AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082940 MtrunA17_Chr7g0270801 98.260 862 7 2 1 855 1 861 0.0 1722
Msa1082940 MtrunA17_Chr3g0122081 23.088 706 437 21 176 802 56 734 7.26e-32 133
Msa1082940 MtrunA17_Chr8g0338351 21.662 734 470 22 156 815 36 738 1.45e-30 129
Msa1082940 MtrunA17_Chr1g0206271 21.637 684 449 18 179 802 55 711 1.12e-18 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082940 AT4G01810.3 76.559 866 166 8 16 854 24 879 0.0 1328
Msa1082940 AT4G01810.1 76.559 866 166 8 16 854 24 879 0.0 1328
Msa1082940 AT4G01810.2 76.559 866 166 8 16 854 24 879 0.0 1328
Msa1082940 AT2G21630.1 21.909 744 483 20 141 812 22 739 6.76e-28 121
Msa1082940 AT3G23660.1 22.897 725 470 21 145 802 26 728 1.22e-27 120
Msa1082940 AT4G14160.2 22.461 699 445 21 176 802 62 735 1.80e-27 119
Msa1082940 AT4G14160.1 22.857 700 442 22 176 802 62 736 3.53e-27 119
Msa1082940 AT3G23660.2 22.667 750 467 23 145 802 26 754 1.34e-25 114
Msa1082940 AT5G43670.1 22.452 726 453 21 172 802 49 759 2.21e-22 103
Msa1082940 AT4G14160.3 22.662 556 351 17 176 673 62 596 3.30e-20 96.3

Find 260 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTGAAGGCTTTGCTTTA+TGG 0.139676 7_2:+83113627 Msa1082940:CDS
TTAATTTATAAAACCTTAAA+AGG 0.163203 7_2:+83116769 Msa1082940:three_prime_UTR
AAGGATATTGGTCTAAAATT+TGG 0.164264 7_2:+83114569 Msa1082940:CDS
GACTTACAGTCACAAGTTTC+TGG 0.167719 7_2:+83112646 Msa1082940:CDS
CCACTATTGGGATGCATTAT+TGG 0.182224 7_2:+83114677 Msa1082940:CDS
GCATCTGCTGATGTGCTTCC+TGG 0.200862 7_2:+83113582 Msa1082940:CDS
CAAAAGATGCATTTAGAAAT+AGG 0.208765 7_2:-83114730 None:intergenic
GGTTGCTCTTGCTATAATTC+AGG 0.239657 7_2:+83113779 Msa1082940:CDS
TTTAAGATAGGAACTCTTAC+AGG 0.250263 7_2:-83114032 None:intergenic
GCCGGTGGACCGAACACTTA+TGG 0.263379 7_2:+83113870 Msa1082940:CDS
TTGAAATGGATGGAGAATTT+AGG 0.277803 7_2:+83113954 Msa1082940:CDS
ATGGTTGACTTTGTTCAAAC+TGG 0.284715 7_2:+83113348 Msa1082940:CDS
TCTTTCTGTAATTGTAATAT+TGG 0.289656 7_2:-83112430 None:intergenic
CGGCGTCAATGATGAAAATA+TGG 0.290989 7_2:-83113700 None:intergenic
CCTACAGTAGATAGTGTTTC+GGG 0.298307 7_2:+83114428 Msa1082940:CDS
AACTACTGGTGCAGACATTC+TGG 0.301882 7_2:-83113406 None:intergenic
CCACCCTAATTATCCGTATA+TGG 0.302828 7_2:+83113920 Msa1082940:CDS
CAATGCCCCAAAACCCAAAC+TGG 0.316290 7_2:-83113106 None:intergenic
TTGGTTCTTCATGATGATTT+TGG 0.319030 7_2:+83114083 Msa1082940:CDS
ACAAGCAAATGTACCCAGTT+TGG 0.324194 7_2:+83113092 Msa1082940:CDS
TTTCCATATACGGATAATTA+GGG 0.335818 7_2:-83113923 None:intergenic
CATCTGCTGATGTGCTTCCT+GGG 0.336370 7_2:+83113583 Msa1082940:CDS
TCTGGTACGTTCAACTTATA+CGG 0.339293 7_2:-83113720 None:intergenic
AAAAGCATCAGGTGGAGTTT+TGG 0.348973 7_2:+83114064 Msa1082940:CDS
ACAGAGCTTCGCTCTCTCTA+TGG 0.349880 7_2:+83114301 Msa1082940:CDS
GGGGATCGCGCTGTATTACC+TGG 0.351569 7_2:-83113161 None:intergenic
AATGTACCCAGTTTGGGTTT+TGG 0.352094 7_2:+83113099 Msa1082940:CDS
GCCTACAGTAGATAGTGTTT+CGG 0.357522 7_2:+83114427 Msa1082940:CDS
AAAGGAGCTTTCTCTCTTAC+CGG 0.359772 7_2:+83114628 Msa1082940:CDS
CAAGCAAATGTACCCAGTTT+GGG 0.360268 7_2:+83113093 Msa1082940:CDS
TCTCAGGAGAGGGCCACTAT+TGG 0.360541 7_2:+83114664 Msa1082940:CDS
GGGATATCTTGAAAGTGTTC+AGG 0.362371 7_2:+83114448 Msa1082940:CDS
ACAAGTTTCTGGTGGCTTAG+AGG 0.363880 7_2:+83112657 Msa1082940:CDS
TATAAAACCTTAAAAGGTCT+TGG 0.372507 7_2:+83116775 Msa1082940:three_prime_UTR
CACCGATCTCTGGAAGCTTC+TGG 0.373407 7_2:-83113738 None:intergenic
AACAGCCACTGAATGGTTCT+TGG 0.376140 7_2:-83114516 None:intergenic
TCCGTGGGAGCCTGCTGATC+TGG 0.377406 7_2:-83114141 None:intergenic
ATGTTATCATAGAGCAATAA+AGG 0.382055 7_2:+83117003 Msa1082940:three_prime_UTR
CGCATCCATTCACAGAAACT+TGG 0.382554 7_2:-83116676 None:intergenic
GATGGGATGAACCCAACATT+AGG 0.384059 7_2:-83112310 None:intergenic
ATAATTCCTAATCTTGTTGT+TGG 0.386425 7_2:-83113510 None:intergenic
GTCACCAATGCATGCTTCAC+TGG 0.387009 7_2:+83113665 Msa1082940:CDS
TTGAATACTGAATTGCAAAC+TGG 0.388045 7_2:-83114361 None:intergenic
ATCACTCAAGTTGTGGGTCC+AGG 0.390955 7_2:+83114197 Msa1082940:CDS
AGTTCCTAGGCACCGATCTC+TGG 0.396441 7_2:-83113748 None:intergenic
GGTAAGAGAGAAAGCTCCTT+TGG 0.396517 7_2:-83114626 None:intergenic
GACATTCTGGAATCTGAAAC+TGG 0.397143 7_2:-83113393 None:intergenic
AGATTAGGAATTATACTATA+TGG 0.397844 7_2:+83113519 Msa1082940:CDS
TCCTCGTATCCTTGCATTCA+AGG 0.399565 7_2:+83116330 Msa1082940:CDS
GATGAAAGAATCAAGGATAT+TGG 0.400096 7_2:+83114557 Msa1082940:CDS
CCGGTGGACCGAACACTTAT+GGG 0.402191 7_2:+83113871 Msa1082940:CDS
TTTGCAAGAGGATTTAAGAT+AGG 0.402810 7_2:-83114044 None:intergenic
ACCATTGGTGAAGATAGTTC+TGG 0.403758 7_2:-83113330 None:intergenic
GGGCATTGGTCTCTCCTGGT+AGG 0.404383 7_2:+83113121 Msa1082940:CDS
ATGGAACTGATGTCTTCATT+TGG 0.415608 7_2:+83114870 Msa1082940:CDS
CTAGTTGAAGGAGGAGGAGG+AGG 0.416355 7_2:-83112376 None:intergenic
TTTGGGGCATTGGTCTCTCC+TGG 0.416619 7_2:+83113117 Msa1082940:CDS
ACAAAGGATGACTCTCCATT+TGG 0.416965 7_2:-83112688 None:intergenic
CGAGGGGTTGTCAAAAGGTC+AGG 0.419375 7_2:+83113822 Msa1082940:CDS
TCAAAAGTGAACAAAATGAA+TGG 0.421037 7_2:-83116886 None:intergenic
GCACGGACCTCTCATCTTCA+TGG 0.423564 7_2:-83114700 None:intergenic
CTCCCTCCAACAACAAGATT+AGG 0.425059 7_2:+83113504 Msa1082940:CDS
GTGTTGTTTACCTGCTCATA+AGG 0.426814 7_2:-83116500 None:intergenic
AAGGCTTTGCTTTATGGTAC+AGG 0.428062 7_2:+83113633 Msa1082940:CDS
GTCTTCTGCATTAGGTGATT+CGG 0.428515 7_2:+83116742 Msa1082940:three_prime_UTR
TGGAAAAGACAGCATTGAAA+TGG 0.428902 7_2:+83113940 Msa1082940:CDS
TTCTGTAATTGTAATATTGG+TGG 0.430203 7_2:-83112427 None:intergenic
ACGATCCAAGTTTCTGTGAA+TGG 0.430684 7_2:+83116671 Msa1082940:CDS
GGCTCATCGACACAATATAT+TGG 0.432834 7_2:+83113983 Msa1082940:CDS
TGCAACATATTGCTTGGATC+AGG 0.433218 7_2:+83113222 Msa1082940:CDS
GGGGTACTCAAGTGAGGAAC+TGG 0.436654 7_2:-83112478 None:intergenic
GACCGGTAGTCTTCTGCATT+AGG 0.439897 7_2:+83116734 Msa1082940:three_prime_UTR
GAGGAACGAGCCGGCGGCTG+AGG 0.441389 7_2:-83112571 None:intergenic
GGAATGGCAGCTGGACGGAC+AGG 0.443534 7_2:-83112526 None:intergenic
CTCCTCGTTGTCTAATGCAC+AGG 0.443595 7_2:+83114774 Msa1082940:CDS
CCTCTTTAGTCATTGTCTCA+TGG 0.445505 7_2:+83117077 Msa1082940:three_prime_UTR
AATATTGGTGGAGGAAATCT+AGG 0.445589 7_2:-83112415 None:intergenic
CCAATAATGCATCCCAATAG+TGG 0.447762 7_2:-83114677 None:intergenic
GTTGCTCTTGCTATAATTCA+GGG 0.450113 7_2:+83113780 Msa1082940:CDS
CAAAAGTGAACAAAATGAAT+GGG 0.450629 7_2:-83116885 None:intergenic
TTGTCTAATGCACAGGGAGG+GGG 0.451959 7_2:+83114781 Msa1082940:CDS
ACAAAACATGCAAACAAACT+TGG 0.453073 7_2:-83116803 None:intergenic
TCGCCACCACGTTACTCAAA+TGG 0.453714 7_2:+83112616 Msa1082940:CDS
AGGGCGTCTGCCAGATCAGC+AGG 0.454933 7_2:+83114131 Msa1082940:CDS
CCCATAAGTGTTCGGTCCAC+CGG 0.456496 7_2:-83113871 None:intergenic
ACCCAACATTAGGTTGTGTT+GGG 0.461867 7_2:-83112300 None:intergenic
GTAAGAGAGAAAGCTCCTTT+GGG 0.462126 7_2:-83114625 None:intergenic
ACCCAACACAACCTAATGTT+GGG 0.462638 7_2:+83112299 Msa1082940:CDS
TCACTTGGTGACTTGTCCCC+AGG 0.464133 7_2:-83113600 None:intergenic
ATATATTGCAACATATTGCT+TGG 0.465612 7_2:+83113216 Msa1082940:CDS
CTAAAGAGGTAAGGGAAGAA+TGG 0.469518 7_2:-83117063 None:intergenic
AATCCTCTTGCAAAAGCATC+AGG 0.471518 7_2:+83114053 Msa1082940:CDS
GCCGGCGGCTGAGGCGAAGC+GGG 0.473144 7_2:-83112562 None:intergenic
AACTGATGTCTTCATTTGGC+TGG 0.475952 7_2:+83114874 Msa1082940:CDS
GGCATTGGTCTCTCCTGGTA+GGG 0.478728 7_2:+83113122 Msa1082940:CDS
TAAAGAGGTAAGGGAAGAAT+GGG 0.480887 7_2:-83117062 None:intergenic
GGACCGAACACTTATGGGCC+TGG 0.482136 7_2:+83113876 Msa1082940:CDS
TGTAATTGTAATATTGGTGG+AGG 0.482734 7_2:-83112424 None:intergenic
TTTGGCTGCATGCAGGACAT+TGG 0.483530 7_2:+83116276 Msa1082940:CDS
AACCCAACATTAGGTTGTGT+TGG 0.484804 7_2:-83112301 None:intergenic
ATACTAGTTGAAGGAGGAGG+AGG 0.484811 7_2:-83112379 None:intergenic
CCTCACTTGAGTACCCCTCC+TGG 0.485475 7_2:+83112484 Msa1082940:CDS
AACCCAACACAACCTAATGT+TGG 0.487252 7_2:+83112298 Msa1082940:CDS
CTTCTGCTTTGGCTGCATGC+AGG 0.488388 7_2:+83116269 Msa1082940:CDS
CGTTGTCTAATGCACAGGGA+GGG 0.490233 7_2:+83114779 Msa1082940:CDS
CCCCATCGCTGTCAAAGCTG+TGG 0.491378 7_2:+83113180 Msa1082940:CDS
ATGTTAACGTCCTAAGTTGT+GGG 0.494007 7_2:-83116606 None:intergenic
AGACAATGACTAAAGAGGTA+AGG 0.494583 7_2:-83117072 None:intergenic
TCTACATGAGACTCTTCCCC+TGG 0.495012 7_2:-83114215 None:intergenic
ATTCCTAATCTTGTTGTTGG+AGG 0.495311 7_2:-83113507 None:intergenic
TTCAGTGGCTGTTGATATGC+GGG 0.499486 7_2:+83114526 Msa1082940:CDS
CAACCTCAACAGCAGTTCCT+AGG 0.500091 7_2:-83113761 None:intergenic
GATGTAAATACAGGAGGTCC+AGG 0.503739 7_2:-83112502 None:intergenic
CCATGAGACAATGACTAAAG+AGG 0.505187 7_2:-83117077 None:intergenic
TTCCTAATCTTGTTGTTGGA+GGG 0.508270 7_2:-83113506 None:intergenic
GGTGCTAAAATACTAGTTGA+AGG 0.508863 7_2:-83112388 None:intergenic
TCATCTATTACAAGAACTAC+TGG 0.509134 7_2:-83113420 None:intergenic
TGGAACAAAACCAGGTCGCT+TGG 0.509710 7_2:-83113373 None:intergenic
GCCCTCTCCTGAGATGGAAA+AGG 0.510725 7_2:-83114655 None:intergenic
CCAGTTGAGACCTCCCTACC+AGG 0.512854 7_2:-83113135 None:intergenic
GTTGTCTAATGCACAGGGAG+GGG 0.514617 7_2:+83114780 Msa1082940:CDS
CCCATCGCTGTCAAAGCTGT+GGG 0.516182 7_2:+83113181 Msa1082940:CDS
AGTCATTGTCTCATGGAAAG+TGG 0.517302 7_2:+83117084 Msa1082940:three_prime_UTR
AAAGAATGAGGAACAGATCC+AGG 0.517901 7_2:-83113894 None:intergenic
AACAATAGATGAAAGAATCA+AGG 0.519486 7_2:+83114550 Msa1082940:CDS
TGTCTCGAGGGGTTGTCAAA+AGG 0.519625 7_2:+83113817 Msa1082940:CDS
CCCCACAGCTTTGACAGCGA+TGG 0.520772 7_2:-83113182 None:intergenic
ATTGGTCTCTCCTGGTAGGG+AGG 0.521739 7_2:+83113125 Msa1082940:CDS
CCCACAGCTTTGACAGCGAT+GGG 0.523958 7_2:-83113181 None:intergenic
CAAGGATCCTCCTTATGAGC+AGG 0.524003 7_2:+83116490 Msa1082940:CDS
TCACTCAAGTTGTGGGTCCA+GGG 0.527829 7_2:+83114198 Msa1082940:CDS
TCCAGAACTATCTTCACCAA+TGG 0.527850 7_2:+83113329 Msa1082940:CDS
GCCTTCAGAGAATCTTCACT+TGG 0.528830 7_2:-83113615 None:intergenic
TATTCTCATCACTCAAGTTG+TGG 0.529391 7_2:+83114190 Msa1082940:CDS
TTGGTTGATATATTATGTGC+TGG 0.530155 7_2:+83114002 Msa1082940:CDS
TTAGAGGATCATATTCCAAA+TGG 0.531231 7_2:+83112673 Msa1082940:CDS
GCCAGATCAGCAGGCTCCCA+CGG 0.532333 7_2:+83114140 Msa1082940:CDS
GACATATAACACATTGCCAC+TGG 0.532814 7_2:-83113245 None:intergenic
GCTGAACTTGTAGCCGATGA+AGG 0.532973 7_2:+83116238 Msa1082940:CDS
ACCGGTCATCAACTCGGTTG+AGG 0.534312 7_2:-83116718 None:intergenic
CGGACAGGAGATGTAAATAC+AGG 0.535127 7_2:-83112511 None:intergenic
ATTCTCATCACTCAAGTTGT+GGG 0.536006 7_2:+83114191 Msa1082940:CDS
GTGAGGAACTGGACTGCCAT+TGG 0.536352 7_2:-83112467 None:intergenic
CATCTGCTGATCTGTCTCGA+GGG 0.536757 7_2:+83113805 Msa1082940:CDS
GTTCGAAAAGGAATGGCAGC+TGG 0.537523 7_2:-83112535 None:intergenic
CTTTGGCGTTAATTTACAAA+GGG 0.539608 7_2:+83114112 Msa1082940:CDS
TGGTTGACTTTGTTCAAACT+GGG 0.540753 7_2:+83113349 Msa1082940:CDS
GATCCAGGCCCATAAGTGTT+CGG 0.541419 7_2:-83113879 None:intergenic
AGGCAAGGTTCCCACAACTT+AGG 0.541674 7_2:+83116596 Msa1082940:CDS
CACCTAATGCAGAAGACTAC+CGG 0.544525 7_2:-83116736 None:intergenic
CCATCTGCTGATCTGTCTCG+AGG 0.546084 7_2:+83113804 Msa1082940:CDS
GGGATCGCGCTGTATTACCT+GGG 0.546622 7_2:-83113160 None:intergenic
AAAGACAGCATTGAAATGGA+TGG 0.546652 7_2:+83113944 Msa1082940:CDS
TGTACCAGGCTGATGTCTCA+AGG 0.547620 7_2:+83114387 Msa1082940:CDS
GGATACGAGGAGCTGGAAAA+CGG 0.547993 7_2:-83116318 None:intergenic
AAAACAGGAGGGTAGCTCGC+AGG 0.549688 7_2:+83116433 Msa1082940:intron
GAAAACTGACCTTGAATGCA+AGG 0.551532 7_2:-83116339 None:intergenic
CTGAGATGGAAAAGGAGCTC+CGG 0.552188 7_2:-83114647 None:intergenic
AGTCGTACACCGACACGGTA+CGG 0.552372 7_2:-83113542 None:intergenic
TACCAGAAGCTTCCAGAGAT+CGG 0.552628 7_2:+83113736 Msa1082940:CDS
TGATCTATCTCTCAGAATGG+TGG 0.553190 7_2:+83114751 Msa1082940:CDS
GCATATCAACAGCCACTGAA+TGG 0.553857 7_2:-83114523 None:intergenic
AGTAGAATTATTGTCTGTGC+CGG 0.554452 7_2:+83113852 Msa1082940:CDS
AAAACTTCATTGTTTCCCAA+AGG 0.556109 7_2:+83114610 Msa1082940:CDS
GCTTCCAGAGATCGGTGCCT+AGG 0.556110 7_2:+83113744 Msa1082940:CDS
ATAGTGGCCCTCTCCTGAGA+TGG 0.556546 7_2:-83114661 None:intergenic
GAAGAGGCTGAGGAACGAGC+CGG 0.557105 7_2:-83112580 None:intergenic
AATGCAAGGATACGAGGAGC+TGG 0.557311 7_2:-83116325 None:intergenic
GATGTTAACGTCCTAAGTTG+TGG 0.558972 7_2:-83116607 None:intergenic
TAGAAATAGGTTCCTCAGCA+CGG 0.559759 7_2:-83114717 None:intergenic
CACTCAAGTTGTGGGTCCAG+GGG 0.560885 7_2:+83114199 Msa1082940:CDS
ACCTCAACCGAGTTGATGAC+CGG 0.561827 7_2:+83116717 Msa1082940:exon
ACTATATGGCCGTACCGTGT+CGG 0.562058 7_2:+83113533 Msa1082940:CDS
GACAATGACTAAAGAGGTAA+GGG 0.563003 7_2:-83117071 None:intergenic
CCTTTGTAAATTAACGCCAA+AGG 0.566259 7_2:-83114111 None:intergenic
AGAATTATTGTCTGTGCCGG+TGG 0.566565 7_2:+83113855 Msa1082940:CDS
GTTTGAACAAAGTCAACCAT+TGG 0.567196 7_2:-83113345 None:intergenic
TAAGGAGGATCCTTGTGAGC+TGG 0.568588 7_2:-83116482 None:intergenic
TGAATGGATGCGAAGTTTGA+AGG 0.569935 7_2:+83116687 Msa1082940:CDS
TGTCTAATGCACAGGGAGGG+GGG 0.572598 7_2:+83114782 Msa1082940:CDS
CTCGAGACAGATCAGCAGAT+GGG 0.572727 7_2:-83113803 None:intergenic
TCAGTATTCAAATGTGTACC+AGG 0.573423 7_2:+83114373 Msa1082940:CDS
TGCGCAGTTCTAACAATCCG+TGG 0.573517 7_2:-83114157 None:intergenic
ACCTTGAATGCAAGGATACG+AGG 0.575322 7_2:-83116331 None:intergenic
TTCTGCATTAGGTGATTCGG+TGG 0.575553 7_2:+83116745 Msa1082940:three_prime_UTR
AGCCGGCGGCTGAGGCGAAG+CGG 0.575683 7_2:-83112563 None:intergenic
AAAATACTAGTTGAAGGAGG+AGG 0.575861 7_2:-83112382 None:intergenic
GTGAACAAAATGAATGGGAG+AGG 0.576503 7_2:-83116880 None:intergenic
CCTTTGGCGTTAATTTACAA+AGG 0.578294 7_2:+83114111 Msa1082940:CDS
TAACGTGGTGGCGACGAGGT+TGG 0.579731 7_2:-83112607 None:intergenic
TTAGGGTGGTTAAAAGAATG+AGG 0.583364 7_2:-83113906 None:intergenic
CAAACTGGGACCAAGCGACC+TGG 0.585466 7_2:+83113363 Msa1082940:CDS
AGGAGCTGGAAAACGGAACT+CGG 0.585658 7_2:-83116311 None:intergenic
AAATGAAGACATCAGTTCCA+TGG 0.585675 7_2:-83114868 None:intergenic
GTGCCTAGGAACTGCTGTTG+AGG 0.588652 7_2:+83113758 Msa1082940:CDS
CCATATACGGATAATTAGGG+TGG 0.590910 7_2:-83113920 None:intergenic
ACGTCTCATACCAGCTCACA+AGG 0.591329 7_2:+83116472 Msa1082940:CDS
CGACGAGGTTGGCAAAGAAG+AGG 0.593237 7_2:-83112596 None:intergenic
ACAGCCAGTGAAGCATGCAT+TGG 0.593600 7_2:-83113669 None:intergenic
ACCAAGTGAAGATTCTCTGA+AGG 0.595515 7_2:+83113614 Msa1082940:CDS
AACTTGTGACTGTAAGTCAA+AGG 0.596093 7_2:-83112641 None:intergenic
GAGGGGTTGTCAAAAGGTCA+GGG 0.596155 7_2:+83113823 Msa1082940:CDS
AACAGCAGTATCAGACTGCA+TGG 0.601478 7_2:-83114837 None:intergenic
CTCTGAAGATGCTGTAAGTG+AGG 0.601963 7_2:-83113456 None:intergenic
GAAGCGGGTGAAGTTCGAAA+AGG 0.603900 7_2:-83112547 None:intergenic
TTGTTTACCTGCTCATAAGG+AGG 0.608131 7_2:-83116497 None:intergenic
ATCTGCTGATGTGCTTCCTG+GGG 0.608232 7_2:+83113584 Msa1082940:CDS
ATTCAGTGGCTGTTGATATG+CGG 0.608901 7_2:+83114525 Msa1082940:CDS
TTGAGTGATGAGAATATCGT+CGG 0.609074 7_2:-83114183 None:intergenic
CCTCGAGACAGATCAGCAGA+TGG 0.609962 7_2:-83113804 None:intergenic
GGGTGAAGTTCGAAAAGGAA+TGG 0.611406 7_2:-83112542 None:intergenic
GGTTGGCAAAGAAGAGGCTG+AGG 0.612080 7_2:-83112590 None:intergenic
GGATCGCGCTGTATTACCTG+GGG 0.612217 7_2:-83113159 None:intergenic
TCCTCGTTGTCTAATGCACA+GGG 0.614480 7_2:+83114775 Msa1082940:CDS
ATCTGCTGATCTGTCTCGAG+GGG 0.616232 7_2:+83113806 Msa1082940:CDS
AAGACTACCGGTCATCAACT+CGG 0.617722 7_2:-83116724 None:intergenic
TGAGTAACGTGGTGGCGACG+AGG 0.621614 7_2:-83112611 None:intergenic
TTAAGATAGGAACTCTTACA+GGG 0.623544 7_2:-83114031 None:intergenic
TTACAGTCACAAGTTTCTGG+TGG 0.623640 7_2:+83112649 Msa1082940:CDS
TGCATGGCAAGATCATAAGC+CGG 0.625214 7_2:-83114821 None:intergenic
GAGGCTGAGGAACGAGCCGG+CGG 0.625710 7_2:-83112577 None:intergenic
GAAAAGGAATGGCAGCTGGA+CGG 0.630753 7_2:-83112531 None:intergenic
TAAATACAGGAGGTCCAGGA+GGG 0.633212 7_2:-83112498 None:intergenic
GATCAAACTTCATCTGCCAA+TGG 0.633558 7_2:+83112451 Msa1082940:CDS
CCCGAAACACTATCTACTGT+AGG 0.633775 7_2:-83114428 None:intergenic
AAGATGAGAGGTCCGTGCTG+AGG 0.633786 7_2:+83114705 Msa1082940:CDS
CCTCTTGCAAAAGCATCAGG+TGG 0.634824 7_2:+83114056 Msa1082940:CDS
TGAAAGTGTTCAGGATGAAG+TGG 0.642203 7_2:+83114457 Msa1082940:CDS
ACTGCTGTTGTACTTGACCA+TGG 0.642492 7_2:+83114851 Msa1082940:CDS
TCTGAAACTGGAACAAAACC+AGG 0.643903 7_2:-83113381 None:intergenic
GGTGGAGGAAATCTAGGTGG+TGG 0.646706 7_2:-83112409 None:intergenic
GTACCAGGCTGATGTCTCAA+GGG 0.647899 7_2:+83114388 Msa1082940:CDS
GCTAAAATACTAGTTGAAGG+AGG 0.651512 7_2:-83112385 None:intergenic
GGTCATCAACTCGGTTGAGG+TGG 0.652167 7_2:-83116715 None:intergenic
TAGCATTTGAATATAAAGAG+CGG 0.653919 7_2:-83114264 None:intergenic
GCGCAGTTCTAACAATCCGT+GGG 0.656494 7_2:-83114156 None:intergenic
CGAAAACTGAATGCAAGTGA+TGG 0.657106 7_2:+83113267 Msa1082940:CDS
AATGCCCCAAAACCCAAACT+GGG 0.659386 7_2:-83113105 None:intergenic
CGACCCTTGAGACATCAGCC+TGG 0.660436 7_2:-83114391 None:intergenic
GTAAATACAGGAGGTCCAGG+AGG 0.661317 7_2:-83112499 None:intergenic
TCGTTGTCTAATGCACAGGG+AGG 0.663454 7_2:+83114778 Msa1082940:CDS
TTATTGGCCATGAAGATGAG+AGG 0.665625 7_2:+83114693 Msa1082940:CDS
TTGTGAGCTGGTATGAGACG+TGG 0.668618 7_2:-83116470 None:intergenic
CCAGGAGGGGTACTCAAGTG+AGG 0.670383 7_2:-83112484 None:intergenic
GCTCTCTCTATGGAAACCAA+AGG 0.671019 7_2:+83114311 Msa1082940:CDS
TATTGCTTGGATCAGGCCAG+TGG 0.671309 7_2:+83113229 Msa1082940:CDS
CCACAGCTTTGACAGCGATG+GGG 0.674421 7_2:-83113180 None:intergenic
GATGGAGAATTTAGGTCGCG+AGG 0.676010 7_2:+83113962 Msa1082940:CDS
AAATACAGGAGGTCCAGGAG+GGG 0.683733 7_2:-83112497 None:intergenic
GGGGTTGTCAAAAGGTCAGG+GGG 0.691190 7_2:+83113825 Msa1082940:CDS
ATTGGTGGAGGAAATCTAGG+TGG 0.691906 7_2:-83112412 None:intergenic
AGGGGTTGTCAAAAGGTCAG+GGG 0.692424 7_2:+83113824 Msa1082940:CDS
ACGAGCCAAGAACCATTCAG+TGG 0.695755 7_2:+83114511 Msa1082940:CDS
ACAGGAGATGTAAATACAGG+AGG 0.703342 7_2:-83112508 None:intergenic
GATCCATTTGAGTAACGTGG+TGG 0.707026 7_2:-83112619 None:intergenic
CCATCGCTGTCAAAGCTGTG+GGG 0.707531 7_2:+83113182 Msa1082940:CDS
AAGGATCCATTTGAGTAACG+TGG 0.710338 7_2:-83112622 None:intergenic
TGTGAGCTGGTATGAGACGT+GGG 0.714877 7_2:-83116469 None:intergenic
GATCGCGCTGTATTACCTGG+GGG 0.731713 7_2:-83113158 None:intergenic
TCCCTGTGCATTAGACAACG+AGG 0.756815 7_2:-83114776 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAAAAAATATAATT+TGG - chr7_2:83113005-83113024 None:intergenic 0.0%
!! TTAATTTATAAAACCTTAAA+AGG + chr7_2:83116769-83116788 Msa1082940:three_prime_UTR 10.0%
!!! AAATGTAGTATAATTGATTT+AGG - chr7_2:83115009-83115028 None:intergenic 15.0%
!!! AAAATTGTTGCATTTTATTT+TGG + chr7_2:83115357-83115376 Msa1082940:intron 15.0%
!! AAACAAAACAACAAATTTAT+AGG - chr7_2:83115438-83115457 None:intergenic 15.0%
!! ATGTATATACAAAAGTTTAT+AGG - chr7_2:83115889-83115908 None:intergenic 15.0%
!!! TTTTTCTTTTTTCTTTTTTG+AGG + chr7_2:83116958-83116977 Msa1082940:three_prime_UTR 15.0%
!! TCTTTCTGTAATTGTAATAT+TGG - chr7_2:83112433-83112452 None:intergenic 20.0%
!! ATAAAAACTATAAACTACTC+CGG - chr7_2:83112884-83112903 None:intergenic 20.0%
!!! ATTCTTTTCATTTGATAAGT+AGG + chr7_2:83113053-83113072 Msa1082940:intron 20.0%
!! AGATTAGGAATTATACTATA+TGG + chr7_2:83113519-83113538 Msa1082940:CDS 20.0%
!!! AAACAATGAAGTTTTGATTT+GGG - chr7_2:83114605-83114624 None:intergenic 20.0%
!!! ATAAAATGCAACAATTTTGT+TGG - chr7_2:83115355-83115374 None:intergenic 20.0%
!!! AAAAAAAAAACTTGTTCTGA+TGG + chr7_2:83115541-83115560 Msa1082940:intron 20.0%
!!! CTGTAATTTTTCTTCTTTAT+CGG + chr7_2:83115599-83115618 Msa1082940:intron 20.0%
!! AAAGTCCAAATATGTAATTT+AGG - chr7_2:83115696-83115715 None:intergenic 20.0%
!! TATATACAAAAGTTTATAGG+AGG - chr7_2:83115886-83115905 None:intergenic 20.0%
!! AGAGAAAGAAACTAAAAATA+TGG - chr7_2:83116130-83116149 None:intergenic 20.0%
!! AAACAAACAGAACAAAAATA+TGG - chr7_2:83116165-83116184 None:intergenic 20.0%
!!! CTGAATTTACATTTTAAAAC+AGG + chr7_2:83116418-83116437 Msa1082940:intron 20.0%
!!! AATTTACATTTTAAAACAGG+AGG + chr7_2:83116421-83116440 Msa1082940:intron 20.0%
!!! ATTTACATTTTAAAACAGGA+GGG + chr7_2:83116422-83116441 Msa1082940:intron 20.0%
!!! TTATTTAGAACAAACACATT+TGG - chr7_2:83116556-83116575 None:intergenic 20.0%
!!! TAAATTACTTATTTTTGTGC+AGG + chr7_2:83116573-83116592 Msa1082940:intron 20.0%
! TTCTGTAATTGTAATATTGG+TGG - chr7_2:83112430-83112449 None:intergenic 25.0%
! TCAATGTAAGATAATTAAGC+AGG - chr7_2:83112739-83112758 None:intergenic 25.0%
! TCAAATAAGTCAATTCAAAC+AGG - chr7_2:83112785-83112804 None:intergenic 25.0%
! ATATATTGCAACATATTGCT+TGG + chr7_2:83113216-83113235 Msa1082940:CDS 25.0%
!! ATAATTCCTAATCTTGTTGT+TGG - chr7_2:83113513-83113532 None:intergenic 25.0%
! TTTCCATATACGGATAATTA+GGG - chr7_2:83113926-83113945 None:intergenic 25.0%
!! TTTTCCATATACGGATAATT+AGG - chr7_2:83113927-83113946 None:intergenic 25.0%
!!! GTCGTTTTTAAATGTTTCAT+GGG - chr7_2:83114243-83114262 None:intergenic 25.0%
! TAGCATTTGAATATAAAGAG+CGG - chr7_2:83114267-83114286 None:intergenic 25.0%
! AACAATAGATGAAAGAATCA+AGG + chr7_2:83114550-83114569 Msa1082940:CDS 25.0%
!! AAGGATATTGGTCTAAAATT+TGG + chr7_2:83114569-83114588 Msa1082940:CDS 25.0%
!!! AAGTTTTGATTTGGGTAATT+GGG - chr7_2:83114597-83114616 None:intergenic 25.0%
!!! GAAACAATGAAGTTTTGATT+TGG - chr7_2:83114606-83114625 None:intergenic 25.0%
! CAAAAGATGCATTTAGAAAT+AGG - chr7_2:83114733-83114752 None:intergenic 25.0%
!! CATTTTCTTAGTTGAAGATA+TGG + chr7_2:83114926-83114945 Msa1082940:intron 25.0%
!!! AGAAAAAAGGTTAGTTTTCA+TGG + chr7_2:83115093-83115112 Msa1082940:intron 25.0%
! AGAAATGAAGATGAAAAATG+AGG - chr7_2:83115232-83115251 None:intergenic 25.0%
!!! TCTTCTTTTGTTTTTTCCAA+TGG + chr7_2:83115249-83115268 Msa1082940:intron 25.0%
! ATTATATGCAAAAGAGCAAA+GGG - chr7_2:83115471-83115490 None:intergenic 25.0%
! TATTATATGCAAAAGAGCAA+AGG - chr7_2:83115472-83115491 None:intergenic 25.0%
!!! GAGTATTTTTTTTTCCTCAA+GGG + chr7_2:83115563-83115582 Msa1082940:intron 25.0%
!!! AGTATTTTTTTTTCCTCAAG+GGG + chr7_2:83115564-83115583 Msa1082940:intron 25.0%
! ATCTGTAGACTTTAAATACA+AGG - chr7_2:83115655-83115674 None:intergenic 25.0%
! GATTGCCTAAATTACATATT+TGG + chr7_2:83115688-83115707 Msa1082940:intron 25.0%
! AAGGAAATTGCATGTATATT+GGG - chr7_2:83116191-83116210 None:intergenic 25.0%
! TAAGGAAATTGCATGTATAT+TGG - chr7_2:83116192-83116211 None:intergenic 25.0%
! TGCAATTTCCTTATATGTTA+TGG + chr7_2:83116199-83116218 Msa1082940:intron 25.0%
! ATTTCCTTATATGTTATGGA+TGG + chr7_2:83116203-83116222 Msa1082940:intron 25.0%
! AAATCCATCCATAACATATA+AGG - chr7_2:83116210-83116229 None:intergenic 25.0%
! TATAAAACCTTAAAAGGTCT+TGG + chr7_2:83116775-83116794 Msa1082940:three_prime_UTR 25.0%
! CAAAAGTGAACAAAATGAAT+GGG - chr7_2:83116888-83116907 None:intergenic 25.0%
! TCAAAAGTGAACAAAATGAA+TGG - chr7_2:83116889-83116908 None:intergenic 25.0%
!!! CTTTTGAAAAGCATTCATAA+AGG + chr7_2:83116902-83116921 Msa1082940:three_prime_UTR 25.0%
! ATGTTATCATAGAGCAATAA+AGG + chr7_2:83117003-83117022 Msa1082940:three_prime_UTR 25.0%
TGTAATTGTAATATTGGTGG+AGG - chr7_2:83112427-83112446 None:intergenic 30.0%
TTAGAGGATCATATTCCAAA+TGG + chr7_2:83112673-83112692 Msa1082940:CDS 30.0%
TAAATACTCGTGAAACTGTT+TGG + chr7_2:83112823-83112842 Msa1082940:intron 30.0%
AAATACTCGTGAAACTGTTT+GGG + chr7_2:83112824-83112843 Msa1082940:intron 30.0%
TCATCTATTACAAGAACTAC+TGG - chr7_2:83113423-83113442 None:intergenic 30.0%
! AATGCTGTCTTTTCCATATA+CGG - chr7_2:83113936-83113955 None:intergenic 30.0%
TTGAAATGGATGGAGAATTT+AGG + chr7_2:83113954-83113973 Msa1082940:CDS 30.0%
! TTGGTTGATATATTATGTGC+TGG + chr7_2:83114002-83114021 Msa1082940:CDS 30.0%
TTAAGATAGGAACTCTTACA+GGG - chr7_2:83114034-83114053 None:intergenic 30.0%
! TTTAAGATAGGAACTCTTAC+AGG - chr7_2:83114035-83114054 None:intergenic 30.0%
! TTTGCAAGAGGATTTAAGAT+AGG - chr7_2:83114047-83114066 None:intergenic 30.0%
!! TTGGTTCTTCATGATGATTT+TGG + chr7_2:83114083-83114102 Msa1082940:CDS 30.0%
CTTTGGCGTTAATTTACAAA+GGG + chr7_2:83114112-83114131 Msa1082940:CDS 30.0%
!!! CGTCGTTTTTAAATGTTTCA+TGG - chr7_2:83114244-83114263 None:intergenic 30.0%
TTGAATACTGAATTGCAAAC+TGG - chr7_2:83114364-83114383 None:intergenic 30.0%
GATGAAAGAATCAAGGATAT+TGG + chr7_2:83114557-83114576 Msa1082940:CDS 30.0%
!!! GAAGTTTTGATTTGGGTAAT+TGG - chr7_2:83114598-83114617 None:intergenic 30.0%
AAAACTTCATTGTTTCCCAA+AGG + chr7_2:83114610-83114629 Msa1082940:CDS 30.0%
! TTTTGATCTATCTCTCAGAA+TGG + chr7_2:83114748-83114767 Msa1082940:CDS 30.0%
! ATTGTCCTTTTATGGTTTAG+AGG + chr7_2:83114966-83114985 Msa1082940:intron 30.0%
! TTGTCCTTTTATGGTTTAGA+GGG + chr7_2:83114967-83114986 Msa1082940:intron 30.0%
AATACCCTCTAAACCATAAA+AGG - chr7_2:83114974-83114993 None:intergenic 30.0%
!!! TATGGTTTAGAGGGTATTTT+TGG + chr7_2:83114976-83114995 Msa1082940:intron 30.0%
!!! ATGGTTTAGAGGGTATTTTT+GGG + chr7_2:83114977-83114996 Msa1082940:intron 30.0%
AAAACAACATGAACAATTGC+TGG - chr7_2:83115041-83115060 None:intergenic 30.0%
TGTAACCTGTGATAGAAAAA+AGG + chr7_2:83115080-83115099 Msa1082940:intron 30.0%
!!! ACTAACCTTTTTTCTATCAC+AGG - chr7_2:83115088-83115107 None:intergenic 30.0%
!!! AAGGTTAGTTTTCATGGTAA+TGG + chr7_2:83115099-83115118 Msa1082940:intron 30.0%
! TAATAATGTGCAGTATTGAG+TGG + chr7_2:83115181-83115200 Msa1082940:intron 30.0%
AGATGAAAAATGAGGAAACA+AGG - chr7_2:83115224-83115243 None:intergenic 30.0%
!!! GGAGTATTTTTTTTTCCTCA+AGG + chr7_2:83115562-83115581 Msa1082940:intron 30.0%
ACAATATACTGCAATGCAAA+AGG + chr7_2:83115957-83115976 Msa1082940:intron 30.0%
CACAGTTTCAATCAATATCT+TGG - chr7_2:83116044-83116063 None:intergenic 30.0%
!! ATGTTATGGATGGATTTTCT+AGG + chr7_2:83116213-83116232 Msa1082940:intron 30.0%
!! TGTTATGGATGGATTTTCTA+GGG + chr7_2:83116214-83116233 Msa1082940:intron 30.0%
!!! ATTACTTATTTTTGTGCAGG+AGG + chr7_2:83116576-83116595 Msa1082940:intron 30.0%
ACAAAACATGCAAACAAACT+TGG - chr7_2:83116806-83116825 None:intergenic 30.0%
!! AAGTTTGTTTGCATGTTTTG+TGG + chr7_2:83116805-83116824 Msa1082940:three_prime_UTR 30.0%
TGTCAAAAAACTCTCAGATT+CGG + chr7_2:83116857-83116876 Msa1082940:three_prime_UTR 30.0%
!!! TCTTTTTTGAGGATGTTCAT+CGG + chr7_2:83116969-83116988 Msa1082940:three_prime_UTR 30.0%
!! GTTTTTGTTCTGGGTTTGAT+GGG - chr7_2:83112330-83112349 None:intergenic 35.0%
!! TGTTTTTGTTCTGGGTTTGA+TGG - chr7_2:83112331-83112350 None:intergenic 35.0%
!!! TTGGAGTCTGTTTTTGTTCT+GGG - chr7_2:83112339-83112358 None:intergenic 35.0%
!!! ATTGGAGTCTGTTTTTGTTC+TGG - chr7_2:83112340-83112359 None:intergenic 35.0%
AAAATACTAGTTGAAGGAGG+AGG - chr7_2:83112385-83112404 None:intergenic 35.0%
GCTAAAATACTAGTTGAAGG+AGG - chr7_2:83112388-83112407 None:intergenic 35.0%
GGTGCTAAAATACTAGTTGA+AGG - chr7_2:83112391-83112410 None:intergenic 35.0%
AATATTGGTGGAGGAAATCT+AGG - chr7_2:83112418-83112437 None:intergenic 35.0%
AACTTGTGACTGTAAGTCAA+AGG - chr7_2:83112644-83112663 None:intergenic 35.0%
! ATGAGCTGAGAAAAGTACAA+AGG - chr7_2:83112707-83112726 None:intergenic 35.0%
! TGTACTTTTCTCAGCTCATA+AGG + chr7_2:83112708-83112727 Msa1082940:intron 35.0%
ATCAGCTGTTTAAGCAAACA+GGG + chr7_2:83112979-83112998 Msa1082940:intron 35.0%
GTTTGAACAAAGTCAACCAT+TGG - chr7_2:83113348-83113367 None:intergenic 35.0%
! ATGGTTGACTTTGTTCAAAC+TGG + chr7_2:83113348-83113367 Msa1082940:CDS 35.0%
! TGGTTGACTTTGTTCAAACT+GGG + chr7_2:83113349-83113368 Msa1082940:CDS 35.0%
!! TTCCTAATCTTGTTGTTGGA+GGG - chr7_2:83113509-83113528 None:intergenic 35.0%
!! ATTCCTAATCTTGTTGTTGG+AGG - chr7_2:83113510-83113529 None:intergenic 35.0%
TCTGGTACGTTCAACTTATA+CGG - chr7_2:83113723-83113742 None:intergenic 35.0%
! GTTGCTCTTGCTATAATTCA+GGG + chr7_2:83113780-83113799 Msa1082940:CDS 35.0%
AGTAGAATTATTGTCTGTGC+CGG + chr7_2:83113852-83113871 Msa1082940:CDS 35.0%
TTAGGGTGGTTAAAAGAATG+AGG - chr7_2:83113909-83113928 None:intergenic 35.0%
! TGGAAAAGACAGCATTGAAA+TGG + chr7_2:83113940-83113959 Msa1082940:CDS 35.0%
! AAAGACAGCATTGAAATGGA+TGG + chr7_2:83113944-83113963 Msa1082940:CDS 35.0%
CCTTTGTAAATTAACGCCAA+AGG - chr7_2:83114114-83114133 None:intergenic 35.0%
CCTTTGGCGTTAATTTACAA+AGG + chr7_2:83114111-83114130 Msa1082940:CDS 35.0%
TTGAGTGATGAGAATATCGT+CGG - chr7_2:83114186-83114205 None:intergenic 35.0%
! TATTCTCATCACTCAAGTTG+TGG + chr7_2:83114190-83114209 Msa1082940:CDS 35.0%
! ATTCTCATCACTCAAGTTGT+GGG + chr7_2:83114191-83114210 Msa1082940:CDS 35.0%
!! ATCACTTTTGATGTCTCCTT+TGG - chr7_2:83114330-83114349 None:intergenic 35.0%
TCAGTATTCAAATGTGTACC+AGG + chr7_2:83114373-83114392 Msa1082940:CDS 35.0%
AAATGAAGACATCAGTTCCA+TGG - chr7_2:83114871-83114890 None:intergenic 35.0%
ATGGAACTGATGTCTTCATT+TGG + chr7_2:83114870-83114889 Msa1082940:CDS 35.0%
! TTGCAGTCATTGTCCTTTTA+TGG + chr7_2:83114958-83114977 Msa1082940:intron 35.0%
GTCATTGCGTTATGAAATGT+AGG + chr7_2:83115131-83115150 Msa1082940:intron 35.0%
! ATGCAACAATTTTGTTGGCA+AGG - chr7_2:83115350-83115369 None:intergenic 35.0%
! TGCTGATTGCCATAAATAAC+TGG + chr7_2:83115497-83115516 Msa1082940:intron 35.0%
CCATCAGAACCAGTTATTTA+TGG - chr7_2:83115509-83115528 None:intergenic 35.0%
!! CCATAAATAACTGGTTCTGA+TGG + chr7_2:83115506-83115525 Msa1082940:intron 35.0%
CTTTATCGGATGCTTGAATA+AGG + chr7_2:83115613-83115632 Msa1082940:intron 35.0%
!! CGTTTGTTATGACTGAAACT+GGG - chr7_2:83115731-83115750 None:intergenic 35.0%
!! ACGTTTGTTATGACTGAAAC+TGG - chr7_2:83115732-83115751 None:intergenic 35.0%
TCATCAATTTGATGCCACAT+AGG - chr7_2:83115938-83115957 None:intergenic 35.0%
TTACAACATAGTTTCCCACA+TGG - chr7_2:83116007-83116026 None:intergenic 35.0%
TTGTATTTCTTCAGCTTGTG+TGG + chr7_2:83116080-83116099 Msa1082940:intron 35.0%
!!! AGAAGCACTTTTTCCTTCAT+CGG - chr7_2:83116254-83116273 None:intergenic 35.0%
TCTCCTTCATTATTCATTCC+TGG + chr7_2:83116360-83116379 Msa1082940:intron 35.0%
ACACCAGGAATGAATAATGA+AGG - chr7_2:83116366-83116385 None:intergenic 35.0%
! TTTTACAAGAAGATGACACC+AGG - chr7_2:83116381-83116400 None:intergenic 35.0%
ATGTTAACGTCCTAAGTTGT+GGG - chr7_2:83116609-83116628 None:intergenic 35.0%
TAAAGAGGTAAGGGAAGAAT+GGG - chr7_2:83117065-83117084 None:intergenic 35.0%
GACAATGACTAAAGAGGTAA+GGG - chr7_2:83117074-83117093 None:intergenic 35.0%
AGACAATGACTAAAGAGGTA+AGG - chr7_2:83117075-83117094 None:intergenic 35.0%
AACCCAACACAACCTAATGT+TGG + chr7_2:83112298-83112317 Msa1082940:CDS 40.0%
ACCCAACACAACCTAATGTT+GGG + chr7_2:83112299-83112318 Msa1082940:CDS 40.0%
! ACCCAACATTAGGTTGTGTT+GGG - chr7_2:83112303-83112322 None:intergenic 40.0%
! AACCCAACATTAGGTTGTGT+TGG - chr7_2:83112304-83112323 None:intergenic 40.0%
GATCAAACTTCATCTGCCAA+TGG + chr7_2:83112451-83112470 Msa1082940:CDS 40.0%
ACAGGAGATGTAAATACAGG+AGG - chr7_2:83112511-83112530 None:intergenic 40.0%
AAGGATCCATTTGAGTAACG+TGG - chr7_2:83112625-83112644 None:intergenic 40.0%
GACTTACAGTCACAAGTTTC+TGG + chr7_2:83112646-83112665 Msa1082940:CDS 40.0%
! TTACAGTCACAAGTTTCTGG+TGG + chr7_2:83112649-83112668 Msa1082940:CDS 40.0%
ACAAAGGATGACTCTCCATT+TGG - chr7_2:83112691-83112710 None:intergenic 40.0%
GATCAGCTGTTTAAGCAAAC+AGG + chr7_2:83112978-83112997 Msa1082940:intron 40.0%
ACAAGCAAATGTACCCAGTT+TGG + chr7_2:83113092-83113111 Msa1082940:CDS 40.0%
CAAGCAAATGTACCCAGTTT+GGG + chr7_2:83113093-83113112 Msa1082940:CDS 40.0%
!! AATGTACCCAGTTTGGGTTT+TGG + chr7_2:83113099-83113118 Msa1082940:CDS 40.0%
!! ATGTACCCAGTTTGGGTTTT+GGG + chr7_2:83113100-83113119 Msa1082940:CDS 40.0%
TGCAACATATTGCTTGGATC+AGG + chr7_2:83113222-83113241 Msa1082940:CDS 40.0%
GACATATAACACATTGCCAC+TGG - chr7_2:83113248-83113267 None:intergenic 40.0%
CGAAAACTGAATGCAAGTGA+TGG + chr7_2:83113267-83113286 Msa1082940:CDS 40.0%
TCCAGAACTATCTTCACCAA+TGG + chr7_2:83113329-83113348 Msa1082940:CDS 40.0%
ACCATTGGTGAAGATAGTTC+TGG - chr7_2:83113333-83113352 None:intergenic 40.0%
! TCTGAAACTGGAACAAAACC+AGG - chr7_2:83113384-83113403 None:intergenic 40.0%
!! GACATTCTGGAATCTGAAAC+TGG - chr7_2:83113396-83113415 None:intergenic 40.0%
TAAAAAGTCGTACACCGACA+CGG - chr7_2:83113550-83113569 None:intergenic 40.0%
ACCAAGTGAAGATTCTCTGA+AGG + chr7_2:83113614-83113633 Msa1082940:CDS 40.0%
! TCTCTGAAGGCTTTGCTTTA+TGG + chr7_2:83113627-83113646 Msa1082940:CDS 40.0%
AAGGCTTTGCTTTATGGTAC+AGG + chr7_2:83113633-83113652 Msa1082940:CDS 40.0%
CGGCGTCAATGATGAAAATA+TGG - chr7_2:83113703-83113722 None:intergenic 40.0%
! GGTTGCTCTTGCTATAATTC+AGG + chr7_2:83113779-83113798 Msa1082940:CDS 40.0%
AAAGAATGAGGAACAGATCC+AGG - chr7_2:83113897-83113916 None:intergenic 40.0%
CCATATACGGATAATTAGGG+TGG - chr7_2:83113923-83113942 None:intergenic 40.0%
CCACCCTAATTATCCGTATA+TGG + chr7_2:83113920-83113939 Msa1082940:CDS 40.0%
GGCTCATCGACACAATATAT+TGG + chr7_2:83113983-83114002 Msa1082940:CDS 40.0%
!! AATCCTCTTGCAAAAGCATC+AGG + chr7_2:83114053-83114072 Msa1082940:CDS 40.0%
!!! AAAAGCATCAGGTGGAGTTT+TGG + chr7_2:83114064-83114083 Msa1082940:CDS 40.0%
!! GATGATTTTGGAGAAGCCTT+TGG + chr7_2:83114095-83114114 Msa1082940:CDS 40.0%
GCCTACAGTAGATAGTGTTT+CGG + chr7_2:83114427-83114446 Msa1082940:CDS 40.0%
CCTACAGTAGATAGTGTTTC+GGG + chr7_2:83114428-83114447 Msa1082940:CDS 40.0%
!! GGGATATCTTGAAAGTGTTC+AGG + chr7_2:83114448-83114467 Msa1082940:CDS 40.0%
!! TGAAAGTGTTCAGGATGAAG+TGG + chr7_2:83114457-83114476 Msa1082940:CDS 40.0%
ATTCAGTGGCTGTTGATATG+CGG + chr7_2:83114525-83114544 Msa1082940:CDS 40.0%
GTAAGAGAGAAAGCTCCTTT+GGG - chr7_2:83114628-83114647 None:intergenic 40.0%
AAAGGAGCTTTCTCTCTTAC+CGG + chr7_2:83114628-83114647 Msa1082940:CDS 40.0%
CCAATAATGCATCCCAATAG+TGG - chr7_2:83114680-83114699 None:intergenic 40.0%
CCACTATTGGGATGCATTAT+TGG + chr7_2:83114677-83114696 Msa1082940:CDS 40.0%
TTATTGGCCATGAAGATGAG+AGG + chr7_2:83114693-83114712 Msa1082940:CDS 40.0%
TAGAAATAGGTTCCTCAGCA+CGG - chr7_2:83114720-83114739 None:intergenic 40.0%
TGATCTATCTCTCAGAATGG+TGG + chr7_2:83114751-83114770 Msa1082940:CDS 40.0%
AACTGATGTCTTCATTTGGC+TGG + chr7_2:83114874-83114893 Msa1082940:CDS 40.0%
TCTATCACAGGTTACACAAC+AGG - chr7_2:83115076-83115095 None:intergenic 40.0%
TGTAGGAACAGTAGTTAGTC+TGG + chr7_2:83115148-83115167 Msa1082940:intron 40.0%
GATGATTGTCTGAATCAACG+TGG + chr7_2:83115379-83115398 Msa1082940:intron 40.0%
ATATGCAAAAGAGCAAAGGG+CGG - chr7_2:83115468-83115487 None:intergenic 40.0%
TATCGGATGCTTGAATAAGG+CGG + chr7_2:83115616-83115635 Msa1082940:intron 40.0%
!! GTTTGTTTTCACACTGACCA+CGG + chr7_2:83115766-83115785 Msa1082940:intron 40.0%
!! AAAGCAACAATTTGTTGCCG+TGG - chr7_2:83115786-83115805 None:intergenic 40.0%
!! CGGCAACAAATTGTTGCTTT+CGG + chr7_2:83115786-83115805 Msa1082940:intron 40.0%
!! GGCAACAAATTGTTGCTTTC+GGG + chr7_2:83115787-83115806 Msa1082940:intron 40.0%
CAAAGTTTCTTCTGCCTATG+TGG + chr7_2:83115921-83115940 Msa1082940:intron 40.0%
TATTTCTTCAGCTTGTGTGG+TGG + chr7_2:83116083-83116102 Msa1082940:intron 40.0%
! GGCTCTTGGAACATTTTTGT+TGG + chr7_2:83116104-83116123 Msa1082940:intron 40.0%
!! AGGAAAAAGTGCTTCTGCTT+TGG + chr7_2:83116258-83116277 Msa1082940:CDS 40.0%
GAAAACTGACCTTGAATGCA+AGG - chr7_2:83116342-83116361 None:intergenic 40.0%
TTGTTTACCTGCTCATAAGG+AGG - chr7_2:83116500-83116519 None:intergenic 40.0%
!! GTGTTGTTTACCTGCTCATA+AGG - chr7_2:83116503-83116522 None:intergenic 40.0%
! CATTTGGAGTCTCACATCAA+AGG - chr7_2:83116540-83116559 None:intergenic 40.0%
!!! TTATTTTTGTGCAGGAGGCA+AGG + chr7_2:83116581-83116600 Msa1082940:intron 40.0%
GATGTTAACGTCCTAAGTTG+TGG - chr7_2:83116610-83116629 None:intergenic 40.0%
ACGATCCAAGTTTCTGTGAA+TGG + chr7_2:83116671-83116690 Msa1082940:CDS 40.0%
TGAATGGATGCGAAGTTTGA+AGG + chr7_2:83116687-83116706 Msa1082940:CDS 40.0%
GTCTTCTGCATTAGGTGATT+CGG + chr7_2:83116742-83116761 Msa1082940:three_prime_UTR 40.0%
GTGAACAAAATGAATGGGAG+AGG - chr7_2:83116883-83116902 None:intergenic 40.0%
CTAAAGAGGTAAGGGAAGAA+TGG - chr7_2:83117066-83117085 None:intergenic 40.0%
CCATGAGACAATGACTAAAG+AGG - chr7_2:83117080-83117099 None:intergenic 40.0%
CCTCTTTAGTCATTGTCTCA+TGG + chr7_2:83117077-83117096 Msa1082940:three_prime_UTR 40.0%
AGTCATTGTCTCATGGAAAG+TGG + chr7_2:83117084-83117103 Msa1082940:three_prime_UTR 40.0%
GATGGGATGAACCCAACATT+AGG - chr7_2:83112313-83112332 None:intergenic 45.0%
ATACTAGTTGAAGGAGGAGG+AGG - chr7_2:83112382-83112401 None:intergenic 45.0%
ATTGGTGGAGGAAATCTAGG+TGG - chr7_2:83112415-83112434 None:intergenic 45.0%
TAAATACAGGAGGTCCAGGA+GGG - chr7_2:83112501-83112520 None:intergenic 45.0%
GATGTAAATACAGGAGGTCC+AGG - chr7_2:83112505-83112524 None:intergenic 45.0%
CGGACAGGAGATGTAAATAC+AGG - chr7_2:83112514-83112533 None:intergenic 45.0%
GGGTGAAGTTCGAAAAGGAA+TGG - chr7_2:83112545-83112564 None:intergenic 45.0%
GATCCATTTGAGTAACGTGG+TGG - chr7_2:83112622-83112641 None:intergenic 45.0%
!! ACAAGTTTCTGGTGGCTTAG+AGG + chr7_2:83112657-83112676 Msa1082940:CDS 45.0%
! AAACTGTTTGGGAGAGCACA+TGG + chr7_2:83112835-83112854 Msa1082940:intron 45.0%
TGTTATCACAAGAACCTCGC+CGG + chr7_2:83112862-83112881 Msa1082940:intron 45.0%
AACTATAAACTACTCCGGCG+AGG - chr7_2:83112879-83112898 None:intergenic 45.0%
!! TGTACCCAGTTTGGGTTTTG+GGG + chr7_2:83113101-83113120 Msa1082940:CDS 45.0%
AATGCCCCAAAACCCAAACT+GGG - chr7_2:83113108-83113127 None:intergenic 45.0%
AACTACTGGTGCAGACATTC+TGG - chr7_2:83113409-83113428 None:intergenic 45.0%
! CTCTGAAGATGCTGTAAGTG+AGG - chr7_2:83113459-83113478 None:intergenic 45.0%
CTCCCTCCAACAACAAGATT+AGG + chr7_2:83113504-83113523 Msa1082940:CDS 45.0%
GCCTTCAGAGAATCTTCACT+TGG - chr7_2:83113618-83113637 None:intergenic 45.0%
TACCAGAAGCTTCCAGAGAT+CGG + chr7_2:83113736-83113755 Msa1082940:CDS 45.0%
AGAATTATTGTCTGTGCCGG+TGG + chr7_2:83113855-83113874 Msa1082940:CDS 45.0%
GCTCTCTCTATGGAAACCAA+AGG + chr7_2:83114311-83114330 Msa1082940:CDS 45.0%
CCCGAAACACTATCTACTGT+AGG - chr7_2:83114431-83114450 None:intergenic 45.0%
AACAGCCACTGAATGGTTCT+TGG - chr7_2:83114519-83114538 None:intergenic 45.0%
GCATATCAACAGCCACTGAA+TGG - chr7_2:83114526-83114545 None:intergenic 45.0%
TTCAGTGGCTGTTGATATGC+GGG + chr7_2:83114526-83114545 Msa1082940:CDS 45.0%
GGTAAGAGAGAAAGCTCCTT+TGG - chr7_2:83114629-83114648 None:intergenic 45.0%
! TCCTTTTCCATCTCAGGAGA+GGG + chr7_2:83114654-83114673 Msa1082940:CDS 45.0%
TCCTCGTTGTCTAATGCACA+GGG + chr7_2:83114775-83114794 Msa1082940:CDS 45.0%
TGCATGGCAAGATCATAAGC+CGG - chr7_2:83114824-83114843 None:intergenic 45.0%
AACAGCAGTATCAGACTGCA+TGG - chr7_2:83114840-83114859 None:intergenic 45.0%
ACTGCTGTTGTACTTGACCA+TGG + chr7_2:83114851-83114870 Msa1082940:CDS 45.0%
CAACATGAACAATTGCTGGC+AGG - chr7_2:83115037-83115056 None:intergenic 45.0%
! TGCAGTATTGAGTGGTGCAT+AGG + chr7_2:83115189-83115208 Msa1082940:intron 45.0%
AGGCTGGGTTGTATTTCCAT+TGG - chr7_2:83115268-83115287 None:intergenic 45.0%
! TTTCCTCAAGGGGTATGAGT+TGG + chr7_2:83115574-83115593 Msa1082940:intron 45.0%
! TTCCTCAAGGGGTATGAGTT+GGG + chr7_2:83115575-83115594 Msa1082940:intron 45.0%
TGCAATGGCACTGCAGTATT+TGG - chr7_2:83115983-83116002 None:intergenic 45.0%
TCCTCGTATCCTTGCATTCA+AGG + chr7_2:83116330-83116349 Msa1082940:CDS 45.0%
ACCTTGAATGCAAGGATACG+AGG - chr7_2:83116334-83116353 None:intergenic 45.0%
CGCATCCATTCACAGAAACT+TGG - chr7_2:83116679-83116698 None:intergenic 45.0%
AAGACTACCGGTCATCAACT+CGG - chr7_2:83116727-83116746 None:intergenic 45.0%
CACCTAATGCAGAAGACTAC+CGG - chr7_2:83116739-83116758 None:intergenic 45.0%
! TTCTGCATTAGGTGATTCGG+TGG + chr7_2:83116745-83116764 Msa1082940:three_prime_UTR 45.0%
! GGCTTCACCAAGACCTTTTA+AGG - chr7_2:83116785-83116804 None:intergenic 45.0%
!! TTTATACATTAAAAAAAAAA+AGG - chr7_2:83113030-83113049 None:intergenic 5.0%
GGAGGGGGATGAATTGGAAT+TGG - chr7_2:83112358-83112377 None:intergenic 50.0%
AAATACAGGAGGTCCAGGAG+GGG - chr7_2:83112500-83112519 None:intergenic 50.0%
GTAAATACAGGAGGTCCAGG+AGG - chr7_2:83112502-83112521 None:intergenic 50.0%
GAAAAGGAATGGCAGCTGGA+CGG - chr7_2:83112534-83112553 None:intergenic 50.0%
GTTCGAAAAGGAATGGCAGC+TGG - chr7_2:83112538-83112557 None:intergenic 50.0%
GAAGCGGGTGAAGTTCGAAA+AGG - chr7_2:83112550-83112569 None:intergenic 50.0%
TCGCCACCACGTTACTCAAA+TGG + chr7_2:83112616-83112635 Msa1082940:CDS 50.0%
CAATGCCCCAAAACCCAAAC+TGG - chr7_2:83113109-83113128 None:intergenic 50.0%
!!! CAGTTTGGGTTTTGGGGCAT+TGG + chr7_2:83113107-83113126 Msa1082940:CDS 50.0%
TATTGCTTGGATCAGGCCAG+TGG + chr7_2:83113229-83113248 Msa1082940:CDS 50.0%
TGGAACAAAACCAGGTCGCT+TGG - chr7_2:83113376-83113395 None:intergenic 50.0%
ACTATATGGCCGTACCGTGT+CGG + chr7_2:83113533-83113552 Msa1082940:CDS 50.0%
CATCTGCTGATGTGCTTCCT+GGG + chr7_2:83113583-83113602 Msa1082940:CDS 50.0%
ATCTGCTGATGTGCTTCCTG+GGG + chr7_2:83113584-83113603 Msa1082940:CDS 50.0%
GTCACCAATGCATGCTTCAC+TGG + chr7_2:83113665-83113684 Msa1082940:CDS 50.0%
ACAGCCAGTGAAGCATGCAT+TGG - chr7_2:83113672-83113691 None:intergenic 50.0%
CAACCTCAACAGCAGTTCCT+AGG - chr7_2:83113764-83113783 None:intergenic 50.0%
CTCGAGACAGATCAGCAGAT+GGG - chr7_2:83113806-83113825 None:intergenic 50.0%
CATCTGCTGATCTGTCTCGA+GGG + chr7_2:83113805-83113824 Msa1082940:CDS 50.0%
ATCTGCTGATCTGTCTCGAG+GGG + chr7_2:83113806-83113825 Msa1082940:CDS 50.0%
TGTCTCGAGGGGTTGTCAAA+AGG + chr7_2:83113817-83113836 Msa1082940:CDS 50.0%
GAGGGGTTGTCAAAAGGTCA+GGG + chr7_2:83113823-83113842 Msa1082940:CDS 50.0%
AGGGGTTGTCAAAAGGTCAG+GGG + chr7_2:83113824-83113843 Msa1082940:CDS 50.0%
GATCCAGGCCCATAAGTGTT+CGG - chr7_2:83113882-83113901 None:intergenic 50.0%
GATGGAGAATTTAGGTCGCG+AGG + chr7_2:83113962-83113981 Msa1082940:CDS 50.0%
! CCACCTGATGCTTTTGCAAG+AGG - chr7_2:83114059-83114078 None:intergenic 50.0%
!! CCTCTTGCAAAAGCATCAGG+TGG + chr7_2:83114056-83114075 Msa1082940:CDS 50.0%
! GCGCAGTTCTAACAATCCGT+GGG - chr7_2:83114159-83114178 None:intergenic 50.0%
! TGCGCAGTTCTAACAATCCG+TGG - chr7_2:83114160-83114179 None:intergenic 50.0%
! ATCACTCAAGTTGTGGGTCC+AGG + chr7_2:83114197-83114216 Msa1082940:CDS 50.0%
! TCACTCAAGTTGTGGGTCCA+GGG + chr7_2:83114198-83114217 Msa1082940:CDS 50.0%
TCTACATGAGACTCTTCCCC+TGG - chr7_2:83114218-83114237 None:intergenic 50.0%
ACAGAGCTTCGCTCTCTCTA+TGG + chr7_2:83114301-83114320 Msa1082940:CDS 50.0%
TGTACCAGGCTGATGTCTCA+AGG + chr7_2:83114387-83114406 Msa1082940:CDS 50.0%
GTACCAGGCTGATGTCTCAA+GGG + chr7_2:83114388-83114407 Msa1082940:CDS 50.0%
ACGAGCCAAGAACCATTCAG+TGG + chr7_2:83114511-83114530 Msa1082940:CDS 50.0%
CTGAGATGGAAAAGGAGCTC+CGG - chr7_2:83114650-83114669 None:intergenic 50.0%
! CTCCTTTTCCATCTCAGGAG+AGG + chr7_2:83114653-83114672 Msa1082940:CDS 50.0%
CTCCTCGTTGTCTAATGCAC+AGG + chr7_2:83114774-83114793 Msa1082940:CDS 50.0%
TCCCTGTGCATTAGACAACG+AGG - chr7_2:83114779-83114798 None:intergenic 50.0%
TCGTTGTCTAATGCACAGGG+AGG + chr7_2:83114778-83114797 Msa1082940:CDS 50.0%
CGTTGTCTAATGCACAGGGA+GGG + chr7_2:83114779-83114798 Msa1082940:CDS 50.0%
GTTGTCTAATGCACAGGGAG+GGG + chr7_2:83114780-83114799 Msa1082940:CDS 50.0%
TTGTCTAATGCACAGGGAGG+GGG + chr7_2:83114781-83114800 Msa1082940:CDS 50.0%
!! GGGAACTTTTGAGGAGCTAC+CGG + chr7_2:83114802-83114821 Msa1082940:CDS 50.0%
!!! ACCCAGCCTTTTTTGTCACC+AGG + chr7_2:83115279-83115298 Msa1082940:intron 50.0%
GCCTGGTGACAAAAAAGGCT+GGG - chr7_2:83115283-83115302 None:intergenic 50.0%
! TGCTGGCCTGGTGACAAAAA+AGG - chr7_2:83115288-83115307 None:intergenic 50.0%
AGTTTCCCACATGGCTGCAA+TGG - chr7_2:83115998-83116017 None:intergenic 50.0%
GCTGAACTTGTAGCCGATGA+AGG + chr7_2:83116238-83116257 Msa1082940:CDS 50.0%
TTTGGCTGCATGCAGGACAT+TGG + chr7_2:83116276-83116295 Msa1082940:CDS 50.0%
AGGAGCTGGAAAACGGAACT+CGG - chr7_2:83116314-83116333 None:intergenic 50.0%
GGATACGAGGAGCTGGAAAA+CGG - chr7_2:83116321-83116340 None:intergenic 50.0%
AATGCAAGGATACGAGGAGC+TGG - chr7_2:83116328-83116347 None:intergenic 50.0%
TGTGAGCTGGTATGAGACGT+GGG - chr7_2:83116472-83116491 None:intergenic 50.0%
TTGTGAGCTGGTATGAGACG+TGG - chr7_2:83116473-83116492 None:intergenic 50.0%
ACGTCTCATACCAGCTCACA+AGG + chr7_2:83116472-83116491 Msa1082940:CDS 50.0%
TAAGGAGGATCCTTGTGAGC+TGG - chr7_2:83116485-83116504 None:intergenic 50.0%
CAAGGATCCTCCTTATGAGC+AGG + chr7_2:83116490-83116509 Msa1082940:CDS 50.0%
AGGCAAGGTTCCCACAACTT+AGG + chr7_2:83116596-83116615 Msa1082940:CDS 50.0%
!! ACCTCAACCGAGTTGATGAC+CGG + chr7_2:83116717-83116736 Msa1082940:exon 50.0%
GACCGGTAGTCTTCTGCATT+AGG + chr7_2:83116734-83116753 Msa1082940:three_prime_UTR 50.0%
TTGAAGGAGGAGGAGGAGGA+GGG - chr7_2:83112375-83112394 None:intergenic 55.0%
CTAGTTGAAGGAGGAGGAGG+AGG - chr7_2:83112379-83112398 None:intergenic 55.0%
GGTGGAGGAAATCTAGGTGG+TGG - chr7_2:83112412-83112431 None:intergenic 55.0%
GTGAGGAACTGGACTGCCAT+TGG - chr7_2:83112470-83112489 None:intergenic 55.0%
! GGGGTACTCAAGTGAGGAAC+TGG - chr7_2:83112481-83112500 None:intergenic 55.0%
GGTTGGCAAAGAAGAGGCTG+AGG - chr7_2:83112593-83112612 None:intergenic 55.0%
CGACGAGGTTGGCAAAGAAG+AGG - chr7_2:83112599-83112618 None:intergenic 55.0%
!! TTTGGGGCATTGGTCTCTCC+TGG + chr7_2:83113117-83113136 Msa1082940:CDS 55.0%
!! GGCATTGGTCTCTCCTGGTA+GGG + chr7_2:83113122-83113141 Msa1082940:CDS 55.0%
! ATTGGTCTCTCCTGGTAGGG+AGG + chr7_2:83113125-83113144 Msa1082940:CDS 55.0%
GATCGCGCTGTATTACCTGG+GGG - chr7_2:83113161-83113180 None:intergenic 55.0%
GGATCGCGCTGTATTACCTG+GGG - chr7_2:83113162-83113181 None:intergenic 55.0%
GGGATCGCGCTGTATTACCT+GGG - chr7_2:83113163-83113182 None:intergenic 55.0%
! CCACAGCTTTGACAGCGATG+GGG - chr7_2:83113183-83113202 None:intergenic 55.0%
! CCCACAGCTTTGACAGCGAT+GGG - chr7_2:83113184-83113203 None:intergenic 55.0%
CCCATCGCTGTCAAAGCTGT+GGG + chr7_2:83113181-83113200 Msa1082940:CDS 55.0%
CCATCGCTGTCAAAGCTGTG+GGG + chr7_2:83113182-83113201 Msa1082940:CDS 55.0%
AGTCGTACACCGACACGGTA+CGG - chr7_2:83113545-83113564 None:intergenic 55.0%
GCATCTGCTGATGTGCTTCC+TGG + chr7_2:83113582-83113601 Msa1082940:CDS 55.0%
! TCACTTGGTGACTTGTCCCC+AGG - chr7_2:83113603-83113622 None:intergenic 55.0%
! CACCGATCTCTGGAAGCTTC+TGG - chr7_2:83113741-83113760 None:intergenic 55.0%
!! AGTTCCTAGGCACCGATCTC+TGG - chr7_2:83113751-83113770 None:intergenic 55.0%
GTGCCTAGGAACTGCTGTTG+AGG + chr7_2:83113758-83113777 Msa1082940:CDS 55.0%
CCTCGAGACAGATCAGCAGA+TGG - chr7_2:83113807-83113826 None:intergenic 55.0%
CCATCTGCTGATCTGTCTCG+AGG + chr7_2:83113804-83113823 Msa1082940:CDS 55.0%
CGAGGGGTTGTCAAAAGGTC+AGG + chr7_2:83113822-83113841 Msa1082940:CDS 55.0%
GGGGTTGTCAAAAGGTCAGG+GGG + chr7_2:83113825-83113844 Msa1082940:CDS 55.0%
CCCATAAGTGTTCGGTCCAC+CGG - chr7_2:83113874-83113893 None:intergenic 55.0%
CCGGTGGACCGAACACTTAT+GGG + chr7_2:83113871-83113890 Msa1082940:CDS 55.0%
! CACTCAAGTTGTGGGTCCAG+GGG + chr7_2:83114199-83114218 Msa1082940:CDS 55.0%
! CGGAGCTCCTTTTCCATCTC+AGG + chr7_2:83114648-83114667 Msa1082940:CDS 55.0%
GCCCTCTCCTGAGATGGAAA+AGG - chr7_2:83114658-83114677 None:intergenic 55.0%
ATAGTGGCCCTCTCCTGAGA+TGG - chr7_2:83114664-83114683 None:intergenic 55.0%
TCTCAGGAGAGGGCCACTAT+TGG + chr7_2:83114664-83114683 Msa1082940:CDS 55.0%
CTCAGGAGAGGGCCACTATT+GGG + chr7_2:83114665-83114684 Msa1082940:CDS 55.0%
GCACGGACCTCTCATCTTCA+TGG - chr7_2:83114703-83114722 None:intergenic 55.0%
AAGATGAGAGGTCCGTGCTG+AGG + chr7_2:83114705-83114724 Msa1082940:CDS 55.0%
TGTCTAATGCACAGGGAGGG+GGG + chr7_2:83114782-83114801 Msa1082940:CDS 55.0%
GGCCTGGTGACAAAAAAGGC+TGG - chr7_2:83115284-83115303 None:intergenic 55.0%
AGCTGCAGTTGCTGCTGGAA+CGG - chr7_2:83115315-83115334 None:intergenic 55.0%
GACCCAACTCATACCCCTTG+AGG - chr7_2:83115580-83115599 None:intergenic 55.0%
! CAGTGCCATTGCAGCCATGT+GGG + chr7_2:83115990-83116009 Msa1082940:intron 55.0%
TCAGCTTGTGTGGTGGCTCT+TGG + chr7_2:83116090-83116109 Msa1082940:intron 55.0%
CTTCTGCTTTGGCTGCATGC+AGG + chr7_2:83116269-83116288 Msa1082940:CDS 55.0%
AAAACAGGAGGGTAGCTCGC+AGG + chr7_2:83116433-83116452 Msa1082940:intron 55.0%
GGTCATCAACTCGGTTGAGG+TGG - chr7_2:83116718-83116737 None:intergenic 55.0%
ACCGGTCATCAACTCGGTTG+AGG - chr7_2:83116721-83116740 None:intergenic 55.0%
GGAGGAGGAGGGGGATGAAT+TGG - chr7_2:83112364-83112383 None:intergenic 60.0%
TGAAGGAGGAGGAGGAGGAG+GGG - chr7_2:83112374-83112393 None:intergenic 60.0%
GTTGAAGGAGGAGGAGGAGG+AGG - chr7_2:83112376-83112395 None:intergenic 60.0%
!! CCAGGAGGGGTACTCAAGTG+AGG - chr7_2:83112487-83112506 None:intergenic 60.0%
CCTCACTTGAGTACCCCTCC+TGG + chr7_2:83112484-83112503 Msa1082940:CDS 60.0%
GAAGAGGCTGAGGAACGAGC+CGG - chr7_2:83112583-83112602 None:intergenic 60.0%
! TAACGTGGTGGCGACGAGGT+TGG - chr7_2:83112610-83112629 None:intergenic 60.0%
! TGAGTAACGTGGTGGCGACG+AGG - chr7_2:83112614-83112633 None:intergenic 60.0%
!! GGGCATTGGTCTCTCCTGGT+AGG + chr7_2:83113121-83113140 Msa1082940:CDS 60.0%
CCAGTTGAGACCTCCCTACC+AGG - chr7_2:83113138-83113157 None:intergenic 60.0%
CCTGGTAGGGAGGTCTCAAC+TGG + chr7_2:83113135-83113154 Msa1082940:CDS 60.0%
GGGGATCGCGCTGTATTACC+TGG - chr7_2:83113164-83113183 None:intergenic 60.0%
CCCCATCGCTGTCAAAGCTG+TGG + chr7_2:83113180-83113199 Msa1082940:CDS 60.0%
! CCCCACAGCTTTGACAGCGA+TGG - chr7_2:83113185-83113204 None:intergenic 60.0%
CAAACTGGGACCAAGCGACC+TGG + chr7_2:83113363-83113382 Msa1082940:CDS 60.0%
! GCTTCCAGAGATCGGTGCCT+AGG + chr7_2:83113744-83113763 Msa1082940:CDS 60.0%
GCCGGTGGACCGAACACTTA+TGG + chr7_2:83113870-83113889 Msa1082940:CDS 60.0%
GGACCGAACACTTATGGGCC+TGG + chr7_2:83113876-83113895 Msa1082940:CDS 60.0%
CGACCCTTGAGACATCAGCC+TGG - chr7_2:83114394-83114413 None:intergenic 60.0%
! CAGGGAGGGGGGAACTTTTG+AGG + chr7_2:83114793-83114812 Msa1082940:CDS 60.0%
GTTCCAGCAGCAACTGCAGC+TGG + chr7_2:83115314-83115333 Msa1082940:intron 60.0%
CAACTGCAGCTGGTGGCAGA+TGG + chr7_2:83115324-83115343 Msa1082940:intron 60.0%
! GCAGTGCCATTGCAGCCATG+TGG + chr7_2:83115989-83116008 Msa1082940:intron 60.0%
GAAGGAGGAGGAGGAGGAGG+GGG - chr7_2:83112373-83112392 None:intergenic 65.0%
GGAATGGCAGCTGGACGGAC+AGG - chr7_2:83112529-83112548 None:intergenic 65.0%
! AGGGCGTCTGCCAGATCAGC+AGG + chr7_2:83114131-83114150 Msa1082940:CDS 65.0%
GCCAGATCAGCAGGCTCCCA+CGG + chr7_2:83114140-83114159 Msa1082940:CDS 65.0%
TCCGTGGGAGCCTGCTGATC+TGG - chr7_2:83114144-83114163 None:intergenic 65.0%
CCACCAGCTGCAGTTGCTGC+TGG - chr7_2:83115320-83115339 None:intergenic 65.0%
CCAGCAGCAACTGCAGCTGG+TGG + chr7_2:83115317-83115336 Msa1082940:intron 65.0%
GAGGCTGAGGAACGAGCCGG+CGG - chr7_2:83112580-83112599 None:intergenic 70.0%
GGAGGTCTCAACTGGCCCCC+AGG + chr7_2:83113143-83113162 Msa1082940:CDS 70.0%
TGGAACGGCAGCTGCTGGCC+TGG - chr7_2:83115300-83115319 None:intergenic 70.0%
GCTGCTGGAACGGCAGCTGC+TGG - chr7_2:83115305-83115324 None:intergenic 70.0%
ACCCGCTTCGCCTCAGCCGC+CGG + chr7_2:83112561-83112580 Msa1082940:CDS 75.0%
AGCCGGCGGCTGAGGCGAAG+CGG - chr7_2:83112566-83112585 None:intergenic 75.0%
GAGGAACGAGCCGGCGGCTG+AGG - chr7_2:83112574-83112593 None:intergenic 75.0%
! GCCGGCGGCTGAGGCGAAGC+GGG - chr7_2:83112565-83112584 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 83112289 83117110 83112289 ID=Msa1082940;Name=Msa1082940
chr7_2 mRNA 83112289 83117110 83112289 ID=Msa1082940-mRNA-1;Parent=Msa1082940;Name=Msa1082940-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.8|1|1|1|5|378|855
chr7_2 exon 83112289 83112708 83112289 ID=Msa1082940-mRNA-1:exon:21753;Parent=Msa1082940-mRNA-1
chr7_2 exon 83113075 83114895 83113075 ID=Msa1082940-mRNA-1:exon:21754;Parent=Msa1082940-mRNA-1
chr7_2 exon 83116235 83116351 83116235 ID=Msa1082940-mRNA-1:exon:21755;Parent=Msa1082940-mRNA-1
chr7_2 exon 83116440 83116511 83116440 ID=Msa1082940-mRNA-1:exon:21756;Parent=Msa1082940-mRNA-1
chr7_2 exon 83116595 83117110 83116595 ID=Msa1082940-mRNA-1:exon:21757;Parent=Msa1082940-mRNA-1
chr7_2 CDS 83112289 83112708 83112289 ID=Msa1082940-mRNA-1:cds;Parent=Msa1082940-mRNA-1
chr7_2 CDS 83113075 83114895 83113075 ID=Msa1082940-mRNA-1:cds;Parent=Msa1082940-mRNA-1
chr7_2 CDS 83116235 83116351 83116235 ID=Msa1082940-mRNA-1:cds;Parent=Msa1082940-mRNA-1
chr7_2 CDS 83116440 83116511 83116440 ID=Msa1082940-mRNA-1:cds;Parent=Msa1082940-mRNA-1
chr7_2 CDS 83116595 83116732 83116595 ID=Msa1082940-mRNA-1:cds;Parent=Msa1082940-mRNA-1
chr7_2 three_prime_UTR 83116733 83117110 83116733 ID=Msa1082940-mRNA-1:three_prime_utr;Parent=Msa1082940-mRNA-1
Gene Sequence

>Msa1082940

ATGGCTAATAACCCAACACAACCTAATGTTGGGTTCATCCCATCAAACCCAGAACAAAAACAGACTCCAATTCCAATTCATCCCCCTCCTCCTCCTCCTCCTTCAACTAGTATTTTAGCACCACCACCTAGATTTCCTCCACCAATATTACAATTACAGAAAGATCAAACTTCATCTGCCAATGGCAGTCCAGTTCCTCACTTGAGTACCCCTCCTGGACCTCCTGTATTTACATCTCCTGTCCGTCCAGCTGCCATTCCTTTTCGAACTTCACCCGCTTCGCCTCAGCCGCCGGCTCGTTCCTCAGCCTCTTCTTTGCCAACCTCGTCGCCACCACGTTACTCAAATGGATCCTTTGACTTACAGTCACAAGTTTCTGGTGGCTTAGAGGATCATATTCCAAATGGAGAGTCATCCTTTGTATTGAAGCAGAAGAAACAAGCAAATGTACCCAGTTTGGGTTTTGGGGCATTGGTCTCTCCTGGTAGGGAGGTCTCAACTGGCCCCCAGGTAATACAGCGCGATCCCCATCGCTGTCAAAGCTGTGGGGCATATGCAAATATATATTGCAACATATTGCTTGGATCAGGCCAGTGGCAATGTGTTATATGTCGAAAACTGAATGCAAGTGATGGTGAGTACATTGCACATAGCAAAGAAGATCTTCACAGATTTCCAGAACTATCTTCACCAATGGTTGACTTTGTTCAAACTGGGACCAAGCGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCACCAGTAGTTCTTGTAATAGATGAATGTCTAGATGAACCTCACTTACAGCATCTTCAGAGCTCTTTGCATGCATTTGTTGATTCTCTCCCTCCAACAACAAGATTAGGAATTATACTATATGGCCGTACCGTGTCGGTGTACGACTTTTTAGAAGAATCAGTTGCATCTGCTGATGTGCTTCCTGGGGACAAGTCACCAAGTGAAGATTCTCTGAAGGCTTTGCTTTATGGTACAGGTATATATTTGTCACCAATGCATGCTTCACTGGCTGTAGCGCATTCCATATTTTCATCATTGACGCCGTATAAGTTGAACGTACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATCTGTCTCGAGGGGTTGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTATGGGCCTGGATCTGTTCCTCATTCTTTTAACCACCCTAATTATCCGTATATGGAAAAGACAGCATTGAAATGGATGGAGAATTTAGGTCGCGAGGCTCATCGACACAATATATTGGTTGATATATTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTAAATCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGAGAAGCCTTTGGCGTTAATTTACAAAGGGCGTCTGCCAGATCAGCAGGCTCCCACGGATTGTTAGAACTGCGCACATCCGACGATATTCTCATCACTCAAGTTGTGGGTCCAGGGGAAGAGTCTCATGTAGACACCCATGAAACATTTAAAAACGACGCCGCTCTTTATATTCAAATGCTAAGTGTTGAAGAGACACAGAGCTTCGCTCTCTCTATGGAAACCAAAGGAGACATCAAAAGTGATTTTGTCTTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTACCAGGCTGATGTCTCAAGGGTCGTTACTGTTAGATTGCCTACAGTAGATAGTGTTTCGGGATATCTTGAAAGTGTTCAGGATGAAGTGGCTGCTGTGCTCATTGCAAAGAGAACTCTGTTACGAGCCAAGAACCATTCAGTGGCTGTTGATATGCGGGTAACAATAGATGAAAGAATCAAGGATATTGGTCTAAAATTTGGCTCCCAATTACCCAAATCAAAACTTCATTGTTTCCCAAAGGAGCTTTCTCTCTTACCGGAGCTCCTTTTCCATCTCAGGAGAGGGCCACTATTGGGATGCATTATTGGCCATGAAGATGAGAGGTCCGTGCTGAGGAACCTATTTCTAAATGCATCTTTTGATCTATCTCTCAGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTTGCCATGCAGTCTGATACTGCTGTTGTACTTGACCATGGAACTGATGTCTTCATTTGGCTGGGTGCTGAACTTGTAGCCGATGAAGGAAAAAGTGCTTCTGCTTTGGCTGCATGCAGGACATTGGCTGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTCAAGGAGGGTAGCTCGCAGGCTCGATATTTTGTCCCACGTCTCATACCAGCTCACAAGGATCCTCCTTATGAGCAGGAGGCAAGGTTCCCACAACTTAGGACGTTAACATCAGAACAGAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTCGACGATCCAAGTTTCTGTGAATGGATGCGAAGTTTGAAGGTCGTACCACCTCAACCGAGTTGA
Protein sequence

>Msa1082940

MANNPTQPNVGFIPSNPEQKQTPIPIHPPPPPPPSTSILAPPPRFPPPILQLQKDQTSSANGSPVPHLSTPPGPPVFTSPVRPAAIPFRTSPASPQPPARSSASSLPTSSPPRYSNGSFDLQSQVSGGLEDHIPNGESSFVLKQKKQANVPSLGFGALVSPGREVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNASDGEYIAHSKEDLHRFPELSSPMVDFVQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFLEESVASADVLPGDKSPSEDSLKALLYGTGIYLSPMHASLAVAHSIFSSLTPYKLNVPEASRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRHNILVDILCAGTCPVRVPILNPLAKASGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDAALYIQMLSVEETQSFALSMETKGDIKSDFVFFQFAIQYSNVYQADVSRVVTVRLPTVDSVSGYLESVQDEVAAVLIAKRTLLRAKNHSVAVDMRVTIDERIKDIGLKFGSQLPKSKLHCFPKELSLLPELLFHLRRGPLLGCIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDVFIWLGAELVADEGKSASALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVPRLIPAHKDPPYEQEARFPQLRTLTSEQRTKLKSSFVHFDDPSFCEWMRSLKVVPPQPS*