AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0693880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693880 MtrunA17_Chr4g0044551 99.336 1055 7 0 1 1055 1 1055 0.0 2145
Msa0693880 MtrunA17_Chr2g0286611 35.227 88 55 1 28 115 168 253 1.29e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693880 AT4G34100.2 77.353 1073 221 11 45 1110 48 1105 0.0 1680
Msa0693880 AT4G34100.1 76.887 1073 227 10 45 1110 48 1106 0.0 1668
Msa0693880 AT4G32670.2 30.700 557 349 9 518 1070 337 860 5.54e-76 269
Msa0693880 AT4G32670.2 29.448 326 189 9 44 368 8 293 5.21e-33 138
Msa0693880 AT4G32670.1 30.700 557 349 9 518 1070 337 860 5.54e-76 269
Msa0693880 AT4G32670.1 29.448 326 189 9 44 368 8 293 5.21e-33 138
Msa0693880 AT3G47550.1 33.663 101 57 3 23 119 24 118 1.70e-11 65.9
Msa0693880 AT3G47550.2 33.663 101 57 3 23 119 24 118 2.20e-11 65.9

Find 344 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTATCTGTTGCGGTTTA+TGG 0.101834 4_4:-63132595 Msa0693880:CDS
TTCCTATTAGTTATTGAATT+AGG 0.156552 4_4:-63132995 Msa0693880:CDS
CGATCTTGTTGATTTATATT+TGG 0.156811 4_4:+63129904 None:intergenic
TGCTACACCACTTCCAAATT+TGG 0.159186 4_4:+63131440 None:intergenic
TGCACCTTATAATCTCTTTA+TGG 0.160377 4_4:+63136160 None:intergenic
TGGGCTTCTCTTTGAGCTTT+TGG 0.169577 4_4:-63131248 Msa0693880:CDS
TCTCCAGGCTGCAGGGTCTT+TGG 0.171181 4_4:-63130257 Msa0693880:CDS
TTTAGGCATTTAAGAGAAAT+TGG 0.174412 4_4:-63134674 Msa0693880:CDS
TCCTATTAGTTATTGAATTA+GGG 0.229202 4_4:-63132994 Msa0693880:CDS
CTCCAGGCTGCAGGGTCTTT+GGG 0.231290 4_4:-63130256 Msa0693880:CDS
GACAATGGTAATCAAGAAAA+TGG 0.233183 4_4:-63132221 Msa0693880:CDS
AGAGGAAGGGGAAGAGGAGG+AGG 0.244114 4_4:+63135771 None:intergenic
GCCTTATATTTCTCAAGATA+TGG 0.247700 4_4:-63131156 Msa0693880:CDS
CTTTCATAACATTCTGGATA+TGG 0.251750 4_4:-63134850 Msa0693880:CDS
CACTTAATGCCATGAGTTAT+AGG 0.266226 4_4:+63131656 None:intergenic
TATATGGTCATGTGGGTTTA+TGG 0.267255 4_4:+63136050 None:intergenic
AATCTTTCTGCCTTTCTCAT+TGG 0.272421 4_4:-63133524 Msa0693880:CDS
TTTGCCATAAAGAGATTATA+AGG 0.276109 4_4:-63136164 Msa0693880:five_prime_UTR
TGTTATCTGTTGCGGTTTAT+GGG 0.282545 4_4:-63132594 Msa0693880:CDS
CGCATCGATCTCCTTTCCTT+TGG 0.285667 4_4:+63135726 None:intergenic
TCAAATCCCTTCTTCGCTAT+TGG 0.297044 4_4:-63132301 Msa0693880:CDS
ATTCCGGGATTGCCCTTGTT+TGG 0.297562 4_4:+63135991 None:intergenic
CGCCAACTTTCATCCATTAG+AGG 0.297935 4_4:+63130312 None:intergenic
CTTCTTTGAGAGATTACTTT+AGG 0.298635 4_4:-63134691 Msa0693880:CDS
AGGGGAAGAGGAGGAGGGTG+TGG 0.299524 4_4:+63135777 None:intergenic
TTATACCTTTCATAACATTC+TGG 0.304866 4_4:-63134856 Msa0693880:CDS
ATCTTTCTGCCTTTCTCATT+GGG 0.306827 4_4:-63133523 Msa0693880:CDS
ATCCGCATTGCAAGTTTAAC+TGG 0.309471 4_4:+63132544 None:intergenic
TTCCGGGATTGCCCTTGTTT+GGG 0.321094 4_4:+63135992 None:intergenic
TTTGGTTGAAAATGCATTTA+CGG 0.323117 4_4:-63134342 Msa0693880:intron
TAAACAGGTGAGAAGGAAAA+TGG 0.323156 4_4:+63135001 None:intergenic
TTTGAGAGGGTGAGAGATGA+TGG 0.325844 4_4:-63130282 Msa0693880:CDS
TTCTTCTGCTGGTCATTGCT+TGG 0.327923 4_4:-63131763 Msa0693880:CDS
AGCAAGCTCATTGGCTCATT+GGG 0.328335 4_4:-63132870 Msa0693880:CDS
GTGATCTGGACTGCTGTTGC+TGG 0.328384 4_4:-63131517 Msa0693880:CDS
AGAGGAAGAGGAAGGGGAAG+AGG 0.329013 4_4:+63135765 None:intergenic
GTCAATAGTTTCATTATGAT+TGG 0.330957 4_4:+63130213 None:intergenic
CAAGCTAATCGTAATGTTAA+TGG 0.332727 4_4:-63134581 Msa0693880:CDS
GTTTGCACCATACAGATGTT+TGG 0.342704 4_4:-63132938 Msa0693880:CDS
TAAATAATTTAGCTAATAGT+AGG 0.345872 4_4:-63129640 Msa0693880:three_prime_UTR
CCCCTAATTCAATAACTAAT+AGG 0.352335 4_4:+63132993 None:intergenic
TAGCAAGCTCATTGGCTCAT+TGG 0.354155 4_4:-63132871 Msa0693880:CDS
GTTATGTGTACCTTATGTTT+TGG 0.354946 4_4:-63130187 Msa0693880:CDS
GAGGGTGTGGTGGCGGCGAT+TGG 0.359481 4_4:+63135790 None:intergenic
GTGCCAAGAGATTTCATGTC+TGG 0.360708 4_4:-63130062 Msa0693880:CDS
TTGTCATCCCAGTGCTGATT+GGG 0.361144 4_4:-63131267 Msa0693880:CDS
TCCATATCTTGAGAAATATA+AGG 0.361508 4_4:+63131155 None:intergenic
CTCTTGAAAGGAGGGTCAAT+TGG 0.362634 4_4:-63133244 Msa0693880:CDS
AGTATCCTTCCCAGTGATAT+TGG 0.364976 4_4:+63131701 None:intergenic
TCACGGAATGGATTATAGTT+TGG 0.365748 4_4:+63132658 None:intergenic
TCATTGGCTCATTGGGTTGT+AGG 0.365816 4_4:-63132863 Msa0693880:CDS
TGCAGGGTCTTTGGGTCCTA+CGG 0.366377 4_4:-63130248 Msa0693880:CDS
CGCTATTGGTTTACAGCAGT+TGG 0.367808 4_4:-63132287 Msa0693880:CDS
GGAAGAGGAGGAGGGTGTGG+TGG 0.368546 4_4:+63135780 None:intergenic
CCAACGCACCACAAATTAAC+AGG 0.368603 4_4:+63129517 None:intergenic
AGACAATTCCATCTCTCTTC+AGG 0.368907 4_4:-63133066 Msa0693880:CDS
TTAGGCATTTAAGAGAAATT+GGG 0.368924 4_4:-63134673 Msa0693880:CDS
GAGGGTCAATTGGAACTTCC+AGG 0.369709 4_4:-63133234 Msa0693880:CDS
GGTAATCAAGAAAATGGAAA+TGG 0.370594 4_4:-63132215 Msa0693880:CDS
GGTGCAGCACAAGGAGTTGC+GGG 0.371201 4_4:-63134536 Msa0693880:CDS
CAGGGTATGGTTCCATTTGC+TGG 0.374030 4_4:-63132140 Msa0693880:CDS
CTTTATCAAGACTGGGCATT+GGG 0.374454 4_4:-63131178 Msa0693880:CDS
CGAGCCACCACCCACACATC+AGG 0.376387 4_4:+63132963 None:intergenic
GTAATCAAGAAAATGGAAAT+GGG 0.378500 4_4:-63132214 Msa0693880:CDS
ACAGCAGTTGGTTGGGCGCT+TGG 0.379216 4_4:-63132275 Msa0693880:CDS
CGAGGAACTCACTCAGAATC+AGG 0.379699 4_4:+63132056 None:intergenic
AAGCATGTTAGCTGGAATTT+CGG 0.383364 4_4:+63132379 None:intergenic
ACAAGCAGGGGTGCACGATC+AGG 0.384312 4_4:-63132159 Msa0693880:CDS
GATCTGTATGCCTTCATCAT+TGG 0.384697 4_4:-63131547 Msa0693880:CDS
TGATGGTTTCTCCAGGCTGC+AGG 0.385567 4_4:-63130265 Msa0693880:CDS
TTTGTACTTCCTTCGGGATC+CGG 0.386215 4_4:-63132686 Msa0693880:CDS
AGAGGAGGAGGGTGTGGTGG+CGG 0.387488 4_4:+63135783 None:intergenic
TGGTAGCGATGCGGTGTTAT+CGG 0.388548 4_4:-63133461 Msa0693880:CDS
TAATTCTTCATTATCTATCA+TGG 0.391548 4_4:-63133495 Msa0693880:CDS
AGAGGTGTGTTTCCAGCACT+TGG 0.391758 4_4:-63130162 Msa0693880:CDS
TATTCCTCCTTTATCAAGAC+TGG 0.396982 4_4:-63131186 Msa0693880:CDS
TGAACAGATGTTTGATGGTC+TGG 0.398397 4_4:-63134432 Msa0693880:CDS
ATATTTGTCAGCCTTCTTAG+AGG 0.400759 4_4:-63132815 Msa0693880:CDS
TTTGCACCATACAGATGTTT+GGG 0.402255 4_4:-63132937 Msa0693880:CDS
TCATTGGAAGTTATGTGATC+TGG 0.403756 4_4:-63131531 Msa0693880:CDS
TGGGAGTTTGATTGTTATGC+TGG 0.404265 4_4:-63132575 Msa0693880:CDS
TCTTGATAAAGGAGGAATAC+TGG 0.405833 4_4:+63131190 None:intergenic
ACTTCGCATTGTTCTTCTGC+TGG 0.406936 4_4:-63131774 Msa0693880:CDS
GTCTATCGATTTGCATGGTT+GGG 0.407664 4_4:-63130114 Msa0693880:CDS
ATTCTGACTGATTGCCTCCA+TGG 0.407876 4_4:-63134758 Msa0693880:CDS
AGAAGTTTCCTGTTAATTTG+TGG 0.409457 4_4:-63129525 Msa0693880:three_prime_UTR
GGAAGAGGAAGGGGAAGAGG+AGG 0.413121 4_4:+63135768 None:intergenic
CATTGGCTCATTGGGTTGTA+GGG 0.414825 4_4:-63132862 Msa0693880:CDS
TTGGTTGGTAATTTATGTTA+TGG 0.414914 4_4:+63136098 None:intergenic
TCATCCACCGGAACTCTCAT+TGG 0.418256 4_4:+63131217 None:intergenic
GTTCATTGATTAGGTTATGT+TGG 0.421290 4_4:-63130346 Msa0693880:intron
TTCTCCTTTAGCAAGCTCAT+TGG 0.424882 4_4:-63132879 Msa0693880:CDS
TTTGTCATCCCAGTGCTGAT+TGG 0.425479 4_4:-63131268 Msa0693880:CDS
TTCAAATCATCGCCAGCAAA+TGG 0.427675 4_4:+63132128 None:intergenic
CATGTTGAACAGATGTTTGA+TGG 0.428416 4_4:-63134437 Msa0693880:CDS
TCTAGGAAGTGTTCAGTCTC+TGG 0.429699 4_4:-63129800 Msa0693880:three_prime_UTR
AATGAAGCTGCAACTTCTAC+AGG 0.432112 4_4:-63129952 Msa0693880:CDS
TTGGTTTACAGCAGTTGGTT+GGG 0.435463 4_4:-63132282 Msa0693880:CDS
TCTCAAGATATGGACTAGAT+TGG 0.436470 4_4:-63131146 Msa0693880:intron
GGAGGGTTGTGATTTGTGTT+TGG 0.440008 4_4:+63136079 None:intergenic
CTGTAAACCAATAGCGAAGA+AGG 0.440125 4_4:+63132294 None:intergenic
CGTGATGACCGGTATCTGAT+TGG 0.441015 4_4:-63130015 Msa0693880:CDS
ATTGGTTTACAGCAGTTGGT+TGG 0.442356 4_4:-63132283 Msa0693880:CDS
AGACGAAGAGGAAGAGGAAG+GGG 0.442959 4_4:+63135759 None:intergenic
CCAATGCCCAGTCTTGATAA+AGG 0.443572 4_4:+63131179 None:intergenic
GGAGCATTCTCTGCATAAAC+AGG 0.443888 4_4:+63134986 None:intergenic
TCTTGATTACCATTGTCATC+AGG 0.446607 4_4:+63132227 None:intergenic
AGAATGCATGCTAAGATAGA+TGG 0.446821 4_4:-63129561 Msa0693880:three_prime_UTR
GGACCACATGATGCCTCTAA+TGG 0.447991 4_4:-63130325 Msa0693880:CDS
TCCTTACCCATATAGACAAA+AGG 0.453024 4_4:+63131398 None:intergenic
TGTCTATCGATTTGCATGGT+TGG 0.454226 4_4:-63130115 Msa0693880:CDS
AGTAGTAACATCAGAAATCC+TGG 0.457280 4_4:+63133216 None:intergenic
GGGCAGGTCAAGTAATTAGA+AGG 0.458120 4_4:-63134514 Msa0693880:CDS
TGTTCAGTCTCTGGCTGGCA+TGG 0.460400 4_4:-63129791 Msa0693880:three_prime_UTR
CCTTTATCAAGACTGGGCAT+TGG 0.460541 4_4:-63131179 Msa0693880:CDS
ATCCCAAACAAGGGCAATCC+CGG 0.460858 4_4:-63135994 Msa0693880:five_prime_UTR
AAATGGGGAGCGAGGTAGGC+AGG 0.461323 4_4:-63132198 Msa0693880:CDS
ACTTGTTGGCATGCAGGGTC+CGG 0.462784 4_4:-63134372 Msa0693880:CDS
GGACTCGGTCGCCGCGGACT+CGG 0.466286 4_4:-63135857 Msa0693880:five_prime_UTR
GATTTCTGATGTTACTACTT+TGG 0.467866 4_4:-63133212 Msa0693880:CDS
AAGAGAGAGAAAGAGAGAAA+TGG 0.468233 4_4:+63135917 None:intergenic
GGGTATTTCCCCTGATGTGT+GGG 0.468376 4_4:-63132973 Msa0693880:CDS
AGGATGTTTGCCGTATTTGT+CGG 0.471836 4_4:-63135636 Msa0693880:CDS
GTCTGAGTGAATTGTTTGTC+AGG 0.472018 4_4:-63129835 Msa0693880:exon
TCCAGCACTTGGGTACCCAT+TGG 0.472600 4_4:-63130151 Msa0693880:CDS
AGAGAGAAAGAGAGAAATGG+TGG 0.472760 4_4:+63135920 None:intergenic
TGATGAACTTGTTGGCATGC+AGG 0.474170 4_4:-63134378 Msa0693880:CDS
CGGGTTGCTAGGAGGCCTGC+TGG 0.475558 4_4:-63134605 Msa0693880:CDS
AAGTGGACAGAAATGGTGCC+CGG 0.477000 4_4:-63134625 Msa0693880:CDS
GCAGGGTCTTTGGGTCCTAC+GGG 0.477110 4_4:-63130247 Msa0693880:CDS
ACACCTCTGGCCAAAACATA+AGG 0.478364 4_4:+63130177 None:intergenic
ATTGAGGCACGTAAATCAAC+AGG 0.478520 4_4:-63129860 Msa0693880:CDS
AGCTATGGTAGGTTATGTTA+TGG 0.478627 4_4:+63136129 None:intergenic
GGATTATAGTTTGGATCAGC+CGG 0.479913 4_4:+63132667 None:intergenic
GGTTGTGATTTGTGTTTGGT+TGG 0.480877 4_4:+63136083 None:intergenic
TGCAACTTCTACAGGAGTGC+AGG 0.481879 4_4:-63129944 Msa0693880:CDS
ATCAAGATTGTCTCCTTCAG+TGG 0.482343 4_4:-63135546 Msa0693880:CDS
GCGTGGAGACGAAGAGGAAG+AGG 0.483146 4_4:+63135753 None:intergenic
AATGATTCAAGAATAACCTC+TGG 0.484324 4_4:+63134795 None:intergenic
AATGTTAATGGTGATGCAAA+TGG 0.485414 4_4:-63134569 Msa0693880:CDS
TCAAGAGTTTGTGGTGGGAA+TGG 0.485656 4_4:-63134948 Msa0693880:CDS
GTACCCTTTGATGAACTTGT+TGG 0.487335 4_4:-63134386 Msa0693880:CDS
GAAGATGAAGTGGACAGAAA+TGG 0.488415 4_4:-63134632 Msa0693880:CDS
CAATGCTTAGTAAAGAATTG+AGG 0.489500 4_4:-63129436 Msa0693880:three_prime_UTR
GAATTGTTTGTCAGGTAGGA+AGG 0.491726 4_4:-63129827 Msa0693880:three_prime_UTR
GGTAGTTGTACCAATATCAC+TGG 0.491978 4_4:-63131711 Msa0693880:CDS
CATTGTGCCAATGAGAGTTC+CGG 0.493623 4_4:-63131224 Msa0693880:CDS
AGCACTTGGGTACCCATTGG+TGG 0.494455 4_4:-63130148 Msa0693880:CDS
GCGTTAATTCGCTACACAAA+GGG 0.494571 4_4:-63133136 Msa0693880:CDS
TCGTCTCCACGCGGTTCCAA+AGG 0.495243 4_4:-63135742 Msa0693880:CDS
CCCACCACAAACTCTTGAAA+AGG 0.496004 4_4:+63134953 None:intergenic
GAAATGGTGCCCGGGTTGCT+AGG 0.496191 4_4:-63134616 Msa0693880:CDS
TTACCATTGTCATCAGGTCT+AGG 0.496643 4_4:+63132233 None:intergenic
GATGTTACTACTTTGGCAGT+TGG 0.498733 4_4:-63133205 Msa0693880:CDS
CTCCGAAGTTATGCAACCTC+CGG 0.500070 4_4:+63129992 None:intergenic
TTACGATTAGCTTGTCCAGC+AGG 0.500342 4_4:+63134590 None:intergenic
AAGAGAAGCCCAATCAGCAC+TGG 0.501798 4_4:+63131259 None:intergenic
ATTTAAGTAACATGCACAAA+CGG 0.502788 4_4:+63129658 None:intergenic
ATAAAGAGATTATAAGGTGC+AGG 0.502900 4_4:-63136158 Msa0693880:five_prime_UTR
TTAAAATGCTCAATAGCAAA+TGG 0.504195 4_4:+63132338 None:intergenic
GAGGAAGGGGAAGAGGAGGA+GGG 0.505373 4_4:+63135772 None:intergenic
GACCCAAAGACCCTGCAGCC+TGG 0.507054 4_4:+63130254 None:intergenic
CAGCAGGCCTCCTAGCAACC+CGG 0.507062 4_4:+63134606 None:intergenic
TGAAAGAGAAGCATGTTAGC+TGG 0.507863 4_4:+63132371 None:intergenic
CAAGATCGTGATGCAGATGT+TGG 0.510770 4_4:-63129889 Msa0693880:CDS
ACCAATGGGTACCCAAGTGC+TGG 0.511099 4_4:+63130150 None:intergenic
CTGAAAATGTTGCTGCGCGA+TGG 0.511230 4_4:-63134487 Msa0693880:CDS
CTGTGCACAAACATGCTCGC+AGG 0.512215 4_4:-63132621 Msa0693880:CDS
GGTCGCCGCGGACTCGGCGA+TGG 0.514249 4_4:-63135851 Msa0693880:exon
CAGATGTTGGACTTCGATTG+AGG 0.514689 4_4:-63129876 Msa0693880:CDS
CACATAACTTCCAATGATGA+AGG 0.514754 4_4:+63131537 None:intergenic
TATTTGTCAGCCTTCTTAGA+GGG 0.515008 4_4:-63132814 Msa0693880:CDS
CCTTGTCTTCAACTCTGCCC+TGG 0.515034 4_4:-63131732 Msa0693880:CDS
GATGAACTTGTTGGCATGCA+GGG 0.519507 4_4:-63134377 Msa0693880:CDS
TTCCCCTGATGTGTGGGTGG+TGG 0.520538 4_4:-63132967 Msa0693880:CDS
TCTTGAAAAGGCAACCTAGC+AGG 0.521442 4_4:+63134965 None:intergenic
AGTTATAGGAAGACGAGGAA+TGG 0.522267 4_4:+63131670 None:intergenic
CAATCGAGCAAATTAGAAAA+CGG 0.522531 4_4:-63131483 Msa0693880:CDS
CCTCGTCTTCCTATAACTCA+TGG 0.525560 4_4:-63131665 Msa0693880:CDS
CCTATTAGTTATTGAATTAG+GGG 0.526001 4_4:-63132993 Msa0693880:CDS
CACCAGGGTTCCGACAAATA+CGG 0.526229 4_4:+63135626 None:intergenic
AGACAATGCTTGCAGAAAGC+AGG 0.527346 4_4:+63134732 None:intergenic
TGTCTTCCCAAACATCTGTA+TGG 0.527439 4_4:+63132931 None:intergenic
GTTTCAGATGATCTCTTGAA+AGG 0.529271 4_4:-63133256 Msa0693880:CDS
AGAGTCACTAATGCAGATGC+TGG 0.529500 4_4:-63132104 Msa0693880:CDS
GAGACGAAGAGGAAGAGGAA+GGG 0.530191 4_4:+63135758 None:intergenic
CCTGTTAATTTGTGGTGCGT+TGG 0.530888 4_4:-63129517 Msa0693880:three_prime_UTR
TCAACTGCTACTCAAGAAAG+TGG 0.531342 4_4:-63133358 Msa0693880:CDS
GTGATATTGGTACAACTACC+AGG 0.531686 4_4:+63131714 None:intergenic
GATGGTTTCTCCAGGCTGCA+GGG 0.531938 4_4:-63130264 Msa0693880:CDS
AGGAAATTACCCCTCTAAGA+AGG 0.533857 4_4:+63132804 None:intergenic
GGAAGTGTTCAGTCTCTGGC+TGG 0.536458 4_4:-63129796 Msa0693880:three_prime_UTR
AGGGGTGCACGATCAGGGTA+TGG 0.536718 4_4:-63132153 Msa0693880:CDS
ATGCAGAGAATGCTCCTGCT+AGG 0.536815 4_4:-63134979 Msa0693880:CDS
TATAGTAGAGTATTGCATAC+AGG 0.540030 4_4:+63129746 None:intergenic
GGGAGCGAGGTAGGCAGGAA+AGG 0.540221 4_4:-63132193 Msa0693880:CDS
ACAGCAGAATTGACCACCAA+TGG 0.542480 4_4:+63130135 None:intergenic
TGAGAGATGATGGTTTCTCC+AGG 0.544493 4_4:-63130272 Msa0693880:CDS
TATTTCCCCTGATGTGTGGG+TGG 0.544656 4_4:-63132970 Msa0693880:CDS
ATTATGCGACCCAATGAGAA+AGG 0.544766 4_4:+63133514 None:intergenic
GAACCAGACATGAAATCTCT+TGG 0.545546 4_4:+63130059 None:intergenic
TGTTGAACCAAATTTGGAAG+TGG 0.546731 4_4:-63131447 Msa0693880:CDS
ATTGGAGTTCCGTCGAGAGA+AGG 0.548088 4_4:+63135808 None:intergenic
GGGGTATTTCCCCTGATGTG+TGG 0.548809 4_4:-63132974 Msa0693880:CDS
CTGCGAGCATGTTTGTGCAC+AGG 0.549091 4_4:+63132622 None:intergenic
ATGGAAATGGGGAGCGAGGT+AGG 0.550188 4_4:-63132202 Msa0693880:CDS
AACGGATTATCAGCATCACC+AGG 0.550685 4_4:+63135610 None:intergenic
CAGATGATCTCTTGAAAGGA+GGG 0.550858 4_4:-63133252 Msa0693880:CDS
ACGTGTGTTGGTGACGTATA+TGG 0.551034 4_4:+63136034 None:intergenic
TGAGCCAATGAGCTTGCTAA+AGG 0.551517 4_4:+63132875 None:intergenic
GGCCGGAGGTTGCATAACTT+CGG 0.552041 4_4:-63129994 Msa0693880:CDS
CTGCTGTCTATCGATTTGCA+TGG 0.552900 4_4:-63130119 Msa0693880:CDS
TTGGCGAGTAAAGTTTGAGA+GGG 0.553067 4_4:-63130295 Msa0693880:CDS
TGGTGCAGCACAAGGAGTTG+CGG 0.553517 4_4:-63134537 Msa0693880:CDS
TAGGCATTTAAGAGAAATTG+GGG 0.553875 4_4:-63134672 Msa0693880:CDS
CAGCAGAATTGACCACCAAT+GGG 0.553975 4_4:+63130136 None:intergenic
AGATTATAAGGTGCAGGCAA+TGG 0.554650 4_4:-63136152 Msa0693880:five_prime_UTR
GAGTGAATTGTTTGTCAGGT+AGG 0.555543 4_4:-63129831 Msa0693880:three_prime_UTR
CATGCCAACAAGTTCATCAA+AGG 0.555700 4_4:+63134382 None:intergenic
GGAGACGAAGAGGAAGAGGA+AGG 0.556513 4_4:+63135757 None:intergenic
TAAAATCTTCCTGCAGTCAA+AGG 0.556613 4_4:+63133109 None:intergenic
ACAATTCAATTCGTGATGAC+CGG 0.559314 4_4:-63130026 Msa0693880:CDS
TGGGTTTATGGTGACGTGGA+GGG 0.559341 4_4:+63136062 None:intergenic
CCTTACCCATATAGACAAAA+GGG 0.559557 4_4:+63131399 None:intergenic
AAGTGCTGGAAACACACCTC+TGG 0.559718 4_4:+63130164 None:intergenic
CTCTGCATAAACAGGTGAGA+AGG 0.560051 4_4:+63134994 None:intergenic
CACTAATGCAGATGCTGGAG+AGG 0.562098 4_4:-63132099 Msa0693880:CDS
GAAAGAGAAGTGTCTGTAGG+TGG 0.563881 4_4:+63133430 None:intergenic
CCAGCTTACAATATTTCAAG+TGG 0.564399 4_4:+63132505 None:intergenic
ATTCTTGAATCATTTATCAA+CGG 0.564982 4_4:-63134786 Msa0693880:CDS
TCATAACATTCTGGATATGG+AGG 0.565352 4_4:-63134847 Msa0693880:CDS
GAGGTGTGTTTCCAGCACTT+GGG 0.565419 4_4:-63130161 Msa0693880:CDS
AGGTTACAGATAGTACAAGC+AGG 0.566388 4_4:-63132173 Msa0693880:CDS
CGGTATCCGTGCGCGTGTAG+CGG 0.566435 4_4:-63135586 Msa0693880:CDS
TGCCGTATTTGTCGGAACCC+TGG 0.569453 4_4:-63135628 Msa0693880:CDS
TCAGATGATCTCTTGAAAGG+AGG 0.571864 4_4:-63133253 Msa0693880:CDS
CGTAATATAAATCCCAAACA+AGG 0.573064 4_4:-63136004 Msa0693880:five_prime_UTR
GTCCGCGGCGACCGAGTCCG+TGG 0.573463 4_4:+63135861 None:intergenic
AAGGGTGAACCTTTGACTGC+AGG 0.575135 4_4:-63133118 Msa0693880:CDS
ATTCCTCCTTTATCAAGACT+GGG 0.575230 4_4:-63131185 Msa0693880:CDS
ACTCAAGAAAGTGGATCAGT+TGG 0.575644 4_4:-63133349 Msa0693880:CDS
ACCTCCGGCCAATCAGATAC+CGG 0.575902 4_4:+63130007 None:intergenic
CCAGGGCAGAGTTGAAGACA+AGG 0.576280 4_4:+63131732 None:intergenic
TTAGCTGGAATTTCGGTGAA+GGG 0.577394 4_4:+63132386 None:intergenic
GAAGATGCTGGTGCAGCACA+AGG 0.577486 4_4:-63134545 Msa0693880:CDS
TGAAAATGTTGCTGCGCGAT+GGG 0.578626 4_4:-63134486 Msa0693880:CDS
TGACGACGATGAAGATGAAG+AGG 0.579648 4_4:-63135656 Msa0693880:CDS
ATGACCGGTATCTGATTGGC+CGG 0.580036 4_4:-63130011 Msa0693880:CDS
AAAAGAGAGGGGTTGCCGTA+GGG 0.580445 4_4:+63135958 None:intergenic
CAAGCAGGGGTGCACGATCA+GGG 0.582414 4_4:-63132158 Msa0693880:CDS
GTTGGCGAGTAAAGTTTGAG+AGG 0.584638 4_4:-63130296 Msa0693880:CDS
ACTCATGGCATTAAGTGCAA+TGG 0.584649 4_4:-63131650 Msa0693880:intron
GTGCAGCACAAGGAGTTGCG+GGG 0.585709 4_4:-63134535 Msa0693880:CDS
ATGATTCAAGAATAACCTCT+GGG 0.587470 4_4:+63134796 None:intergenic
TGGTGACGTATATGGTCATG+TGG 0.588278 4_4:+63136042 None:intergenic
TCAGGTAGGAAGGAATCTCT+AGG 0.588292 4_4:-63129817 Msa0693880:three_prime_UTR
GTGATGCTGATAATCCGTTA+CGG 0.589189 4_4:-63135606 Msa0693880:CDS
GTGGGTTTATGGTGACGTGG+AGG 0.589474 4_4:+63136061 None:intergenic
AAAGGAGATCGATGCGGATG+CGG 0.589476 4_4:-63135719 Msa0693880:CDS
CATATCCAGAATGTTATGAA+AGG 0.590021 4_4:+63134851 None:intergenic
TGCGGATAGAGAAGATGAAG+TGG 0.590427 4_4:-63134642 Msa0693880:CDS
TCCACGCGGTTCCAAAGGAA+AGG 0.591443 4_4:-63135737 Msa0693880:CDS
GAGAGAAAGAGAGAAATGGT+GGG 0.592358 4_4:+63135921 None:intergenic
AGTTAAACTTGCAATGCGGA+TGG 0.593883 4_4:-63132542 Msa0693880:CDS
AAGAACAATGCGAAGTGCAA+AGG 0.595024 4_4:+63131781 None:intergenic
AGCAGGCCTCCTAGCAACCC+GGG 0.595777 4_4:+63134607 None:intergenic
GATGCAAGCAGCACGTCTCG+AGG 0.597618 4_4:-63134462 Msa0693880:CDS
ATGCCAACAAGTTCATCAAA+GGG 0.597789 4_4:+63134383 None:intergenic
TGCGTTAATTCGCTACACAA+AGG 0.598094 4_4:-63133137 Msa0693880:CDS
TGCTATGATTAAGCCACTGA+AGG 0.598864 4_4:+63135533 None:intergenic
TGCCTCTAATGGATGAAAGT+TGG 0.598881 4_4:-63130314 Msa0693880:CDS
GAACCACCGCCTTCTCTCGA+CGG 0.602943 4_4:-63135817 Msa0693880:CDS
GTTAGCTGGAATTTCGGTGA+AGG 0.603257 4_4:+63132385 None:intergenic
TTTGATGACCATGGTGAAGG+TGG 0.603390 4_4:-63133020 Msa0693880:CDS
GCAGAAAGATTACAACTCCA+AGG 0.604007 4_4:+63133536 None:intergenic
ATTTGTCAGCCTTCTTAGAG+GGG 0.607588 4_4:-63132813 Msa0693880:intron
GAGCCACCACCCACACATCA+GGG 0.608319 4_4:+63132964 None:intergenic
GATCTCCATCGCCGAGTCCG+CGG 0.613410 4_4:+63135846 None:intergenic
GATGGTCTGGATGACGCTGA+TGG 0.613749 4_4:-63134419 Msa0693880:CDS
TGTGCACAAACATGCTCGCA+GGG 0.613764 4_4:-63132620 Msa0693880:CDS
AAAGAGAAGTGTCTGTAGGT+GGG 0.614507 4_4:+63133431 None:intergenic
AGAGAAGCCCAATCAGCACT+GGG 0.614681 4_4:+63131260 None:intergenic
TCCTTTCCTTTGGAACCGCG+TGG 0.616101 4_4:+63135736 None:intergenic
AACACACGAAACTGAAAGAG+AGG 0.616372 4_4:+63130088 None:intergenic
TAGCAACGCTCGTCAATGCG+AGG 0.617597 4_4:-63135515 Msa0693880:intron
GGTTACAGATAGTACAAGCA+GGG 0.617742 4_4:-63132172 Msa0693880:CDS
TTGTACCAATATCACTGGGA+AGG 0.623748 4_4:-63131706 Msa0693880:CDS
TGCAGCACAAGGAGTTGCGG+GGG 0.623891 4_4:-63134534 Msa0693880:CDS
TCATCTATCAGATCACGGAA+TGG 0.626890 4_4:+63132646 None:intergenic
CACGCGCACGGATACCGTAA+CGG 0.628074 4_4:+63135592 None:intergenic
AATACTGGACTTTCATCCAC+CGG 0.628533 4_4:+63131205 None:intergenic
GATGCAAATGGAGAAGATGC+TGG 0.629822 4_4:-63134557 Msa0693880:CDS
TTGGATCAGCCGGATCCCGA+AGG 0.630237 4_4:+63132677 None:intergenic
CAGGATCATCTATCAGATCA+CGG 0.631398 4_4:+63132641 None:intergenic
CCATGAGTTATAGGAAGACG+AGG 0.632867 4_4:+63131665 None:intergenic
ATGGTGCCCGGGTTGCTAGG+AGG 0.633326 4_4:-63134613 Msa0693880:CDS
AGGGAAAGAGAAGTGTCTGT+AGG 0.633562 4_4:+63133427 None:intergenic
CTTGAATCATTTATCAACGG+CGG 0.633577 4_4:-63134783 Msa0693880:CDS
GGAATAACATAAAATCCCTA+CGG 0.634285 4_4:-63135973 Msa0693880:five_prime_UTR
TGTAAACCAATAGCGAAGAA+GGG 0.635191 4_4:+63132295 None:intergenic
CATGTGGGTTTATGGTGACG+TGG 0.637312 4_4:+63136058 None:intergenic
TGGATGATGATAGCTATGGT+AGG 0.640314 4_4:+63136118 None:intergenic
ACAGATGTTTGGGAAGACAA+TGG 0.641253 4_4:-63132927 Msa0693880:CDS
GGTCATCACGAATTGAATTG+TGG 0.642672 4_4:+63130028 None:intergenic
TGGCGGTGCTGTCGATGCGG+TGG 0.644576 4_4:+63135693 None:intergenic
ACCGGTATCTGATTGGCCGG+AGG 0.647436 4_4:-63130008 Msa0693880:CDS
AGCAGAAAATTAGAGTCGAT+AGG 0.647688 4_4:+63133173 None:intergenic
GAAAATGGAAATGGGGAGCG+AGG 0.648990 4_4:-63132206 Msa0693880:CDS
GCATTTGATGACCATGGTGA+AGG 0.649658 4_4:-63133023 Msa0693880:CDS
GGAGTTCCGTCGAGAGAAGG+CGG 0.650193 4_4:+63135811 None:intergenic
TTGCAGAAAGCAGGAAACCA+TGG 0.651313 4_4:+63134741 None:intergenic
TAATCAAGAAAATGGAAATG+GGG 0.652387 4_4:-63132213 Msa0693880:CDS
GTTATGGATGATGATAGCTA+TGG 0.652843 4_4:+63136114 None:intergenic
CTCCACGGACTCGGTCGCCG+CGG 0.653033 4_4:-63135863 Msa0693880:five_prime_UTR
TTGCCTAGACCTGATGACAA+TGG 0.653839 4_4:-63132236 Msa0693880:CDS
GGAACCGCGTGGAGACGAAG+AGG 0.655389 4_4:+63135747 None:intergenic
GTTCCGTCGAGAGAAGGCGG+TGG 0.655449 4_4:+63135814 None:intergenic
CATCCATTAGAGGCATCATG+TGG 0.655656 4_4:+63130322 None:intergenic
AGCCACCACCCACACATCAG+GGG 0.658349 4_4:+63132965 None:intergenic
TTACGCGTGTGTACGTGTGT+TGG 0.660204 4_4:+63136022 None:intergenic
AGTGGACAGAAATGGTGCCC+GGG 0.663742 4_4:-63134624 Msa0693880:CDS
TGTGCCAATGAGAGTTCCGG+TGG 0.678961 4_4:-63131221 Msa0693880:CDS
GTAGTTGTACCAATATCACT+GGG 0.680967 4_4:-63131710 Msa0693880:CDS
GGATGACGCTGATGGAGCAG+AGG 0.682504 4_4:-63134411 Msa0693880:CDS
ATACTGCCGCTACACGCGCA+CGG 0.683557 4_4:+63135580 None:intergenic
GTAATATAAATCCCAAACAA+GGG 0.686248 4_4:-63136003 Msa0693880:five_prime_UTR
GGTGACGTATATGGTCATGT+GGG 0.686662 4_4:+63136043 None:intergenic
ATGCCCAGTCTTGATAAAGG+AGG 0.687851 4_4:+63131182 None:intergenic
TAGGAAAGCCACCTTCACCA+TGG 0.688671 4_4:+63133012 None:intergenic
TAGCGATGCGGTGTTATCGG+TGG 0.691377 4_4:-63133458 Msa0693880:CDS
GGAGTTTCGGTGAAGCCCAG+AGG 0.696626 4_4:-63134811 Msa0693880:CDS
TTGGAAGAACAATCTCCCGT+AGG 0.698657 4_4:+63130232 None:intergenic
TGCCAGTTAAACTTGCAATG+CGG 0.699649 4_4:-63132546 Msa0693880:CDS
TGATATTGGTACAACTACCA+GGG 0.700682 4_4:+63131715 None:intergenic
TCGAGCAAATTAGAAAACGG+AGG 0.702540 4_4:-63131480 Msa0693880:CDS
AGGCATTTAAGAGAAATTGG+GGG 0.705875 4_4:-63134671 Msa0693880:CDS
ACGGATTATCAGCATCACCA+GGG 0.710347 4_4:+63135611 None:intergenic
CAGAAAGCAGGAAACCATGG+AGG 0.712468 4_4:+63134744 None:intergenic
AATGAGGCATTTGATGACCA+TGG 0.713027 4_4:-63133029 Msa0693880:CDS
GAGGCACGTAAATCAACAGG+CGG 0.720143 4_4:-63129857 Msa0693880:CDS
GTTACAGATAGTACAAGCAG+GGG 0.720717 4_4:-63132171 Msa0693880:CDS
TCTTCCTCTTCGTCTCCACG+CGG 0.721480 4_4:-63135751 Msa0693880:CDS
CAAAGGAAAGGAGATCGATG+CGG 0.735593 4_4:-63135725 Msa0693880:CDS
AGATGGCGGTGCTGTCGATG+CGG 0.748320 4_4:+63135690 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTTTTTTTTATTTT+TGG - chr4_4:63136025-63136044 Msa0693880:five_prime_UTR 0.0%
!!! ATTTTTTATTGAATTTTTTG+TGG - chr4_4:63130193-63130212 Msa0693880:CDS 10.0%
!! ATAATAATTTAACGAAAATT+TGG - chr4_4:63130316-63130335 Msa0693880:CDS 10.0%
!! AAAAAAATCATATGTTTAAA+AGG + chr4_4:63131514-63131533 None:intergenic 10.0%
!!! TTCGTTTTTTTTTTTTTTTT+TGG - chr4_4:63134318-63134337 Msa0693880:intron 10.0%
!!! TGCATTTTTTAATGTAATAT+TGG + chr4_4:63132219-63132238 None:intergenic 15.0%
!! TAAAATCCTATAACTATATT+AGG - chr4_4:63133590-63133609 Msa0693880:intron 15.0%
!! AATTTATGCATTATCAAATT+GGG + chr4_4:63134275-63134294 None:intergenic 15.0%
!! AAATTTATGCATTATCAAAT+TGG + chr4_4:63134276-63134295 None:intergenic 15.0%
!!! ATAAATTTTCATTTGTTCTT+TGG - chr4_4:63134288-63134307 Msa0693880:intron 15.0%
!! ATAAATTCAAGAAAATTTCT+AGG + chr4_4:63134730-63134749 None:intergenic 15.0%
!! AGATTCATAGTTAATATAAT+TGG - chr4_4:63134937-63134956 Msa0693880:CDS 15.0%
!! TAAATAATTTAGCTAATAGT+AGG - chr4_4:63135978-63135997 Msa0693880:five_prime_UTR 15.0%
!!! TTCTTTTGAAATTATGTAGT+AGG - chr4_4:63130475-63130494 Msa0693880:intron 20.0%
!! ATTCTTGAATCATTTATCAA+CGG - chr4_4:63130832-63130851 Msa0693880:intron 20.0%
!! ATCAAAATATAACTGAACAT+AGG + chr4_4:63131442-63131461 None:intergenic 20.0%
!! AAAAGGATAAACTACAAAAA+CGG + chr4_4:63131497-63131516 None:intergenic 20.0%
!! TAATTCTTCATTATCTATCA+TGG - chr4_4:63132123-63132142 Msa0693880:CDS 20.0%
!!! TTTTAATGTAATATTGGCTA+GGG + chr4_4:63132213-63132232 None:intergenic 20.0%
!!! TTTTTAATGTAATATTGGCT+AGG + chr4_4:63132214-63132233 None:intergenic 20.0%
!! TTCCTATTAGTTATTGAATT+AGG - chr4_4:63132623-63132642 Msa0693880:CDS 20.0%
!! TCCTATTAGTTATTGAATTA+GGG - chr4_4:63132624-63132643 Msa0693880:CDS 20.0%
!! TATGATATATTTGTTTCGAA+TGG - chr4_4:63132889-63132908 Msa0693880:CDS 20.0%
!! AACTATTAAAATTGCTTAAG+GGG + chr4_4:63133139-63133158 None:intergenic 20.0%
!! CAACTATTAAAATTGCTTAA+GGG + chr4_4:63133140-63133159 None:intergenic 20.0%
!! TCAACTATTAAAATTGCTTA+AGG + chr4_4:63133141-63133160 None:intergenic 20.0%
!! ATGATTCCTAATATAGTTAT+AGG + chr4_4:63133599-63133618 None:intergenic 20.0%
!!! ACTAATGATGTTGATTTTTT+TGG - chr4_4:63134867-63134886 Msa0693880:CDS 20.0%
!!! CTAATGATGTTGATTTTTTT+GGG - chr4_4:63134868-63134887 Msa0693880:CDS 20.0%
!!! TAATGATGTTGATTTTTTTG+GGG - chr4_4:63134869-63134888 Msa0693880:CDS 20.0%
! TTTGCCATAAAGAGATTATA+AGG - chr4_4:63129454-63129473 Msa0693880:three_prime_UTR 25.0%
!!! TTGGTTGGTAATTTATGTTA+TGG + chr4_4:63129523-63129542 None:intergenic 25.0%
! GTAATATAAATCCCAAACAA+GGG - chr4_4:63129615-63129634 Msa0693880:three_prime_UTR 25.0%
! ATAAACAATTACGAAGAGAA+AGG + chr4_4:63130136-63130155 None:intergenic 25.0%
! TTTATGTGTATAGTGATCAT+AGG - chr4_4:63130151-63130170 Msa0693880:CDS 25.0%
! AAATCTATCACAATTTAGAG+AGG + chr4_4:63130539-63130558 None:intergenic 25.0%
!! AAATTGTGATAGATTTTCCT+TGG - chr4_4:63130543-63130562 Msa0693880:intron 25.0%
! TTATACCTTTCATAACATTC+TGG - chr4_4:63130762-63130781 Msa0693880:intron 25.0%
! TTTAGGCATTTAAGAGAAAT+TGG - chr4_4:63130944-63130963 Msa0693880:intron 25.0%
! TTAGGCATTTAAGAGAAATT+GGG - chr4_4:63130945-63130964 Msa0693880:intron 25.0%
!! TTTTCAACCAAATGAAAAAC+CGG + chr4_4:63131268-63131287 None:intergenic 25.0%
! TTTGGTTGAAAATGCATTTA+CGG - chr4_4:63131276-63131295 Msa0693880:intron 25.0%
! TGCTTCTCTATATAGAAAAT+GGG - chr4_4:63131372-63131391 Msa0693880:intron 25.0%
!! TTTTAACATCCAACTTCAAT+AGG - chr4_4:63131678-63131697 Msa0693880:CDS 25.0%
! TTTAACATCCAACTTCAATA+GGG - chr4_4:63131679-63131698 Msa0693880:CDS 25.0%
!! GATCATTTTCCAATGATAAT+TGG - chr4_4:63131881-63131900 Msa0693880:intron 25.0%
! CCTATTAGTTATTGAATTAG+GGG - chr4_4:63132625-63132644 Msa0693880:CDS 25.0%
!! CAATATTTCAAGTGGAAAAA+TGG + chr4_4:63133108-63133127 None:intergenic 25.0%
! TTAAAATGCTCAATAGCAAA+TGG + chr4_4:63133283-63133302 None:intergenic 25.0%
! GTAATCAAGAAAATGGAAAT+GGG - chr4_4:63133404-63133423 Msa0693880:CDS 25.0%
! TAATCAAGAAAATGGAAATG+GGG - chr4_4:63133405-63133424 Msa0693880:CDS 25.0%
!!! TTATAGGATTTTAATTTGCG+AGG + chr4_4:63133583-63133602 None:intergenic 25.0%
!! TTATGTACACTTTTGTCTTT+GGG - chr4_4:63133649-63133668 Msa0693880:intron 25.0%
!! ACTTTTCATGCATTTCATTA+TGG + chr4_4:63133725-63133744 None:intergenic 25.0%
! TCCATATCTTGAGAAATATA+AGG + chr4_4:63134466-63134485 None:intergenic 25.0%
! ACAGAGGAAAAAAATAATGA+AGG + chr4_4:63134509-63134528 None:intergenic 25.0%
! AATCAACAAAAGATTAACAG+AGG + chr4_4:63134525-63134544 None:intergenic 25.0%
!! TCTGTTAATCTTTTGTTGAT+TGG - chr4_4:63134524-63134543 Msa0693880:CDS 25.0%
! CCATGTAATCTAAATTAAGA+TGG + chr4_4:63134640-63134659 None:intergenic 25.0%
! CCATCTTAATTTAGATTACA+TGG - chr4_4:63134637-63134656 Msa0693880:CDS 25.0%
!!! GGATATATGAGTTTTATTAG+AGG - chr4_4:63134958-63134977 Msa0693880:CDS 25.0%
! GGAAATTCATCATCTAAAAA+CGG + chr4_4:63135022-63135041 None:intergenic 25.0%
!!! AACATTTTGGCAATTTCTTT+TGG + chr4_4:63135070-63135089 None:intergenic 25.0%
! TTTCACATCTGACTAATAAT+AGG - chr4_4:63135089-63135108 Msa0693880:intron 25.0%
! TTCACATCTGACTAATAATA+GGG - chr4_4:63135090-63135109 Msa0693880:intron 25.0%
! AAACAACAAAAAACTACCAA+TGG + chr4_4:63135156-63135175 None:intergenic 25.0%
! GTCAATAGTTTCATTATGAT+TGG + chr4_4:63135408-63135427 None:intergenic 25.0%
!!! CGATCTTGTTGATTTATATT+TGG + chr4_4:63135717-63135736 None:intergenic 25.0%
! ATTTAAGTAACATGCACAAA+CGG + chr4_4:63135963-63135982 None:intergenic 25.0%
TGCACCTTATAATCTCTTTA+TGG + chr4_4:63129461-63129480 None:intergenic 30.0%
ATAAAGAGATTATAAGGTGC+AGG - chr4_4:63129460-63129479 Msa0693880:three_prime_UTR 30.0%
CGTAATATAAATCCCAAACA+AGG - chr4_4:63129614-63129633 Msa0693880:three_prime_UTR 30.0%
! TAGGGATTTTATGTTATTCC+GGG + chr4_4:63129645-63129664 None:intergenic 30.0%
! GTAGGGATTTTATGTTATTC+CGG + chr4_4:63129646-63129665 None:intergenic 30.0%
GGAATAACATAAAATCCCTA+CGG - chr4_4:63129645-63129664 Msa0693880:three_prime_UTR 30.0%
ATTAGAGAGAGAAAAAGAGA+GGG + chr4_4:63129675-63129694 None:intergenic 30.0%
TATTAGAGAGAGAAAAAGAG+AGG + chr4_4:63129676-63129695 None:intergenic 30.0%
! ATTTTCATTTTCACTCTCCA+CGG - chr4_4:63129740-63129759 Msa0693880:three_prime_UTR 30.0%
!! TTGGTGCTAAGAATTAAGAA+AGG - chr4_4:63130335-63130354 Msa0693880:CDS 30.0%
GGTTATGCTATTGTATTGTA+TGG - chr4_4:63130356-63130375 Msa0693880:intron 30.0%
CATATCCAGAATGTTATGAA+AGG + chr4_4:63130770-63130789 None:intergenic 30.0%
CTTTCATAACATTCTGGATA+TGG - chr4_4:63130768-63130787 Msa0693880:intron 30.0%
ATGATTCAAGAATAACCTCT+GGG + chr4_4:63130825-63130844 None:intergenic 30.0%
AATGATTCAAGAATAACCTC+TGG + chr4_4:63130826-63130845 None:intergenic 30.0%
!! AGCATTGTCTTCATTTTTCT+TGG - chr4_4:63130899-63130918 Msa0693880:intron 30.0%
!! GCATTGTCTTCATTTTTCTT+GGG - chr4_4:63130900-63130919 Msa0693880:intron 30.0%
!! CATTGTCTTCATTTTTCTTG+GGG - chr4_4:63130901-63130920 Msa0693880:intron 30.0%
! CTTCTTTGAGAGATTACTTT+AGG - chr4_4:63130927-63130946 Msa0693880:intron 30.0%
TAGGCATTTAAGAGAAATTG+GGG - chr4_4:63130946-63130965 Msa0693880:intron 30.0%
CAAGCTAATCGTAATGTTAA+TGG - chr4_4:63131037-63131056 Msa0693880:intron 30.0%
! AATGTTAATGGTGATGCAAA+TGG - chr4_4:63131049-63131068 Msa0693880:intron 30.0%
CTGCTTCTCTATATAGAAAA+TGG - chr4_4:63131371-63131390 Msa0693880:intron 30.0%
!! TTTTGATGATCATCTAATCC+TGG - chr4_4:63131455-63131474 Msa0693880:CDS 30.0%
AGTTCGGAACACATTAATTA+AGG + chr4_4:63131549-63131568 None:intergenic 30.0%
GATGTTTCTTGAGTACATTA+AGG + chr4_4:63131625-63131644 None:intergenic 30.0%
TTAACATCCAACTTCAATAG+GGG - chr4_4:63131680-63131699 Msa0693880:CDS 30.0%
TTTCAACAAACAGAACATTG+AGG + chr4_4:63131722-63131741 None:intergenic 30.0%
AAGCAATTACATCGATAGAA+TGG + chr4_4:63131811-63131830 None:intergenic 30.0%
AAGCAATAGCCAATTATCAT+TGG + chr4_4:63131893-63131912 None:intergenic 30.0%
!! GAATGATTTGTTCATTATGC+AGG - chr4_4:63132037-63132056 Msa0693880:intron 30.0%
GATTTCTGATGTTACTACTT+TGG - chr4_4:63132406-63132425 Msa0693880:intron 30.0%
!! ACTCTAATTTTCTGCTACTT+CGG - chr4_4:63132452-63132471 Msa0693880:intron 30.0%
CCCCTAATTCAATAACTAAT+AGG + chr4_4:63132628-63132647 None:intergenic 30.0%
TAAGCATTATATCATGTGAC+AGG + chr4_4:63132837-63132856 None:intergenic 30.0%
ATATATTTGTTTCGAATGGC+AGG - chr4_4:63132893-63132912 Msa0693880:CDS 30.0%
! ATTTCAAGTGGAAAAATGGA+AGG + chr4_4:63133104-63133123 None:intergenic 30.0%
CAAGTTTAACAACTGTAACA+GGG + chr4_4:63133182-63133201 None:intergenic 30.0%
TCAAGTTTAACAACTGTAAC+AGG + chr4_4:63133183-63133202 None:intergenic 30.0%
!!! TGAATCTGTTTATTTTGTGC+AGG - chr4_4:63133200-63133219 Msa0693880:CDS 30.0%
! CTATTGAGCATTTTAAACTC+AGG - chr4_4:63133287-63133306 Msa0693880:CDS 30.0%
GACAATGGTAATCAAGAAAA+TGG - chr4_4:63133397-63133416 Msa0693880:CDS 30.0%
GGTAATCAAGAAAATGGAAA+TGG - chr4_4:63133403-63133422 Msa0693880:CDS 30.0%
GATAGACACAAATGCAATAT+TGG + chr4_4:63133622-63133641 None:intergenic 30.0%
! GTTATGTACACTTTTGTCTT+TGG - chr4_4:63133648-63133667 Msa0693880:intron 30.0%
! TATGTACACTTTTGTCTTTG+GGG - chr4_4:63133650-63133669 Msa0693880:intron 30.0%
!!! CATGATGTGGTATTTTTTCA+TGG - chr4_4:63133686-63133705 Msa0693880:intron 30.0%
CAATCGAGCAAATTAGAAAA+CGG - chr4_4:63134135-63134154 Msa0693880:intron 30.0%
!!! CAGTTTTGTTGAACCAAATT+TGG - chr4_4:63134165-63134184 Msa0693880:intron 30.0%
GCCTTATATTTCTCAAGATA+TGG - chr4_4:63134462-63134481 Msa0693880:CDS 30.0%
!! GCATTTAAAGAAGTTGATAG+AGG + chr4_4:63134569-63134588 None:intergenic 30.0%
TAAATGCATGCTATCATATC+TGG - chr4_4:63134608-63134627 Msa0693880:CDS 30.0%
CTATTTCATGTCTCATTACA+TGG + chr4_4:63134772-63134791 None:intergenic 30.0%
CATGTAATGAGACATGAAAT+AGG - chr4_4:63134770-63134789 Msa0693880:CDS 30.0%
CATCAAATGAGAATACCATA+AGG + chr4_4:63134807-63134826 None:intergenic 30.0%
!!! GATTTTTTTGGGGATTGTAA+TGG - chr4_4:63134879-63134898 Msa0693880:CDS 30.0%
! TAATTCTTTTGTCAGCTGAA+TGG + chr4_4:63135043-63135062 None:intergenic 30.0%
! AGTCAGATGTGAAAACATTT+TGG + chr4_4:63135083-63135102 None:intergenic 30.0%
!!! TTTTGTTGTTTTTGTGTCAC+TGG - chr4_4:63135165-63135184 Msa0693880:intron 30.0%
TGATTGTTAGAACAAACCTT+GGG + chr4_4:63135217-63135236 None:intergenic 30.0%
TTGATTGTTAGAACAAACCT+TGG + chr4_4:63135218-63135237 None:intergenic 30.0%
! GGTTTGTTCTAACAATCAAT+TGG - chr4_4:63135219-63135238 Msa0693880:intron 30.0%
!! ATGTTCTTCTAGTATTGACT+TGG - chr4_4:63135250-63135269 Msa0693880:intron 30.0%
!! ATTGACTTGGTTCATTGATT+AGG - chr4_4:63135263-63135282 Msa0693880:intron 30.0%
! GTTCATTGATTAGGTTATGT+TGG - chr4_4:63135272-63135291 Msa0693880:intron 30.0%
! GTTATGTGTACCTTATGTTT+TGG - chr4_4:63135431-63135450 Msa0693880:intron 30.0%
!! TATAGTAGAGTATTGCATAC+AGG + chr4_4:63135875-63135894 None:intergenic 30.0%
! AGAAGTTTCCTGTTAATTTG+TGG - chr4_4:63136093-63136112 Msa0693880:five_prime_UTR 30.0%
CAATGCTTAGTAAAGAATTG+AGG - chr4_4:63136182-63136201 Msa0693880:five_prime_UTR 30.0%
AGCTATGGTAGGTTATGTTA+TGG + chr4_4:63129492-63129511 None:intergenic 35.0%
GTTATGGATGATGATAGCTA+TGG + chr4_4:63129507-63129526 None:intergenic 35.0%
TATATGGTCATGTGGGTTTA+TGG + chr4_4:63129571-63129590 None:intergenic 35.0%
TTAGAGAGAGAAAAAGAGAG+GGG + chr4_4:63129674-63129693 None:intergenic 35.0%
AAGAGAGAGAAAGAGAGAAA+TGG + chr4_4:63129704-63129723 None:intergenic 35.0%
! ACAATTTAGAGAGGTGCATA+GGG + chr4_4:63130530-63130549 None:intergenic 35.0%
! TGTGATAGATTTTCCTTGGT+TGG - chr4_4:63130547-63130566 Msa0693880:intron 35.0%
! GTGATAGATTTTCCTTGGTT+GGG - chr4_4:63130548-63130567 Msa0693880:intron 35.0%
! TGATAGATTTTCCTTGGTTG+GGG - chr4_4:63130549-63130568 Msa0693880:intron 35.0%
!! GTTGGGGTTATTTTGTTGAT+GGG - chr4_4:63130565-63130584 Msa0693880:intron 35.0%
TAAACAGGTGAGAAGGAAAA+TGG + chr4_4:63130620-63130639 None:intergenic 35.0%
TCATAACATTCTGGATATGG+AGG - chr4_4:63130771-63130790 Msa0693880:intron 35.0%
!! TTAGCTTTTGTGAGGAGTTT+CGG - chr4_4:63130794-63130813 Msa0693880:intron 35.0%
CTTGAATCATTTATCAACGG+CGG - chr4_4:63130835-63130854 Msa0693880:intron 35.0%
AGGCATTTAAGAGAAATTGG+GGG - chr4_4:63130947-63130966 Msa0693880:intron 35.0%
CATGTTGAACAGATGTTTGA+TGG - chr4_4:63131181-63131200 Msa0693880:CDS 35.0%
ATGCCAACAAGTTCATCAAA+GGG + chr4_4:63131238-63131257 None:intergenic 35.0%
! CTATGAGTTAGGTTTTTCCT+AGG + chr4_4:63131406-63131425 None:intergenic 35.0%
GTAGTATGCAACTATGAGTT+AGG + chr4_4:63131417-63131436 None:intergenic 35.0%
AGGATAAACTACAAAAACGG+TGG + chr4_4:63131494-63131513 None:intergenic 35.0%
! TCCGAACTCAAGAAACATTT+TGG - chr4_4:63131561-63131580 Msa0693880:intron 35.0%
GCCAAAATGTTTCTTGAGTT+CGG + chr4_4:63131565-63131584 None:intergenic 35.0%
TCAACATGCTCATTTAAACC+AGG + chr4_4:63131652-63131671 None:intergenic 35.0%
GGTTTAAATGAGCATGTTGA+TGG - chr4_4:63131652-63131671 Msa0693880:CDS 35.0%
! GCAAGCAATATGATTTTCCT+TGG - chr4_4:63132065-63132084 Msa0693880:intron 35.0%
AATCTTTCTGCCTTTCTCAT+TGG - chr4_4:63132094-63132113 Msa0693880:CDS 35.0%
ATCTTTCTGCCTTTCTCATT+GGG - chr4_4:63132095-63132114 Msa0693880:CDS 35.0%
! CTATCATGGTTCTTTTCAAC+TGG - chr4_4:63132137-63132156 Msa0693880:CDS 35.0%
GTTTCAGATGATCTCTTGAA+AGG - chr4_4:63132362-63132381 Msa0693880:CDS 35.0%
AGTAGTAACATCAGAAATCC+TGG + chr4_4:63132405-63132424 None:intergenic 35.0%
AGCAGAAAATTAGAGTCGAT+AGG + chr4_4:63132448-63132467 None:intergenic 35.0%
TAAAATCTTCCTGCAGTCAA+AGG + chr4_4:63132512-63132531 None:intergenic 35.0%
! TTGACTGCAGGAAGATTTTA+TGG - chr4_4:63132512-63132531 Msa0693880:intron 35.0%
TTTGCACCATACAGATGTTT+GGG - chr4_4:63132681-63132700 Msa0693880:CDS 35.0%
ATATTTGTCAGCCTTCTTAG+AGG - chr4_4:63132803-63132822 Msa0693880:intron 35.0%
TATTTGTCAGCCTTCTTAGA+GGG - chr4_4:63132804-63132823 Msa0693880:intron 35.0%
!! TCACGGAATGGATTATAGTT+TGG + chr4_4:63132963-63132982 None:intergenic 35.0%
TTGTTATCTGTTGCGGTTTA+TGG - chr4_4:63133023-63133042 Msa0693880:CDS 35.0%
TGTTATCTGTTGCGGTTTAT+GGG - chr4_4:63133024-63133043 Msa0693880:CDS 35.0%
CCAGCTTACAATATTTCAAG+TGG + chr4_4:63133116-63133135 None:intergenic 35.0%
CCACTTGAAATATTGTAAGC+TGG - chr4_4:63133113-63133132 Msa0693880:CDS 35.0%
AAGCATGTTAGCTGGAATTT+CGG + chr4_4:63133242-63133261 None:intergenic 35.0%
TGTAAACCAATAGCGAAGAA+GGG + chr4_4:63133326-63133345 None:intergenic 35.0%
TCTTGATTACCATTGTCATC+AGG + chr4_4:63133394-63133413 None:intergenic 35.0%
TGATATTGGTACAACTACCA+GGG + chr4_4:63133906-63133925 None:intergenic 35.0%
GTAGTTGTACCAATATCACT+GGG - chr4_4:63133908-63133927 Msa0693880:intron 35.0%
CACTTAATGCCATGAGTTAT+AGG + chr4_4:63133965-63133984 None:intergenic 35.0%
CACATAACTTCCAATGATGA+AGG + chr4_4:63134084-63134103 None:intergenic 35.0%
TCATTGGAAGTTATGTGATC+TGG - chr4_4:63134087-63134106 Msa0693880:intron 35.0%
TGTTGAACCAAATTTGGAAG+TGG - chr4_4:63134171-63134190 Msa0693880:intron 35.0%
! TTCTGCCCTTTTGTCTATAT+GGG - chr4_4:63134214-63134233 Msa0693880:intron 35.0%
CCTTACCCATATAGACAAAA+GGG + chr4_4:63134222-63134241 None:intergenic 35.0%
TCCTTACCCATATAGACAAA+AGG + chr4_4:63134223-63134242 None:intergenic 35.0%
TCTTGATAAAGGAGGAATAC+TGG + chr4_4:63134431-63134450 None:intergenic 35.0%
TATTCCTCCTTTATCAAGAC+TGG - chr4_4:63134432-63134451 Msa0693880:CDS 35.0%
ATTCCTCCTTTATCAAGACT+GGG - chr4_4:63134433-63134452 Msa0693880:CDS 35.0%
!! TCTCAAGATATGGACTAGAT+TGG - chr4_4:63134472-63134491 Msa0693880:CDS 35.0%
TAGGCACTATATTGTCCTTA+TGG - chr4_4:63134789-63134808 Msa0693880:CDS 35.0%
CATCATCTAAAAACGGTAGA+TGG + chr4_4:63135015-63135034 None:intergenic 35.0%
CAACAAAAAACTACCAATGG+CGG + chr4_4:63135153-63135172 None:intergenic 35.0%
ACAGATAACCCATCTACAAA+TGG + chr4_4:63135191-63135210 None:intergenic 35.0%
GATTGTTAGAACAAACCTTG+GGG + chr4_4:63135216-63135235 None:intergenic 35.0%
ACAATTCAATTCGTGATGAC+CGG - chr4_4:63135592-63135611 Msa0693880:CDS 35.0%
AGAATGCATGCTAAGATAGA+TGG - chr4_4:63136057-63136076 Msa0693880:five_prime_UTR 35.0%
AGATTATAAGGTGCAGGCAA+TGG - chr4_4:63129466-63129485 Msa0693880:three_prime_UTR 40.0%
TGGATGATGATAGCTATGGT+AGG + chr4_4:63129503-63129522 None:intergenic 40.0%
! GGTTGTGATTTGTGTTTGGT+TGG + chr4_4:63129538-63129557 None:intergenic 40.0%
GAGAGAAAGAGAGAAATGGT+GGG + chr4_4:63129700-63129719 None:intergenic 40.0%
AGAGAGAAAGAGAGAAATGG+TGG + chr4_4:63129701-63129720 None:intergenic 40.0%
! TCATCGTATTTTGCAGATGG+CGG + chr4_4:63129945-63129964 None:intergenic 40.0%
! TCGTCATCGTATTTTGCAGA+TGG + chr4_4:63129948-63129967 None:intergenic 40.0%
AGGATGTTTGCCGTATTTGT+CGG - chr4_4:63129982-63130001 Msa0693880:CDS 40.0%
GTGATGCTGATAATCCGTTA+CGG - chr4_4:63130012-63130031 Msa0693880:CDS 40.0%
ATCAAGATTGTCTCCTTCAG+TGG - chr4_4:63130072-63130091 Msa0693880:CDS 40.0%
TGCTATGATTAAGCCACTGA+AGG + chr4_4:63130088-63130107 None:intergenic 40.0%
! CACAATTTAGAGAGGTGCAT+AGG + chr4_4:63130531-63130550 None:intergenic 40.0%
CAACAAAATAACCCCAACCA+AGG + chr4_4:63130563-63130582 None:intergenic 40.0%
!! GGTTGGGGTTATTTTGTTGA+TGG - chr4_4:63130564-63130583 Msa0693880:intron 40.0%
ATGGGCTTAAAATGTGTTGC+AGG - chr4_4:63130583-63130602 Msa0693880:intron 40.0%
!! GTTGCCTTTTCAAGAGTTTG+TGG - chr4_4:63130661-63130680 Msa0693880:intron 40.0%
!! CCTTTTCAAGAGTTTGTGGT+GGG - chr4_4:63130665-63130684 Msa0693880:intron 40.0%
!!! TATGGAGGTTAGCTTTTGTG+AGG - chr4_4:63130786-63130805 Msa0693880:intron 40.0%
TTTAAGAGAAATTGGGGGAC+AGG - chr4_4:63130952-63130971 Msa0693880:intron 40.0%
GAAGATGAAGTGGACAGAAA+TGG - chr4_4:63130986-63131005 Msa0693880:intron 40.0%
! TGAACAGATGTTTGATGGTC+TGG - chr4_4:63131186-63131205 Msa0693880:CDS 40.0%
GTACCCTTTGATGAACTTGT+TGG - chr4_4:63131232-63131251 Msa0693880:CDS 40.0%
CATGCCAACAAGTTCATCAA+AGG + chr4_4:63131239-63131258 None:intergenic 40.0%
GAAAATGGGTAATCTGACCT+AGG - chr4_4:63131386-63131405 Msa0693880:intron 40.0%
TCATCTAATCCTGGTGTTTC+TGG - chr4_4:63131464-63131483 Msa0693880:CDS 40.0%
ACTCAAGAAACATCTTTGCC+TGG - chr4_4:63131631-63131650 Msa0693880:intron 40.0%
ACATCGATAGAATGGCAACT+GGG + chr4_4:63131803-63131822 None:intergenic 40.0%
TACATCGATAGAATGGCAAC+TGG + chr4_4:63131804-63131823 None:intergenic 40.0%
TCAACTGAAGCAGTATTCTC+TGG - chr4_4:63131856-63131875 Msa0693880:intron 40.0%
CAACTGAAGCAGTATTCTCT+GGG - chr4_4:63131857-63131876 Msa0693880:intron 40.0%
TTTGTTCATTATGCAGGTGC+TGG - chr4_4:63132043-63132062 Msa0693880:intron 40.0%
GCAGAAAGATTACAACTCCA+AGG + chr4_4:63132085-63132104 None:intergenic 40.0%
ATTATGCGACCCAATGAGAA+AGG + chr4_4:63132107-63132126 None:intergenic 40.0%
!! AAAGAGAAGTGTCTGTAGGT+GGG + chr4_4:63132190-63132209 None:intergenic 40.0%
TCAACTGCTACTCAAGAAAG+TGG - chr4_4:63132260-63132279 Msa0693880:CDS 40.0%
ACTCAAGAAAGTGGATCAGT+TGG - chr4_4:63132269-63132288 Msa0693880:CDS 40.0%
TCAGATGATCTCTTGAAAGG+AGG - chr4_4:63132365-63132384 Msa0693880:CDS 40.0%
CAGATGATCTCTTGAAAGGA+GGG - chr4_4:63132366-63132385 Msa0693880:CDS 40.0%
GATGTTACTACTTTGGCAGT+TGG - chr4_4:63132413-63132432 Msa0693880:intron 40.0%
TGCGTTAATTCGCTACACAA+AGG - chr4_4:63132481-63132500 Msa0693880:intron 40.0%
GCGTTAATTCGCTACACAAA+GGG - chr4_4:63132482-63132501 Msa0693880:intron 40.0%
AGACAATTCCATCTCTCTTC+AGG - chr4_4:63132552-63132571 Msa0693880:CDS 40.0%
AAAAACTGCCTGAAGAGAGA+TGG + chr4_4:63132563-63132582 None:intergenic 40.0%
! AATGAGGCATTTGATGACCA+TGG - chr4_4:63132589-63132608 Msa0693880:CDS 40.0%
GTTTGCACCATACAGATGTT+TGG - chr4_4:63132680-63132699 Msa0693880:CDS 40.0%
TGTCTTCCCAAACATCTGTA+TGG + chr4_4:63132690-63132709 None:intergenic 40.0%
ACAGATGTTTGGGAAGACAA+TGG - chr4_4:63132691-63132710 Msa0693880:CDS 40.0%
TTCTCCTTTAGCAAGCTCAT+TGG - chr4_4:63132739-63132758 Msa0693880:intron 40.0%
ATTTGTCAGCCTTCTTAGAG+GGG - chr4_4:63132805-63132824 Msa0693880:intron 40.0%
! AGGAAATTACCCCTCTAAGA+AGG + chr4_4:63132817-63132836 None:intergenic 40.0%
!! ATGGGGTTTTGTACTTCCTT+CGG - chr4_4:63132925-63132944 Msa0693880:CDS 40.0%
GGATTATAGTTTGGATCAGC+CGG + chr4_4:63132954-63132973 None:intergenic 40.0%
TCATCTATCAGATCACGGAA+TGG + chr4_4:63132975-63132994 None:intergenic 40.0%
CAGGATCATCTATCAGATCA+CGG + chr4_4:63132980-63132999 None:intergenic 40.0%
!!! CAGGGTTTTGTTATCTGTTG+CGG - chr4_4:63133016-63133035 Msa0693880:CDS 40.0%
TGGGAGTTTGATTGTTATGC+TGG - chr4_4:63133043-63133062 Msa0693880:CDS 40.0%
TGCCAGTTAAACTTGCAATG+CGG - chr4_4:63133072-63133091 Msa0693880:CDS 40.0%
ATCCGCATTGCAAGTTTAAC+TGG + chr4_4:63133077-63133096 None:intergenic 40.0%
AGTTAAACTTGCAATGCGGA+TGG - chr4_4:63133076-63133095 Msa0693880:CDS 40.0%
TTAGCTGGAATTTCGGTGAA+GGG + chr4_4:63133235-63133254 None:intergenic 40.0%
! TGAAAGAGAAGCATGTTAGC+TGG + chr4_4:63133250-63133269 None:intergenic 40.0%
TCAAATCCCTTCTTCGCTAT+TGG - chr4_4:63133317-63133336 Msa0693880:CDS 40.0%
CTGTAAACCAATAGCGAAGA+AGG + chr4_4:63133327-63133346 None:intergenic 40.0%
! ATTGGTTTACAGCAGTTGGT+TGG - chr4_4:63133335-63133354 Msa0693880:CDS 40.0%
TTGGTTTACAGCAGTTGGTT+GGG - chr4_4:63133336-63133355 Msa0693880:CDS 40.0%
TTACCATTGTCATCAGGTCT+AGG + chr4_4:63133388-63133407 None:intergenic 40.0%
AGGTTACAGATAGTACAAGC+AGG - chr4_4:63133445-63133464 Msa0693880:CDS 40.0%
GGTTACAGATAGTACAAGCA+GGG - chr4_4:63133446-63133465 Msa0693880:CDS 40.0%
GTTACAGATAGTACAAGCAG+GGG - chr4_4:63133447-63133466 Msa0693880:CDS 40.0%
TTCAAATCATCGCCAGCAAA+TGG + chr4_4:63133493-63133512 None:intergenic 40.0%
AAGAACAATGCGAAGTGCAA+AGG + chr4_4:63133840-63133859 None:intergenic 40.0%
GTGATATTGGTACAACTACC+AGG + chr4_4:63133907-63133926 None:intergenic 40.0%
GGTAGTTGTACCAATATCAC+TGG - chr4_4:63133907-63133926 Msa0693880:intron 40.0%
TTGTACCAATATCACTGGGA+AGG - chr4_4:63133912-63133931 Msa0693880:intron 40.0%
AGTATCCTTCCCAGTGATAT+TGG + chr4_4:63133920-63133939 None:intergenic 40.0%
AGTTATAGGAAGACGAGGAA+TGG + chr4_4:63133951-63133970 None:intergenic 40.0%
ACTCATGGCATTAAGTGCAA+TGG - chr4_4:63133968-63133987 Msa0693880:intron 40.0%
GATCTGTATGCCTTCATCAT+TGG - chr4_4:63134071-63134090 Msa0693880:intron 40.0%
TCGAGCAAATTAGAAAACGG+AGG - chr4_4:63134138-63134157 Msa0693880:intron 40.0%
TGCTACACCACTTCCAAATT+TGG + chr4_4:63134181-63134200 None:intergenic 40.0%
! GTTCTGCCCTTTTGTCTATA+TGG - chr4_4:63134213-63134232 Msa0693880:intron 40.0%
! CCCTTTTGTCTATATGGGTA+AGG - chr4_4:63134219-63134238 Msa0693880:intron 40.0%
AATACTGGACTTTCATCCAC+CGG + chr4_4:63134416-63134435 None:intergenic 40.0%
CTTTATCAAGACTGGGCATT+GGG - chr4_4:63134440-63134459 Msa0693880:CDS 40.0%
AGTTACTTGAGTAGAGCAGA+AGG + chr4_4:63134663-63134682 None:intergenic 40.0%
AAATGTATCCTGCTGTGCAT+TGG - chr4_4:63134686-63134705 Msa0693880:CDS 40.0%
TTTGGGGATTGTAATGGCAA+TGG - chr4_4:63134885-63134904 Msa0693880:CDS 40.0%
AGAAACTAGTGTACTCAGTG+AGG + chr4_4:63134990-63135009 None:intergenic 40.0%
GAGAGACTGAAAAAGAAACG+AGG + chr4_4:63135127-63135146 None:intergenic 40.0%
! TGCCTCTAATGGATGAAAGT+TGG - chr4_4:63135304-63135323 Msa0693880:intron 40.0%
TTGGCGAGTAAAGTTTGAGA+GGG - chr4_4:63135323-63135342 Msa0693880:intron 40.0%
!! TGTCTATCGATTTGCATGGT+TGG - chr4_4:63135503-63135522 Msa0693880:intron 40.0%
!! GTCTATCGATTTGCATGGTT+GGG - chr4_4:63135504-63135523 Msa0693880:intron 40.0%
AACACACGAAACTGAAAGAG+AGG + chr4_4:63135533-63135552 None:intergenic 40.0%
GAACCAGACATGAAATCTCT+TGG + chr4_4:63135562-63135581 None:intergenic 40.0%
GGTCATCACGAATTGAATTG+TGG + chr4_4:63135593-63135612 None:intergenic 40.0%
AATGAAGCTGCAACTTCTAC+AGG - chr4_4:63135666-63135685 Msa0693880:CDS 40.0%
!!! GTGCAGGATGCTATTTTACT+TGG - chr4_4:63135690-63135709 Msa0693880:CDS 40.0%
ATTGAGGCACGTAAATCAAC+AGG - chr4_4:63135758-63135777 Msa0693880:CDS 40.0%
GTCTGAGTGAATTGTTTGTC+AGG - chr4_4:63135783-63135802 Msa0693880:CDS 40.0%
GAGTGAATTGTTTGTCAGGT+AGG - chr4_4:63135787-63135806 Msa0693880:CDS 40.0%
GAATTGTTTGTCAGGTAGGA+AGG - chr4_4:63135791-63135810 Msa0693880:CDS 40.0%
! GGAGGGTTGTGATTTGTGTT+TGG + chr4_4:63129542-63129561 None:intergenic 45.0%
GGTGACGTATATGGTCATGT+GGG + chr4_4:63129578-63129597 None:intergenic 45.0%
! TGGTGACGTATATGGTCATG+TGG + chr4_4:63129579-63129598 None:intergenic 45.0%
!! ACGTGTGTTGGTGACGTATA+TGG + chr4_4:63129587-63129606 None:intergenic 45.0%
! ATTTTCACTCTCCACGGACT+CGG - chr4_4:63129746-63129765 Msa0693880:three_prime_UTR 45.0%
CAAAGGAAAGGAGATCGATG+CGG - chr4_4:63129893-63129912 Msa0693880:CDS 45.0%
TGACGACGATGAAGATGAAG+AGG - chr4_4:63129962-63129981 Msa0693880:CDS 45.0%
! ACGGATTATCAGCATCACCA+GGG + chr4_4:63130010-63130029 None:intergenic 45.0%
!! AACGGATTATCAGCATCACC+AGG + chr4_4:63130011-63130030 None:intergenic 45.0%
AGGTGCATAGGGCGAAAATT+TGG + chr4_4:63130519-63130538 None:intergenic 45.0%
CTCTGCATAAACAGGTGAGA+AGG + chr4_4:63130627-63130646 None:intergenic 45.0%
! GGAGCATTCTCTGCATAAAC+AGG + chr4_4:63130635-63130654 None:intergenic 45.0%
TCTTGAAAAGGCAACCTAGC+AGG + chr4_4:63130656-63130675 None:intergenic 45.0%
!! GCCTTTTCAAGAGTTTGTGG+TGG - chr4_4:63130664-63130683 Msa0693880:intron 45.0%
CCCACCACAAACTCTTGAAA+AGG + chr4_4:63130668-63130687 None:intergenic 45.0%
! TCAAGAGTTTGTGGTGGGAA+TGG - chr4_4:63130670-63130689 Msa0693880:intron 45.0%
!! TGAGTTTTGTGCTGTCTGTG+TGG - chr4_4:63130732-63130751 Msa0693880:intron 45.0%
ATTCTGACTGATTGCCTCCA+TGG - chr4_4:63130860-63130879 Msa0693880:intron 45.0%
TTGCAGAAAGCAGGAAACCA+TGG + chr4_4:63130880-63130899 None:intergenic 45.0%
AGACAATGCTTGCAGAAAGC+AGG + chr4_4:63130889-63130908 None:intergenic 45.0%
TGCGGATAGAGAAGATGAAG+TGG - chr4_4:63130976-63130995 Msa0693880:intron 45.0%
!! TTACGATTAGCTTGTCCAGC+AGG + chr4_4:63131031-63131050 None:intergenic 45.0%
GATGCAAATGGAGAAGATGC+TGG - chr4_4:63131061-63131080 Msa0693880:intron 45.0%
GGGCAGGTCAAGTAATTAGA+AGG - chr4_4:63131104-63131123 Msa0693880:intron 45.0%
TGAAAATGTTGCTGCGCGAT+GGG - chr4_4:63131132-63131151 Msa0693880:intron 45.0%
!! TGATGAACTTGTTGGCATGC+AGG - chr4_4:63131240-63131259 Msa0693880:CDS 45.0%
!! GATGAACTTGTTGGCATGCA+GGG - chr4_4:63131241-63131260 Msa0693880:CDS 45.0%
CAAGAAGCCCCTATTGAAGT+TGG + chr4_4:63131690-63131709 None:intergenic 45.0%
ATCGATAGAATGGCAACTGG+GGG + chr4_4:63131801-63131820 None:intergenic 45.0%
CATCGATAGAATGGCAACTG+GGG + chr4_4:63131802-63131821 None:intergenic 45.0%
!! CTTTTCAACTGGTAGCGATG+CGG - chr4_4:63132148-63132167 Msa0693880:CDS 45.0%
!! GAAAGAGAAGTGTCTGTAGG+TGG + chr4_4:63132191-63132210 None:intergenic 45.0%
!! AGGGAAAGAGAAGTGTCTGT+AGG + chr4_4:63132194-63132213 None:intergenic 45.0%
CTCTTGAAAGGAGGGTCAAT+TGG - chr4_4:63132374-63132393 Msa0693880:CDS 45.0%
!!! GGCAGTTTTTAGCAGCAATG+AGG - chr4_4:63132573-63132592 Msa0693880:CDS 45.0%
! GCATTTGATGACCATGGTGA+AGG - chr4_4:63132595-63132614 Msa0693880:CDS 45.0%
! TTTGATGACCATGGTGAAGG+TGG - chr4_4:63132598-63132617 Msa0693880:CDS 45.0%
!! TGAGCCAATGAGCTTGCTAA+AGG + chr4_4:63132746-63132765 None:intergenic 45.0%
!! TAGCAAGCTCATTGGCTCAT+TGG - chr4_4:63132747-63132766 Msa0693880:intron 45.0%
!! AGCAAGCTCATTGGCTCATT+GGG - chr4_4:63132748-63132767 Msa0693880:intron 45.0%
!! TCATTGGCTCATTGGGTTGT+AGG - chr4_4:63132755-63132774 Msa0693880:intron 45.0%
!! CATTGGCTCATTGGGTTGTA+GGG - chr4_4:63132756-63132775 Msa0693880:intron 45.0%
! GTTTCGAATGGCAGGTTTTG+CGG - chr4_4:63132901-63132920 Msa0693880:CDS 45.0%
! AATGGCAGGTTTTGCGGAAT+GGG - chr4_4:63132907-63132926 Msa0693880:CDS 45.0%
!! TGGGGTTTTGTACTTCCTTC+GGG - chr4_4:63132926-63132945 Msa0693880:CDS 45.0%
TTTGTACTTCCTTCGGGATC+CGG - chr4_4:63132932-63132951 Msa0693880:CDS 45.0%
GTTAGCTGGAATTTCGGTGA+AGG + chr4_4:63133236-63133255 None:intergenic 45.0%
!! CGCTATTGGTTTACAGCAGT+TGG - chr4_4:63133331-63133350 Msa0693880:CDS 45.0%
TTGCCTAGACCTGATGACAA+TGG - chr4_4:63133382-63133401 Msa0693880:CDS 45.0%
AGAGTCACTAATGCAGATGC+TGG - chr4_4:63133514-63133533 Msa0693880:CDS 45.0%
!! GTACACTTTTGTCTTTGGGG+TGG - chr4_4:63133653-63133672 Msa0693880:intron 45.0%
ACTTCGCATTGTTCTTCTGC+TGG - chr4_4:63133844-63133863 Msa0693880:intron 45.0%
TTCTTCTGCTGGTCATTGCT+TGG - chr4_4:63133855-63133874 Msa0693880:intron 45.0%
CCATGAGTTATAGGAAGACG+AGG + chr4_4:63133956-63133975 None:intergenic 45.0%
CCTCGTCTTCCTATAACTCA+TGG - chr4_4:63133953-63133972 Msa0693880:intron 45.0%
!! TTTGTCATCCCAGTGCTGAT+TGG - chr4_4:63134350-63134369 Msa0693880:CDS 45.0%
!! TTGTCATCCCAGTGCTGATT+GGG - chr4_4:63134351-63134370 Msa0693880:CDS 45.0%
! TGGGCTTCTCTTTGAGCTTT+TGG - chr4_4:63134370-63134389 Msa0693880:CDS 45.0%
CATTGTGCCAATGAGAGTTC+CGG - chr4_4:63134394-63134413 Msa0693880:CDS 45.0%
ATGCCCAGTCTTGATAAAGG+AGG + chr4_4:63134439-63134458 None:intergenic 45.0%
CCAATGCCCAGTCTTGATAA+AGG + chr4_4:63134442-63134461 None:intergenic 45.0%
CCTTTATCAAGACTGGGCAT+TGG - chr4_4:63134439-63134458 Msa0693880:CDS 45.0%
TGTCACTGGCCATTTGTAGA+TGG - chr4_4:63135179-63135198 Msa0693880:intron 45.0%
GTCACTGGCCATTTGTAGAT+GGG - chr4_4:63135180-63135199 Msa0693880:intron 45.0%
!! CATCCATTAGAGGCATCATG+TGG + chr4_4:63135299-63135318 None:intergenic 45.0%
CGCCAACTTTCATCCATTAG+AGG + chr4_4:63135309-63135328 None:intergenic 45.0%
GTTGGCGAGTAAAGTTTGAG+AGG - chr4_4:63135322-63135341 Msa0693880:intron 45.0%
TTTGAGAGGGTGAGAGATGA+TGG - chr4_4:63135336-63135355 Msa0693880:intron 45.0%
! TGAGAGATGATGGTTTCTCC+AGG - chr4_4:63135346-63135365 Msa0693880:intron 45.0%
TTGGAAGAACAATCTCCCGT+AGG + chr4_4:63135389-63135408 None:intergenic 45.0%
!!! GTACCTTATGTTTTGGCCAG+AGG - chr4_4:63135438-63135457 Msa0693880:intron 45.0%
ACACCTCTGGCCAAAACATA+AGG + chr4_4:63135444-63135463 None:intergenic 45.0%
CAGCAGAATTGACCACCAAT+GGG + chr4_4:63135485-63135504 None:intergenic 45.0%
ACAGCAGAATTGACCACCAA+TGG + chr4_4:63135486-63135505 None:intergenic 45.0%
!! CTGCTGTCTATCGATTTGCA+TGG - chr4_4:63135499-63135518 Msa0693880:intron 45.0%
GTGCCAAGAGATTTCATGTC+TGG - chr4_4:63135556-63135575 Msa0693880:CDS 45.0%
CAAGATCGTGATGCAGATGT+TGG - chr4_4:63135729-63135748 Msa0693880:CDS 45.0%
CAGATGTTGGACTTCGATTG+AGG - chr4_4:63135742-63135761 Msa0693880:CDS 45.0%
TCAGGTAGGAAGGAATCTCT+AGG - chr4_4:63135801-63135820 Msa0693880:CDS 45.0%
!! TCTAGGAAGTGTTCAGTCTC+TGG - chr4_4:63135818-63135837 Msa0693880:CDS 45.0%
CCAACGCACCACAAATTAAC+AGG + chr4_4:63136104-63136123 None:intergenic 45.0%
!! CCTGTTAATTTGTGGTGCGT+TGG - chr4_4:63136101-63136120 Msa0693880:five_prime_UTR 45.0%
!! AATGAAAATTATTAAAAAAA+AGG + chr4_4:63129729-63129748 None:intergenic 5.0%
! TGGGTTTATGGTGACGTGGA+GGG + chr4_4:63129559-63129578 None:intergenic 50.0%
! CATGTGGGTTTATGGTGACG+TGG + chr4_4:63129563-63129582 None:intergenic 50.0%
TTACGCGTGTGTACGTGTGT+TGG + chr4_4:63129599-63129618 None:intergenic 50.0%
ATCCCAAACAAGGGCAATCC+CGG - chr4_4:63129624-63129643 Msa0693880:three_prime_UTR 50.0%
! TTCCGGGATTGCCCTTGTTT+GGG + chr4_4:63129629-63129648 None:intergenic 50.0%
ATTCCGGGATTGCCCTTGTT+TGG + chr4_4:63129630-63129649 None:intergenic 50.0%
AAAAGAGAGGGGTTGCCGTA+GGG + chr4_4:63129663-63129682 None:intergenic 50.0%
AAAAAGAGAGGGGTTGCCGT+AGG + chr4_4:63129664-63129683 None:intergenic 50.0%
ATTGGAGTTCCGTCGAGAGA+AGG + chr4_4:63129813-63129832 None:intergenic 50.0%
AGACGAAGAGGAAGAGGAAG+GGG + chr4_4:63129862-63129881 None:intergenic 50.0%
GAGACGAAGAGGAAGAGGAA+GGG + chr4_4:63129863-63129882 None:intergenic 50.0%
! CGCATCGATCTCCTTTCCTT+TGG + chr4_4:63129895-63129914 None:intergenic 50.0%
AAAGGAGATCGATGCGGATG+CGG - chr4_4:63129899-63129918 Msa0693880:CDS 50.0%
CACCAGGGTTCCGACAAATA+CGG + chr4_4:63129995-63130014 None:intergenic 50.0%
ATGCAGAGAATGCTCCTGCT+AGG - chr4_4:63130639-63130658 Msa0693880:intron 50.0%
CAGAAAGCAGGAAACCATGG+AGG + chr4_4:63130877-63130896 None:intergenic 50.0%
AGAAATTGGGGGACAGGATG+CGG - chr4_4:63130958-63130977 Msa0693880:intron 50.0%
AAGTGGACAGAAATGGTGCC+CGG - chr4_4:63130993-63131012 Msa0693880:intron 50.0%
CTGAAAATGTTGCTGCGCGA+TGG - chr4_4:63131131-63131150 Msa0693880:intron 50.0%
! GCAGGGTCCGGTTTTTCATT+TGG - chr4_4:63131258-63131277 Msa0693880:CDS 50.0%
TCGATAGAATGGCAACTGGG+GGG + chr4_4:63131800-63131819 None:intergenic 50.0%
!! TGGTAGCGATGCGGTGTTAT+CGG - chr4_4:63132157-63132176 Msa0693880:CDS 50.0%
GAGGGTCAATTGGAACTTCC+AGG - chr4_4:63132384-63132403 Msa0693880:CDS 50.0%
AAGGGTGAACCTTTGACTGC+AGG - chr4_4:63132500-63132519 Msa0693880:intron 50.0%
TAGGAAAGCCACCTTCACCA+TGG + chr4_4:63132609-63132628 None:intergenic 50.0%
GGGTATTTCCCCTGATGTGT+GGG - chr4_4:63132645-63132664 Msa0693880:CDS 50.0%
TATTTCCCCTGATGTGTGGG+TGG - chr4_4:63132648-63132667 Msa0693880:CDS 50.0%
! GAATGGCAGGTTTTGCGGAA+TGG - chr4_4:63132906-63132925 Msa0693880:CDS 50.0%
! ATGGCAGGTTTTGCGGAATG+GGG - chr4_4:63132908-63132927 Msa0693880:CDS 50.0%
TGTGCACAAACATGCTCGCA+GGG - chr4_4:63132998-63133017 Msa0693880:CDS 50.0%
CAGGGTATGGTTCCATTTGC+TGG - chr4_4:63133478-63133497 Msa0693880:CDS 50.0%
CACTAATGCAGATGCTGGAG+AGG - chr4_4:63133519-63133538 Msa0693880:CDS 50.0%
CGAGGAACTCACTCAGAATC+AGG + chr4_4:63133565-63133584 None:intergenic 50.0%
!! TGTCTTTGGGGTGGAGAAAG+AGG - chr4_4:63133662-63133681 Msa0693880:intron 50.0%
!! GTCTTTGGGGTGGAGAAAGA+GGG - chr4_4:63133663-63133682 Msa0693880:intron 50.0%
! TGGAGAAAGAGGGCATGATG+TGG - chr4_4:63133673-63133692 Msa0693880:intron 50.0%
AGAGAAGCCCAATCAGCACT+GGG + chr4_4:63134361-63134380 None:intergenic 50.0%
AAGAGAAGCCCAATCAGCAC+TGG + chr4_4:63134362-63134381 None:intergenic 50.0%
TCATCCACCGGAACTCTCAT+TGG + chr4_4:63134404-63134423 None:intergenic 50.0%
AATCGCTACCAATGCACAGC+AGG + chr4_4:63134697-63134716 None:intergenic 50.0%
TCAGTCTCTCTTTCCGCCAT+TGG - chr4_4:63135137-63135156 Msa0693880:intron 50.0%
! ATGGGTTATCTGTGTCCCCA+AGG - chr4_4:63135198-63135217 Msa0693880:intron 50.0%
GGACCACATGATGCCTCTAA+TGG - chr4_4:63135293-63135312 Msa0693880:intron 50.0%
!! AAGTGCTGGAAACACACCTC+TGG + chr4_4:63135457-63135476 None:intergenic 50.0%
! AGAGGTGTGTTTCCAGCACT+TGG - chr4_4:63135456-63135475 Msa0693880:intron 50.0%
GAGGTGTGTTTCCAGCACTT+GGG - chr4_4:63135457-63135476 Msa0693880:intron 50.0%
CGTGATGACCGGTATCTGAT+TGG - chr4_4:63135603-63135622 Msa0693880:CDS 50.0%
ATGACCGGTATCTGATTGGC+CGG - chr4_4:63135607-63135626 Msa0693880:CDS 50.0%
CTCCGAAGTTATGCAACCTC+CGG + chr4_4:63135629-63135648 None:intergenic 50.0%
! TGCAACTTCTACAGGAGTGC+AGG - chr4_4:63135674-63135693 Msa0693880:CDS 50.0%
GAGGCACGTAAATCAACAGG+CGG - chr4_4:63135761-63135780 Msa0693880:CDS 50.0%
! GTGGGTTTATGGTGACGTGG+AGG + chr4_4:63129560-63129579 None:intergenic 55.0%
AGAGGAAGAGGAAGGGGAAG+AGG + chr4_4:63129856-63129875 None:intergenic 55.0%
GGAGACGAAGAGGAAGAGGA+AGG + chr4_4:63129864-63129883 None:intergenic 55.0%
TCTTCCTCTTCGTCTCCACG+CGG - chr4_4:63129867-63129886 Msa0693880:CDS 55.0%
TCCACGCGGTTCCAAAGGAA+AGG - chr4_4:63129881-63129900 Msa0693880:CDS 55.0%
!! TCCTTTCCTTTGGAACCGCG+TGG + chr4_4:63129885-63129904 None:intergenic 55.0%
TGCCGTATTTGTCGGAACCC+TGG - chr4_4:63129990-63130009 Msa0693880:CDS 55.0%
TAGCAACGCTCGTCAATGCG+AGG - chr4_4:63130103-63130122 Msa0693880:CDS 55.0%
AGTGGACAGAAATGGTGCCC+GGG - chr4_4:63130994-63131013 Msa0693880:intron 55.0%
GAAGATGCTGGTGCAGCACA+AGG - chr4_4:63131073-63131092 Msa0693880:intron 55.0%
TGGTGCAGCACAAGGAGTTG+CGG - chr4_4:63131081-63131100 Msa0693880:intron 55.0%
GATGGTCTGGATGACGCTGA+TGG - chr4_4:63131199-63131218 Msa0693880:CDS 55.0%
! ACTTGTTGGCATGCAGGGTC+CGG - chr4_4:63131246-63131265 Msa0693880:CDS 55.0%
CGATAGAATGGCAACTGGGG+GGG + chr4_4:63131799-63131818 None:intergenic 55.0%
!! TAGCGATGCGGTGTTATCGG+TGG - chr4_4:63132160-63132179 Msa0693880:CDS 55.0%
! GGGGTATTTCCCCTGATGTG+TGG - chr4_4:63132644-63132663 Msa0693880:CDS 55.0%
CTGCGAGCATGTTTGTGCAC+AGG + chr4_4:63132999-63133018 None:intergenic 55.0%
CTGTGCACAAACATGCTCGC+AGG - chr4_4:63132997-63133016 Msa0693880:CDS 55.0%
CCAGGGCAGAGTTGAAGACA+AGG + chr4_4:63133889-63133908 None:intergenic 55.0%
CCTTGTCTTCAACTCTGCCC+TGG - chr4_4:63133886-63133905 Msa0693880:intron 55.0%
GTGATCTGGACTGCTGTTGC+TGG - chr4_4:63134101-63134120 Msa0693880:intron 55.0%
TGTGCCAATGAGAGTTCCGG+TGG - chr4_4:63134397-63134416 Msa0693880:CDS 55.0%
TGATGGTTTCTCCAGGCTGC+AGG - chr4_4:63135353-63135372 Msa0693880:intron 55.0%
GATGGTTTCTCCAGGCTGCA+GGG - chr4_4:63135354-63135373 Msa0693880:intron 55.0%
TGCAGGGTCTTTGGGTCCTA+CGG - chr4_4:63135370-63135389 Msa0693880:intron 55.0%
TCCAGCACTTGGGTACCCAT+TGG - chr4_4:63135467-63135486 Msa0693880:intron 55.0%
ACCAATGGGTACCCAAGTGC+TGG + chr4_4:63135471-63135490 None:intergenic 55.0%
AGCACTTGGGTACCCATTGG+TGG - chr4_4:63135470-63135489 Msa0693880:intron 55.0%
ACCTCCGGCCAATCAGATAC+CGG + chr4_4:63135614-63135633 None:intergenic 55.0%
GGCCGGAGGTTGCATAACTT+CGG - chr4_4:63135624-63135643 Msa0693880:CDS 55.0%
!! GGAAGTGTTCAGTCTCTGGC+TGG - chr4_4:63135822-63135841 Msa0693880:CDS 55.0%
TGTTCAGTCTCTGGCTGGCA+TGG - chr4_4:63135827-63135846 Msa0693880:CDS 55.0%
GAACCACCGCCTTCTCTCGA+CGG - chr4_4:63129801-63129820 Msa0693880:three_prime_UTR 60.0%
GGAGTTCCGTCGAGAGAAGG+CGG + chr4_4:63129810-63129829 None:intergenic 60.0%
GAGGAAGGGGAAGAGGAGGA+GGG + chr4_4:63129849-63129868 None:intergenic 60.0%
AGAGGAAGGGGAAGAGGAGG+AGG + chr4_4:63129850-63129869 None:intergenic 60.0%
GGAAGAGGAAGGGGAAGAGG+AGG + chr4_4:63129853-63129872 None:intergenic 60.0%
GCGTGGAGACGAAGAGGAAG+AGG + chr4_4:63129868-63129887 None:intergenic 60.0%
TCGTCTCCACGCGGTTCCAA+AGG - chr4_4:63129876-63129895 Msa0693880:CDS 60.0%
!! AGATGGCGGTGCTGTCGATG+CGG + chr4_4:63129931-63129950 None:intergenic 60.0%
CACGCGCACGGATACCGTAA+CGG + chr4_4:63130029-63130048 None:intergenic 60.0%
ATACTGCCGCTACACGCGCA+CGG + chr4_4:63130041-63130060 None:intergenic 60.0%
GGAGTTTCGGTGAAGCCCAG+AGG - chr4_4:63130807-63130826 Msa0693880:intron 60.0%
GAAATGGTGCCCGGGTTGCT+AGG - chr4_4:63131002-63131021 Msa0693880:intron 60.0%
GGTGCAGCACAAGGAGTTGC+GGG - chr4_4:63131082-63131101 Msa0693880:intron 60.0%
GTGCAGCACAAGGAGTTGCG+GGG - chr4_4:63131083-63131102 Msa0693880:intron 60.0%
TGCAGCACAAGGAGTTGCGG+GGG - chr4_4:63131084-63131103 Msa0693880:intron 60.0%
GATGCAAGCAGCACGTCTCG+AGG - chr4_4:63131156-63131175 Msa0693880:CDS 60.0%
GGATGACGCTGATGGAGCAG+AGG - chr4_4:63131207-63131226 Msa0693880:CDS 60.0%
GGTGGCAAGCCAGAAACACC+AGG + chr4_4:63131476-63131495 None:intergenic 60.0%
TTCCCCTGATGTGTGGGTGG+TGG - chr4_4:63132651-63132670 Msa0693880:CDS 60.0%
AGCCACCACCCACACATCAG+GGG + chr4_4:63132656-63132675 None:intergenic 60.0%
GAGCCACCACCCACACATCA+GGG + chr4_4:63132657-63132676 None:intergenic 60.0%
TTGGATCAGCCGGATCCCGA+AGG + chr4_4:63132944-63132963 None:intergenic 60.0%
ACAGCAGTTGGTTGGGCGCT+TGG - chr4_4:63133343-63133362 Msa0693880:CDS 60.0%
! ACAAGCAGGGGTGCACGATC+AGG - chr4_4:63133459-63133478 Msa0693880:CDS 60.0%
! CAAGCAGGGGTGCACGATCA+GGG - chr4_4:63133460-63133479 Msa0693880:CDS 60.0%
! AGGGGTGCACGATCAGGGTA+TGG - chr4_4:63133465-63133484 Msa0693880:CDS 60.0%
TCTCCAGGCTGCAGGGTCTT+TGG - chr4_4:63135361-63135380 Msa0693880:intron 60.0%
CTCCAGGCTGCAGGGTCTTT+GGG - chr4_4:63135362-63135381 Msa0693880:intron 60.0%
GCAGGGTCTTTGGGTCCTAC+GGG - chr4_4:63135371-63135390 Msa0693880:intron 60.0%
! ACCGGTATCTGATTGGCCGG+AGG - chr4_4:63135610-63135629 Msa0693880:CDS 60.0%
GATCTCCATCGCCGAGTCCG+CGG + chr4_4:63129775-63129794 None:intergenic 65.0%
GTTCCGTCGAGAGAAGGCGG+TGG + chr4_4:63129807-63129826 None:intergenic 65.0%
! AGAGGAGGAGGGTGTGGTGG+CGG + chr4_4:63129838-63129857 None:intergenic 65.0%
! GGAAGAGGAGGAGGGTGTGG+TGG + chr4_4:63129841-63129860 None:intergenic 65.0%
AGGGGAAGAGGAGGAGGGTG+TGG + chr4_4:63129844-63129863 None:intergenic 65.0%
GGAACCGCGTGGAGACGAAG+AGG + chr4_4:63129874-63129893 None:intergenic 65.0%
CGGTATCCGTGCGCGTGTAG+CGG - chr4_4:63130032-63130051 Msa0693880:CDS 65.0%
ATGGTGCCCGGGTTGCTAGG+AGG - chr4_4:63131005-63131024 Msa0693880:intron 65.0%
AGCAGGCCTCCTAGCAACCC+GGG + chr4_4:63131014-63131033 None:intergenic 65.0%
CAGCAGGCCTCCTAGCAACC+CGG + chr4_4:63131015-63131034 None:intergenic 65.0%
CGAGCCACCACCCACACATC+AGG + chr4_4:63132658-63132677 None:intergenic 65.0%
GACCCAAAGACCCTGCAGCC+TGG + chr4_4:63135367-63135386 None:intergenic 65.0%
!! GAGGGTGTGGTGGCGGCGAT+TGG + chr4_4:63129831-63129850 None:intergenic 70.0%
!! TGGCGGTGCTGTCGATGCGG+TGG + chr4_4:63129928-63129947 None:intergenic 70.0%
CGGGTTGCTAGGAGGCCTGC+TGG - chr4_4:63131013-63131032 Msa0693880:intron 70.0%
GCACAAGGAGTTGCGGGGGC+AGG - chr4_4:63131088-63131107 Msa0693880:intron 70.0%
! CTCCACGGACTCGGTCGCCG+CGG - chr4_4:63129755-63129774 Msa0693880:three_prime_UTR 75.0%
! GGACTCGGTCGCCGCGGACT+CGG - chr4_4:63129761-63129780 Msa0693880:three_prime_UTR 75.0%
! GTCCGCGGCGACCGAGTCCG+TGG + chr4_4:63129760-63129779 None:intergenic 80.0%
! GGTCGCCGCGGACTCGGCGA+TGG - chr4_4:63129767-63129786 Msa0693880:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 63129430 63136210 63129430 ID=Msa0693880;Name=Msa0693880
chr4_4 mRNA 63129430 63136210 63129430 ID=Msa0693880-mRNA-1;Parent=Msa0693880;Name=Msa0693880-mRNA-1;_AED=0.02;_eAED=0.02;_QI=356|1|1|1|1|1|9|422|1112
chr4_4 exon 63129430 63130355 63129430 ID=Msa0693880-mRNA-1:exon:17711;Parent=Msa0693880-mRNA-1
chr4_4 exon 63131147 63131293 63131147 ID=Msa0693880-mRNA-1:exon:17710;Parent=Msa0693880-mRNA-1
chr4_4 exon 63131405 63131568 63131405 ID=Msa0693880-mRNA-1:exon:17709;Parent=Msa0693880-mRNA-1
chr4_4 exon 63131651 63131811 63131651 ID=Msa0693880-mRNA-1:exon:17708;Parent=Msa0693880-mRNA-1
chr4_4 exon 63132068 63132418 63132068 ID=Msa0693880-mRNA-1:exon:17707;Parent=Msa0693880-mRNA-1
chr4_4 exon 63132514 63132725 63132514 ID=Msa0693880-mRNA-1:exon:17706;Parent=Msa0693880-mRNA-1
chr4_4 exon 63132814 63133581 63132814 ID=Msa0693880-mRNA-1:exon:17705;Parent=Msa0693880-mRNA-1
chr4_4 exon 63134343 63135035 63134343 ID=Msa0693880-mRNA-1:exon:17704;Parent=Msa0693880-mRNA-1
chr4_4 exon 63135516 63136210 63135516 ID=Msa0693880-mRNA-1:exon:17703;Parent=Msa0693880-mRNA-1
chr4_4 five_prime_UTR 63135855 63136210 63135855 ID=Msa0693880-mRNA-1:five_prime_utr;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63135516 63135854 63135516 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63134343 63135035 63134343 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63132814 63133581 63132814 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63132514 63132725 63132514 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63132068 63132418 63132068 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63131651 63131811 63131651 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63131405 63131568 63131405 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63131147 63131293 63131147 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 CDS 63129852 63130355 63129852 ID=Msa0693880-mRNA-1:cds;Parent=Msa0693880-mRNA-1
chr4_4 three_prime_UTR 63129430 63129851 63129430 ID=Msa0693880-mRNA-1:three_prime_utr;Parent=Msa0693880-mRNA-1
Gene Sequence

>Msa0693880

ATGGAGATCGCTAACGAACCACCGCCTTCTCTCGACGGAACTCCAATCGCCGCCACCACACCCTCCTCCTCTTCCCCTTCCTCTTCCTCTTCGTCTCCACGCGGTTCCAAAGGAAAGGAGATCGATGCGGATGCGGTCGCCACCGCATCGACAGCACCGCCATCTGCAAAATACGATGACGACGATGAAGATGAAGAGGATGTTTGCCGTATTTGTCGGAACCCTGGTGATGCTGATAATCCGTTACGGTATCCGTGCGCGTGTAGCGGCAGTATCAAATTTGTTCATCAAGATTGTCTCCTTCAGTGGCTTAATCATAGCAACGCTCGTCAATGCGAGGTTTGCAAGCATCCATTTTCCTTCTCACCTGTTTATGCAGAGAATGCTCCTGCTAGGTTGCCTTTTCAAGAGTTTGTGGTGGGAATGGCGATGAAAGCTTGTCATGTTCTGCAGTTCTTTGTGCGTCTGAGTTTTGTGCTGTCTGTGTGGCTCTTAATTATACCTTTCATAACATTCTGGATATGGAGGTTAGCTTTTGTGAGGAGTTTCGGTGAAGCCCAGAGGTTATTCTTGAATCATTTATCAACGGCGGTTATTCTGACTGATTGCCTCCATGGTTTCCTGCTTTCTGCAAGCATTGTCTTCATTTTTCTTGGGGCTACTTCTTTGAGAGATTACTTTAGGCATTTAAGAGAAATTGGGGGACAGGATGCGGATAGAGAAGATGAAGTGGACAGAAATGGTGCCCGGGTTGCTAGGAGGCCTGCTGGACAAGCTAATCGTAATGTTAATGGTGATGCAAATGGAGAAGATGCTGGTGCAGCACAAGGAGTTGCGGGGGCAGGTCAAGTAATTAGAAGGAATGCTGAAAATGTTGCTGCGCGATGGGAGATGCAAGCAGCACGTCTCGAGGCGCATGTTGAACAGATGTTTGATGGTCTGGATGACGCTGATGGAGCAGAGGATGTACCCTTTGATGAACTTGTTGGCATGCAGGGTCCGGTTTTTCATTTGGTTGAAAATGCATTTACGGTGCTGGCAAGCAATATGATTTTCCTTGGAGTTGTAATCTTTCTGCCTTTCTCATTGGGTCGCATAATTCTTCATTATCTATCATGGTTCTTTTCAACTGGTAGCGATGCGGTGTTATCGGTGGTAGTCCCACCTACAGACACTTCTCTTTCCCTAGCCAATATTACATTAAAAAATGCATTAACAGCTGTTCAAAATTTATCAACTGCTACTCAAGAAAGTGGATCAGTTGGTCAGATTGCAGAAATGCTAAAAGTGAATGCAAGTGAATTGAGTGAAATGTCGAACAACATAACTGCATCTGTTTCAGATGATCTCTTGAAAGGAGGGTCAATTGGAACTTCCAGGATTTCTGATGTTACTACTTTGGCAGTTGGATATATTTTCCTATCGACTCTAATTTTCTGCTACTTCGGTATTGTTGCGTTAATTCGCTACACAAAGGGTGAACCTTTGACTGCAGGAAGATTTTATGGTATTGCTTCTATAGCAGAGACAATTCCATCTCTCTTCAGGCAGTTTTTAGCAGCAATGAGGCATTTGATGACCATGGTGAAGGTGGCTTTCCTATTAGTTATTGAATTAGGGGTATTTCCCCTGATGTGTGGGTGGTGGCTCGATGTTTGCACCATACAGATGTTTGGGAAGACAATGGTTCACAGAGCTCAGTTCTTCTCTGCTTCTCCTTTAGCAAGCTCATTGGCTCATTGGGTTGTAGGGATCGTGTACATGCTACAAATTAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGGAATGGGGTTTTGTACTTCCTTCGGGATCCGGCTGATCCAAACTATAATCCATTCCGTGATCTGATAGATGATCCTGTGCACAAACATGCTCGCAGGGTTTTGTTATCTGTTGCGGTTTATGGGAGTTTGATTGTTATGCTGGTATTTTTGCCAGTTAAACTTGCAATGCGGATGGCACCTTCCATTTTTCCACTTGAAATATTGCTATCTGATCCCTTCACCGAAATTCCAGCTAACATGCTTCTCTTTCAGATCTGTATACCATTTGCTATTGAGCATTTTAAACTCAGGACAACTATCAAATCCCTTCTTCGCTATTGGTTTACAGCAGTTGGTTGGGCGCTTGGTTTAACTGATTTCTTATTGCCTAGACCTGATGACAATGGTAATCAAGAAAATGGAAATGGGGAGCGAGGTAGGCAGGAAAGGTTACAGATAGTACAAGCAGGGGTGCACGATCAGGGTATGGTTCCATTTGCTGGCGATGATTTGAACAGAGTCACTAATGCAGATGCTGGAGAGGATTACGACAGCGACGAACAACCTGATTCTGACAGTTATGCCTTTGCACTTCGCATTGTTCTTCTGCTGGTCATTGCTTGGATGACACTCCTTGTCTTCAACTCTGCCCTGGTAGTTGTACCAATATCACTGGGAAGGATACTTTTCAACTCCATTCCTCGTCTTCCTATAACTCATGGCATTAAGTGCAATGATCTGTATGCCTTCATCATTGGAAGTTATGTGATCTGGACTGCTGTTGCTGGAGTTAGATACTCAATCGAGCAAATTAGAAAACGGAGGACTTCAGTTTTGTTGAACCAAATTTGGAAGTGGTGTAGCATTGTTGTCAAGAGTTCTGCCCTTTTGTCTATATGGATATTTGTCATCCCAGTGCTGATTGGGCTTCTCTTTGAGCTTTTGGTCATTGTGCCAATGAGAGTTCCGGTGGATGAAAGTCCAGTATTCCTCCTTTATCAAGACTGGGCATTGGGCCTTATATTTCTCAAGATATGGACTAGATTGGTTATGTTGGACCACATGATGCCTCTAATGGATGAAAGTTGGCGAGTAAAGTTTGAGAGGGTGAGAGATGATGGTTTCTCCAGGCTGCAGGGTCTTTGGGTCCTACGGGAGATTGTTCTTCCAATCATAATGAAACTATTGACAGCGTTATGTGTACCTTATGTTTTGGCCAGAGGTGTGTTTCCAGCACTTGGGTACCCATTGGTGGTCAATTCTGCTGTCTATCGATTTGCATGGTTGGGATGCCTCTCTTTCAGTTTCGTGTGTTTTTGTGCCAAGAGATTTCATGTCTGGTTCACAAATCTCCACAATTCAATTCGTGATGACCGGTATCTGATTGGCCGGAGGTTGCATAACTTCGGAGAACATGTTGAGAAAGCAAATGAAGCTGCAACTTCTACAGGAGTGCAGGATGCTATTTTACTTGGTCCAAATATAAATCAACAAGATCGTGATGCAGATGTTGGACTTCGATTGAGGCACGTAAATCAACAGGCGGTCTGA
Protein sequence

>Msa0693880

MEIANEPPPSLDGTPIAATTPSSSSPSSSSSSPRGSKGKEIDADAVATASTAPPSAKYDDDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFVRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQRLFLNHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDADREDEVDRNGARVARRPAGQANRNVNGDANGEDAGAAQGVAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFLPFSLGRIILHYLSWFFSTGSDAVLSVVVPPTDTSLSLANITLKNALTAVQNLSTATQESGSVGQIAEMLKVNASELSEMSNNITASVSDDLLKGGSIGTSRISDVTTLAVGYIFLSTLIFCYFGIVALIRYTKGEPLTAGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRAQFFSASPLASSLAHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLEILLSDPFTEIPANMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPRPDDNGNQENGNGERGRQERLQIVQAGVHDQGMVPFAGDDLNRVTNADAGEDYDSDEQPDSDSYAFALRIVLLLVIAWMTLLVFNSALVVVPISLGRILFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGVRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLMDESWRVKFERVRDDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPALGYPLVVNSAVYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVEKANEAATSTGVQDAILLGPNINQQDRDADVGLRLRHVNQQAV*