AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082780 MtrunA17_Chr7g0270481 97.215 826 18 1 1 821 1 826 0.0 1685
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082780 AT3G62240.1 53.037 856 314 15 1 816 1 808 0.0 839
Msa1082780 AT2G47090.1 43.943 842 373 18 1 820 1 765 0.0 625
Msa1082780 AT2G47090.3 43.112 842 373 19 1 820 1 758 0.0 602
Msa1082780 AT2G47090.2 42.162 842 365 19 1 820 1 742 0.0 574
Msa1082780 AT2G47090.5 41.905 840 349 18 1 820 1 721 0.0 572
Msa1082780 AT2G47090.4 71.617 303 83 2 1 300 1 303 3.54e-163 492

Find 242 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCTGGGCATTGAAATT+AGG 0.154126 7_2:+82910334 Msa1082780:five_prime_UTR
AATGTATCTGTTATTAATTC+TGG 0.169185 7_2:+82913874 Msa1082780:CDS
GAACGATTGTTATTGCAATT+AGG 0.193587 7_2:-82910306 None:intergenic
CAAGAAAATGACGGGGTTTA+TGG 0.195895 7_2:+82914498 Msa1082780:CDS
TCAAGATACCGTCAGGCTTT+AGG 0.204640 7_2:+82913724 Msa1082780:CDS
AACGATTGTTATTGCAATTA+GGG 0.216693 7_2:-82910305 None:intergenic
AATGGTAACAATAATGATTC+TGG 0.227254 7_2:+82914969 Msa1082780:CDS
CAAGATACCGTCAGGCTTTA+GGG 0.237064 7_2:+82913725 Msa1082780:CDS
TCTCTCTGCTTCCGAGCATC+TGG 0.256866 7_2:-82914432 None:intergenic
AGTTCATTGTCCCCATAAAA+TGG 0.259485 7_2:-82912624 None:intergenic
TGCTTATGTGTTGATTCAAC+TGG 0.263698 7_2:-82912521 None:intergenic
TCTTCCTTTCCTCCACTTCC+TGG 0.267843 7_2:+82913772 Msa1082780:CDS
TTGGCTGAATGGGATGATTT+TGG 0.271061 7_2:+82915244 Msa1082780:three_prime_UTR
TGATCTGGGCATTGAAATTA+GGG 0.277307 7_2:+82910335 Msa1082780:five_prime_UTR
TTGTAGAAACCACAGTTAAA+AGG 0.280870 7_2:+82915095 Msa1082780:three_prime_UTR
CTCACTTGTGCCGCAGAAAC+TGG 0.285371 7_2:-82914177 None:intergenic
GGAACAACAGACAGTTTAAA+TGG 0.299042 7_2:+82914951 Msa1082780:CDS
CATGGCCATTGAAGCCAGTT+TGG 0.313478 7_2:+82913564 Msa1082780:CDS
GCTCTGTGGCTTTGAAAATC+AGG 0.326631 7_2:+82915057 Msa1082780:three_prime_UTR
CGACAAAGGTTTAGGAATAT+AGG 0.326957 7_2:+82912291 Msa1082780:CDS
ACAACAAAGTCTCAAAATTC+TGG 0.329736 7_2:+82913952 Msa1082780:CDS
GTTCAAGGCGACAAAGGTTT+AGG 0.329883 7_2:+82912283 Msa1082780:CDS
TAGGGGAAGAATGAATTTCT+AGG 0.331653 7_2:-82910287 None:intergenic
TTTAAACTGTCTGTTGTTCC+AGG 0.338754 7_2:-82914948 None:intergenic
AAAATCAGGCACACTTGAAT+TGG 0.340918 7_2:+82915071 Msa1082780:three_prime_UTR
TCGAAGGACACACGTGATAA+TGG 0.341903 7_2:+82914078 Msa1082780:CDS
CAAAGCCACAGAGCAGAATC+AGG 0.344177 7_2:-82915048 None:intergenic
CTTAGGAGGTAATCATTTCA+TGG 0.349756 7_2:+82915145 Msa1082780:three_prime_UTR
CAATCGTTCGTGATTTGATC+TGG 0.354941 7_2:+82910320 Msa1082780:five_prime_UTR
TCGGAAGCAGAGAGAACTTT+TGG 0.358351 7_2:+82914440 Msa1082780:CDS
CACATAAGAAATGTTGTTGT+CGG 0.363908 7_2:-82912971 None:intergenic
CTTTCCTCCACTTCCTGGCC+AGG 0.366839 7_2:+82913777 Msa1082780:CDS
CAGTTTATCTAATCAAAATA+AGG 0.369601 7_2:+82914806 Msa1082780:CDS
AACAATAATGATTCTGGAGT+TGG 0.372582 7_2:+82914975 Msa1082780:CDS
GTTCATTGTCCCCATAAAAT+GGG 0.391907 7_2:-82912623 None:intergenic
GCATATGTGCAGTTTGTGTT+TGG 0.399812 7_2:+82912350 Msa1082780:CDS
GACAAAGGTTTAGGAATATA+GGG 0.400686 7_2:+82912292 Msa1082780:CDS
TGAACCTTCAGACTCGTGTT+TGG 0.406166 7_2:-82913806 None:intergenic
TTCAAGTGTTCATATGAAAG+TGG 0.409267 7_2:+82915287 Msa1082780:three_prime_UTR
AAAGCGTAATGCTGCTCTTC+AGG 0.411058 7_2:+82913305 Msa1082780:CDS
AAATAAATAGTAGGAGGGAT+TGG 0.412548 7_2:+82910143 Msa1082780:five_prime_UTR
GATTTCTCTAGACTCATATC+AGG 0.414541 7_2:-82915434 None:intergenic
AAGGTAAGTCATTAGATGTT+AGG 0.416037 7_2:+82914568 Msa1082780:CDS
GTACGAGGTGTTTGGCGAAA+GGG 0.419262 7_2:+82915005 Msa1082780:CDS
GGCTGCCTGTACGAGGTGTT+TGG 0.421031 7_2:+82914997 Msa1082780:CDS
CTTTAATTGCAGGCAGCACC+CGG 0.423152 7_2:+82912785 Msa1082780:intron
GGTGTATACCGTCAGGCTCT+TGG 0.425291 7_2:+82912069 Msa1082780:intron
AGAAATGTTGTTGTCGGAAG+TGG 0.432266 7_2:-82912965 None:intergenic
CTGAATTCCATTGGCTGAAT+GGG 0.436486 7_2:+82915234 Msa1082780:three_prime_UTR
TGCTGTCTGCGCCGAACCAT+TGG 0.437829 7_2:+82910389 Msa1082780:CDS
TCAGAAATTGAAACTCCAAC+AGG 0.437868 7_2:-82914147 None:intergenic
TCAATCTGAATCAGAGATGA+AGG 0.441203 7_2:+82913031 Msa1082780:CDS
GTTTCATCTTGTACCTGAGC+TGG 0.443738 7_2:+82914398 Msa1082780:CDS
GTGAGCCAACTTCAAGTAAT+GGG 0.445956 7_2:+82913614 Msa1082780:CDS
CTCAGAGTGCGCCTTGGTGA+TGG 0.448748 7_2:+82914876 Msa1082780:CDS
CGCAACCCATTCCAATGGTT+CGG 0.449476 7_2:-82910400 None:intergenic
AGTCTCCAAACTGGCTTCAA+TGG 0.450474 7_2:-82913569 None:intergenic
GCTGAATTCCATTGGCTGAA+TGG 0.451935 7_2:+82915233 Msa1082780:three_prime_UTR
TGTTAATTACTGTCTTCATC+TGG 0.454941 7_2:-82913975 None:intergenic
TTTGTGTTTGGAGGGAAGGA+AGG 0.455055 7_2:+82912362 Msa1082780:CDS
CAGGATCAGCGCCGTGGAAG+AGG 0.456242 7_2:+82913502 Msa1082780:CDS
AGCATTAGCAGTCTCCAAAC+TGG 0.458195 7_2:-82913578 None:intergenic
TCAAGGACCACTTCTGATCC+TGG 0.464866 7_2:+82914930 Msa1082780:CDS
TGTAGAAACCACAGTTAAAA+GGG 0.466620 7_2:+82915096 Msa1082780:three_prime_UTR
TCGTGTGGAAAATAAATAGT+AGG 0.472571 7_2:+82910134 Msa1082780:five_prime_UTR
CTTCCCTCACCTCAGACGGC+AGG 0.474593 7_2:-82912125 None:intergenic
AGCGGAGGCTGGCTACTTGT+AGG 0.475176 7_2:-82914207 None:intergenic
TAAACCTTCAGAAGAGAAGT+TGG 0.476136 7_2:+82914659 Msa1082780:CDS
AAGGCGCACTCTGAGGAACT+TGG 0.478049 7_2:-82914868 None:intergenic
ATTGGCCCATTACTTGAAGT+TGG 0.479995 7_2:-82913619 None:intergenic
AATAAATAGTAGGAGGGATT+GGG 0.480636 7_2:+82910144 Msa1082780:five_prime_UTR
CTCTCTGCTTCCGAGCATCT+GGG 0.484742 7_2:-82914431 None:intergenic
AATGATCACGACGAAATGTC+CGG 0.484850 7_2:-82913525 None:intergenic
AGGGGAAGAATGAATTTCTA+GGG 0.485009 7_2:-82910286 None:intergenic
AACAAAGATGAGATTACATT+CGG 0.486174 7_2:-82910514 None:intergenic
AATCGAAGACGTGGAGCGGA+AGG 0.486770 7_2:-82910242 None:intergenic
TCTCCGTCATCATAAGCAAT+TGG 0.486938 7_2:-82913637 None:intergenic
TTATAGTATTCAAATTGTCC+CGG 0.487329 7_2:-82912804 None:intergenic
ACAATAATGATTCTGGAGTT+GGG 0.488582 7_2:+82914976 Msa1082780:CDS
TTCTGAAAATCAACTTTCCA+TGG 0.491694 7_2:+82913546 Msa1082780:CDS
ATCCCTGCCGTCTGAGGTGA+GGG 0.493527 7_2:+82912122 Msa1082780:CDS
TCTAATCAAAATAAGGAGGA+TGG 0.493564 7_2:+82914813 Msa1082780:CDS
TCTCCACATTCAGCGGAGGC+TGG 0.494500 7_2:-82914218 None:intergenic
CCTTGGTGATGGTTCTGCTT+CGG 0.495622 7_2:+82914887 Msa1082780:CDS
ACCTCCAACTTCTCTTCTGA+AGG 0.497647 7_2:-82914663 None:intergenic
AGCAACAAAATGATGGTTCA+AGG 0.497984 7_2:+82912268 Msa1082780:CDS
TGTACGAGGTGTTTGGCGAA+AGG 0.499209 7_2:+82915004 Msa1082780:CDS
TTATTAATTCTGGAAATGCC+TGG 0.499763 7_2:+82913884 Msa1082780:CDS
ATATAGACACAATAATGAAC+AGG 0.501473 7_2:+82913483 Msa1082780:CDS
ACACTTTCCAAGAAAATGAC+GGG 0.501766 7_2:+82914490 Msa1082780:CDS
CTAATCAAAATAAGGAGGAT+GGG 0.502336 7_2:+82914814 Msa1082780:CDS
GTGGACTGTGTGCAGCAGTT+TGG 0.503287 7_2:+82914372 Msa1082780:CDS
CGTGAGCCAACTTCAAGTAA+TGG 0.503834 7_2:+82913613 Msa1082780:CDS
CTAGAGTTTGTTTGAATCTG+CGG 0.504344 7_2:-82914735 None:intergenic
TTAGATTGCGAAGGTTGTAC+AGG 0.504697 7_2:-82913925 None:intergenic
TGTTGAAGGCTGAATTCCAT+TGG 0.505006 7_2:+82915225 Msa1082780:three_prime_UTR
GGGCATAGTCTTGCCAGCTC+AGG 0.505258 7_2:-82914411 None:intergenic
TCAGTCTGCCAACAAGTCCT+TGG 0.512432 7_2:+82914245 Msa1082780:CDS
TCTGCGCCGAACCATTGGAA+TGG 0.513729 7_2:+82910394 Msa1082780:CDS
CAAACTGGCTTCAATGGCCA+TGG 0.514311 7_2:-82913563 None:intergenic
TCAAGTACAGCAAGCTGGCA+TGG 0.516669 7_2:+82915188 Msa1082780:three_prime_UTR
GAGGTGAGGGAAGGGAAGGT+TGG 0.517352 7_2:+82912135 Msa1082780:CDS
AAACAATAAATTTCTTGGCA+AGG 0.518069 7_2:-82913007 None:intergenic
CAAACCTCGCGATGCAAACA+AGG 0.519151 7_2:-82910429 None:intergenic
AAGGGAAGGTTGGACCGTAC+TGG 0.519167 7_2:+82912145 Msa1082780:CDS
AGGGCATAGCTCTAGACCTC+TGG 0.522733 7_2:+82913744 Msa1082780:CDS
TGCCGTCTGAGGTGAGGGAA+GGG 0.523025 7_2:+82912127 Msa1082780:CDS
TAATCAAAATAAGGAGGATG+GGG 0.524367 7_2:+82914815 Msa1082780:CDS
TTCCCTCACCTCAGACGGCA+GGG 0.524435 7_2:-82912124 None:intergenic
CTGCGCCGAACCATTGGAAT+GGG 0.524909 7_2:+82910395 Msa1082780:CDS
CCGACGTAAACGTGCGGCCA+TGG 0.525256 7_2:-82913839 None:intergenic
GAATTAGCAAAACTTGATGC+TGG 0.526095 7_2:-82914006 None:intergenic
CAAGTACAGCAAGCTGGCAT+GGG 0.527223 7_2:+82915189 Msa1082780:three_prime_UTR
CATCCCTGCCGTCTGAGGTG+AGG 0.529977 7_2:+82912121 Msa1082780:CDS
AACATAAGACTAAGCTTGGT+GGG 0.530293 7_2:+82914763 Msa1082780:CDS
GAAGTTGGAGGTGCTATCAA+AGG 0.531226 7_2:+82914674 Msa1082780:CDS
AGTCAACATAAGACTAAGCT+TGG 0.534231 7_2:+82914759 Msa1082780:CDS
AATGTCGACAAGAAAGGTAA+AGG 0.536933 7_2:+82914549 Msa1082780:CDS
GCAGTAGCTAATGATTCAAA+CGG 0.538134 7_2:-82913685 None:intergenic
GCAGTTTGTGTTTGGAGGGA+AGG 0.538351 7_2:+82912358 Msa1082780:CDS
CTCGTTGAAAACAACCCTGT+TGG 0.539026 7_2:+82914132 Msa1082780:CDS
AAATCATCCCATTCAGCCAA+TGG 0.539617 7_2:-82915241 None:intergenic
TAATCTCATCTTTGTTACCA+AGG 0.539655 7_2:+82910521 Msa1082780:CDS
AATCGTTCGTGATTTGATCT+GGG 0.540574 7_2:+82910321 Msa1082780:five_prime_UTR
TACGAGGTGTTTGGCGAAAG+GGG 0.542527 7_2:+82915006 Msa1082780:CDS
ATCAGCGCCGTGGAAGAGGC+CGG 0.543191 7_2:+82913506 Msa1082780:CDS
TATGTGCAGTTTGTGTTTGG+AGG 0.543683 7_2:+82912353 Msa1082780:CDS
TTATCACGTGTGTCCTTCGA+TGG 0.543805 7_2:-82914075 None:intergenic
ATCAACTTCAAGATACCGTC+AGG 0.546666 7_2:+82913717 Msa1082780:CDS
GGGCAGACTGAAACTTCAAA+TGG 0.546857 7_2:+82914783 Msa1082780:CDS
ATCGAGGAGCAACAAAATGA+TGG 0.547275 7_2:+82912261 Msa1082780:CDS
TAGCCTTGATCATCTTGTAA+TGG 0.548155 7_2:-82912206 None:intergenic
GATAGATACTGATGCATATG+TGG 0.548437 7_2:+82914353 Msa1082780:CDS
TGTGGAAAATAAATAGTAGG+AGG 0.550491 7_2:+82910137 Msa1082780:five_prime_UTR
GAAATGTCCGGCCTCTTCCA+CGG 0.552472 7_2:-82913513 None:intergenic
AGGCTCTTGGAGATTATACA+AGG 0.552536 7_2:+82912082 Msa1082780:intron
AGACATAATGCTACGGAACA+TGG 0.555987 7_2:+82913264 Msa1082780:CDS
GTGTCCTTCGATGGACCAGC+AGG 0.556123 7_2:-82914066 None:intergenic
AGATTTCAAGTACAGCAAGC+TGG 0.556264 7_2:+82915183 Msa1082780:three_prime_UTR
CAAGACTATGCCCAGATGCT+CGG 0.556865 7_2:+82914421 Msa1082780:CDS
TGCACATATGCAACTTATGA+CGG 0.557493 7_2:-82912338 None:intergenic
TAGCCAGCCTCCGCTGAATG+TGG 0.558724 7_2:+82914215 Msa1082780:CDS
GGTGCTTATCGCACCGACAA+AGG 0.559739 7_2:+82914696 Msa1082780:CDS
CAGCGCTAGCACCCATCGCA+AGG 0.559993 7_2:+82914521 Msa1082780:CDS
CATCAGTATCTATCGTGCCT+TGG 0.562624 7_2:-82914344 None:intergenic
CTGCCGTCTGAGGTGAGGGA+AGG 0.564945 7_2:+82912126 Msa1082780:CDS
TTTCGCCAAACACCTCGTAC+AGG 0.565462 7_2:-82915002 None:intergenic
ACTGTACACACACATGTCTA+CGG 0.565907 7_2:+82912644 Msa1082780:CDS
GTGGAAAATAAATAGTAGGA+GGG 0.567167 7_2:+82910138 Msa1082780:five_prime_UTR
ACATTTCTTATGTGAAGATG+AGG 0.568216 7_2:+82912980 Msa1082780:CDS
TTCTAGATCTTGAAAACTCA+AGG 0.570577 7_2:+82914913 Msa1082780:CDS
AGATGATCAAGGCTATGTGC+AGG 0.572429 7_2:+82912214 Msa1082780:CDS
GATGGAAGTGAGAGTGAGAG+AGG 0.573018 7_2:+82912561 Msa1082780:CDS
TATAGTATTCAAATTGTCCC+GGG 0.574326 7_2:-82912803 None:intergenic
GCTGCACATAGAACTGCTCA+TGG 0.574984 7_2:+82914036 Msa1082780:CDS
GGTTGTACAGGTCCACGACT+TGG 0.578137 7_2:-82913913 None:intergenic
GCTTATGTGTTGATTCAACT+GGG 0.578614 7_2:-82912520 None:intergenic
AAGTTGGAGGTGCTATCAAA+GGG 0.579069 7_2:+82914675 Msa1082780:CDS
TAGGAATATAGGGCAGCTGA+AGG 0.579349 7_2:+82912302 Msa1082780:CDS
CTTCCCCTGATTCTGCTCTG+TGG 0.579349 7_2:+82915043 Msa1082780:exon
AAAGCCACAGAGCAGAATCA+GGG 0.580520 7_2:-82915047 None:intergenic
CAACATAAGACTAAGCTTGG+TGG 0.581293 7_2:+82914762 Msa1082780:CDS
GAAACGAAGACGAGCGACGC+AGG 0.581657 7_2:-82910457 None:intergenic
GGAAGTGAGAGTGAGAGAGG+TGG 0.582135 7_2:+82912564 Msa1082780:CDS
GGGCCAATTGCTTATGATGA+CGG 0.583706 7_2:+82913634 Msa1082780:CDS
GCTCATGGAAAACTACCTGC+TGG 0.585320 7_2:+82914051 Msa1082780:CDS
TCAAGTGTTCATATGAAAGT+GGG 0.586006 7_2:+82915288 Msa1082780:three_prime_UTR
GTCTGAGGTGAGGGAAGGGA+AGG 0.587308 7_2:+82912131 Msa1082780:CDS
CCATTGGAATGGGTTGCGTA+CGG 0.587419 7_2:+82910405 Msa1082780:CDS
ACGAAGACGAGCGACGCAGG+TGG 0.591019 7_2:-82910454 None:intergenic
ACGAGGTGTTTGGCGAAAGG+GGG 0.591849 7_2:+82915007 Msa1082780:CDS
CGAGGTGTTTGGCGAAAGGG+GGG 0.592185 7_2:+82915008 Msa1082780:CDS
GGTTTGAAGAGAAGAAGACA+TGG 0.592428 7_2:+82910356 Msa1082780:exon
ATGATAGAATTCATGTCGGT+TGG 0.593233 7_2:+82915408 Msa1082780:three_prime_UTR
CTGGCCAGGAAGTGGAGGAA+AGG 0.594675 7_2:-82913776 None:intergenic
TGTCTATATCGAAAACTAGT+CGG 0.595511 7_2:-82913469 None:intergenic
ACAGGTGACTCCGACGTGGA+TGG 0.598357 7_2:+82912543 Msa1082780:CDS
AAAATGCATTCATATCCTCA+TGG 0.599319 7_2:-82912170 None:intergenic
AAGTTCCTCAGAGTGCGCCT+TGG 0.601135 7_2:+82914870 Msa1082780:CDS
ACAAAGCAAAACAGTACACT+TGG 0.601552 7_2:-82915313 None:intergenic
TTCCCTTCCCTCACCTCAGA+CGG 0.602617 7_2:-82912129 None:intergenic
TCCACGACTTGGTACAGACC+AGG 0.607283 7_2:-82913902 None:intergenic
AACACTTTCCAAGAAAATGA+CGG 0.610939 7_2:+82914489 Msa1082780:CDS
AAGACGTGGAGCGGAAGGGT+CGG 0.611141 7_2:-82910237 None:intergenic
CCGTACGCAACCCATTCCAA+TGG 0.611857 7_2:-82910405 None:intergenic
GACATAGAGACATAATGCTA+CGG 0.612845 7_2:+82913257 Msa1082780:intron
GCCTGGTCTGTACCAAGTCG+TGG 0.614242 7_2:+82913901 Msa1082780:CDS
TGTTGTTCCAGGATCAGAAG+TGG 0.615164 7_2:-82914937 None:intergenic
CGGACCTTGTTTGCATCGCG+AGG 0.615298 7_2:+82910425 Msa1082780:CDS
AACATGGAGGGCGTATGTCA+CGG 0.615404 7_2:+82913280 Msa1082780:CDS
GGACCATTACAAGATGATCA+AGG 0.615538 7_2:+82912203 Msa1082780:CDS
ATGTGCAGTTTGTGTTTGGA+GGG 0.615677 7_2:+82912354 Msa1082780:CDS
GCCGCACGTTTACGTCGGCA+TGG 0.617464 7_2:+82913844 Msa1082780:CDS
TTGAATCAACACATAAGCAC+AGG 0.617791 7_2:+82912525 Msa1082780:CDS
GAATATTTATAAAACGAACA+TGG 0.620125 7_2:+82915462 Msa1082780:three_prime_UTR
AGGTATCTAGTTCTCTCGTG+TGG 0.622875 7_2:+82910119 None:intergenic
ATGATGGTTCAAGGCGACAA+AGG 0.623404 7_2:+82912277 Msa1082780:CDS
AAGTCCAAACACGAGTCTGA+AGG 0.624220 7_2:+82913802 Msa1082780:CDS
AAGCCACAGAGCAGAATCAG+GGG 0.627092 7_2:-82915046 None:intergenic
TTCATTGTCCCCATAAAATG+GGG 0.627402 7_2:-82912622 None:intergenic
CATTACTTGAAGTTGGCTCA+CGG 0.627438 7_2:-82913612 None:intergenic
ATCGAAGACGTGGAGCGGAA+GGG 0.628788 7_2:-82910241 None:intergenic
ACTACCTGCTGGTCCATCGA+AGG 0.630114 7_2:+82914062 Msa1082780:CDS
ACCTTCAGAAGAGAAGTTGG+AGG 0.630190 7_2:+82914662 Msa1082780:CDS
CACTTTCCAAGAAAATGACG+GGG 0.631121 7_2:+82914491 Msa1082780:CDS
TTTATCTAATCAAAATAAGG+AGG 0.631516 7_2:+82914809 Msa1082780:CDS
CAGAAATTGAAACTCCAACA+GGG 0.633314 7_2:-82914146 None:intergenic
GTTCTGCAAAATTCACACAT+AGG 0.633688 7_2:-82912600 None:intergenic
CAGTGAATGCGACAAGATCG+AGG 0.637792 7_2:+82912245 Msa1082780:CDS
ATACTTGTCATATATGCCAA+AGG 0.640017 7_2:+82912673 Msa1082780:CDS
ACGATTGTTATTGCAATTAG+GGG 0.641201 7_2:-82910304 None:intergenic
AGCTATGCCCTAAAGCCTGA+CGG 0.643732 7_2:-82913732 None:intergenic
TCAATGATTGAGCATATGCG+TGG 0.644537 7_2:+82915488 Msa1082780:three_prime_UTR
GGAGTTGGGCTGCCTGTACG+AGG 0.647685 7_2:+82914990 Msa1082780:CDS
TGATTCAAACGGATTAACGA+TGG 0.648440 7_2:-82913674 None:intergenic
ACTTGTGCCGCAGAAACTGG+AGG 0.648801 7_2:-82914174 None:intergenic
TGAACATTCTCCACATTCAG+CGG 0.650353 7_2:-82914225 None:intergenic
AGGAATATAGGGCAGCTGAA+GGG 0.651781 7_2:+82912303 Msa1082780:CDS
CATCACCAAGGCGCACTCTG+AGG 0.652241 7_2:-82914875 None:intergenic
ATATCCTCATGGTACCAGTA+CGG 0.661958 7_2:-82912159 None:intergenic
TAAGAACTATGATGACCTTG+AGG 0.662578 7_2:+82912824 Msa1082780:CDS
ATATCTGCTCAATATCGCCA+AGG 0.662686 7_2:+82914327 Msa1082780:CDS
TTTAATTGCAGGCAGCACCC+GGG 0.666612 7_2:+82912786 Msa1082780:intron
CCGAAGCAGAACCATCACCA+AGG 0.667674 7_2:-82914887 None:intergenic
ACATTCTCCACATTCAGCGG+AGG 0.667936 7_2:-82914222 None:intergenic
CTGAATGATAGAATTCATGT+CGG 0.671549 7_2:+82915404 Msa1082780:three_prime_UTR
GTAAGTCATTAGATGTTAGG+CGG 0.674875 7_2:+82914571 Msa1082780:CDS
GGAAAGGAAGAGTCTACCAG+AGG 0.674976 7_2:-82913760 None:intergenic
AATGAACAGGATCAGCGCCG+TGG 0.675594 7_2:+82913496 Msa1082780:CDS
CCATGGCCGCACGTTTACGT+CGG 0.678172 7_2:+82913839 Msa1082780:CDS
ATGAAGACAGTAATTAACAG+TGG 0.678648 7_2:+82913979 Msa1082780:CDS
ATAATGCTACGGAACATGGA+GGG 0.682834 7_2:+82913268 Msa1082780:CDS
GCTATCTGCTAATCTCTCAG+TGG 0.687825 7_2:-82914601 None:intergenic
CATAATGCTACGGAACATGG+AGG 0.689083 7_2:+82913267 Msa1082780:CDS
AGGTTCATCTAGCAATACCA+TGG 0.693071 7_2:+82913822 Msa1082780:CDS
GGCTCTTGGAGATTATACAA+GGG 0.699064 7_2:+82912083 Msa1082780:intron
AAGCACAGGTGACTCCGACG+TGG 0.705911 7_2:+82912539 Msa1082780:CDS
GCCATGCCGACGTAAACGTG+CGG 0.707625 7_2:-82913845 None:intergenic
AATCAAAATAAGGAGGATGG+GGG 0.708920 7_2:+82914816 Msa1082780:CDS
ACTCTCACTTCCATCCACGT+CGG 0.716442 7_2:-82912553 None:intergenic
ACATATGCAACTTATGACGG+TGG 0.726710 7_2:-82912335 None:intergenic
TGGACCGTACTGGTACCATG+AGG 0.780655 7_2:+82912155 Msa1082780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CCATTTTAAAAAAATTATTA+TGG - chr7_2:82910771-82910790 None:intergenic 10.0%
!!! CCATAATAATTTTTTTAAAA+TGG + chr7_2:82910768-82910787 Msa1082780:intron 10.0%
!!! GAAGTTAAATATTTTCTTTA+CGG + chr7_2:82911754-82911773 Msa1082780:intron 15.0%
!!! TATTTTTTGAATGACAATTT+TGG + chr7_2:82912414-82912433 Msa1082780:intron 15.0%
!! TTGAAAAACAATAAATTTCT+TGG - chr7_2:82913015-82913034 None:intergenic 15.0%
!!! AATTTTTAATTTACCTTTGT+CGG - chr7_2:82914712-82914731 None:intergenic 15.0%
!!! AAATAATTGAATTTTTGCTT+AGG + chr7_2:82915128-82915147 Msa1082780:three_prime_UTR 15.0%
!!! TTAAAGAGAACGTTAAATTT+TGG + chr7_2:82911674-82911693 Msa1082780:intron 20.0%
!! ATAAAAAAACATCAATAGCA+GGG + chr7_2:82911988-82912007 Msa1082780:intron 20.0%
!!! AGGTTGAAATATTTATGTTT+TGG + chr7_2:82912382-82912401 Msa1082780:intron 20.0%
!!! TTTTCTGTTAATGGTTTATT+TGG + chr7_2:82913099-82913118 Msa1082780:intron 20.0%
!! AATGTATCTGTTATTAATTC+TGG + chr7_2:82913874-82913893 Msa1082780:CDS 20.0%
!! CAGTTTATCTAATCAAAATA+AGG + chr7_2:82914806-82914825 Msa1082780:CDS 20.0%
!! TTTATCTAATCAAAATAAGG+AGG + chr7_2:82914809-82914828 Msa1082780:CDS 20.0%
!! GAATATTTATAAAACGAACA+TGG + chr7_2:82915462-82915481 Msa1082780:three_prime_UTR 20.0%
!! AACGATTGTTATTGCAATTA+GGG - chr7_2:82910308-82910327 None:intergenic 25.0%
! AACAAAGATGAGATTACATT+CGG - chr7_2:82910517-82910536 None:intergenic 25.0%
! ACAGACACAAAATAATTTCA+TGG - chr7_2:82910581-82910600 None:intergenic 25.0%
! ATTCTAAGTGGTTAAATTCA+GGG - chr7_2:82910649-82910668 None:intergenic 25.0%
! TTGAAAACTAAAGTTAAGAC+GGG - chr7_2:82910710-82910729 None:intergenic 25.0%
! GTTGAAAACTAAAGTTAAGA+CGG - chr7_2:82910711-82910730 None:intergenic 25.0%
!!! TGGTTCATACTTAATTTGTT+AGG + chr7_2:82911143-82911162 Msa1082780:intron 25.0%
!!! GGTTCATACTTAATTTGTTA+GGG + chr7_2:82911144-82911163 Msa1082780:intron 25.0%
!!! TTTTTTGATGTGAAAACAAG+AGG - chr7_2:82911271-82911290 None:intergenic 25.0%
!!! ATTTTTGTGCTCTGAATTTA+AGG + chr7_2:82911424-82911443 Msa1082780:intron 25.0%
! TAAAATATGATCTGTGTCAA+TGG + chr7_2:82911450-82911469 Msa1082780:intron 25.0%
! GATAAAAAAACATCAATAGC+AGG + chr7_2:82911987-82912006 Msa1082780:intron 25.0%
!!! ATGTGGTTGATATTCAATTT+TGG + chr7_2:82912048-82912067 Msa1082780:intron 25.0%
! ATTGTCATTCAAAAAATACG+TGG - chr7_2:82912412-82912431 None:intergenic 25.0%
!! ATTAGCTTAATTGTTACCTT+TGG - chr7_2:82912692-82912711 None:intergenic 25.0%
! TTATAGTATTCAAATTGTCC+CGG - chr7_2:82912807-82912826 None:intergenic 25.0%
! AAACAATAAATTTCTTGGCA+AGG - chr7_2:82913010-82913029 None:intergenic 25.0%
!! TTCTTCATCTTTTCTGTTAA+TGG + chr7_2:82913090-82913109 Msa1082780:intron 25.0%
! ATATAGACACAATAATGAAC+AGG + chr7_2:82913483-82913502 Msa1082780:CDS 25.0%
! AATGGTAACAATAATGATTC+TGG + chr7_2:82914969-82914988 Msa1082780:CDS 25.0%
!! TAATTGAATTTTTGCTTAGG+AGG + chr7_2:82915131-82915150 Msa1082780:three_prime_UTR 25.0%
!!! GAATTTTTGGATTATACATG+CGG + chr7_2:82915510-82915529 Msa1082780:three_prime_UTR 25.0%
TCGTGTGGAAAATAAATAGT+AGG + chr7_2:82910134-82910153 Msa1082780:five_prime_UTR 30.0%
TGTGGAAAATAAATAGTAGG+AGG + chr7_2:82910137-82910156 Msa1082780:five_prime_UTR 30.0%
GTGGAAAATAAATAGTAGGA+GGG + chr7_2:82910138-82910157 Msa1082780:five_prime_UTR 30.0%
AAATAAATAGTAGGAGGGAT+TGG + chr7_2:82910143-82910162 Msa1082780:five_prime_UTR 30.0%
AATAAATAGTAGGAGGGATT+GGG + chr7_2:82910144-82910163 Msa1082780:five_prime_UTR 30.0%
! ACGATTGTTATTGCAATTAG+GGG - chr7_2:82910307-82910326 None:intergenic 30.0%
! GAACGATTGTTATTGCAATT+AGG - chr7_2:82910309-82910328 None:intergenic 30.0%
TAATCTCATCTTTGTTACCA+AGG + chr7_2:82910521-82910540 Msa1082780:CDS 30.0%
CACATAATCAACTCCATATA+TGG - chr7_2:82910608-82910627 None:intergenic 30.0%
GATTCTAAGTGGTTAAATTC+AGG - chr7_2:82910650-82910669 None:intergenic 30.0%
AGACCTATGTTTCTTATTGA+AGG - chr7_2:82910845-82910864 None:intergenic 30.0%
CAATATTCATGCTAGGAATT+AGG - chr7_2:82910904-82910923 None:intergenic 30.0%
CTAATTCCTAGCATGAATAT+TGG + chr7_2:82910902-82910921 Msa1082780:intron 30.0%
GAACTGATGTAATGAAGTTT+AGG + chr7_2:82910972-82910991 Msa1082780:intron 30.0%
ATTAAGTATGAACCAAGTCA+TGG - chr7_2:82911138-82911157 None:intergenic 30.0%
!! TTATAACCTGTTTGTTTCTG+TGG + chr7_2:82911178-82911197 Msa1082780:intron 30.0%
AAAAAAGCAATTTAGACGTG+CGG + chr7_2:82911285-82911304 Msa1082780:intron 30.0%
TTGTATCTGTTGCACAAATA+TGG + chr7_2:82911382-82911401 Msa1082780:intron 30.0%
TTGCAAACTAAAGTTAAGAC+AGG - chr7_2:82911524-82911543 None:intergenic 30.0%
GAATAATTTATATACAGCCC+AGG - chr7_2:82911551-82911570 None:intergenic 30.0%
! TTTGTTGCTATCTTTTGATG+TGG + chr7_2:82912031-82912050 Msa1082780:intron 30.0%
AAAATGCATTCATATCCTCA+TGG - chr7_2:82912173-82912192 None:intergenic 30.0%
GACAAAGGTTTAGGAATATA+GGG + chr7_2:82912292-82912311 Msa1082780:CDS 30.0%
TACCATCATTTCTATGACAT+AGG + chr7_2:82912464-82912483 Msa1082780:intron 30.0%
ATACTTGTCATATATGCCAA+AGG + chr7_2:82912673-82912692 Msa1082780:CDS 30.0%
TAATCAATCATGTGCTCAAT+AGG + chr7_2:82912708-82912727 Msa1082780:intron 30.0%
!! CAATAGGTGTTTCTTTGTTT+TGG + chr7_2:82912724-82912743 Msa1082780:intron 30.0%
TATATCTGTGCTTTAATTGC+AGG + chr7_2:82912775-82912794 Msa1082780:intron 30.0%
TATAGTATTCAAATTGTCCC+GGG - chr7_2:82912806-82912825 None:intergenic 30.0%
GACAAATATTTCTTACCTCA+AGG - chr7_2:82912842-82912861 None:intergenic 30.0%
!!! TCTTTTTTCGTCTGAAAGTA+AGG + chr7_2:82912874-82912893 Msa1082780:intron 30.0%
TTGACCTGATAGTATTTGTA+TGG + chr7_2:82912920-82912939 Msa1082780:intron 30.0%
TGACCTGATAGTATTTGTAT+GGG + chr7_2:82912921-82912940 Msa1082780:intron 30.0%
CACATAAGAAATGTTGTTGT+CGG - chr7_2:82912974-82912993 None:intergenic 30.0%
ACATTTCTTATGTGAAGATG+AGG + chr7_2:82912980-82912999 Msa1082780:CDS 30.0%
AACAGAAAAGATGAAGAAAC+AGG - chr7_2:82913088-82913107 None:intergenic 30.0%
CTGTTAATGGTTTATTTGGA+AGG + chr7_2:82913103-82913122 Msa1082780:intron 30.0%
ATGTCTCTATGTCATAAACA+AGG - chr7_2:82913250-82913269 None:intergenic 30.0%
AATGAAAGGTAACTTCTGTA+AGG - chr7_2:82913434-82913453 None:intergenic 30.0%
TGTCTATATCGAAAACTAGT+CGG - chr7_2:82913472-82913491 None:intergenic 30.0%
! TTCTGAAAATCAACTTTCCA+TGG + chr7_2:82913546-82913565 Msa1082780:CDS 30.0%
! TTATTAATTCTGGAAATGCC+TGG + chr7_2:82913884-82913903 Msa1082780:CDS 30.0%
ACAACAAAGTCTCAAAATTC+TGG + chr7_2:82913952-82913971 Msa1082780:CDS 30.0%
TGTTAATTACTGTCTTCATC+TGG - chr7_2:82913978-82913997 None:intergenic 30.0%
ATGAAGACAGTAATTAACAG+TGG + chr7_2:82913979-82913998 Msa1082780:CDS 30.0%
AACACTTTCCAAGAAAATGA+CGG + chr7_2:82914489-82914508 Msa1082780:CDS 30.0%
AAGGTAAGTCATTAGATGTT+AGG + chr7_2:82914568-82914587 Msa1082780:CDS 30.0%
TCTAATCAAAATAAGGAGGA+TGG + chr7_2:82914813-82914832 Msa1082780:CDS 30.0%
CTAATCAAAATAAGGAGGAT+GGG + chr7_2:82914814-82914833 Msa1082780:CDS 30.0%
TAATCAAAATAAGGAGGATG+GGG + chr7_2:82914815-82914834 Msa1082780:CDS 30.0%
!! TGAGTTTTCAAGATCTAGAA+GGG - chr7_2:82914913-82914932 None:intergenic 30.0%
!! TTGAGTTTTCAAGATCTAGA+AGG - chr7_2:82914914-82914933 None:intergenic 30.0%
TTCTAGATCTTGAAAACTCA+AGG + chr7_2:82914913-82914932 Msa1082780:CDS 30.0%
!! AACAATAATGATTCTGGAGT+TGG + chr7_2:82914975-82914994 Msa1082780:CDS 30.0%
!! ACAATAATGATTCTGGAGTT+GGG + chr7_2:82914976-82914995 Msa1082780:CDS 30.0%
TTGTAGAAACCACAGTTAAA+AGG + chr7_2:82915095-82915114 Msa1082780:three_prime_UTR 30.0%
TGTAGAAACCACAGTTAAAA+GGG + chr7_2:82915096-82915115 Msa1082780:three_prime_UTR 30.0%
!!! GAATTTTGTTGTTGTGTTGA+AGG + chr7_2:82915211-82915230 Msa1082780:three_prime_UTR 30.0%
TTCAAGTGTTCATATGAAAG+TGG + chr7_2:82915287-82915306 Msa1082780:three_prime_UTR 30.0%
TCAAGTGTTCATATGAAAGT+GGG + chr7_2:82915288-82915307 Msa1082780:three_prime_UTR 30.0%
CTGAATGATAGAATTCATGT+CGG + chr7_2:82915404-82915423 Msa1082780:three_prime_UTR 30.0%
TGATTGAAAAATCGAAGACG+TGG - chr7_2:82910254-82910273 None:intergenic 35.0%
AGGGGAAGAATGAATTTCTA+GGG - chr7_2:82910289-82910308 None:intergenic 35.0%
TAGGGGAAGAATGAATTTCT+AGG - chr7_2:82910290-82910309 None:intergenic 35.0%
AATCGTTCGTGATTTGATCT+GGG + chr7_2:82910321-82910340 Msa1082780:five_prime_UTR 35.0%
!! TTGATCTGGGCATTGAAATT+AGG + chr7_2:82910334-82910353 Msa1082780:five_prime_UTR 35.0%
!! TGATCTGGGCATTGAAATTA+GGG + chr7_2:82910335-82910354 Msa1082780:five_prime_UTR 35.0%
! TGGAATCGATAAGAAGCATA+GGG - chr7_2:82910561-82910580 None:intergenic 35.0%
! ATGGAATCGATAAGAAGCAT+AGG - chr7_2:82910562-82910581 None:intergenic 35.0%
!! TAAAGTTAAGACGGGTTGTT+GGG - chr7_2:82910702-82910721 None:intergenic 35.0%
TCTCTTCCAATATTCATGCT+AGG - chr7_2:82910911-82910930 None:intergenic 35.0%
TACTCACAAACTAACTGTCA+AGG - chr7_2:82911042-82911061 None:intergenic 35.0%
AGTTTGTGAGTAATGCATTC+AGG + chr7_2:82911050-82911069 Msa1082780:intron 35.0%
GAACCAATTTATCCATGACT+TGG + chr7_2:82911123-82911142 Msa1082780:intron 35.0%
GAACCAAGTCATGGATAAAT+TGG - chr7_2:82911129-82911148 None:intergenic 35.0%
TATTTGCCACAGAAACAAAC+AGG - chr7_2:82911187-82911206 None:intergenic 35.0%
!! TGTTTGTTTCTGTGGCAAAT+AGG + chr7_2:82911186-82911205 Msa1082780:intron 35.0%
TAAAAGTCTAATGCTGTGTC+TGG - chr7_2:82911331-82911350 None:intergenic 35.0%
CTGTGTTATATGCTGAAAAG+AGG + chr7_2:82911493-82911512 Msa1082780:intron 35.0%
TCGTTAAATTTCCCCTGTAA+AGG + chr7_2:82911586-82911605 Msa1082780:intron 35.0%
AGCACAAATGCAGAACAAAA+GGG - chr7_2:82911640-82911659 None:intergenic 35.0%
AAGCACAAATGCAGAACAAA+AGG - chr7_2:82911641-82911660 None:intergenic 35.0%
GAACTATTCCATTTGTGACT+TGG + chr7_2:82911852-82911871 Msa1082780:intron 35.0%
AGAAAAGACGTAGTCAAACT+TGG + chr7_2:82911886-82911905 Msa1082780:intron 35.0%
GTTCTCATTCTCACTTTGTT+AGG + chr7_2:82911917-82911936 Msa1082780:intron 35.0%
! TAGCCTTGATCATCTTGTAA+TGG - chr7_2:82912209-82912228 None:intergenic 35.0%
AGCAACAAAATGATGGTTCA+AGG + chr7_2:82912268-82912287 Msa1082780:CDS 35.0%
CGACAAAGGTTTAGGAATAT+AGG + chr7_2:82912291-82912310 Msa1082780:CDS 35.0%
TGCACATATGCAACTTATGA+CGG - chr7_2:82912341-82912360 None:intergenic 35.0%
CACCTATGTCATAGAAATGA+TGG - chr7_2:82912469-82912488 None:intergenic 35.0%
!! GCTTATGTGTTGATTCAACT+GGG - chr7_2:82912523-82912542 None:intergenic 35.0%
!! TGCTTATGTGTTGATTCAAC+TGG - chr7_2:82912524-82912543 None:intergenic 35.0%
TTGAATCAACACATAAGCAC+AGG + chr7_2:82912525-82912544 Msa1082780:CDS 35.0%
GTTCTGCAAAATTCACACAT+AGG - chr7_2:82912603-82912622 None:intergenic 35.0%
! TTTTGCAGAACCCCATTTTA+TGG + chr7_2:82912612-82912631 Msa1082780:CDS 35.0%
! TTTGCAGAACCCCATTTTAT+GGG + chr7_2:82912613-82912632 Msa1082780:CDS 35.0%
TTCATTGTCCCCATAAAATG+GGG - chr7_2:82912625-82912644 None:intergenic 35.0%
GTTCATTGTCCCCATAAAAT+GGG - chr7_2:82912626-82912645 None:intergenic 35.0%
AGTTCATTGTCCCCATAAAA+TGG - chr7_2:82912627-82912646 None:intergenic 35.0%
TAAGAACTATGATGACCTTG+AGG + chr7_2:82912824-82912843 Msa1082780:CDS 35.0%
TTGCCCATACAAATACTATC+AGG - chr7_2:82912927-82912946 None:intergenic 35.0%
TCAATCTGAATCAGAGATGA+AGG + chr7_2:82913031-82913050 Msa1082780:CDS 35.0%
ATTTCCCATGCATGTTCATT+TGG + chr7_2:82913158-82913177 Msa1082780:intron 35.0%
GACATAGAGACATAATGCTA+CGG + chr7_2:82913257-82913276 Msa1082780:intron 35.0%
! TAAGGTACTAAGAAGGATCA+TGG - chr7_2:82913416-82913435 None:intergenic 35.0%
! ACTTCTGTAAGGTACTAAGA+AGG - chr7_2:82913423-82913442 None:intergenic 35.0%
ATCTGTGAGGAAACAATGAA+AGG - chr7_2:82913448-82913467 None:intergenic 35.0%
!! TGATTCAAACGGATTAACGA+TGG - chr7_2:82913677-82913696 None:intergenic 35.0%
GCAGTAGCTAATGATTCAAA+CGG - chr7_2:82913688-82913707 None:intergenic 35.0%
! GTTGTCTTTTTAGATTGCGA+AGG - chr7_2:82913937-82913956 None:intergenic 35.0%
GAATTAGCAAAACTTGATGC+TGG - chr7_2:82914009-82914028 None:intergenic 35.0%
CAGAAATTGAAACTCCAACA+GGG - chr7_2:82914149-82914168 None:intergenic 35.0%
TCAGAAATTGAAACTCCAAC+AGG - chr7_2:82914150-82914169 None:intergenic 35.0%
! ACTACGAATCTTTTCAACCA+AGG - chr7_2:82914265-82914284 None:intergenic 35.0%
GATAGATACTGATGCATATG+TGG + chr7_2:82914353-82914372 Msa1082780:CDS 35.0%
ACACTTTCCAAGAAAATGAC+GGG + chr7_2:82914490-82914509 Msa1082780:CDS 35.0%
GACAAAAATGTCGACAAGAA+AGG + chr7_2:82914543-82914562 Msa1082780:CDS 35.0%
AATGTCGACAAGAAAGGTAA+AGG + chr7_2:82914549-82914568 Msa1082780:CDS 35.0%
GTAAGTCATTAGATGTTAGG+CGG + chr7_2:82914571-82914590 Msa1082780:CDS 35.0%
TAAACCTTCAGAAGAGAAGT+TGG + chr7_2:82914659-82914678 Msa1082780:CDS 35.0%
! CTAGAGTTTGTTTGAATCTG+CGG - chr7_2:82914738-82914757 None:intergenic 35.0%
AGTCAACATAAGACTAAGCT+TGG + chr7_2:82914759-82914778 Msa1082780:CDS 35.0%
AACATAAGACTAAGCTTGGT+GGG + chr7_2:82914763-82914782 Msa1082780:CDS 35.0%
AATCAAAATAAGGAGGATGG+GGG + chr7_2:82914816-82914835 Msa1082780:CDS 35.0%
TTTAAACTGTCTGTTGTTCC+AGG - chr7_2:82914951-82914970 None:intergenic 35.0%
GGAACAACAGACAGTTTAAA+TGG + chr7_2:82914951-82914970 Msa1082780:CDS 35.0%
AAAATCAGGCACACTTGAAT+TGG + chr7_2:82915071-82915090 Msa1082780:three_prime_UTR 35.0%
!! TGTTCAATCCCTTTTAACTG+TGG - chr7_2:82915107-82915126 None:intergenic 35.0%
CTTAGGAGGTAATCATTTCA+TGG + chr7_2:82915145-82915164 Msa1082780:three_prime_UTR 35.0%
ACAAAGCAAAACAGTACACT+TGG - chr7_2:82915316-82915335 None:intergenic 35.0%
! TGTTTTGCTTTGTACTCAAG+TGG + chr7_2:82915323-82915342 Msa1082780:three_prime_UTR 35.0%
ATGATAGAATTCATGTCGGT+TGG + chr7_2:82915408-82915427 Msa1082780:three_prime_UTR 35.0%
GATTTCTCTAGACTCATATC+AGG - chr7_2:82915437-82915456 None:intergenic 35.0%
! TTGGGTATGTTTGGTGAAAG+CGG + chr7_2:82910162-82910181 Msa1082780:intron 40.0%
CAATCGTTCGTGATTTGATC+TGG + chr7_2:82910320-82910339 Msa1082780:five_prime_UTR 40.0%
GGTTTGAAGAGAAGAAGACA+TGG + chr7_2:82910356-82910375 Msa1082780:exon 40.0%
! GAATCGATAAGAAGCATAGG+GGG - chr7_2:82910559-82910578 None:intergenic 40.0%
! GGAATCGATAAGAAGCATAG+GGG - chr7_2:82910560-82910579 None:intergenic 40.0%
TGTGTCTGTTGCACCATATA+TGG + chr7_2:82910592-82910611 Msa1082780:intron 40.0%
GACACAGATCAGATTCTAAG+TGG - chr7_2:82910661-82910680 None:intergenic 40.0%
!! CTAAAGTTAAGACGGGTTGT+TGG - chr7_2:82910703-82910722 None:intergenic 40.0%
! ATTCATTGCCATCGCTGTTT+TGG + chr7_2:82910795-82910814 Msa1082780:intron 40.0%
GCGCCTTCAATAAGAAACAT+AGG + chr7_2:82910839-82910858 Msa1082780:intron 40.0%
!! ACTTTAGTTTGCAACTGTCC+TGG + chr7_2:82911530-82911549 Msa1082780:intron 40.0%
!! CTTTAGTTTGCAACTGTCCT+GGG + chr7_2:82911531-82911550 Msa1082780:intron 40.0%
CAAATGCAGAACAAAAGGGT+GGG - chr7_2:82911636-82911655 None:intergenic 40.0%
ACAAATGCAGAACAAAAGGG+TGG - chr7_2:82911637-82911656 None:intergenic 40.0%
CATGTTCACCAAGTCACAAA+TGG - chr7_2:82911863-82911882 None:intergenic 40.0%
!! CATTTGTGACTTGGTGAACA+TGG + chr7_2:82911861-82911880 Msa1082780:intron 40.0%
!! CAATTTTGGTGTATACCGTC+AGG + chr7_2:82912062-82912081 Msa1082780:intron 40.0%
TATAATCTCCAAGAGCCTGA+CGG - chr7_2:82912080-82912099 None:intergenic 40.0%
AGGCTCTTGGAGATTATACA+AGG + chr7_2:82912082-82912101 Msa1082780:intron 40.0%
GGCTCTTGGAGATTATACAA+GGG + chr7_2:82912083-82912102 Msa1082780:intron 40.0%
ATATCCTCATGGTACCAGTA+CGG - chr7_2:82912162-82912181 None:intergenic 40.0%
!! GAATGCATTTTTCGATGACG+TGG + chr7_2:82912182-82912201 Msa1082780:CDS 40.0%
GGACCATTACAAGATGATCA+AGG + chr7_2:82912203-82912222 Msa1082780:CDS 40.0%
ATCGAGGAGCAACAAAATGA+TGG + chr7_2:82912261-82912280 Msa1082780:CDS 40.0%
ACATATGCAACTTATGACGG+TGG - chr7_2:82912338-82912357 None:intergenic 40.0%
GCATATGTGCAGTTTGTGTT+TGG + chr7_2:82912350-82912369 Msa1082780:CDS 40.0%
TATGTGCAGTTTGTGTTTGG+AGG + chr7_2:82912353-82912372 Msa1082780:CDS 40.0%
ATGTGCAGTTTGTGTTTGGA+GGG + chr7_2:82912354-82912373 Msa1082780:CDS 40.0%
!!! AGTGAGAGAGGTGGTTTTAT+GGG + chr7_2:82912573-82912592 Msa1082780:CDS 40.0%
! TTGCAGAACCCCATTTTATG+GGG + chr7_2:82912614-82912633 Msa1082780:CDS 40.0%
ACTGTACACACACATGTCTA+CGG + chr7_2:82912644-82912663 Msa1082780:CDS 40.0%
! GTCTGAAAGTAAGGCTTTGT+CGG + chr7_2:82912883-82912902 Msa1082780:intron 40.0%
AGAAATGTTGTTGTCGGAAG+TGG - chr7_2:82912968-82912987 None:intergenic 40.0%
TGACTGATTACTTACAGCAC+TGG + chr7_2:82913054-82913073 Msa1082780:intron 40.0%
GACTGATTACTTACAGCACT+GGG + chr7_2:82913055-82913074 Msa1082780:intron 40.0%
GCATCCAAATGAACATGCAT+GGG - chr7_2:82913165-82913184 None:intergenic 40.0%
AGCATCCAAATGAACATGCA+TGG - chr7_2:82913166-82913185 None:intergenic 40.0%
AGACATAATGCTACGGAACA+TGG + chr7_2:82913264-82913283 Msa1082780:CDS 40.0%
ATAATGCTACGGAACATGGA+GGG + chr7_2:82913268-82913287 Msa1082780:CDS 40.0%
TGCTCTTCAGGTATGTTCAA+TGG + chr7_2:82913317-82913336 Msa1082780:intron 40.0%
TACCAACAGACATGAGAAGT+GGG - chr7_2:82913361-82913380 None:intergenic 40.0%
ATACCAACAGACATGAGAAG+TGG - chr7_2:82913362-82913381 None:intergenic 40.0%
AAAACTAGTCGGTATCTGTG+AGG - chr7_2:82913461-82913480 None:intergenic 40.0%
AATGATCACGACGAAATGTC+CGG - chr7_2:82913528-82913547 None:intergenic 40.0%
! CATTACTTGAAGTTGGCTCA+CGG - chr7_2:82913615-82913634 None:intergenic 40.0%
GTGAGCCAACTTCAAGTAAT+GGG + chr7_2:82913614-82913633 Msa1082780:CDS 40.0%
ATTGGCCCATTACTTGAAGT+TGG - chr7_2:82913622-82913641 None:intergenic 40.0%
TCTCCGTCATCATAAGCAAT+TGG - chr7_2:82913640-82913659 None:intergenic 40.0%
ATCAACTTCAAGATACCGTC+AGG + chr7_2:82913717-82913736 Msa1082780:CDS 40.0%
AGGTTCATCTAGCAATACCA+TGG + chr7_2:82913822-82913841 Msa1082780:CDS 40.0%
TTAGATTGCGAAGGTTGTAC+AGG - chr7_2:82913928-82913947 None:intergenic 40.0%
! TGATTTTCCTCCAGTTTCTG+CGG + chr7_2:82914167-82914186 Msa1082780:CDS 40.0%
TGAACATTCTCCACATTCAG+CGG - chr7_2:82914228-82914247 None:intergenic 40.0%
! CTTTTCAACCAAGGACTTGT+TGG - chr7_2:82914256-82914275 None:intergenic 40.0%
ATATCTGCTCAATATCGCCA+AGG + chr7_2:82914327-82914346 Msa1082780:CDS 40.0%
!!! CTTTTGGAGTCTTACAATGC+TGG + chr7_2:82914456-82914475 Msa1082780:CDS 40.0%
CACTTTCCAAGAAAATGACG+GGG + chr7_2:82914491-82914510 Msa1082780:CDS 40.0%
!! CATAAACCCCGTCATTTTCT+TGG - chr7_2:82914500-82914519 None:intergenic 40.0%
! CAAGAAAATGACGGGGTTTA+TGG + chr7_2:82914498-82914517 Msa1082780:CDS 40.0%
! GACATTTTTGTCCTTGCGAT+GGG - chr7_2:82914535-82914554 None:intergenic 40.0%
!! AAGTTGGAGGTGCTATCAAA+GGG + chr7_2:82914675-82914694 Msa1082780:CDS 40.0%
CAACATAAGACTAAGCTTGG+TGG + chr7_2:82914762-82914781 Msa1082780:CDS 40.0%
! AGATTTCAAGTACAGCAAGC+TGG + chr7_2:82915183-82915202 Msa1082780:three_prime_UTR 40.0%
TGTTGAAGGCTGAATTCCAT+TGG + chr7_2:82915225-82915244 Msa1082780:three_prime_UTR 40.0%
! CTGAATTCCATTGGCTGAAT+GGG + chr7_2:82915234-82915253 Msa1082780:three_prime_UTR 40.0%
AAATCATCCCATTCAGCCAA+TGG - chr7_2:82915244-82915263 None:intergenic 40.0%
! TTGGCTGAATGGGATGATTT+TGG + chr7_2:82915244-82915263 Msa1082780:three_prime_UTR 40.0%
!! CTGAATGGGATGATTTTGGT+TGG + chr7_2:82915248-82915267 Msa1082780:three_prime_UTR 40.0%
!!! TGGGATGATTTTGGTTGGTT+TGG + chr7_2:82915253-82915272 Msa1082780:three_prime_UTR 40.0%
!!! GGGATGATTTTGGTTGGTTT+GGG + chr7_2:82915254-82915273 Msa1082780:three_prime_UTR 40.0%
!!! GGATGATTTTGGTTGGTTTG+GGG + chr7_2:82915255-82915274 Msa1082780:three_prime_UTR 40.0%
TCAATGATTGAGCATATGCG+TGG + chr7_2:82915488-82915507 Msa1082780:three_prime_UTR 40.0%
! GAGCATATGCGTGGAATTTT+TGG + chr7_2:82915497-82915516 Msa1082780:three_prime_UTR 40.0%
TAGGAGGGATTGGGTATGTT+TGG + chr7_2:82910153-82910172 Msa1082780:intron 45.0%
GAAAAATCGAAGACGTGGAG+CGG - chr7_2:82910249-82910268 None:intergenic 45.0%
! ATAAGAAGCATAGGGGGTAG+GGG - chr7_2:82910553-82910572 None:intergenic 45.0%
! GATAAGAAGCATAGGGGGTA+GGG - chr7_2:82910554-82910573 None:intergenic 45.0%
TGGCAAATAGGCATCAACTG+CGG + chr7_2:82911198-82911217 Msa1082780:intron 45.0%
AGATGATCAAGGCTATGTGC+AGG + chr7_2:82912214-82912233 Msa1082780:CDS 45.0%
ATGATGGTTCAAGGCGACAA+AGG + chr7_2:82912277-82912296 Msa1082780:CDS 45.0%
GTTCAAGGCGACAAAGGTTT+AGG + chr7_2:82912283-82912302 Msa1082780:CDS 45.0%
TAGGAATATAGGGCAGCTGA+AGG + chr7_2:82912302-82912321 Msa1082780:CDS 45.0%
AGGAATATAGGGCAGCTGAA+GGG + chr7_2:82912303-82912322 Msa1082780:CDS 45.0%
TTTGTGTTTGGAGGGAAGGA+AGG + chr7_2:82912362-82912381 Msa1082780:CDS 45.0%
!! GAGTGAGAGAGGTGGTTTTA+TGG + chr7_2:82912572-82912591 Msa1082780:CDS 45.0%
!!! GTGAGAGAGGTGGTTTTATG+GGG + chr7_2:82912574-82912593 Msa1082780:CDS 45.0%
TGCATGGGAAATCATCAAGC+AGG - chr7_2:82913150-82913169 None:intergenic 45.0%
CATAATGCTACGGAACATGG+AGG + chr7_2:82913267-82913286 Msa1082780:CDS 45.0%
AAAGCGTAATGCTGCTCTTC+AGG + chr7_2:82913305-82913324 Msa1082780:CDS 45.0%
AACCCACTTCTCATGTCTGT+TGG + chr7_2:82913356-82913375 Msa1082780:intron 45.0%
! AGTCTCCAAACTGGCTTCAA+TGG - chr7_2:82913572-82913591 None:intergenic 45.0%
AGCATTAGCAGTCTCCAAAC+TGG - chr7_2:82913581-82913600 None:intergenic 45.0%
CGTGAGCCAACTTCAAGTAA+TGG + chr7_2:82913613-82913632 Msa1082780:CDS 45.0%
GGGCCAATTGCTTATGATGA+CGG + chr7_2:82913634-82913653 Msa1082780:CDS 45.0%
TCAAGATACCGTCAGGCTTT+AGG + chr7_2:82913724-82913743 Msa1082780:CDS 45.0%
CAAGATACCGTCAGGCTTTA+GGG + chr7_2:82913725-82913744 Msa1082780:CDS 45.0%
! ACTCGTGTTTGGACTTTTCC+TGG - chr7_2:82913798-82913817 None:intergenic 45.0%
AAGTCCAAACACGAGTCTGA+AGG + chr7_2:82913802-82913821 Msa1082780:CDS 45.0%
TGAACCTTCAGACTCGTGTT+TGG - chr7_2:82913809-82913828 None:intergenic 45.0%
TTATCACGTGTGTCCTTCGA+TGG - chr7_2:82914078-82914097 None:intergenic 45.0%
TCGAAGGACACACGTGATAA+TGG + chr7_2:82914078-82914097 Msa1082780:CDS 45.0%
!! GGGTTGTTTTCAACGAGGTT+TGG - chr7_2:82914129-82914148 None:intergenic 45.0%
!! CAACAGGGTTGTTTTCAACG+AGG - chr7_2:82914134-82914153 None:intergenic 45.0%
CTCGTTGAAAACAACCCTGT+TGG + chr7_2:82914132-82914151 Msa1082780:CDS 45.0%
CATCAGTATCTATCGTGCCT+TGG - chr7_2:82914347-82914366 None:intergenic 45.0%
GTTTCATCTTGTACCTGAGC+TGG + chr7_2:82914398-82914417 Msa1082780:CDS 45.0%
! TCGGAAGCAGAGAGAACTTT+TGG + chr7_2:82914440-82914459 Msa1082780:CDS 45.0%
! CGACATTTTTGTCCTTGCGA+TGG - chr7_2:82914536-82914555 None:intergenic 45.0%
GCTATCTGCTAATCTCTCAG+TGG - chr7_2:82914604-82914623 None:intergenic 45.0%
ACCTTCAGAAGAGAAGTTGG+AGG + chr7_2:82914662-82914681 Msa1082780:CDS 45.0%
ACCTCCAACTTCTCTTCTGA+AGG - chr7_2:82914666-82914685 None:intergenic 45.0%
!! GAAGTTGGAGGTGCTATCAA+AGG + chr7_2:82914674-82914693 Msa1082780:CDS 45.0%
GGGCAGACTGAAACTTCAAA+TGG + chr7_2:82914783-82914802 Msa1082780:CDS 45.0%
TGTTGTTCCAGGATCAGAAG+TGG - chr7_2:82914940-82914959 None:intergenic 45.0%
AAAGCCACAGAGCAGAATCA+GGG - chr7_2:82915050-82915069 None:intergenic 45.0%
!! GCTCTGTGGCTTTGAAAATC+AGG + chr7_2:82915057-82915076 Msa1082780:three_prime_UTR 45.0%
! GCTGAATTCCATTGGCTGAA+TGG + chr7_2:82915233-82915252 Msa1082780:three_prime_UTR 45.0%
!!! CATTTTAAAAAAATTATTAT+GGG - chr7_2:82910770-82910789 None:intergenic 5.0%
! GGTATGTTTGGTGAAAGCGG+TGG + chr7_2:82910165-82910184 Msa1082780:intron 50.0%
CGCAACCCATTCCAATGGTT+CGG - chr7_2:82910403-82910422 None:intergenic 50.0%
!! CCATTGGAATGGGTTGCGTA+CGG + chr7_2:82910405-82910424 Msa1082780:CDS 50.0%
CAAACCTCGCGATGCAAACA+AGG - chr7_2:82910432-82910451 None:intergenic 50.0%
! CGATAAGAAGCATAGGGGGT+AGG - chr7_2:82910555-82910574 None:intergenic 50.0%
!!! TGCCATCGCTGTTTTGGTGT+CGG + chr7_2:82910801-82910820 Msa1082780:intron 50.0%
GTGTCGGACACTGACACATA+AGG + chr7_2:82910817-82910836 Msa1082780:intron 50.0%
AGGCATCAACTGCGGCAAAT+AGG + chr7_2:82911206-82911225 Msa1082780:intron 50.0%
GCAATTTAGACGTGCGGTTG+AGG + chr7_2:82911291-82911310 Msa1082780:intron 50.0%
AAGCGGCAGTAGCCTTTACA+GGG - chr7_2:82911601-82911620 None:intergenic 50.0%
AAAAGGGTGGGCAAGGATGA+GGG - chr7_2:82911624-82911643 None:intergenic 50.0%
CAGTGAATGCGACAAGATCG+AGG + chr7_2:82912245-82912264 Msa1082780:CDS 50.0%
GCAGTTTGTGTTTGGAGGGA+AGG + chr7_2:82912358-82912377 Msa1082780:CDS 50.0%
ACTCTCACTTCCATCCACGT+CGG - chr7_2:82912556-82912575 None:intergenic 50.0%
GATGGAAGTGAGAGTGAGAG+AGG + chr7_2:82912561-82912580 Msa1082780:CDS 50.0%
CTTTAATTGCAGGCAGCACC+CGG + chr7_2:82912785-82912804 Msa1082780:intron 50.0%
TTTAATTGCAGGCAGCACCC+GGG + chr7_2:82912786-82912805 Msa1082780:intron 50.0%
! AACATGGAGGGCGTATGTCA+CGG + chr7_2:82913280-82913299 Msa1082780:CDS 50.0%
! CAAACTGGCTTCAATGGCCA+TGG - chr7_2:82913566-82913585 None:intergenic 50.0%
CATGGCCATTGAAGCCAGTT+TGG + chr7_2:82913564-82913583 Msa1082780:CDS 50.0%
AGCTATGCCCTAAAGCCTGA+CGG - chr7_2:82913735-82913754 None:intergenic 50.0%
GGAAAGGAAGAGTCTACCAG+AGG - chr7_2:82913763-82913782 None:intergenic 50.0%
TCTTCCTTTCCTCCACTTCC+TGG + chr7_2:82913772-82913791 Msa1082780:CDS 50.0%
! TGTTTGGACTTTTCCTGGCC+AGG - chr7_2:82913793-82913812 None:intergenic 50.0%
GCTGCACATAGAACTGCTCA+TGG + chr7_2:82914036-82914055 Msa1082780:CDS 50.0%
GCTCATGGAAAACTACCTGC+TGG + chr7_2:82914051-82914070 Msa1082780:CDS 50.0%
ACATTCTCCACATTCAGCGG+AGG - chr7_2:82914225-82914244 None:intergenic 50.0%
TCAGTCTGCCAACAAGTCCT+TGG + chr7_2:82914245-82914264 Msa1082780:CDS 50.0%
CAAGACTATGCCCAGATGCT+CGG + chr7_2:82914421-82914440 Msa1082780:CDS 50.0%
CAAAATAAGGAGGATGGGGG+TGG + chr7_2:82914819-82914838 Msa1082780:CDS 50.0%
!! CCTTGGTGATGGTTCTGCTT+CGG + chr7_2:82914887-82914906 Msa1082780:CDS 50.0%
TCAAGGACCACTTCTGATCC+TGG + chr7_2:82914930-82914949 Msa1082780:CDS 50.0%
TTTCGCCAAACACCTCGTAC+AGG - chr7_2:82915005-82915024 None:intergenic 50.0%
! TGTACGAGGTGTTTGGCGAA+AGG + chr7_2:82915004-82915023 Msa1082780:CDS 50.0%
! GTACGAGGTGTTTGGCGAAA+GGG + chr7_2:82915005-82915024 Msa1082780:CDS 50.0%
! TACGAGGTGTTTGGCGAAAG+GGG + chr7_2:82915006-82915025 Msa1082780:CDS 50.0%
AAGCCACAGAGCAGAATCAG+GGG - chr7_2:82915049-82915068 None:intergenic 50.0%
CAAAGCCACAGAGCAGAATC+AGG - chr7_2:82915051-82915070 None:intergenic 50.0%
TCAAGTACAGCAAGCTGGCA+TGG + chr7_2:82915188-82915207 Msa1082780:three_prime_UTR 50.0%
CAAGTACAGCAAGCTGGCAT+GGG + chr7_2:82915189-82915208 Msa1082780:three_prime_UTR 50.0%
! TGTTTGGTGAAAGCGGTGGC+TGG + chr7_2:82910169-82910188 Msa1082780:intron 55.0%
ATCGAAGACGTGGAGCGGAA+GGG - chr7_2:82910244-82910263 None:intergenic 55.0%
AATCGAAGACGTGGAGCGGA+AGG - chr7_2:82910245-82910264 None:intergenic 55.0%
TCTGCGCCGAACCATTGGAA+TGG + chr7_2:82910394-82910413 Msa1082780:CDS 55.0%
CTGCGCCGAACCATTGGAAT+GGG + chr7_2:82910395-82910414 Msa1082780:CDS 55.0%
CCGTACGCAACCCATTCCAA+TGG - chr7_2:82910408-82910427 None:intergenic 55.0%
GTCCGACACCAAAACAGCGA+TGG - chr7_2:82910806-82910825 None:intergenic 55.0%
GCTGTGTCTGGTTGTGCGTT+TGG - chr7_2:82911319-82911338 None:intergenic 55.0%
AGCGGCAGTAGCCTTTACAG+GGG - chr7_2:82911600-82911619 None:intergenic 55.0%
GAAGCGGCAGTAGCCTTTAC+AGG - chr7_2:82911602-82911621 None:intergenic 55.0%
CAAAAGGGTGGGCAAGGATG+AGG - chr7_2:82911625-82911644 None:intergenic 55.0%
GCAGAACAAAAGGGTGGGCA+AGG - chr7_2:82911631-82911650 None:intergenic 55.0%
GGTGTATACCGTCAGGCTCT+TGG + chr7_2:82912069-82912088 Msa1082780:intron 55.0%
! CTTTTCATCCCTGCCGTCTG+AGG + chr7_2:82912116-82912135 Msa1082780:CDS 55.0%
TTCCCTTCCCTCACCTCAGA+CGG - chr7_2:82912132-82912151 None:intergenic 55.0%
AAGGGAAGGTTGGACCGTAC+TGG + chr7_2:82912145-82912164 Msa1082780:CDS 55.0%
! TGGACCGTACTGGTACCATG+AGG + chr7_2:82912155-82912174 Msa1082780:CDS 55.0%
GGAAGTGAGAGTGAGAGAGG+TGG + chr7_2:82912564-82912583 Msa1082780:CDS 55.0%
CGGAAGTGGATCTGCATCAG+AGG - chr7_2:82912954-82912973 None:intergenic 55.0%
AATGAACAGGATCAGCGCCG+TGG + chr7_2:82913496-82913515 Msa1082780:CDS 55.0%
GAAATGTCCGGCCTCTTCCA+CGG - chr7_2:82913516-82913535 None:intergenic 55.0%
!! AGGGCATAGCTCTAGACCTC+TGG + chr7_2:82913744-82913763 Msa1082780:CDS 55.0%
! TTTTCCTGGCCAGGAAGTGG+AGG - chr7_2:82913784-82913803 None:intergenic 55.0%
! GACTTTTCCTGGCCAGGAAG+TGG - chr7_2:82913787-82913806 None:intergenic 55.0%
!! TCCACGACTTGGTACAGACC+AGG - chr7_2:82913905-82913924 None:intergenic 55.0%
GGTTGTACAGGTCCACGACT+TGG - chr7_2:82913916-82913935 None:intergenic 55.0%
ACTACCTGCTGGTCCATCGA+AGG + chr7_2:82914062-82914081 Msa1082780:CDS 55.0%
ACTTGTGCCGCAGAAACTGG+AGG - chr7_2:82914177-82914196 None:intergenic 55.0%
CTCACTTGTGCCGCAGAAAC+TGG - chr7_2:82914180-82914199 None:intergenic 55.0%
! GTGGACTGTGTGCAGCAGTT+TGG + chr7_2:82914372-82914391 Msa1082780:CDS 55.0%
CTCTCTGCTTCCGAGCATCT+GGG - chr7_2:82914434-82914453 None:intergenic 55.0%
TCTCTCTGCTTCCGAGCATC+TGG - chr7_2:82914435-82914454 None:intergenic 55.0%
! GGTGCTTATCGCACCGACAA+AGG + chr7_2:82914696-82914715 Msa1082780:CDS 55.0%
AATAAGGAGGATGGGGGTGG+TGG + chr7_2:82914822-82914841 Msa1082780:CDS 55.0%
ATAAGGAGGATGGGGGTGGT+GGG + chr7_2:82914823-82914842 Msa1082780:CDS 55.0%
! AAGGCGCACTCTGAGGAACT+TGG - chr7_2:82914871-82914890 None:intergenic 55.0%
AAGTTCCTCAGAGTGCGCCT+TGG + chr7_2:82914870-82914889 Msa1082780:CDS 55.0%
CCGAAGCAGAACCATCACCA+AGG - chr7_2:82914890-82914909 None:intergenic 55.0%
! ACGAGGTGTTTGGCGAAAGG+GGG + chr7_2:82915007-82915026 Msa1082780:CDS 55.0%
CTTCCCCTGATTCTGCTCTG+TGG + chr7_2:82915043-82915062 Msa1082780:exon 55.0%
AAGACGTGGAGCGGAAGGGT+CGG - chr7_2:82910240-82910259 None:intergenic 60.0%
TGCTGTCTGCGCCGAACCAT+TGG + chr7_2:82910389-82910408 Msa1082780:CDS 60.0%
! CGGACCTTGTTTGCATCGCG+AGG + chr7_2:82910425-82910444 Msa1082780:CDS 60.0%
GAAACGAAGACGAGCGACGC+AGG - chr7_2:82910460-82910479 None:intergenic 60.0%
! TCCTGTGCTGCTATGCAGCG+CGG + chr7_2:82910733-82910752 Msa1082780:intron 60.0%
GTGGGCAAGGATGAGGGAAG+CGG - chr7_2:82911618-82911637 None:intergenic 60.0%
! ATCCCTGCCGTCTGAGGTGA+GGG + chr7_2:82912122-82912141 Msa1082780:CDS 60.0%
TTCCCTCACCTCAGACGGCA+GGG - chr7_2:82912127-82912146 None:intergenic 60.0%
! TGCCGTCTGAGGTGAGGGAA+GGG + chr7_2:82912127-82912146 Msa1082780:CDS 60.0%
! GTCTGAGGTGAGGGAAGGGA+AGG + chr7_2:82912131-82912150 Msa1082780:CDS 60.0%
GAGGTGAGGGAAGGGAAGGT+TGG + chr7_2:82912135-82912154 Msa1082780:CDS 60.0%
AAGCACAGGTGACTCCGACG+TGG + chr7_2:82912539-82912558 Msa1082780:CDS 60.0%
ACAGGTGACTCCGACGTGGA+TGG + chr7_2:82912543-82912562 Msa1082780:CDS 60.0%
CTGGCCAGGAAGTGGAGGAA+AGG - chr7_2:82913779-82913798 None:intergenic 60.0%
CTTTCCTCCACTTCCTGGCC+AGG + chr7_2:82913777-82913796 Msa1082780:CDS 60.0%
CCATGGCCGCACGTTTACGT+CGG + chr7_2:82913839-82913858 Msa1082780:CDS 60.0%
GCCATGCCGACGTAAACGTG+CGG - chr7_2:82913848-82913867 None:intergenic 60.0%
GCCTGGTCTGTACCAAGTCG+TGG + chr7_2:82913901-82913920 Msa1082780:CDS 60.0%
GTGTCCTTCGATGGACCAGC+AGG - chr7_2:82914069-82914088 None:intergenic 60.0%
! AGCGGAGGCTGGCTACTTGT+AGG - chr7_2:82914210-82914229 None:intergenic 60.0%
TAGCCAGCCTCCGCTGAATG+TGG + chr7_2:82914215-82914234 Msa1082780:CDS 60.0%
TCTCCACATTCAGCGGAGGC+TGG - chr7_2:82914221-82914240 None:intergenic 60.0%
! GGGCATAGTCTTGCCAGCTC+AGG - chr7_2:82914414-82914433 None:intergenic 60.0%
CATCACCAAGGCGCACTCTG+AGG - chr7_2:82914878-82914897 None:intergenic 60.0%
CTCAGAGTGCGCCTTGGTGA+TGG + chr7_2:82914876-82914895 Msa1082780:CDS 60.0%
! GGCTGCCTGTACGAGGTGTT+TGG + chr7_2:82914997-82915016 Msa1082780:CDS 60.0%
! CGAGGTGTTTGGCGAAAGGG+GGG + chr7_2:82915008-82915027 Msa1082780:CDS 60.0%
ACGAAGACGAGCGACGCAGG+TGG - chr7_2:82910457-82910476 None:intergenic 65.0%
GGGGGTAGGGGAGCAAACCT+TGG - chr7_2:82910541-82910560 None:intergenic 65.0%
TCCGCGCTGCATAGCAGCAC+AGG - chr7_2:82910737-82910756 None:intergenic 65.0%
GCTGCTATGCAGCGCGGACA+CGG + chr7_2:82910739-82910758 Msa1082780:intron 65.0%
! CATCCCTGCCGTCTGAGGTG+AGG + chr7_2:82912121-82912140 Msa1082780:CDS 65.0%
CTTCCCTCACCTCAGACGGC+AGG - chr7_2:82912128-82912147 None:intergenic 65.0%
! CTGCCGTCTGAGGTGAGGGA+AGG + chr7_2:82912126-82912145 Msa1082780:CDS 65.0%
CAGGATCAGCGCCGTGGAAG+AGG + chr7_2:82913502-82913521 Msa1082780:CDS 65.0%
ATCAGCGCCGTGGAAGAGGC+CGG + chr7_2:82913506-82913525 Msa1082780:CDS 65.0%
CCGACGTAAACGTGCGGCCA+TGG - chr7_2:82913842-82913861 None:intergenic 65.0%
GCCGCACGTTTACGTCGGCA+TGG + chr7_2:82913844-82913863 Msa1082780:CDS 65.0%
CAGCGCTAGCACCCATCGCA+AGG + chr7_2:82914521-82914540 Msa1082780:CDS 65.0%
GGAGTTGGGCTGCCTGTACG+AGG + chr7_2:82914990-82915009 Msa1082780:CDS 65.0%
GGTGTTTGGCGAAAGGGGGG+AGG + chr7_2:82915011-82915030 Msa1082780:CDS 65.0%
GCTATGCAGCGCGGACACGG+TGG + chr7_2:82910742-82910761 Msa1082780:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 82910128 82915540 82910128 ID=Msa1082780;Name=Msa1082780
chr7_2 mRNA 82910128 82915540 82910128 ID=Msa1082780-mRNA-1;Parent=Msa1082780;Name=Msa1082780-mRNA-1;_AED=0.06;_eAED=0.06;_QI=221|1|1|1|0.85|0.75|8|488|821
chr7_2 exon 82910128 82910165 82910128 ID=Msa1082780-mRNA-1:exon:21662;Parent=Msa1082780-mRNA-1
chr7_2 exon 82910192 82910542 82910192 ID=Msa1082780-mRNA-1:exon:21663;Parent=Msa1082780-mRNA-1
chr7_2 exon 82912084 82912383 82912084 ID=Msa1082780-mRNA-1:exon:21664;Parent=Msa1082780-mRNA-1
chr7_2 exon 82912486 82912694 82912486 ID=Msa1082780-mRNA-1:exon:21665;Parent=Msa1082780-mRNA-1
chr7_2 exon 82912797 82912845 82912797 ID=Msa1082780-mRNA-1:exon:21666;Parent=Msa1082780-mRNA-1
chr7_2 exon 82912963 82913052 82912963 ID=Msa1082780-mRNA-1:exon:21667;Parent=Msa1082780-mRNA-1
chr7_2 exon 82913264 82913326 82913264 ID=Msa1082780-mRNA-1:exon:21668;Parent=Msa1082780-mRNA-1
chr7_2 exon 82913466 82915540 82913466 ID=Msa1082780-mRNA-1:exon:21669;Parent=Msa1082780-mRNA-1
chr7_2 five_prime_UTR 82910128 82910165 82910128 ID=Msa1082780-mRNA-1:five_prime_utr;Parent=Msa1082780-mRNA-1
chr7_2 five_prime_UTR 82910192 82910374 82910192 ID=Msa1082780-mRNA-1:five_prime_utr;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82910375 82910542 82910375 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82912084 82912383 82912084 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82912486 82912694 82912486 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82912797 82912845 82912797 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82912963 82913052 82912963 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82913264 82913326 82913264 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 CDS 82913466 82915052 82913466 ID=Msa1082780-mRNA-1:cds;Parent=Msa1082780-mRNA-1
chr7_2 three_prime_UTR 82915053 82915540 82915053 ID=Msa1082780-mRNA-1:three_prime_utr;Parent=Msa1082780-mRNA-1
Gene Sequence

>Msa1082780

ATGGATGATTGTTGTGCTGTCTGCGCCGAACCATTGGAATGGGTTGCGTACGGACCTTGTTTGCATCGCGAGGTTTGCTCCACCTGCGTCGCTCGTCTTCGTTTCATTTGTGATGATCGACGTTGTTGCATCTGTAAGACCGAATGTAATCTCATCTTTGTTACCAAGGCTCTTGGAGATTATACAAGGGTGATCAATGACTTTTCATCCCTGCCGTCTGAGGTGAGGGAAGGGAAGGTTGGACCGTACTGGTACCATGAGGATATGAATGCATTTTTCGATGACGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTTTCTTGCAGTGAATGCGACAAGATCGAGGAGCAACAAAATGATGGTTCAAGGCGACAAAGGTTTAGGAATATAGGGCAGCTGAAGGGTCACTTATTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGTGTTTATATGTGAGCAAAAATTATATACTAGAGCCCAGTTGAATCAACACATAAGCACAGGTGACTCCGACGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTTTGCAGAACCCCATTTTATGGGGACAATGAACTGTACACACACATGTCTACGGAACATTATACTTGTCATATATGCCAAAGGCAGCACCCGGGACAATTTGAATACTATAAGAACTATGATGACCTTGAGATCCACTTCCGACAACAACATTTCTTATGTGAAGATGAGGCTTGCCTTGCCAAGAAATTTATTGTTTTTCAATCTGAATCAGAGATGAAGAGACATAATGCTACGGAACATGGAGGGCGTATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCGACTAGTTTTCGATATAGACACAATAATGAACAGGATCAGCGCCGTGGAAGAGGCCGGACATTTCGTCGTGATCATTCTGAAAATCAACTTTCCATGGCCATTGAAGCCAGTTTGGAGACTGCTAATGCTGAGCAGACATACCGTGAGCCAACTTCAAGTAATGGGCCAATTGCTTATGATGACGGAGATGCACATATTGATTCCATCGTTAATCCGTTTGAATCATTAGCTACTGCAGATTCTGAATCAACTTCAAGATACCGTCAGGCTTTAGGGCATAGCTCTAGACCTCTGGTAGACTCTTCCTTTCCTCCACTTCCTGGCCAGGAAAAGTCCAAACACGAGTCTGAAGGTTCATCTAGCAATACCATGGCCGCACGTTTACGTCGGCATGGCAACAGAAATGTATCTGTTATTAATTCTGGAAATGCCTGGTCTGTACCAAGTCGTGGACCTGTACAACCTTCGCAATCTAAAAAGACAACAAAGTCTCAAAATTCTGGCCAGATGAAGACAGTAATTAACAGTGGACTTCCAGCATCAAGTTTTGCTAATTCTATTCAAGCTGCACATAGAACTGCTCATGGAAAACTACCTGCTGGTCCATCGAAGGACACACGTGATAATGGAAAAATCGTTCACTCTGCATCAGCTCCAAACCTCGTTGAAAACAACCCTGTTGGAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCGGCACAAGTGAGCAAGTTACCTACAAGTAGCCAGCCTCCGCTGAATGTGGAGAATGTTCAGTCTGCCAACAAGTCCTTGGTTGAAAAGATTCGTAGTGCGCTTAATTTTGACGAAGATAGATATACTATATTTAAAGACATATCTGCTCAATATCGCCAAGGCACGATAGATACTGATGCATATGTGGACTGTGTGCAGCAGTTTGGCTTGTTTCATCTTGTACCTGAGCTGGCAAGACTATGCCCAGATGCTCGGAAGCAGAGAGAACTTTTGGAGTCTTACAATGCTGGTTTGCAAAGAAACACTTTCCAAGAAAATGACGGGGTTTATGGCAGCGCTAGCACCCATCGCAAGGACAAAAATGTCGACAAGAAAGGTAAAGGTAAGTCATTAGATGTTAGGCGGAGTAACTCCACTGAGAGATTAGCAGATAGCTTTTTAAGCACTGTTCATCAACTACAGTCAAGTTATAAACCTTCAGAAGAGAAGTTGGAGGTGCTATCAAAGGGTGCTTATCGCACCGACAAAGGTAAATTAAAAATTGAGCCGCAGATTCAAACAAACTCTAGCAGTCAACATAAGACTAAGCTTGGTGGGCAGACTGAAACTTCAAATGGCAGTTTATCTAATCAAAATAAGGAGGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAGCTTCCAAGTTCCTCAGAGTGCGCCTTGGTGATGGTTCTGCTTCGGCCCTTCTAGATCTTGAAAACTCAAGGACCACTTCTGATCCTGGAACAACAGACAGTTTAAATGGTAACAATAATGATTCTGGAGTTGGGCTGCCTGTACGAGGTGTTTGGCGAAAGGGGGGAGGTCAAAAACTCTTCCCCTGA
Protein sequence

>Msa1082780

MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTECNLIFVTKALGDYTRVINDFSSLPSEVREGKVGPYWYHEDMNAFFDDVDHYKMIKAMCRLSCSECDKIEEQQNDGSRRQRFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSDVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQFEYYKNYDDLEIHFRQQHFLCEDEACLAKKFIVFQSESEMKRHNATEHGGRMSRSKRNAALQIPTSFRYRHNNEQDQRRGRGRTFRRDHSENQLSMAIEASLETANAEQTYREPTSSNGPIAYDDGDAHIDSIVNPFESLATADSESTSRYRQALGHSSRPLVDSSFPPLPGQEKSKHESEGSSSNTMAARLRRHGNRNVSVINSGNAWSVPSRGPVQPSQSKKTTKSQNSGQMKTVINSGLPASSFANSIQAAHRTAHGKLPAGPSKDTRDNGKIVHSASAPNLVENNPVGVSISDFPPVSAAQVSKLPTSSQPPLNVENVQSANKSLVEKIRSALNFDEDRYTIFKDISAQYRQGTIDTDAYVDCVQQFGLFHLVPELARLCPDARKQRELLESYNAGLQRNTFQENDGVYGSASTHRKDKNVDKKGKGKSLDVRRSNSTERLADSFLSTVHQLQSSYKPSEEKLEVLSKGAYRTDKGKLKIEPQIQTNSSSQHKTKLGGQTETSNGSLSNQNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLENSRTTSDPGTTDSLNGNNNDSGVGLPVRGVWRKGGGQKLFP*