720:CDS |
| GTCCAATTGTCATAGGCGCC+GGG | 0.533568 | 7_2:-82848878 | None:intergenic |
| ACATATTGAAGTTGATGCCA+AGG | 0.539736 | 7_2:-82847636 | None:intergenic |
| GCAAATAGCATTAATAGTGC+AGG | 0.540556 | 7_2:-82846937 | None:intergenic |
| CAAATATAGTCTCATCGACC+GGG | 0.540975 | 7_2:-82849770 | None:intergenic |
| GCTAGACTCTTTGTATGCAT+CGG | 0.543376 | 7_2:-82849347 | None:intergenic |
| GCCACTCCTAAAATCAGTAA+AGG | 0.544686 | 7_2:-82847689 | None:intergenic |
| TGTTTGGGATCAGGGTTGAG+AGG | 0.546974 | 7_2:-82850782 | None:intergenic |
| TCTGACAGCTGTTCAAACCT+TGG | 0.548609 | 7_2:+82847619 | Msa1082720:CDS |
| TTATTAGGAACCACTTGAGA+AGG | 0.549474 | 7_2:+82846846 | Msa1082720:five_prime_UTR |
| ATGTGAGGATGAATTAATCA+AGG | 0.549636 | 7_2:-82846964 | None:intergenic |
| TGTTCACCAAATGAAATGAC+AGG | 0.550764 | 7_2:-82847445 | None:intergenic |
| TAACAGTTACAATTTGACAT+AGG | 0.550891 | 7_2:-82850977 | None:intergenic |
| AAATCATAATGATAAGAAGA+TGG | 0.551493 | 7_2:-82849154 | None:intergenic |
| TCATTCTTGATACCTTCAAA+AGG | 0.552421 | 7_2:-82847157 | None:intergenic |
| AAGTAGGATTGAAGAATGTG+AGG | 0.554415 | 7_2:-82846979 | None:intergenic |
| GCAGGTTGGCTTCAAAGACA+TGG | 0.559142 | 7_2:-82846919 | None:intergenic |
| ATGCCAGCTGTATCAAAAGC+AGG | 0.559487 | 7_2:-82846875 | None:intergenic |
| GTCCAAACTAGGACCATAAG+TGG | 0.562627 | 7_2:-82848779 | None:intergenic |
| ATTCAAGCAGCTACAAGTAT+GGG | 0.564842 | 7_2:+82849735 | Msa1082720:CDS |
| TGCTACAAGCAAGATTGGAC+AGG | 0.567931 | 7_2:+82847199 | Msa1082720:CDS |
| GTGTCTTAGAATGATGTAGG+AGG | 0.569957 | 7_2:+82850831 | Msa1082720:three_prime_UTR |
| GGTATCAAGAATGATCTAAG+AGG | 0.570702 | 7_2:+82847166 | Msa1082720:CDS |
| AGGTGCACACCTTCAAGACT+TGG | 0.572324 | 7_2:+82850329 | Msa1082720:CDS |
| TGGACAGGTGGAATCAAAGC+AGG | 0.574832 | 7_2:+82847214 | Msa1082720:CDS |
| GAAATGAGATTGTCAGGTAG+GGG | 0.575756 | 7_2:+82850752 | Msa1082720:CDS |
| TAAGGAGAAGGCCAAATGAA+AGG | 0.576331 | 7_2:-82848567 | None:intergenic |
| CAATATATCTTACCGATGCA+AGG | 0.577470 | 7_2:-82850392 | None:intergenic |
| CAACCGCTTTACCCGAATTG+CGG | 0.578492 | 7_2:+82848246 | Msa1082720:CDS |
| GATGGAACATGCTCCTAAGA+TGG | 0.580149 | 7_2:-82848221 | None:intergenic |
| ACTAAGAGCATGATCATCAA+AGG | 0.581858 | 7_2:-82850270 | None:intergenic |
| TGTTTCTTGGATGGGCTGGA+TGG | 0.584884 | 7_2:+82847783 | Msa1082720:CDS |
| AAAGCAGAAAGGCTAGATCA+TGG | 0.585011 | 7_2:+82848599 | Msa1082720:CDS |
| TTGGCATCAACTTCAATATG+TGG | 0.585839 | 7_2:+82847638 | Msa1082720:CDS |
| TGCTGGAAGACATTATTGTG+TGG | 0.586710 | 7_2:+82849281 | Msa1082720:intron |
| CATAAGTGGCACACCATAGT+CGG | 0.587251 | 7_2:-82848765 | None:intergenic |
| GCAGACACCTCTTATTTACC+AGG | 0.589449 | 7_2:+82849571 | Msa1082720:CDS |
| ACCACGGATTTGGACTAAAG+AGG | 0.593964 | 7_2:-82848853 | None:intergenic |
| TTTACCGTTCAACCTTGCAT+CGG | 0.594284 | 7_2:+82850380 | Msa1082720:CDS |
| AACAGGTTTCTACCCAACTC+AGG | 0.597836 | 7_2:-82847764 | None:intergenic |
| CACAAACAAACTGAGGAAGT+AGG | 0.599980 | 7_2:-82846995 | None:intergenic |
| TCATAGGCGCCGGGCGACCA+CGG | 0.600175 | 7_2:-82848869 | None:intergenic |
| CTCCCGCAATTCGGGTAAAG+CGG | 0.606782 | 7_2:-82848249 | None:intergenic |
| CTTACCGATGCAAGGTTGAA+CGG | 0.608240 | 7_2:-82850384 | None:intergenic |
| TCGCGACTGAGCAAAGTCCT+CGG | 0.608512 | 7_2:+82850693 | Msa1082720:CDS |
| GGTGCTTCTCATATCGGAGA+AGG | 0.609058 | 7_2:+82850518 | Msa1082720:CDS |
| AGTATACTGTATAATGACAC+TGG | 0.615417 | 7_2:-82846734 | None:intergenic |
| CAGGTTGTGACCTTCTCAAG+TGG | 0.616469 | 7_2:-82846856 | None:intergenic |
| ATACCAACTTCAGTACTTTG+GGG | 0.618229 | 7_2:+82849912 | Msa1082720:CDS |
| CCGTTTGGAACACTTGCAGT+CGG | 0.622641 | 7_2:-82848818 | None:intergenic |
| TCAAGAATGATCTAAGAGGA+AGG | 0.623945 | 7_2:+82847170 | Msa1082720:CDS |
| CCGACTGCAAGTGTTCCAAA+CGG | 0.624889 | 7_2:+82848818 | Msa1082720:CDS |
| GTGTTCCAAACGGTATCCCA+AGG | 0.628714 | 7_2:+82848828 | Msa1082720:CDS |
| AATGTGTACATGATCACAGT+AGG | 0.629188 | 7_2:-82847716 | None:intergenic |
| CAGGTTGGCTTCAAAGACAT+GGG | 0.630155 | 7_2:-82846918 | None:intergenic |
| CTTACTGATACTGTTTCGAG+CGG | 0.639834 | 7_2:-82849495 | None:intergenic |
| GAAGTCATCACAAGAAGCCG+TGG | 0.640480 | 7_2:+82850554 | Msa1082720:CDS |
| ATTATACACTCAATCATTGG+TGG | 0.645714 | 7_2:+82847662 | Msa1082720:CDS |
| CGAGAATTAAAAGAGAGGTG+CGG | 0.646333 | 7_2:-82850659 | None:intergenic |
| GTGACAAATGATTAGGCACA+AGG | 0.648110 | 7_2:+82849687 | Msa1082720:intron |
| TACAAGCAAGATTGGACAGG+TGG | 0.649360 | 7_2:+82847202 | Msa1082720:CDS |
| ATCGACTTACTCGAGCAGAT+GGG | 0.649721 | 7_2:-82849595 | None:intergenic |
| CTGTTTCAACAAAAGTAGCA+TGG | 0.650562 | 7_2:-82850149 | None:intergenic |
| GCCTCTTTAGTCCAAATCCG+TGG | 0.651698 | 7_2:+82848852 | Msa1082720:CDS |
| ATAGCATTAATAGTGCAGGT+TGG | 0.651948 | 7_2:-82846933 | None:intergenic |
| AACACTTGCAGTCGGCATGT+AGG | 0.670569 | 7_2:-82848810 | None:intergenic |
| TTTGTATGCATCGGAGACTG+CGG | 0.679679 | 7_2:-82849338 | None:intergenic |
| AAATATAGTCTCATCGACCG+GGG | 0.685107 | 7_2:-82849769 | None:intergenic |
| GGTATGACTCCGTTTGCAGG+AGG | 0.685848 | 7_2:-82849317 | None:intergenic |
| AGCTACAAGTATGGGAAACG+TGG | 0.688327 | 7_2:+82849743 | Msa1082720:CDS |
| GTTTAATCACAAACAAACTG+AGG | 0.691326 | 7_2:-82847002 | None:intergenic |
| GTGCCTCTTACGCCAGACCG+AGG | 0.694511 | 7_2:-82850710 | None:intergenic |
| TAGTATGCCTAAATTCACCA+CGG | 0.697327 | 7_2:-82850571 | None:intergenic |
| CCACACGAGAATTAAAAGAG+AGG | 0.699754 | 7_2:-82850664 | None:intergenic |
| TTATTACTTTGACCACAGTG+TGG | 0.712922 | 7_2:+82849090 | Msa1082720:CDS |
| TGAGGATGAATTAATCAAGG+AGG | 0.723030 | 7_2:-82846961 | None:intergenic |
| CCATTAGCAAACCTCCACGA+AGG | 0.724265 | 7_2:-82848529 | None:intergenic |
| AAAGCTGAGATGCCACACTG+TGG | 0.814882 | 7_2:-82849102 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTATAAGTATATTATTT+TGG | + | chr7_2:82847509-82847528 | Msa1082720:intron | 10.0% |
| !! | AAAACATATAAATAGATAAA+TGG | - | chr7_2:82850214-82850233 | None:intergenic | 10.0% |
| !!! | ATTTATCTATTTATATGTTT+TGG | + | chr7_2:82850213-82850232 | Msa1082720:CDS | 10.0% |
| !! | TTAAAAAAAGAAAGAAACAA+AGG | - | chr7_2:82846796-82846815 | None:intergenic | 15.0% |
| !!! | TTTTGATTTATATATCAACA+AGG | - | chr7_2:82847027-82847046 | None:intergenic | 15.0% |
| !! | TATGAAAGTTATATTTCAAT+TGG | - | chr7_2:82847360-82847379 | None:intergenic | 15.0% |
| !!! | ACTTAATTATGTTTTGTTAT+TGG | + | chr7_2:82847887-82847906 | Msa1082720:intron | 15.0% |
| !!! | ATTATTAACTTGATTTTGTA+GGG | + | chr7_2:82848162-82848181 | Msa1082720:intron | 15.0% |
| !!! | ATTTATTTAACTTTAACTAC+AGG | + | chr7_2:82848722-82848741 | Msa1082720:intron | 15.0% |
| !! | AACATTGTTTATTAAAAAGA+TGG | + | chr7_2:82848943-82848962 | Msa1082720:intron | 15.0% |
| !!! | AATAAATTTTAAGAAGGTTT+AGG | - | chr7_2:82849621-82849640 | None:intergenic | 15.0% |
| !!! | CAAGAAAATAAATTTTAAGA+AGG | - | chr7_2:82849627-82849646 | None:intergenic | 15.0% |
| !!! | AAATTTTCTTTTAATGTGTA+GGG | + | chr7_2:82850113-82850132 | Msa1082720:intron | 15.0% |
| !! | ATATAAATAGATAAATGGTT+TGG | - | chr7_2:82850209-82850228 | None:intergenic | 15.0% |
| !!! | TTTGGAATATGTTTTCATAA+AGG | + | chr7_2:82847527-82847546 | Msa1082720:intron | 20.0% |
| !!! | ATATGTTTTCATAAAGGAAA+AGG | + | chr7_2:82847533-82847552 | Msa1082720:intron | 20.0% |
| !!! | AATTAAGTTGTTTATCCAAA+CGG | - | chr7_2:82847875-82847894 | None:intergenic | 20.0% |
| !! | TCAAGTTAATAATGAAAACA+AGG | - | chr7_2:82848155-82848174 | None:intergenic | 20.0% |
| !!! | CATTATTAACTTGATTTTGT+AGG | + | chr7_2:82848161-82848180 | Msa1082720:intron | 20.0% |
| !! | ATAAATATGATAAATGACCA+AGG | - | chr7_2:82848347-82848366 | None:intergenic | 20.0% |
| !!! | AATATGTTGGTAAATAACTT+CGG | - | chr7_2:82848433-82848452 | None:intergenic | 20.0% |
| !! | TTTAATAAACAATGTTACAG+TGG | - | chr7_2:82848939-82848958 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTTCTGAAC+AGG | + | chr7_2:82849000-82849019 | Msa1082720:intron | 20.0% |
| !! | AAATCATAATGATAAGAAGA+TGG | - | chr7_2:82849157-82849176 | None:intergenic | 20.0% |
| !!! | TTGCTTAATTCTTTTTCTAA+TGG | + | chr7_2:82849242-82849261 | Msa1082720:intron | 20.0% |
| !!! | CAAATTTTCTTTTAATGTGT+AGG | + | chr7_2:82850112-82850131 | Msa1082720:intron | 20.0% |
| !! | AATAATGCTATTGTCTTAAA+AGG | - | chr7_2:82850177-82850196 | None:intergenic | 20.0% |
| !! | AAAATTAAAGAACCATAAAC+TGG | - | chr7_2:82850876-82850895 | None:intergenic | 20.0% |
| !! | GAGTTTATATAACAATTGTA+TGG | + | chr7_2:82851111-82851130 | Msa1082720:three_prime_UTR | 20.0% |
| ! | AAATGAAGGTAGATTTGATT+TGG | - | chr7_2:82846761-82846780 | None:intergenic | 25.0% |
| ! | GGAAATGAATAATGAAATGA+AGG | - | chr7_2:82846775-82846794 | None:intergenic | 25.0% |
| ! | GGAAAAAGAAAAAAACACTA+TGG | + | chr7_2:82847120-82847139 | Msa1082720:exon | 25.0% |
| !!! | AATGTTTTGATTCACTTTAC+AGG | + | chr7_2:82847380-82847399 | Msa1082720:intron | 25.0% |
| ! | AAAAAATATGTATGTTGTGG+GGG | - | chr7_2:82847413-82847432 | None:intergenic | 25.0% |
| ! | CAAAAAATATGTATGTTGTG+GGG | - | chr7_2:82847414-82847433 | None:intergenic | 25.0% |
| ! | GCAAAAAATATGTATGTTGT+GGG | - | chr7_2:82847415-82847434 | None:intergenic | 25.0% |
| ! | AGCAAAAAATATGTATGTTG+TGG | - | chr7_2:82847416-82847435 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+GGG | - | chr7_2:82847874-82847893 | None:intergenic | 25.0% |
| !! | ACTTCTTTTATAAGCTATCA+TGG | + | chr7_2:82847970-82847989 | Msa1082720:intron | 25.0% |
| !! | CTTCTTTTATAAGCTATCAT+GGG | + | chr7_2:82847971-82847990 | Msa1082720:intron | 25.0% |
| !!! | AAATAAGGACATGTTTTGAT+TGG | - | chr7_2:82848094-82848113 | None:intergenic | 25.0% |
| ! | TAATAATGAAAACAAGGCAA+TGG | - | chr7_2:82848149-82848168 | None:intergenic | 25.0% |
| ! | ACAATTATCAAAGTTTACCT+TGG | + | chr7_2:82848327-82848346 | Msa1082720:intron | 25.0% |
| ! | ATTTATCTATCTATCAACGA+AGG | + | chr7_2:82848378-82848397 | Msa1082720:intron | 25.0% |
| !! | ATTTAACTTTAACTACAGGT+TGG | + | chr7_2:82848726-82848745 | Msa1082720:intron | 25.0% |
| ! | AGAAAAAGAATTAAGCAAGT+TGG | - | chr7_2:82849240-82849259 | None:intergenic | 25.0% |
| ! | AATATGTGTCTGACTAAAAA+AGG | + | chr7_2:82849428-82849447 | Msa1082720:intron | 25.0% |
| ! | GTTTAATATATGACATGTGT+TGG | + | chr7_2:82849660-82849679 | Msa1082720:intron | 25.0% |
| ! | TAAACTTTCAATTGCCATAA+AGG | - | chr7_2:82849946-82849965 | None:intergenic | 25.0% |
| !!! | TTATATGTTTTGGACTAACT+TGG | + | chr7_2:82850223-82850242 | Msa1082720:CDS | 25.0% |
| !!! | TATATGTTTTGGACTAACTT+GGG | + | chr7_2:82850224-82850243 | Msa1082720:CDS | 25.0% |
| !! | GTCTTAATTATTTCTTGTCT+TGG | - | chr7_2:82850808-82850827 | None:intergenic | 25.0% |
| !!! | TATGGTTCTTTAATTTTGCT+TGG | + | chr7_2:82850879-82850898 | Msa1082720:three_prime_UTR | 25.0% |
| ! | TTCATTATCCTATATACAAC+AGG | + | chr7_2:82850928-82850947 | Msa1082720:three_prime_UTR | 25.0% |
| ! | TAACAGTTACAATTTGACAT+AGG | - | chr7_2:82850980-82850999 | None:intergenic | 25.0% |
| AGTATACTGTATAATGACAC+TGG | - | chr7_2:82846737-82846756 | None:intergenic | 30.0% | |
| ATGTGAGGATGAATTAATCA+AGG | - | chr7_2:82846967-82846986 | None:intergenic | 30.0% | |
| GTTTAATCACAAACAAACTG+AGG | - | chr7_2:82847005-82847024 | None:intergenic | 30.0% | |
| !! | ACACTTTGTTGTGATTTGTT+TGG | + | chr7_2:82847065-82847084 | Msa1082720:five_prime_UTR | 30.0% |
| ! | GAAACATTTGTACCTTTTGA+AGG | + | chr7_2:82847145-82847164 | Msa1082720:CDS | 30.0% |
| TCATTCTTGATACCTTCAAA+AGG | - | chr7_2:82847160-82847179 | None:intergenic | 30.0% | |
| ! | TGATTCACTTTACAGGATTT+TGG | + | chr7_2:82847387-82847406 | Msa1082720:intron | 30.0% |
| ATTATACACTCAATCATTGG+TGG | + | chr7_2:82847662-82847681 | Msa1082720:CDS | 30.0% | |
| ! | AATAAGTTGAGAACAGCTTA+TGG | + | chr7_2:82848005-82848024 | Msa1082720:intron | 30.0% |
| TTATCTACTGATATAAGCAC+TGG | - | chr7_2:82848060-82848079 | None:intergenic | 30.0% | |
| ACAGCACTAGAACATAAATA+AGG | - | chr7_2:82848109-82848128 | None:intergenic | 30.0% | |
| TGCTTTGATACTATTCTTAC+TGG | + | chr7_2:82848198-82848217 | Msa1082720:CDS | 30.0% | |
| ! | TTTTTAATGCAGTAAGGAGA+AGG | - | chr7_2:82848582-82848601 | None:intergenic | 30.0% |
| !!! | TTCTGCTTTTTAATGCAGTA+AGG | - | chr7_2:82848588-82848607 | None:intergenic | 30.0% |
| TACTGCATTAAAAAGCAGAA+AGG | + | chr7_2:82848588-82848607 | Msa1082720:CDS | 30.0% | |
| CAAATGATTACAAACAGTGA+CGG | - | chr7_2:82848686-82848705 | None:intergenic | 30.0% | |
| ! | TTTTCTTTCTGAACAGGATA+TGG | + | chr7_2:82849006-82849025 | Msa1082720:intron | 30.0% |
| !!! | TCATTATGATTTGCTCCTTT+TGG | + | chr7_2:82849165-82849184 | Msa1082720:CDS | 30.0% |
| !!! | CATTATGATTTGCTCCTTTT+GGG | + | chr7_2:82849166-82849185 | Msa1082720:CDS | 30.0% |
| AGTTGGAAGTTTAATGAACT+AGG | - | chr7_2:82849223-82849242 | None:intergenic | 30.0% | |
| GTATAATTCATGTTTCTTGC+TGG | + | chr7_2:82849264-82849283 | Msa1082720:intron | 30.0% | |
| ! | ATCAGTAAGAATGCTAGTTT+AGG | + | chr7_2:82849509-82849528 | Msa1082720:CDS | 30.0% |
| TGGTATTGTGACAAATGATT+AGG | + | chr7_2:82849680-82849699 | Msa1082720:intron | 30.0% | |
| !! | TAACTTGCTTCAATCAGTAT+TGG | + | chr7_2:82849851-82849870 | Msa1082720:CDS | 30.0% |
| ! | TATTTTCTTGAGAATAGGCA+TGG | - | chr7_2:82849895-82849914 | None:intergenic | 30.0% |
| ! | GTTGGTATTTTCTTGAGAAT+AGG | - | chr7_2:82849900-82849919 | None:intergenic | 30.0% |
| AAATACCAACTTCAGTACTT+TGG | + | chr7_2:82849910-82849929 | Msa1082720:CDS | 30.0% | |
| AATACCAACTTCAGTACTTT+GGG | + | chr7_2:82849911-82849930 | Msa1082720:CDS | 30.0% | |
| ATTTACTTGTATCTTCTGCT+CGG | - | chr7_2:82850014-82850033 | None:intergenic | 30.0% | |
| !! | TTTCTCCCCAAATTTTTCAA+AGG | + | chr7_2:82850309-82850328 | Msa1082720:CDS | 30.0% |
| ! | TGTGCACCTTTGAAAAATTT+GGG | - | chr7_2:82850318-82850337 | None:intergenic | 30.0% |
| AATCTCATTTCTTTGGTCAT+TGG | - | chr7_2:82850743-82850762 | None:intergenic | 30.0% | |
| !! | TATTTCTTGTCTTGGTGTTT+GGG | - | chr7_2:82850800-82850819 | None:intergenic | 30.0% |
| !! | TTATTTCTTGTCTTGGTGTT+TGG | - | chr7_2:82850801-82850820 | None:intergenic | 30.0% |
| TTTGTGTCTTAGAATGATGT+AGG | + | chr7_2:82850828-82850847 | Msa1082720:three_prime_UTR | 30.0% | |
| TACATACACCTGTTGTATAT+AGG | - | chr7_2:82850939-82850958 | None:intergenic | 30.0% | |
| GGTGTATGTAACCAAAAATA+TGG | + | chr7_2:82850949-82850968 | Msa1082720:three_prime_UTR | 30.0% | |
| ! | GCAAGCACATTGTTGTTATT+AGG | + | chr7_2:82846831-82846850 | Msa1082720:five_prime_UTR | 35.0% |
| TTATTAGGAACCACTTGAGA+AGG | + | chr7_2:82846846-82846865 | Msa1082720:five_prime_UTR | 35.0% | |
| ATAGCATTAATAGTGCAGGT+TGG | - | chr7_2:82846936-82846955 | None:intergenic | 35.0% | |
| GCAAATAGCATTAATAGTGC+AGG | - | chr7_2:82846940-82846959 | None:intergenic | 35.0% | |
| TGAGGATGAATTAATCAAGG+AGG | - | chr7_2:82846964-82846983 | None:intergenic | 35.0% | |
| AAGTAGGATTGAAGAATGTG+AGG | - | chr7_2:82846982-82847001 | None:intergenic | 35.0% | |
| TGTCTTTCCTTAACCTTCTT+TGG | + | chr7_2:82847095-82847114 | Msa1082720:five_prime_UTR | 35.0% | |
| TTTCCTTAACCTTCTTTGGT+GGG | + | chr7_2:82847099-82847118 | Msa1082720:five_prime_UTR | 35.0% | |
| ! | TTTCTTTTTCCCACCAAAGA+AGG | - | chr7_2:82847111-82847130 | None:intergenic | 35.0% |
| GGTATCAAGAATGATCTAAG+AGG | + | chr7_2:82847166-82847185 | Msa1082720:CDS | 35.0% | |
| TCAAGAATGATCTAAGAGGA+AGG | + | chr7_2:82847170-82847189 | Msa1082720:CDS | 35.0% | |
| TAATGTGCTACAAGCAAGAT+TGG | + | chr7_2:82847194-82847213 | Msa1082720:CDS | 35.0% | |
| ! | GCAATACCTGTCATTTCATT+TGG | + | chr7_2:82847439-82847458 | Msa1082720:CDS | 35.0% |
| TGTTCACCAAATGAAATGAC+AGG | - | chr7_2:82847448-82847467 | None:intergenic | 35.0% | |
| GAACAACTAGAGAGAAATAC+TGG | + | chr7_2:82847463-82847482 | Msa1082720:CDS | 35.0% | |
| !! | TGTTGATTTGATACTTGCAG+AGG | + | chr7_2:82847592-82847611 | Msa1082720:intron | 35.0% |
| !! | GTTGATTTGATACTTGCAGA+GGG | + | chr7_2:82847593-82847612 | Msa1082720:intron | 35.0% |
| !! | ACATATTGAAGTTGATGCCA+AGG | - | chr7_2:82847639-82847658 | None:intergenic | 35.0% |
| TTGGCATCAACTTCAATATG+TGG | + | chr7_2:82847638-82847657 | Msa1082720:CDS | 35.0% | |
| GGCATTATACACTCAATCAT+TGG | + | chr7_2:82847659-82847678 | Msa1082720:CDS | 35.0% | |
| !!! | GGTCAACCTTTACTGATTTT+AGG | + | chr7_2:82847683-82847702 | Msa1082720:CDS | 35.0% |
| !!! | ACCTTTACTGATTTTAGGAG+TGG | + | chr7_2:82847688-82847707 | Msa1082720:CDS | 35.0% |
| AATGTGTACATGATCACAGT+AGG | - | chr7_2:82847719-82847738 | None:intergenic | 35.0% | |
| ! | TAGAAACCTGTTTCTTGGAT+GGG | + | chr7_2:82847775-82847794 | Msa1082720:CDS | 35.0% |
| ! | GTTTTACTTCTCCATGTTTC+CGG | + | chr7_2:82847831-82847850 | Msa1082720:intron | 35.0% |
| AAACGGGACCTAAATGTATA+GGG | - | chr7_2:82847858-82847877 | None:intergenic | 35.0% | |
| AAGCTATCATGGGTAACTTA+TGG | + | chr7_2:82847981-82848000 | Msa1082720:intron | 35.0% | |
| ! | GATTTTGTAGGGTATGTGTA+TGG | + | chr7_2:82848173-82848192 | Msa1082720:intron | 35.0% |
| GATTTCGTATCTTCTCTCTT+TGG | - | chr7_2:82848496-82848515 | None:intergenic | 35.0% | |
| ! | CAATTGAGTTTTTACCTTCG+TGG | + | chr7_2:82848515-82848534 | Msa1082720:CDS | 35.0% |
| CGTCACTGTTTGTAATCATT+TGG | + | chr7_2:82848684-82848703 | Msa1082720:intron | 35.0% | |
| AACAACAGTCCAATTGTCAT+AGG | - | chr7_2:82848888-82848907 | None:intergenic | 35.0% | |
| TGACAATTGGACTGTTGTTA+AGG | + | chr7_2:82848889-82848908 | Msa1082720:CDS | 35.0% | |
| GTTCCTGTTGTGTTCATAAT+TGG | + | chr7_2:82849034-82849053 | Msa1082720:CDS | 35.0% | |
| TTATTACTTTGACCACAGTG+TGG | + | chr7_2:82849090-82849109 | Msa1082720:CDS | 35.0% | |
| !!! | TTTGCTCCTTTTGGGATTTT+TGG | + | chr7_2:82849174-82849193 | Msa1082720:CDS | 35.0% |
| GTCATACCAAAAATCCCAAA+AGG | - | chr7_2:82849183-82849202 | None:intergenic | 35.0% | |
| !! | ACATTATTGTGTGGCCTTAT+TGG | + | chr7_2:82849290-82849309 | Msa1082720:CDS | 35.0% |
| TCTAGCAACTCTTAAACATC+AGG | + | chr7_2:82849364-82849383 | Msa1082720:CDS | 35.0% | |
| TCTGACTAAAAAAGGACCAA+TGG | + | chr7_2:82849436-82849455 | Msa1082720:intron | 35.0% | |
| ! | GCTAGTTTAGGACAGTTATA+TGG | + | chr7_2:82849521-82849540 | Msa1082720:CDS | 35.0% |
| ATTCAAGCAGCTACAAGTAT+GGG | + | chr7_2:82849735-82849754 | Msa1082720:CDS | 35.0% | |
| TCAAATATAGTCTCATCGAC+CGG | - | chr7_2:82849774-82849793 | None:intergenic | 35.0% | |
| !! | TTGCTTCAATCAGTATTGGT+TGG | + | chr7_2:82849855-82849874 | Msa1082720:CDS | 35.0% |
| ATACCAACTTCAGTACTTTG+GGG | + | chr7_2:82849912-82849931 | Msa1082720:CDS | 35.0% | |
| ATGGCAATTGAAAGTTTACC+TGG | + | chr7_2:82849948-82849967 | Msa1082720:CDS | 35.0% | |
| ! | TTTACCTGGAAACCAGTTTT+GGG | + | chr7_2:82849962-82849981 | Msa1082720:CDS | 35.0% |
| CTGTTTCAACAAAAGTAGCA+TGG | - | chr7_2:82850152-82850171 | None:intergenic | 35.0% | |
| ! | ACTAAGAGCATGATCATCAA+AGG | - | chr7_2:82850273-82850292 | None:intergenic | 35.0% |
| ! | GTGCACCTTTGAAAAATTTG+GGG | - | chr7_2:82850317-82850336 | None:intergenic | 35.0% |
| ! | GTGTGCACCTTTGAAAAATT+TGG | - | chr7_2:82850319-82850338 | None:intergenic | 35.0% |
| CAATATATCTTACCGATGCA+AGG | - | chr7_2:82850395-82850414 | None:intergenic | 35.0% | |
| GATTAACAGCAATCTGAGTT+TGG | + | chr7_2:82850491-82850510 | Msa1082720:intron | 35.0% | |
| TAGTATGCCTAAATTCACCA+CGG | - | chr7_2:82850574-82850593 | None:intergenic | 35.0% | |
| ! | TTAGGATCATTTCTTGGTGT+TGG | - | chr7_2:82850626-82850645 | None:intergenic | 35.0% |
| !! | CTCTCTTTTAATTCTCGTGT+GGG | + | chr7_2:82850665-82850684 | Msa1082720:CDS | 35.0% |
| ACCAAAGAAATGAGATTGTC+AGG | + | chr7_2:82850746-82850765 | Msa1082720:CDS | 35.0% | |
| ACCTGACAATCTCATTTCTT+TGG | - | chr7_2:82850750-82850769 | None:intergenic | 35.0% | |
| AAGAAATGAGATTGTCAGGT+AGG | + | chr7_2:82850750-82850769 | Msa1082720:CDS | 35.0% | |
| AGAAATGAGATTGTCAGGTA+GGG | + | chr7_2:82850751-82850770 | Msa1082720:CDS | 35.0% | |
| GTTGCTTCATTTCCAGTTTA+TGG | + | chr7_2:82850861-82850880 | Msa1082720:three_prime_UTR | 35.0% | |
| ! | CATAGGAAGCTCCATATTTT+TGG | - | chr7_2:82850963-82850982 | None:intergenic | 35.0% |
| CACAAACAAACTGAGGAAGT+AGG | - | chr7_2:82846998-82847017 | None:intergenic | 40.0% | |
| CTTTCCTTAACCTTCTTTGG+TGG | + | chr7_2:82847098-82847117 | Msa1082720:five_prime_UTR | 40.0% | |
| TTTCCCACCAAAGAAGGTTA+AGG | - | chr7_2:82847105-82847124 | None:intergenic | 40.0% | |
| GCCACTCCTAAAATCAGTAA+AGG | - | chr7_2:82847692-82847711 | None:intergenic | 40.0% | |
| TGCTAAAGAAAGACCTGAGT+TGG | + | chr7_2:82847751-82847770 | Msa1082720:CDS | 40.0% | |
| GCTAAAGAAAGACCTGAGTT+GGG | + | chr7_2:82847752-82847771 | Msa1082720:CDS | 40.0% | |
| ! | TTGGGTAGAAACCTGTTTCT+TGG | + | chr7_2:82847770-82847789 | Msa1082720:CDS | 40.0% |
| ! | GTAGAAACCTGTTTCTTGGA+TGG | + | chr7_2:82847774-82847793 | Msa1082720:CDS | 40.0% |
| AACGGGACCTAAATGTATAG+GGG | - | chr7_2:82847857-82847876 | None:intergenic | 40.0% | |
| CAAACGGGACCTAAATGTAT+AGG | - | chr7_2:82847859-82847878 | None:intergenic | 40.0% | |
| CTATACATTTAGGTCCCGTT+TGG | + | chr7_2:82847857-82847876 | Msa1082720:intron | 40.0% | |
| CTATTCTTACTGGCCATCTT+AGG | + | chr7_2:82848208-82848227 | Msa1082720:CDS | 40.0% | |
| GCACAAGGACAACAATATGT+TGG | - | chr7_2:82848446-82848465 | None:intergenic | 40.0% | |
| ATATTGTTGTCCTTGTGCCA+GGG | + | chr7_2:82848448-82848467 | Msa1082720:intron | 40.0% | |
| ! | TTGAGTTTTTACCTTCGTGG+AGG | + | chr7_2:82848518-82848537 | Msa1082720:CDS | 40.0% |
| TTCGCTTTGGTCCTTTCATT+TGG | + | chr7_2:82848556-82848575 | Msa1082720:CDS | 40.0% | |
| TAAGGAGAAGGCCAAATGAA+AGG | - | chr7_2:82848570-82848589 | None:intergenic | 40.0% | |
| AAAGCAGAAAGGCTAGATCA+TGG | + | chr7_2:82848599-82848618 | Msa1082720:CDS | 40.0% | |
| TTTCATGTTGCAGAGACAGT+CGG | - | chr7_2:82848654-82848673 | None:intergenic | 40.0% | |
| GCTCCAATTATGAACACAAC+AGG | - | chr7_2:82849040-82849059 | None:intergenic | 40.0% | |
| TGCTGGAAGACATTATTGTG+TGG | + | chr7_2:82849281-82849300 | Msa1082720:intron | 40.0% | |
| TTGCAGGAGGAATTCCAATA+AGG | - | chr7_2:82849307-82849326 | None:intergenic | 40.0% | |
| ATTGGAATTCCTCCTGCAAA+CGG | + | chr7_2:82849308-82849327 | Msa1082720:CDS | 40.0% | |
| GCTAGACTCTTTGTATGCAT+CGG | - | chr7_2:82849350-82849369 | None:intergenic | 40.0% | |
| AGCAACTGTAACAACACCAT+TGG | - | chr7_2:82849455-82849474 | None:intergenic | 40.0% | |
| CTTACTGATACTGTTTCGAG+CGG | - | chr7_2:82849498-82849517 | None:intergenic | 40.0% | |
| !! | TAAGAGGTGTCTGCATTTGA+TGG | - | chr7_2:82849565-82849584 | None:intergenic | 40.0% |
| GTGACAAATGATTAGGCACA+AGG | + | chr7_2:82849687-82849706 | Msa1082720:intron | 40.0% | |
| CATACTTGTAGCTGCTTGAA+TGG | - | chr7_2:82849736-82849755 | None:intergenic | 40.0% | |
| CATTCAAGCAGCTACAAGTA+TGG | + | chr7_2:82849734-82849753 | Msa1082720:CDS | 40.0% | |
| AAATATAGTCTCATCGACCG+GGG | - | chr7_2:82849772-82849791 | None:intergenic | 40.0% | |
| CAAATATAGTCTCATCGACC+GGG | - | chr7_2:82849773-82849792 | None:intergenic | 40.0% | |
| !! | CTTCAATCAGTATTGGTTGG+AGG | + | chr7_2:82849858-82849877 | Msa1082720:CDS | 40.0% |
| ! | GTTTACCTGGAAACCAGTTT+TGG | + | chr7_2:82849961-82849980 | Msa1082720:CDS | 40.0% |
| AAAGGATCCTTTCCCAAAAC+TGG | - | chr7_2:82849977-82849996 | None:intergenic | 40.0% | |
| !! | TCGGTGCTGTGAAAAGTAAA+AGG | - | chr7_2:82849995-82850014 | None:intergenic | 40.0% |
| !! | GGGAGAAAGTATTGTCTTAG+TGG | - | chr7_2:82850297-82850316 | None:intergenic | 40.0% |
| TTTACCGTTCAACCTTGCAT+CGG | + | chr7_2:82850380-82850399 | Msa1082720:CDS | 40.0% | |
| !! | ATCATTTCTTGGTGTTGGAG+TGG | - | chr7_2:82850621-82850640 | None:intergenic | 40.0% |
| !!! | CGGCTTTTAGGATCATTTCT+TGG | - | chr7_2:82850632-82850651 | None:intergenic | 40.0% |
| ! | GAGAATTAAAAGAGAGGTGC+GGG | - | chr7_2:82850661-82850680 | None:intergenic | 40.0% |
| CGAGAATTAAAAGAGAGGTG+CGG | - | chr7_2:82850662-82850681 | None:intergenic | 40.0% | |
| CCACACGAGAATTAAAAGAG+AGG | - | chr7_2:82850667-82850686 | None:intergenic | 40.0% | |
| !! | CCTCTCTTTTAATTCTCGTG+TGG | + | chr7_2:82850664-82850683 | Msa1082720:CDS | 40.0% |
| TTCTTTGGTCATTGGACTGT+TGG | - | chr7_2:82850735-82850754 | None:intergenic | 40.0% | |
| GAAATGAGATTGTCAGGTAG+GGG | + | chr7_2:82850752-82850771 | Msa1082720:CDS | 40.0% | |
| GTGTCTTAGAATGATGTAGG+AGG | + | chr7_2:82850831-82850850 | Msa1082720:three_prime_UTR | 40.0% | |
| !! | CAACCTGCTTTTGATACAGC+TGG | + | chr7_2:82846872-82846891 | Msa1082720:five_prime_UTR | 45.0% |
| ATGCCAGCTGTATCAAAAGC+AGG | - | chr7_2:82846878-82846897 | None:intergenic | 45.0% | |
| !! | CAGGTTGGCTTCAAAGACAT+GGG | - | chr7_2:82846921-82846940 | None:intergenic | 45.0% |
| TGCTACAAGCAAGATTGGAC+AGG | + | chr7_2:82847199-82847218 | Msa1082720:CDS | 45.0% | |
| TACAAGCAAGATTGGACAGG+TGG | + | chr7_2:82847202-82847221 | Msa1082720:CDS | 45.0% | |
| GTGGAATCAAAGCAGGTGTA+AGG | + | chr7_2:82847221-82847240 | Msa1082720:CDS | 45.0% | |
| TCTGACAGCTGTTCAAACCT+TGG | + | chr7_2:82847619-82847638 | Msa1082720:CDS | 45.0% | |
| AACAGGTTTCTACCCAACTC+AGG | - | chr7_2:82847767-82847786 | None:intergenic | 45.0% | |
| TTTCCGGCCCCTATACATTT+AGG | + | chr7_2:82847847-82847866 | Msa1082720:intron | 45.0% | |
| GATGGAACATGCTCCTAAGA+TGG | - | chr7_2:82848224-82848243 | None:intergenic | 45.0% | |
| AAACAACTCTCCCGCAATTC+GGG | - | chr7_2:82848260-82848279 | None:intergenic | 45.0% | |
| CAAACAACTCTCCCGCAATT+CGG | - | chr7_2:82848261-82848280 | None:intergenic | 45.0% | |
| CATATTGTTGTCCTTGTGCC+AGG | + | chr7_2:82848447-82848466 | Msa1082720:intron | 45.0% | |
| !! | CTTCGTGGAGGTTTGCTAAT+GGG | + | chr7_2:82848530-82848549 | Msa1082720:CDS | 45.0% |
| TGCTAATGGGATGTTCGCTT+TGG | + | chr7_2:82848543-82848562 | Msa1082720:CDS | 45.0% | |
| AAGGCTAGATCATGGCGTTA+TGG | + | chr7_2:82848607-82848626 | Msa1082720:CDS | 45.0% | |
| AGATCATGGCGTTATGGTAG+TGG | + | chr7_2:82848613-82848632 | Msa1082720:CDS | 45.0% | |
| CATAAGTGGCACACCATAGT+CGG | - | chr7_2:82848768-82848787 | None:intergenic | 45.0% | |
| ! | TGCCACTTATGGTCCTAGTT+TGG | + | chr7_2:82848777-82848796 | Msa1082720:CDS | 45.0% |
| GTCCAAACTAGGACCATAAG+TGG | - | chr7_2:82848782-82848801 | None:intergenic | 45.0% | |
| CTTATGGTCCTAGTTTGGAC+AGG | + | chr7_2:82848782-82848801 | Msa1082720:CDS | 45.0% | |
| ACCACGGATTTGGACTAAAG+AGG | - | chr7_2:82848856-82848875 | None:intergenic | 45.0% | |
| AGCACTGCAATCATAGTTGC+TGG | - | chr7_2:82849070-82849089 | None:intergenic | 45.0% | |
| TTTGTATGCATCGGAGACTG+CGG | - | chr7_2:82849341-82849360 | None:intergenic | 45.0% | |
| ! | GCAGACACCTCTTATTTACC+AGG | + | chr7_2:82849571-82849590 | Msa1082720:CDS | 45.0% |
| GATGGGTCCTGGTAAATAAG+AGG | - | chr7_2:82849581-82849600 | None:intergenic | 45.0% | |
| ! | ATCGACTTACTCGAGCAGAT+GGG | - | chr7_2:82849598-82849617 | None:intergenic | 45.0% |
| AGCTACAAGTATGGGAAACG+TGG | + | chr7_2:82849743-82849762 | Msa1082720:CDS | 45.0% | |
| !! | AGATGACTTGCTTCCTGTTG+AGG | + | chr7_2:82849809-82849828 | Msa1082720:CDS | 45.0% |
| CTTGCTTCCTGTTGAGGTAA+AGG | + | chr7_2:82849815-82849834 | Msa1082720:CDS | 45.0% | |
| CGTTGTTCCTTTACCTCAAC+AGG | - | chr7_2:82849825-82849844 | None:intergenic | 45.0% | |
| !! | TAGCCCCAAAGTACTGAAGT+TGG | - | chr7_2:82849918-82849937 | None:intergenic | 45.0% |
| ! | TTGGGGCTACTTTGCCTTTA+TGG | + | chr7_2:82849929-82849948 | Msa1082720:CDS | 45.0% |
| ! | CTTTCCCAAAACTGGTTTCC+AGG | - | chr7_2:82849969-82849988 | None:intergenic | 45.0% |
| !!! | CTGGAAACCAGTTTTGGGAA+AGG | + | chr7_2:82849967-82849986 | Msa1082720:CDS | 45.0% |
| CTAACTTGGGTACCTATTGC+TGG | + | chr7_2:82850237-82850256 | Msa1082720:CDS | 45.0% | |
| GGAAACATGACTCCAGCAAT+AGG | - | chr7_2:82850252-82850271 | None:intergenic | 45.0% | |
| CTTACCGATGCAAGGTTGAA+CGG | - | chr7_2:82850387-82850406 | None:intergenic | 45.0% | |
| CAAGAAGCCGTGGTGAATTT+AGG | + | chr7_2:82850564-82850583 | Msa1082720:CDS | 45.0% | |
| GGAGTGGAGCTATTGATCTT+TGG | - | chr7_2:82850605-82850624 | None:intergenic | 45.0% | |
| !! | TGTCTTGGTGTTTGGGATCA+GGG | - | chr7_2:82850793-82850812 | None:intergenic | 45.0% |
| !! | TTGTCTTGGTGTTTGGGATC+AGG | - | chr7_2:82850794-82850813 | None:intergenic | 45.0% |
| !! | AACATATATATATATTAAAT+TGG | - | chr7_2:82850057-82850076 | None:intergenic | 5.0% |
| CAGGTTGTGACCTTCTCAAG+TGG | - | chr7_2:82846859-82846878 | None:intergenic | 50.0% | |
| !! | GCAGGTTGGCTTCAAAGACA+TGG | - | chr7_2:82846922-82846941 | None:intergenic | 50.0% |
| TGGACAGGTGGAATCAAAGC+AGG | + | chr7_2:82847214-82847233 | Msa1082720:CDS | 50.0% | |
| ! | AACCTGTTTCTTGGATGGGC+TGG | + | chr7_2:82847779-82847798 | Msa1082720:CDS | 50.0% |
| ATCCAGCCCATCCAAGAAAC+AGG | - | chr7_2:82847784-82847803 | None:intergenic | 50.0% | |
| !! | TGTTTCTTGGATGGGCTGGA+TGG | + | chr7_2:82847783-82847802 | Msa1082720:CDS | 50.0% |
| ATGTATAGGGGCCGGAAACA+TGG | - | chr7_2:82847845-82847864 | None:intergenic | 50.0% | |
| GGACCTAAATGTATAGGGGC+CGG | - | chr7_2:82847853-82847872 | None:intergenic | 50.0% | |
| CTAGTGCTGTCACTGTCATG+TGG | + | chr7_2:82848119-82848138 | Msa1082720:intron | 50.0% | |
| !! | TCGGGTAAAGCGGTTGATGA+TGG | - | chr7_2:82848242-82848261 | None:intergenic | 50.0% |
| CAACCGCTTTACCCGAATTG+CGG | + | chr7_2:82848246-82848265 | Msa1082720:CDS | 50.0% | |
| AACCGCTTTACCCGAATTGC+GGG | + | chr7_2:82848247-82848266 | Msa1082720:CDS | 50.0% | |
| CGAATTGCGGGAGAGTTGTT+TGG | + | chr7_2:82848259-82848278 | Msa1082720:CDS | 50.0% | |
| GAAACTCATCCACAAGTCCC+TGG | - | chr7_2:82848468-82848487 | None:intergenic | 50.0% | |
| CCATTAGCAAACCTCCACGA+AGG | - | chr7_2:82848532-82848551 | None:intergenic | 50.0% | |
| !! | CCTTCGTGGAGGTTTGCTAA+TGG | + | chr7_2:82848529-82848548 | Msa1082720:CDS | 50.0% |
| !! | CGTAGCCTTATAGCCGACTA+TGG | + | chr7_2:82848752-82848771 | Msa1082720:CDS | 50.0% |
| GCACACCATAGTCGGCTATA+AGG | - | chr7_2:82848760-82848779 | None:intergenic | 50.0% | |
| !! | CGACTATGGTGTGCCACTTA+TGG | + | chr7_2:82848766-82848785 | Msa1082720:CDS | 50.0% |
| AGGACACACCTGTCCAAACT+AGG | - | chr7_2:82848793-82848812 | None:intergenic | 50.0% | |
| AACACTTGCAGTCGGCATGT+AGG | - | chr7_2:82848813-82848832 | None:intergenic | 50.0% | |
| ! | CCGTTTGGAACACTTGCAGT+CGG | - | chr7_2:82848821-82848840 | None:intergenic | 50.0% |
| CCGACTGCAAGTGTTCCAAA+CGG | + | chr7_2:82848818-82848837 | Msa1082720:CDS | 50.0% | |
| GTGTTCCAAACGGTATCCCA+AGG | + | chr7_2:82848828-82848847 | Msa1082720:CDS | 50.0% | |
| !! | TTGGACTAAAGAGGCGCCTT+GGG | - | chr7_2:82848847-82848866 | None:intergenic | 50.0% |
| !! | TTTGGACTAAAGAGGCGCCT+TGG | - | chr7_2:82848848-82848867 | None:intergenic | 50.0% |
| GCCTCTTTAGTCCAAATCCG+TGG | + | chr7_2:82848852-82848871 | Msa1082720:CDS | 50.0% | |
| AGTCCAATTGTCATAGGCGC+CGG | - | chr7_2:82848882-82848901 | None:intergenic | 50.0% | |
| AAAGCTGAGATGCCACACTG+TGG | - | chr7_2:82849105-82849124 | None:intergenic | 50.0% | |
| ! | GATCGACTTACTCGAGCAGA+TGG | - | chr7_2:82849599-82849618 | None:intergenic | 50.0% |
| AGGTGCACACCTTCAAGACT+TGG | + | chr7_2:82850329-82850348 | Msa1082720:CDS | 50.0% | |
| CAGCTGCATCCAAGTCTTGA+AGG | - | chr7_2:82850341-82850360 | None:intergenic | 50.0% | |
| CTTGGATGCAGCTGAGTATG+AGG | + | chr7_2:82850347-82850366 | Msa1082720:CDS | 50.0% | |
| ! | CAGCAATCTGAGTTTGGAGC+TGG | + | chr7_2:82850497-82850516 | Msa1082720:intron | 50.0% |
| GGAGCTGGTGCTTCTCATAT+CGG | + | chr7_2:82850512-82850531 | Msa1082720:CDS | 50.0% | |
| GGTGCTTCTCATATCGGAGA+AGG | + | chr7_2:82850518-82850537 | Msa1082720:CDS | 50.0% | |
| GAAGTCATCACAAGAAGCCG+TGG | + | chr7_2:82850554-82850573 | Msa1082720:CDS | 50.0% | |
| ! | TGTTTGGGATCAGGGTTGAG+AGG | - | chr7_2:82850785-82850804 | None:intergenic | 50.0% |
| CTCCCGCAATTCGGGTAAAG+CGG | - | chr7_2:82848252-82848271 | None:intergenic | 55.0% | |
| ATCCACAAGTCCCTGGCACA+AGG | - | chr7_2:82848461-82848480 | None:intergenic | 55.0% | |
| GTCCAATTGTCATAGGCGCC+GGG | - | chr7_2:82848881-82848900 | None:intergenic | 55.0% | |
| GGTATGACTCCGTTTGCAGG+AGG | - | chr7_2:82849320-82849339 | None:intergenic | 55.0% | |
| TGCGGTATGACTCCGTTTGC+AGG | - | chr7_2:82849323-82849342 | None:intergenic | 55.0% | |
| TTACTCGAGCAGATGGGTCC+TGG | - | chr7_2:82849592-82849611 | None:intergenic | 55.0% | |
| TCGCGACTGAGCAAAGTCCT+CGG | + | chr7_2:82850693-82850712 | Msa1082720:CDS | 55.0% | |
| ACTGAGCAAAGTCCTCGGTC+TGG | + | chr7_2:82850698-82850717 | Msa1082720:CDS | 55.0% | |
| GTCCTTGTGCCAGGGACTTG+TGG | + | chr7_2:82848456-82848475 | Msa1082720:intron | 60.0% | |
| AGGCGCCTTGGGATACCGTT+TGG | - | chr7_2:82848836-82848855 | None:intergenic | 60.0% | |
| AGTCCAAATCCGTGGTCGCC+CGG | + | chr7_2:82848860-82848879 | Msa1082720:CDS | 60.0% | |
| TATGGGAAACGTGGACGCCC+CGG | + | chr7_2:82849752-82849771 | Msa1082720:CDS | 60.0% | |
| ! | TGCGGGCTCAGACGGCTTTT+AGG | - | chr7_2:82850644-82850663 | None:intergenic | 60.0% |
| ! | AAGAGAGGTGCGGGCTCAGA+CGG | - | chr7_2:82850652-82850671 | None:intergenic | 60.0% |
| AGTCCTCGGTCTGGCGTAAG+AGG | + | chr7_2:82850707-82850726 | Msa1082720:CDS | 60.0% | |
| CGCCCGGCGCCTATGACAAT+TGG | + | chr7_2:82848876-82848895 | Msa1082720:CDS | 65.0% | |
| GTGCCTCTTACGCCAGACCG+AGG | - | chr7_2:82850713-82850732 | None:intergenic | 65.0% | |
| !! | TCATAGGCGCCGGGCGACCA+CGG | - | chr7_2:82848872-82848891 | None:intergenic | 70.0% |
| GCGCCGGGCGACCACGGATT+TGG | - | chr7_2:82848866-82848885 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82846706 | 82851146 | 82846706 | ID=Msa1082720;Name=Msa1082720 |
| chr7_2 | mRNA | 82846706 | 82851146 | 82846706 | ID=Msa1082720-mRNA-1;Parent=Msa1082720;Name=Msa1082720-mRNA-1;_AED=0.09;_eAED=0.10;_QI=405|0.91|0.92|1|0.91|0.84|13|326|734 |
| chr7_2 | exon | 82846706 | 82846749 | 82846706 | ID=Msa1082720-mRNA-1:exon:21592;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82846778 | 82847242 | 82846778 | ID=Msa1082720-mRNA-1:exon:21593;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82847402 | 82847484 | 82847402 | ID=Msa1082720-mRNA-1:exon:21594;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82847612 | 82847804 | 82847612 | ID=Msa1082720-mRNA-1:exon:21595;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82848183 | 82848321 | 82848183 | ID=Msa1082720-mRNA-1:exon:21596;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82848469 | 82848634 | 82848469 | ID=Msa1082720-mRNA-1:exon:21597;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82848744 | 82848940 | 82848744 | ID=Msa1082720-mRNA-1:exon:21598;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82849022 | 82849195 | 82849022 | ID=Msa1082720-mRNA-1:exon:21599;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82849290 | 82849385 | 82849290 | ID=Msa1082720-mRNA-1:exon:21600;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82849470 | 82849607 | 82849470 | ID=Msa1082720-mRNA-1:exon:21601;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82849702 | 82850027 | 82849702 | ID=Msa1082720-mRNA-1:exon:21602;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82850134 | 82850401 | 82850134 | ID=Msa1082720-mRNA-1:exon:21603;Parent=Msa1082720-mRNA-1 |
| chr7_2 | exon | 82850500 | 82851146 | 82850500 | ID=Msa1082720-mRNA-1:exon:21604;Parent=Msa1082720-mRNA-1 |
| chr7_2 | five_prime_UTR | 82846706 | 82846749 | 82846706 | ID=Msa1082720-mRNA-1:five_prime_utr;Parent=Msa1082720-mRNA-1 |
| chr7_2 | five_prime_UTR | 82846778 | 82847138 | 82846778 | ID=Msa1082720-mRNA-1:five_prime_utr;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82847139 | 82847242 | 82847139 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82847402 | 82847484 | 82847402 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82847612 | 82847804 | 82847612 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82848183 | 82848321 | 82848183 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82848469 | 82848634 | 82848469 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82848744 | 82848940 | 82848744 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82849022 | 82849195 | 82849022 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82849290 | 82849385 | 82849290 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82849470 | 82849607 | 82849470 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82849702 | 82850027 | 82849702 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82850134 | 82850401 | 82850134 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | CDS | 82850500 | 82850820 | 82850500 | ID=Msa1082720-mRNA-1:cds;Parent=Msa1082720-mRNA-1 |
| chr7_2 | three_prime_UTR | 82850821 | 82851146 | 82850821 | ID=Msa1082720-mRNA-1:three_prime_utr;Parent=Msa1082720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
