AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127550 MtrunA17_Chr7g0270801 98.374 861 7 1 1 854 1 861 0.0 1726
Msa1127550 MtrunA17_Chr3g0122081 23.088 706 437 21 175 801 56 734 6.46e-32 133
Msa1127550 MtrunA17_Chr8g0338351 21.662 734 470 22 155 814 36 738 1.45e-30 129
Msa1127550 MtrunA17_Chr1g0206271 21.637 684 449 18 178 801 55 711 1.12e-18 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127550 AT4G01810.3 76.559 866 165 9 16 853 24 879 0.0 1328
Msa1127550 AT4G01810.1 76.559 866 165 9 16 853 24 879 0.0 1328
Msa1127550 AT4G01810.2 76.559 866 165 9 16 853 24 879 0.0 1328
Msa1127550 AT2G21630.1 21.909 744 483 20 140 811 22 739 5.71e-28 121
Msa1127550 AT3G23660.1 22.897 725 470 21 144 801 26 728 1.16e-27 120
Msa1127550 AT4G14160.2 22.461 699 445 21 175 801 62 735 1.42e-27 120
Msa1127550 AT4G14160.1 22.857 700 442 22 175 801 62 736 2.95e-27 119
Msa1127550 AT3G23660.2 22.667 750 467 23 144 801 26 754 1.26e-25 114
Msa1127550 AT5G43670.1 22.452 726 453 21 171 801 49 759 2.16e-22 103
Msa1127550 AT4G14160.3 22.662 556 351 17 175 672 62 596 2.99e-20 96.3

Find 262 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTGAAGGCTTTGCTTTA+TGG 0.139676 7_3:-79187454 Msa1127550:CDS
TTAATTTATAAAACCTTAAA+AGG 0.163203 7_3:-79184312 Msa1127550:three_prime_UTR
AAGGATATTGGTCTAAAATT+TGG 0.164264 7_3:-79186512 Msa1127550:CDS
GACTTACAGTCACAAGTTTC+TGG 0.167719 7_3:-79188436 Msa1127550:CDS
CCACTATTGGGATGCATTAT+TGG 0.182224 7_3:-79186404 Msa1127550:CDS
GCATCTGCTGATGTGCTTCC+TGG 0.200862 7_3:-79187499 Msa1127550:CDS
CAAAAGATGCATTTAGAAAT+AGG 0.208765 7_3:+79186351 None:intergenic
GGTTGCTCTTGCTATAATTC+AGG 0.239657 7_3:-79187302 Msa1127550:CDS
TTTAAGATAGGAACTCTTAC+AGG 0.250263 7_3:+79187049 None:intergenic
GCCGGTGGACCGAACACTTA+TGG 0.263379 7_3:-79187211 Msa1127550:CDS
TTGAAATGGATGGAGAATTT+AGG 0.277803 7_3:-79187127 Msa1127550:CDS
ATGGTTGACTTTGTTCAAAC+TGG 0.284715 7_3:-79187733 Msa1127550:CDS
TCTTTCTGTAATTGTAATAT+TGG 0.289656 7_3:+79188652 None:intergenic
CGGCGTCAATGATGAAAATA+TGG 0.290989 7_3:+79187381 None:intergenic
CCTACAGTAGATAGTGTTTC+GGG 0.298307 7_3:-79186653 Msa1127550:CDS
AACTACTGGTGCAGACATTC+TGG 0.301882 7_3:+79187675 None:intergenic
CCACCCTAATTATCCGTATA+TGG 0.302828 7_3:-79187161 Msa1127550:CDS
CAATGCCCCAAAACCCAAAC+TGG 0.316290 7_3:+79187975 None:intergenic
TTGGTTCTTCATGATGATTT+TGG 0.319030 7_3:-79186998 Msa1127550:CDS
ACAAGCAAATGTACCCAGTT+TGG 0.324194 7_3:-79187989 Msa1127550:CDS
TTTCCATATACGGATAATTA+GGG 0.335818 7_3:+79187158 None:intergenic
CATCTGCTGATGTGCTTCCT+GGG 0.336370 7_3:-79187498 Msa1127550:CDS
TCTGGTACGTTCAACTTATA+CGG 0.339293 7_3:+79187361 None:intergenic
AAAAGCATCAGGTGGAGTTT+TGG 0.348973 7_3:-79187017 Msa1127550:CDS
ACAGAGCTTCGCTCTCTCTA+TGG 0.349880 7_3:-79186780 Msa1127550:CDS
GGGGATCGCGCTGTATTACC+TGG 0.351569 7_3:+79187920 None:intergenic
AATGTACCCAGTTTGGGTTT+TGG 0.352094 7_3:-79187982 Msa1127550:CDS
GCCTACAGTAGATAGTGTTT+CGG 0.357522 7_3:-79186654 Msa1127550:CDS
AAAGGAGCTTTCTCTCTTAC+CGG 0.359772 7_3:-79186453 Msa1127550:CDS
CAAGCAAATGTACCCAGTTT+GGG 0.360268 7_3:-79187988 Msa1127550:CDS
TCTCAGGAGAGGGCCACTAT+TGG 0.360541 7_3:-79186417 Msa1127550:CDS
CTAGTTGAAGGAGGAGGAGG+AGG 0.361462 7_3:+79188706 None:intergenic
GGGATATCTTGAAAGTGTTC+AGG 0.362371 7_3:-79186633 Msa1127550:CDS
ACAAGTTTCTGGTGGCTTAG+AGG 0.363880 7_3:-79188425 Msa1127550:CDS
TATAAAACCTTAAAAGGTCT+TGG 0.372507 7_3:-79184306 Msa1127550:three_prime_UTR
CACCGATCTCTGGAAGCTTC+TGG 0.373407 7_3:+79187343 None:intergenic
AACAGCCACTGAATGGTTCT+TGG 0.376140 7_3:+79186565 None:intergenic
TCCGTGGGAGCCTGCTGATC+TGG 0.377406 7_3:+79186940 None:intergenic
ATGTTATCATAGAGCAATAA+AGG 0.382055 7_3:-79184070 Msa1127550:three_prime_UTR
CGCATCCATTCACAGAAACT+TGG 0.382554 7_3:+79184405 None:intergenic
GATGGGATGAACCCAACATT+AGG 0.384059 7_3:+79188769 None:intergenic
ATAATTCCTAATCTTGTTGT+TGG 0.386425 7_3:+79187571 None:intergenic
GTCACCAATGCATGCTTCAC+TGG 0.387009 7_3:-79187416 Msa1127550:CDS
TTGAATACTGAATTGCAAAC+TGG 0.388045 7_3:+79186720 None:intergenic
ATCACTCAAGTTGTGGGTCC+AGG 0.390955 7_3:-79186884 Msa1127550:CDS
AGTTCCTAGGCACCGATCTC+TGG 0.396441 7_3:+79187333 None:intergenic
GGTAAGAGAGAAAGCTCCTT+TGG 0.396517 7_3:+79186455 None:intergenic
GACATTCTGGAATCTGAAAC+TGG 0.397143 7_3:+79187688 None:intergenic
AGATTAGGAATTATACTATA+TGG 0.397844 7_3:-79187562 Msa1127550:CDS
TCCTCGTATCCTTGCATTCA+AGG 0.399565 7_3:-79184751 Msa1127550:intron
GATGAAAGAATCAAGGATAT+TGG 0.400096 7_3:-79186524 Msa1127550:CDS
CCGGTGGACCGAACACTTAT+GGG 0.402191 7_3:-79187210 Msa1127550:CDS
TTTGCAAGAGGATTTAAGAT+AGG 0.402810 7_3:+79187037 None:intergenic
ACCATTGGTGAAGATAGTTC+TGG 0.403758 7_3:+79187751 None:intergenic
GGGCATTGGTCTCTCCTGGT+AGG 0.404383 7_3:-79187960 Msa1127550:CDS
ATGGAACTGATGTCTTCATT+TGG 0.415608 7_3:-79186211 Msa1127550:CDS
TTTGGGGCATTGGTCTCTCC+TGG 0.416619 7_3:-79187964 Msa1127550:CDS
ACAAAGGATGACTCTCCATT+TGG 0.416965 7_3:+79188394 None:intergenic
CGAGGGGTTGTCAAAAGGTC+AGG 0.419375 7_3:-79187259 Msa1127550:CDS
TCAAAAGTGAACAAAATGAA+TGG 0.421037 7_3:+79184194 None:intergenic
GCACGGACCTCTCATCTTCA+TGG 0.423564 7_3:+79186381 None:intergenic
CTCCCTCCAACAACAAGATT+AGG 0.425059 7_3:-79187577 Msa1127550:CDS
GTGTTGTTTACCTGCTCATA+AGG 0.426814 7_3:+79184581 None:intergenic
AAGGCTTTGCTTTATGGTAC+AGG 0.428062 7_3:-79187448 Msa1127550:CDS
GTCTTCTGCATTAGGTGATT+CGG 0.428515 7_3:-79184339 Msa1127550:three_prime_UTR
TGGAAAAGACAGCATTGAAA+TGG 0.428902 7_3:-79187141 Msa1127550:CDS
TTCTGTAATTGTAATATTGG+TGG 0.430203 7_3:+79188655 None:intergenic
ACGATCCAAGTTTCTGTGAA+TGG 0.430684 7_3:-79184410 Msa1127550:CDS
GGCTCATCGACACAATATAT+TGG 0.432834 7_3:-79187098 Msa1127550:CDS
TGCAACATATTGCTTGGATC+AGG 0.433218 7_3:-79187859 Msa1127550:CDS
AGTTGAAGGAGGAGGAGGAG+GGG 0.435958 7_3:+79188708 None:intergenic
GGGGTACTCAAGTGAGGAAC+TGG 0.436654 7_3:+79188604 None:intergenic
GACCGGTAGTCTTCTGCATT+AGG 0.439897 7_3:-79184347 Msa1127550:three_prime_UTR
GAGGAACGAGCCGGCGGCTG+AGG 0.441389 7_3:+79188511 None:intergenic
TAGTTGAAGGAGGAGGAGGA+GGG 0.442572 7_3:+79188707 None:intergenic
GGAATGGCAGCTGGACGGAC+AGG 0.443534 7_3:+79188556 None:intergenic
CTCCTCGTTGTCTAATGCAC+AGG 0.443595 7_3:-79186307 Msa1127550:CDS
CCTCTTTAGTCATTGTCTCA+TGG 0.445505 7_3:-79183996 Msa1127550:three_prime_UTR
AATATTGGTGGAGGAAATCT+AGG 0.445589 7_3:+79188667 None:intergenic
CCAATAATGCATCCCAATAG+TGG 0.447762 7_3:+79186404 None:intergenic
GTTGCTCTTGCTATAATTCA+GGG 0.450113 7_3:-79187301 Msa1127550:CDS
CAAAAGTGAACAAAATGAAT+GGG 0.450629 7_3:+79184195 None:intergenic
TTGTCTAATGCACAGGGAGG+GGG 0.451959 7_3:-79186300 Msa1127550:CDS
ACAAAACATGCAAACAAACT+TGG 0.453073 7_3:+79184278 None:intergenic
TCGCCACCACGTTACTCAAA+TGG 0.453714 7_3:-79188466 Msa1127550:CDS
AGGGCGTCTGCCAGATCAGC+AGG 0.454933 7_3:-79186950 Msa1127550:CDS
CCCATAAGTGTTCGGTCCAC+CGG 0.456496 7_3:+79187210 None:intergenic
ACCCAACATTAGGTTGTGTT+GGG 0.461867 7_3:+79188779 None:intergenic
GTAAGAGAGAAAGCTCCTTT+GGG 0.462126 7_3:+79186456 None:intergenic
ACCCAACACAACCTAATGTT+GGG 0.462638 7_3:-79188780 Msa1127550:CDS
TCACTTGGTGACTTGTCCCC+AGG 0.464133 7_3:+79187481 None:intergenic
ATATATTGCAACATATTGCT+TGG 0.465612 7_3:-79187865 Msa1127550:CDS
CTAAAGAGGTAAGGGAAGAA+TGG 0.469518 7_3:+79184010 None:intergenic
AATCCTCTTGCAAAAGCATC+AGG 0.471518 7_3:-79187028 Msa1127550:CDS
GCCGGCGGCTGAGGCGAAGC+GGG 0.473144 7_3:+79188520 None:intergenic
AACTGATGTCTTCATTTGGC+TGG 0.475952 7_3:-79186207 Msa1127550:intron
GGCATTGGTCTCTCCTGGTA+GGG 0.478728 7_3:-79187959 Msa1127550:CDS
TAAAGAGGTAAGGGAAGAAT+GGG 0.480887 7_3:+79184011 None:intergenic
GGACCGAACACTTATGGGCC+TGG 0.482136 7_3:-79187205 Msa1127550:CDS
TGTAATTGTAATATTGGTGG+AGG 0.482734 7_3:+79188658 None:intergenic
TTTGGCTGCATGCAGGACAT+TGG 0.483530 7_3:-79184805 Msa1127550:CDS
AACCCAACATTAGGTTGTGT+TGG 0.484804 7_3:+79188778 None:intergenic
ATACTAGTTGAAGGAGGAGG+AGG 0.484811 7_3:+79188703 None:intergenic
CCTCACTTGAGTACCCCTCC+TGG 0.485475 7_3:-79188598 Msa1127550:CDS
AACCCAACACAACCTAATGT+TGG 0.487252 7_3:-79188781 Msa1127550:CDS
CTTCTGCTTTGGCTGCATGC+AGG 0.488388 7_3:-79184812 Msa1127550:CDS
CGTTGTCTAATGCACAGGGA+GGG 0.490233 7_3:-79186302 Msa1127550:CDS
CCCCATCGCTGTCAAAGCTG+TGG 0.491378 7_3:-79187901 Msa1127550:CDS
ATGTTAACGTCCTAAGTTGT+GGG 0.494007 7_3:+79184475 None:intergenic
AGACAATGACTAAAGAGGTA+AGG 0.494583 7_3:+79184001 None:intergenic
TCTACATGAGACTCTTCCCC+TGG 0.495012 7_3:+79186866 None:intergenic
ATTCCTAATCTTGTTGTTGG+AGG 0.495311 7_3:+79187574 None:intergenic
TTCAGTGGCTGTTGATATGC+GGG 0.499486 7_3:-79186555 Msa1127550:CDS
CAACCTCAACAGCAGTTCCT+AGG 0.500091 7_3:+79187320 None:intergenic
GATGTAAATACAGGAGGTCC+AGG 0.503739 7_3:+79188580 None:intergenic
CCATGAGACAATGACTAAAG+AGG 0.505187 7_3:+79183996 None:intergenic
TTCCTAATCTTGTTGTTGGA+GGG 0.508270 7_3:+79187575 None:intergenic
GGTGCTAAAATACTAGTTGA+AGG 0.508863 7_3:+79188694 None:intergenic
TCATCTATTACAAGAACTAC+TGG 0.509134 7_3:+79187661 None:intergenic
TGGAACAAAACCAGGTCGCT+TGG 0.509710 7_3:+79187708 None:intergenic
GCCCTCTCCTGAGATGGAAA+AGG 0.510725 7_3:+79186426 None:intergenic
CCAGTTGAGACCTCCCTACC+AGG 0.512854 7_3:+79187946 None:intergenic
GTTGTCTAATGCACAGGGAG+GGG 0.514617 7_3:-79186301 Msa1127550:CDS
CCCATCGCTGTCAAAGCTGT+GGG 0.516182 7_3:-79187900 Msa1127550:CDS
AGTCATTGTCTCATGGAAAG+TGG 0.517302 7_3:-79183989 Msa1127550:three_prime_UTR
AAAGAATGAGGAACAGATCC+AGG 0.517901 7_3:+79187187 None:intergenic
AACAATAGATGAAAGAATCA+AGG 0.519486 7_3:-79186531 Msa1127550:CDS
TGTCTCGAGGGGTTGTCAAA+AGG 0.519625 7_3:-79187264 Msa1127550:CDS
CCCCACAGCTTTGACAGCGA+TGG 0.520772 7_3:+79187899 None:intergenic
ATTGGTCTCTCCTGGTAGGG+AGG 0.521739 7_3:-79187956 Msa1127550:CDS
CCCACAGCTTTGACAGCGAT+GGG 0.523958 7_3:+79187900 None:intergenic
CAAGGATCCTCCTTATGAGC+AGG 0.524003 7_3:-79184591 Msa1127550:intron
TCACTCAAGTTGTGGGTCCA+GGG 0.527829 7_3:-79186883 Msa1127550:CDS
TCCAGAACTATCTTCACCAA+TGG 0.527850 7_3:-79187752 Msa1127550:CDS
GCCTTCAGAGAATCTTCACT+TGG 0.528830 7_3:+79187466 None:intergenic
TATTCTCATCACTCAAGTTG+TGG 0.529391 7_3:-79186891 Msa1127550:CDS
TTGGTTGATATATTATGTGC+TGG 0.530155 7_3:-79187079 Msa1127550:CDS
TTAGAGGATCATATTCCAAA+TGG 0.531231 7_3:-79188409 Msa1127550:CDS
GCCAGATCAGCAGGCTCCCA+CGG 0.532333 7_3:-79186941 Msa1127550:CDS
GACATATAACACATTGCCAC+TGG 0.532814 7_3:+79187836 None:intergenic
GCTGAACTTGTAGCCGATGA+AGG 0.532973 7_3:-79184843 Msa1127550:CDS
ACCGGTCATCAACTCGGTTG+AGG 0.534312 7_3:+79184363 None:intergenic
CGGACAGGAGATGTAAATAC+AGG 0.535127 7_3:+79188571 None:intergenic
ATTCTCATCACTCAAGTTGT+GGG 0.536006 7_3:-79186890 Msa1127550:CDS
GTGAGGAACTGGACTGCCAT+TGG 0.536352 7_3:+79188615 None:intergenic
CATCTGCTGATCTGTCTCGA+GGG 0.536757 7_3:-79187276 Msa1127550:CDS
GTTCGAAAAGGAATGGCAGC+TGG 0.537523 7_3:+79188547 None:intergenic
CTTTGGCGTTAATTTACAAA+GGG 0.539608 7_3:-79186969 Msa1127550:CDS
TGGTTGACTTTGTTCAAACT+GGG 0.540753 7_3:-79187732 Msa1127550:CDS
GATCCAGGCCCATAAGTGTT+CGG 0.541419 7_3:+79187202 None:intergenic
AGGCAAGGTTCCCACAACTT+AGG 0.541674 7_3:-79184485 Msa1127550:CDS
CACCTAATGCAGAAGACTAC+CGG 0.544525 7_3:+79184345 None:intergenic
CCATCTGCTGATCTGTCTCG+AGG 0.546084 7_3:-79187277 Msa1127550:CDS
GGGATCGCGCTGTATTACCT+GGG 0.546622 7_3:+79187921 None:intergenic
AAAGACAGCATTGAAATGGA+TGG 0.546652 7_3:-79187137 Msa1127550:CDS
TGTACCAGGCTGATGTCTCA+AGG 0.547620 7_3:-79186694 Msa1127550:CDS
GGATACGAGGAGCTGGAAAA+CGG 0.547993 7_3:+79184763 None:intergenic
AAAACAGGAGGGTAGCTCGC+AGG 0.549688 7_3:-79184648 Msa1127550:intron
GAAAACTGACCTTGAATGCA+AGG 0.551532 7_3:+79184742 None:intergenic
CTGAGATGGAAAAGGAGCTC+CGG 0.552188 7_3:+79186434 None:intergenic
AGTCGTACACCGACACGGTA+CGG 0.552372 7_3:+79187539 None:intergenic
TACCAGAAGCTTCCAGAGAT+CGG 0.552628 7_3:-79187345 Msa1127550:CDS
TGATCTATCTCTCAGAATGG+TGG 0.553190 7_3:-79186330 Msa1127550:CDS
GCATATCAACAGCCACTGAA+TGG 0.553857 7_3:+79186558 None:intergenic
AGTAGAATTATTGTCTGTGC+CGG 0.554452 7_3:-79187229 Msa1127550:CDS
AAAACTTCATTGTTTCCCAA+AGG 0.556109 7_3:-79186471 Msa1127550:CDS
GCTTCCAGAGATCGGTGCCT+AGG 0.556110 7_3:-79187337 Msa1127550:CDS
ATAGTGGCCCTCTCCTGAGA+TGG 0.556546 7_3:+79186420 None:intergenic
GAAGAGGCTGAGGAACGAGC+CGG 0.557105 7_3:+79188502 None:intergenic
AATGCAAGGATACGAGGAGC+TGG 0.557311 7_3:+79184756 None:intergenic
GATGTTAACGTCCTAAGTTG+TGG 0.558972 7_3:+79184474 None:intergenic
TAGAAATAGGTTCCTCAGCA+CGG 0.559759 7_3:+79186364 None:intergenic
CACTCAAGTTGTGGGTCCAG+GGG 0.560885 7_3:-79186882 Msa1127550:CDS
ACCTCAACCGAGTTGATGAC+CGG 0.561827 7_3:-79184364 Msa1127550:exon
ACTATATGGCCGTACCGTGT+CGG 0.562058 7_3:-79187548 Msa1127550:CDS
GACAATGACTAAAGAGGTAA+GGG 0.563003 7_3:+79184002 None:intergenic
CCTTTGTAAATTAACGCCAA+AGG 0.566259 7_3:+79186970 None:intergenic
AGAATTATTGTCTGTGCCGG+TGG 0.566565 7_3:-79187226 Msa1127550:CDS
GTTTGAACAAAGTCAACCAT+TGG 0.567196 7_3:+79187736 None:intergenic
TAAGGAGGATCCTTGTGAGC+TGG 0.568588 7_3:+79184599 None:intergenic
TGAATGGATGCGAAGTTTGA+AGG 0.569935 7_3:-79184394 Msa1127550:CDS
TGTCTAATGCACAGGGAGGG+GGG 0.572598 7_3:-79186299 Msa1127550:CDS
CTCGAGACAGATCAGCAGAT+GGG 0.572727 7_3:+79187278 None:intergenic
TCAGTATTCAAATGTGTACC+AGG 0.573423 7_3:-79186708 Msa1127550:CDS
TGCGCAGTTCTAACAATCCG+TGG 0.573517 7_3:+79186924 None:intergenic
ACCTTGAATGCAAGGATACG+AGG 0.575322 7_3:+79184750 None:intergenic
TTCTGCATTAGGTGATTCGG+TGG 0.575553 7_3:-79184336 Msa1127550:three_prime_UTR
AGCCGGCGGCTGAGGCGAAG+CGG 0.575683 7_3:+79188519 None:intergenic
AAAATACTAGTTGAAGGAGG+AGG 0.575861 7_3:+79188700 None:intergenic
GTGAACAAAATGAATGGGAG+AGG 0.576503 7_3:+79184200 None:intergenic
CCTTTGGCGTTAATTTACAA+AGG 0.578294 7_3:-79186970 Msa1127550:CDS
TAACGTGGTGGCGACGAGGT+TGG 0.579731 7_3:+79188475 None:intergenic
TTAGGGTGGTTAAAAGAATG+AGG 0.583364 7_3:+79187175 None:intergenic
CAAACTGGGACCAAGCGACC+TGG 0.585466 7_3:-79187718 Msa1127550:CDS
AGGAGCTGGAAAACGGAACT+CGG 0.585658 7_3:+79184770 None:intergenic
AAATGAAGACATCAGTTCCA+TGG 0.585675 7_3:+79186213 None:intergenic
GTGCCTAGGAACTGCTGTTG+AGG 0.588652 7_3:-79187323 Msa1127550:CDS
CCATATACGGATAATTAGGG+TGG 0.590910 7_3:+79187161 None:intergenic
ACGTCTCATACCAGCTCACA+AGG 0.591329 7_3:-79184609 Msa1127550:CDS
CGACGAGGTTGGCAAAGAAG+AGG 0.593237 7_3:+79188486 None:intergenic
ACAGCCAGTGAAGCATGCAT+TGG 0.593600 7_3:+79187412 None:intergenic
ACCAAGTGAAGATTCTCTGA+AGG 0.595515 7_3:-79187467 Msa1127550:CDS
AACTTGTGACTGTAAGTCAA+AGG 0.596093 7_3:+79188441 None:intergenic
GAGGGGTTGTCAAAAGGTCA+GGG 0.596155 7_3:-79187258 Msa1127550:CDS
AACAGCAGTATCAGACTGCA+TGG 0.601478 7_3:+79186244 None:intergenic
CTCTGAAGATGCTGTAAGTG+AGG 0.601963 7_3:+79187625 None:intergenic
GAAGCGGGTGAAGTTCGAAA+AGG 0.603900 7_3:+79188535 None:intergenic
TTGTTTACCTGCTCATAAGG+AGG 0.608131 7_3:+79184584 None:intergenic
ATCTGCTGATGTGCTTCCTG+GGG 0.608232 7_3:-79187497 Msa1127550:CDS
ATTCAGTGGCTGTTGATATG+CGG 0.608901 7_3:-79186556 Msa1127550:CDS
TTGAGTGATGAGAATATCGT+CGG 0.609074 7_3:+79186898 None:intergenic
CCTCGAGACAGATCAGCAGA+TGG 0.609962 7_3:+79187277 None:intergenic
GGGTGAAGTTCGAAAAGGAA+TGG 0.611406 7_3:+79188540 None:intergenic
GGTTGGCAAAGAAGAGGCTG+AGG 0.612080 7_3:+79188492 None:intergenic
GGATCGCGCTGTATTACCTG+GGG 0.612217 7_3:+79187922 None:intergenic
TCCTCGTTGTCTAATGCACA+GGG 0.614480 7_3:-79186306 Msa1127550:CDS
ATCTGCTGATCTGTCTCGAG+GGG 0.616232 7_3:-79187275 Msa1127550:CDS
AAGACTACCGGTCATCAACT+CGG 0.617722 7_3:+79184357 None:intergenic
TGAGTAACGTGGTGGCGACG+AGG 0.621614 7_3:+79188471 None:intergenic
TTAAGATAGGAACTCTTACA+GGG 0.623544 7_3:+79187050 None:intergenic
TTACAGTCACAAGTTTCTGG+TGG 0.623640 7_3:-79188433 Msa1127550:CDS
TGCATGGCAAGATCATAAGC+CGG 0.625214 7_3:+79186260 None:intergenic
GAGGCTGAGGAACGAGCCGG+CGG 0.625710 7_3:+79188505 None:intergenic
GAAAAGGAATGGCAGCTGGA+CGG 0.630753 7_3:+79188551 None:intergenic
TAAATACAGGAGGTCCAGGA+GGG 0.633212 7_3:+79188584 None:intergenic
GATCAAACTTCATCTGCCAA+TGG 0.633558 7_3:-79188631 Msa1127550:CDS
CCCGAAACACTATCTACTGT+AGG 0.633775 7_3:+79186653 None:intergenic
AAGATGAGAGGTCCGTGCTG+AGG 0.633786 7_3:-79186376 Msa1127550:CDS
CCTCTTGCAAAAGCATCAGG+TGG 0.634824 7_3:-79187025 Msa1127550:CDS
TGAAAGTGTTCAGGATGAAG+TGG 0.642203 7_3:-79186624 Msa1127550:CDS
ACTGCTGTTGTACTTGACCA+TGG 0.642492 7_3:-79186230 Msa1127550:CDS
TCTGAAACTGGAACAAAACC+AGG 0.643903 7_3:+79187700 None:intergenic
GGTGGAGGAAATCTAGGTGG+TGG 0.646706 7_3:+79188673 None:intergenic
GTACCAGGCTGATGTCTCAA+GGG 0.647899 7_3:-79186693 Msa1127550:CDS
GCTAAAATACTAGTTGAAGG+AGG 0.651512 7_3:+79188697 None:intergenic
GGTCATCAACTCGGTTGAGG+TGG 0.652167 7_3:+79184366 None:intergenic
TAGCATTTGAATATAAAGAG+CGG 0.653919 7_3:+79186817 None:intergenic
GCGCAGTTCTAACAATCCGT+GGG 0.656494 7_3:+79186925 None:intergenic
CGAAAACTGAATGCAAGTGA+TGG 0.657106 7_3:-79187814 Msa1127550:CDS
AATGCCCCAAAACCCAAACT+GGG 0.659386 7_3:+79187976 None:intergenic
CGACCCTTGAGACATCAGCC+TGG 0.660436 7_3:+79186690 None:intergenic
GTAAATACAGGAGGTCCAGG+AGG 0.661317 7_3:+79188583 None:intergenic
TCGTTGTCTAATGCACAGGG+AGG 0.663454 7_3:-79186303 Msa1127550:CDS
TTATTGGCCATGAAGATGAG+AGG 0.665625 7_3:-79186388 Msa1127550:CDS
TTGTGAGCTGGTATGAGACG+TGG 0.668618 7_3:+79184611 None:intergenic
CCAGGAGGGGTACTCAAGTG+AGG 0.670383 7_3:+79188598 None:intergenic
GCTCTCTCTATGGAAACCAA+AGG 0.671019 7_3:-79186770 Msa1127550:CDS
TATTGCTTGGATCAGGCCAG+TGG 0.671309 7_3:-79187852 Msa1127550:CDS
CCACAGCTTTGACAGCGATG+GGG 0.674421 7_3:+79187901 None:intergenic
GATGGAGAATTTAGGTCGCG+AGG 0.676010 7_3:-79187119 Msa1127550:CDS
AAATACAGGAGGTCCAGGAG+GGG 0.683733 7_3:+79188585 None:intergenic
GGGGTTGTCAAAAGGTCAGG+GGG 0.691190 7_3:-79187256 Msa1127550:CDS
ATTGGTGGAGGAAATCTAGG+TGG 0.691906 7_3:+79188670 None:intergenic
AGGGGTTGTCAAAAGGTCAG+GGG 0.692424 7_3:-79187257 Msa1127550:CDS
ACGAGCCAAGAACCATTCAG+TGG 0.695755 7_3:-79186570 Msa1127550:CDS
ACAGGAGATGTAAATACAGG+AGG 0.703342 7_3:+79188574 None:intergenic
GATCCATTTGAGTAACGTGG+TGG 0.707026 7_3:+79188463 None:intergenic
CCATCGCTGTCAAAGCTGTG+GGG 0.707531 7_3:-79187899 Msa1127550:CDS
AAGGATCCATTTGAGTAACG+TGG 0.710338 7_3:+79188460 None:intergenic
TGTGAGCTGGTATGAGACGT+GGG 0.714877 7_3:+79184612 None:intergenic
GATCGCGCTGTATTACCTGG+GGG 0.731713 7_3:+79187923 None:intergenic
TCCCTGTGCATTAGACAACG+AGG 0.756815 7_3:+79186305 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAAAAAATATAATT+TGG + chr7_3:79184698-79184717 None:intergenic 0.0%
!! TTAATTTATAAAACCTTAAA+AGG - chr7_3:79188463-79188482 Msa1127550:CDS 10.0%
!!! AAATGTAGTATAATTGATTT+AGG + chr7_3:79186703-79186722 None:intergenic 15.0%
!!! AAAATTGTTGCATTTTATTT+TGG - chr7_3:79187051-79187070 Msa1127550:CDS 15.0%
!! AAACAAAACAACAAATTTAT+AGG + chr7_3:79187132-79187151 None:intergenic 15.0%
!! ATGTATATACAAAAGTTTAT+AGG + chr7_3:79187583-79187602 None:intergenic 15.0%
!! GTAAAATTATAATTAAAACC+AGG - chr7_3:79187717-79187736 Msa1127550:CDS 15.0%
!!! TTTTTCTTTTTTCTTTTTTG+AGG - chr7_3:79188660-79188679 Msa1127550:CDS 15.0%
!! TCTTTCTGTAATTGTAATAT+TGG + chr7_3:79184126-79184145 None:intergenic 20.0%
!! ATAAAAACTATAAACTACTC+CGG + chr7_3:79184577-79184596 None:intergenic 20.0%
!!! ATTCTTTTCATTTGATAAGT+AGG - chr7_3:79184747-79184766 Msa1127550:intron 20.0%
!! AGATTAGGAATTATACTATA+TGG - chr7_3:79185213-79185232 Msa1127550:intron 20.0%
!!! AAACAATGAAGTTTTGATTT+GGG + chr7_3:79186299-79186318 None:intergenic 20.0%
!!! ATAAAATGCAACAATTTTGT+TGG + chr7_3:79187049-79187068 None:intergenic 20.0%
!!! AAAAAAAAAACTTGTTCTGA+TGG - chr7_3:79187235-79187254 Msa1127550:CDS 20.0%
!!! CTGTAATTTTTCTTCTTTAT+CGG - chr7_3:79187292-79187311 Msa1127550:CDS 20.0%
!! ATTTGCCTAAATTACATATT+TGG - chr7_3:79187382-79187401 Msa1127550:CDS 20.0%
!! AAAGTCCAAATATGTAATTT+AGG + chr7_3:79187390-79187409 None:intergenic 20.0%
!! TATATACAAAAGTTTATAGG+AGG + chr7_3:79187580-79187599 None:intergenic 20.0%
!! AGAGAAAGAAACTAAAAATA+TGG + chr7_3:79187824-79187843 None:intergenic 20.0%
!! AAACAAACAGAACAAAAATA+TGG + chr7_3:79187859-79187878 None:intergenic 20.0%
!!! CTGAATTTACATTTTAAAAC+AGG - chr7_3:79188112-79188131 Msa1127550:intron 20.0%
!!! AATTTACATTTTAAAACAGG+AGG - chr7_3:79188115-79188134 Msa1127550:intron 20.0%
!!! ATTTACATTTTAAAACAGGA+GGG - chr7_3:79188116-79188135 Msa1127550:intron 20.0%
!!! TTATTTAGAACAAACACATT+TGG + chr7_3:79188250-79188269 None:intergenic 20.0%
!!! TAAATTACTTATTTTTGTGC+AGG - chr7_3:79188267-79188286 Msa1127550:intron 20.0%
! TTCTGTAATTGTAATATTGG+TGG + chr7_3:79184123-79184142 None:intergenic 25.0%
! TCAATGTAAGATAATTAAGC+AGG + chr7_3:79184432-79184451 None:intergenic 25.0%
! TCAAATAAGTCAATTCAAAC+AGG + chr7_3:79184478-79184497 None:intergenic 25.0%
! ATATATTGCAACATATTGCT+TGG - chr7_3:79184910-79184929 Msa1127550:intron 25.0%
!! ATAATTCCTAATCTTGTTGT+TGG + chr7_3:79185207-79185226 None:intergenic 25.0%
! TTTCCATATACGGATAATTA+GGG + chr7_3:79185620-79185639 None:intergenic 25.0%
!! TTTTCCATATACGGATAATT+AGG + chr7_3:79185621-79185640 None:intergenic 25.0%
!!! GTCGTTTTTAAATGTTTCAT+GGG + chr7_3:79185937-79185956 None:intergenic 25.0%
! TAGCATTTGAATATAAAGAG+CGG + chr7_3:79185961-79185980 None:intergenic 25.0%
! AACAATAGATGAAAGAATCA+AGG - chr7_3:79186244-79186263 Msa1127550:CDS 25.0%
!! AAGGATATTGGTCTAAAATT+TGG - chr7_3:79186263-79186282 Msa1127550:CDS 25.0%
!!! AAGTTTTGATTTGGGTAATT+GGG + chr7_3:79186291-79186310 None:intergenic 25.0%
!!! GAAACAATGAAGTTTTGATT+TGG + chr7_3:79186300-79186319 None:intergenic 25.0%
! CAAAAGATGCATTTAGAAAT+AGG + chr7_3:79186427-79186446 None:intergenic 25.0%
!! CATTTTCTTAGTTGAAGATA+TGG - chr7_3:79186620-79186639 Msa1127550:CDS 25.0%
!!! AGAAAAAAGGTTAGTTTTCA+TGG - chr7_3:79186787-79186806 Msa1127550:CDS 25.0%
! AGAAATGAAGATGAAAAATG+AGG + chr7_3:79186926-79186945 None:intergenic 25.0%
!!! TCTTCTTTTGTTTTTTCCAA+TGG - chr7_3:79186943-79186962 Msa1127550:CDS 25.0%
! ATTATATGCAAAAGAGCAAA+GGG + chr7_3:79187165-79187184 None:intergenic 25.0%
! TATTATATGCAAAAGAGCAA+AGG + chr7_3:79187166-79187185 None:intergenic 25.0%
! ATCTGTAGACTTTAAATACA+AGG + chr7_3:79187348-79187367 None:intergenic 25.0%
! AAGGAAATTGCATGTATATT+GGG + chr7_3:79187885-79187904 None:intergenic 25.0%
! TAAGGAAATTGCATGTATAT+TGG + chr7_3:79187886-79187905 None:intergenic 25.0%
! TGCAATTTCCTTATATGTTA+TGG - chr7_3:79187893-79187912 Msa1127550:CDS 25.0%
! ATTTCCTTATATGTTATGGA+TGG - chr7_3:79187897-79187916 Msa1127550:CDS 25.0%
! AAATCCATCCATAACATATA+AGG + chr7_3:79187904-79187923 None:intergenic 25.0%
! TATAAAACCTTAAAAGGTCT+TGG - chr7_3:79188469-79188488 Msa1127550:CDS 25.0%
! CAAAAGTGAACAAAATGAAT+GGG + chr7_3:79188583-79188602 None:intergenic 25.0%
! TCAAAAGTGAACAAAATGAA+TGG + chr7_3:79188584-79188603 None:intergenic 25.0%
!!! CTTTTGAAAAGCATTCATAA+AGG - chr7_3:79188597-79188616 Msa1127550:CDS 25.0%
! ATGTTATCATAGAGCAATAA+AGG - chr7_3:79188705-79188724 Msa1127550:CDS 25.0%
TGTAATTGTAATATTGGTGG+AGG + chr7_3:79184120-79184139 None:intergenic 30.0%
TTAGAGGATCATATTCCAAA+TGG - chr7_3:79184366-79184385 Msa1127550:exon 30.0%
TAAATACTCGTGAAACTGTT+TGG - chr7_3:79184516-79184535 Msa1127550:intron 30.0%
AAATACTCGTGAAACTGTTT+GGG - chr7_3:79184517-79184536 Msa1127550:intron 30.0%
TCATCTATTACAAGAACTAC+TGG + chr7_3:79185117-79185136 None:intergenic 30.0%
! AATGCTGTCTTTTCCATATA+CGG + chr7_3:79185630-79185649 None:intergenic 30.0%
TTGAAATGGATGGAGAATTT+AGG - chr7_3:79185648-79185667 Msa1127550:intron 30.0%
! TTGGTTGATATATTATGTGC+TGG - chr7_3:79185696-79185715 Msa1127550:intron 30.0%
TTAAGATAGGAACTCTTACA+GGG + chr7_3:79185728-79185747 None:intergenic 30.0%
! TTTAAGATAGGAACTCTTAC+AGG + chr7_3:79185729-79185748 None:intergenic 30.0%
! TTTGCAAGAGGATTTAAGAT+AGG + chr7_3:79185741-79185760 None:intergenic 30.0%
!! TTGGTTCTTCATGATGATTT+TGG - chr7_3:79185777-79185796 Msa1127550:intron 30.0%
CTTTGGCGTTAATTTACAAA+GGG - chr7_3:79185806-79185825 Msa1127550:intron 30.0%
!!! CGTCGTTTTTAAATGTTTCA+TGG + chr7_3:79185938-79185957 None:intergenic 30.0%
TTGAATACTGAATTGCAAAC+TGG + chr7_3:79186058-79186077 None:intergenic 30.0%
GATGAAAGAATCAAGGATAT+TGG - chr7_3:79186251-79186270 Msa1127550:CDS 30.0%
!!! GAAGTTTTGATTTGGGTAAT+TGG + chr7_3:79186292-79186311 None:intergenic 30.0%
AAAACTTCATTGTTTCCCAA+AGG - chr7_3:79186304-79186323 Msa1127550:CDS 30.0%
! TTTTGATCTATCTCTCAGAA+TGG - chr7_3:79186442-79186461 Msa1127550:CDS 30.0%
! ATTGTCCTTTTATGGTTTAG+AGG - chr7_3:79186660-79186679 Msa1127550:CDS 30.0%
! TTGTCCTTTTATGGTTTAGA+GGG - chr7_3:79186661-79186680 Msa1127550:CDS 30.0%
AATACCCTCTAAACCATAAA+AGG + chr7_3:79186668-79186687 None:intergenic 30.0%
!!! TATGGTTTAGAGGGTATTTT+TGG - chr7_3:79186670-79186689 Msa1127550:CDS 30.0%
!!! ATGGTTTAGAGGGTATTTTT+GGG - chr7_3:79186671-79186690 Msa1127550:CDS 30.0%
AAAACAACATGAACAATTGC+TGG + chr7_3:79186735-79186754 None:intergenic 30.0%
TGTAACCTGTGATAGAAAAA+AGG - chr7_3:79186774-79186793 Msa1127550:CDS 30.0%
!!! ACTAACCTTTTTTCTATCAC+AGG + chr7_3:79186782-79186801 None:intergenic 30.0%
!!! AAGGTTAGTTTTCATGGTAA+TGG - chr7_3:79186793-79186812 Msa1127550:CDS 30.0%
! TAATAATGTGCAGTATTGAG+TGG - chr7_3:79186875-79186894 Msa1127550:CDS 30.0%
AGATGAAAAATGAGGAAACA+AGG + chr7_3:79186918-79186937 None:intergenic 30.0%
!!! TGGAGTATTTTTTTTCCTCA+AGG - chr7_3:79187255-79187274 Msa1127550:CDS 30.0%
!!! GGAGTATTTTTTTTCCTCAA+GGG - chr7_3:79187256-79187275 Msa1127550:CDS 30.0%
!!! GAGTATTTTTTTTCCTCAAG+GGG - chr7_3:79187257-79187276 Msa1127550:CDS 30.0%
ACAATATACTGCAATGCAAA+AGG - chr7_3:79187651-79187670 Msa1127550:CDS 30.0%
!! ATGTTATGGATGGATTTTCT+AGG - chr7_3:79187907-79187926 Msa1127550:CDS 30.0%
!! TGTTATGGATGGATTTTCTA+GGG - chr7_3:79187908-79187927 Msa1127550:CDS 30.0%
!!! ATTACTTATTTTTGTGCAGG+AGG - chr7_3:79188270-79188289 Msa1127550:intron 30.0%
ACAAAACATGCAAACAAACT+TGG + chr7_3:79188500-79188519 None:intergenic 30.0%
!! AAGTTTGTTTGCATGTTTTG+TGG - chr7_3:79188499-79188518 Msa1127550:CDS 30.0%
GTCAAAAAAACTCTCAGATT+CGG - chr7_3:79188552-79188571 Msa1127550:CDS 30.0%
!!! TCTTTTTTGAGGATGTTCAT+CGG - chr7_3:79188671-79188690 Msa1127550:CDS 30.0%
!! GTTTTTGTTCTGGGTTTGAT+GGG + chr7_3:79184026-79184045 None:intergenic 35.0%
!! TGTTTTTGTTCTGGGTTTGA+TGG + chr7_3:79184027-79184046 None:intergenic 35.0%
!!! TTGGAGTCTGTTTTTGTTCT+GGG + chr7_3:79184035-79184054 None:intergenic 35.0%
!!! ATTGGAGTCTGTTTTTGTTC+TGG + chr7_3:79184036-79184055 None:intergenic 35.0%
AAAATACTAGTTGAAGGAGG+AGG + chr7_3:79184078-79184097 None:intergenic 35.0%
GCTAAAATACTAGTTGAAGG+AGG + chr7_3:79184081-79184100 None:intergenic 35.0%
GGTGCTAAAATACTAGTTGA+AGG + chr7_3:79184084-79184103 None:intergenic 35.0%
AATATTGGTGGAGGAAATCT+AGG + chr7_3:79184111-79184130 None:intergenic 35.0%
AACTTGTGACTGTAAGTCAA+AGG + chr7_3:79184337-79184356 None:intergenic 35.0%
! ATGAGCTGAGAAAAGTACAA+AGG + chr7_3:79184400-79184419 None:intergenic 35.0%
! TGTACTTTTCTCAGCTCATA+AGG - chr7_3:79184401-79184420 Msa1127550:CDS 35.0%
ATCAGCTGTTTAAGCAAACA+GGG - chr7_3:79184672-79184691 Msa1127550:intron 35.0%
GTTTGAACAAAGTCAACCAT+TGG + chr7_3:79185042-79185061 None:intergenic 35.0%
! ATGGTTGACTTTGTTCAAAC+TGG - chr7_3:79185042-79185061 Msa1127550:intron 35.0%
! TGGTTGACTTTGTTCAAACT+GGG - chr7_3:79185043-79185062 Msa1127550:intron 35.0%
!! TTCCTAATCTTGTTGTTGGA+GGG + chr7_3:79185203-79185222 None:intergenic 35.0%
!! ATTCCTAATCTTGTTGTTGG+AGG + chr7_3:79185204-79185223 None:intergenic 35.0%
TCTGGTACGTTCAACTTATA+CGG + chr7_3:79185417-79185436 None:intergenic 35.0%
! GTTGCTCTTGCTATAATTCA+GGG - chr7_3:79185474-79185493 Msa1127550:intron 35.0%
AGTAGAATTATTGTCTGTGC+CGG - chr7_3:79185546-79185565 Msa1127550:intron 35.0%
TTAGGGTGGTTAAAAGAATG+AGG + chr7_3:79185603-79185622 None:intergenic 35.0%
! TGGAAAAGACAGCATTGAAA+TGG - chr7_3:79185634-79185653 Msa1127550:intron 35.0%
! AAAGACAGCATTGAAATGGA+TGG - chr7_3:79185638-79185657 Msa1127550:intron 35.0%
CCTTTGTAAATTAACGCCAA+AGG + chr7_3:79185808-79185827 None:intergenic 35.0%
CCTTTGGCGTTAATTTACAA+AGG - chr7_3:79185805-79185824 Msa1127550:intron 35.0%
TTGAGTGATGAGAATATCGT+CGG + chr7_3:79185880-79185899 None:intergenic 35.0%
! TATTCTCATCACTCAAGTTG+TGG - chr7_3:79185884-79185903 Msa1127550:intron 35.0%
! ATTCTCATCACTCAAGTTGT+GGG - chr7_3:79185885-79185904 Msa1127550:intron 35.0%
!! ATCACTTTTGATGTCTCCTT+TGG + chr7_3:79186024-79186043 None:intergenic 35.0%
TCAGTATTCAAATGTGTACC+AGG - chr7_3:79186067-79186086 Msa1127550:intron 35.0%
AAATGAAGACATCAGTTCCA+TGG + chr7_3:79186565-79186584 None:intergenic 35.0%
ATGGAACTGATGTCTTCATT+TGG - chr7_3:79186564-79186583 Msa1127550:CDS 35.0%
! TTGCAGTCATTGTCCTTTTA+TGG - chr7_3:79186652-79186671 Msa1127550:CDS 35.0%
GTCATTGCGTTATGAAATGT+AGG - chr7_3:79186825-79186844 Msa1127550:CDS 35.0%
! ATGCAACAATTTTGTTGGCA+AGG + chr7_3:79187044-79187063 None:intergenic 35.0%
! TGCTGATTGCCATAAATAAC+TGG - chr7_3:79187191-79187210 Msa1127550:CDS 35.0%
CCATCAGAACCAGTTATTTA+TGG + chr7_3:79187203-79187222 None:intergenic 35.0%
!! CCATAAATAACTGGTTCTGA+TGG - chr7_3:79187200-79187219 Msa1127550:CDS 35.0%
CTTTATCGGATGCTTGAATA+AGG - chr7_3:79187306-79187325 Msa1127550:CDS 35.0%
!! CGTTTGTTATGACTGAAACT+GGG + chr7_3:79187425-79187444 None:intergenic 35.0%
!! ACGTTTGTTATGACTGAAAC+TGG + chr7_3:79187426-79187445 None:intergenic 35.0%
TCATCAATTTGATGCCACAT+AGG + chr7_3:79187632-79187651 None:intergenic 35.0%
TTACAACATAGTTTCCCACA+TGG + chr7_3:79187701-79187720 None:intergenic 35.0%
CACAGTTTCAATCAATATCC+TGG + chr7_3:79187738-79187757 None:intergenic 35.0%
TTGTATTTCTTCAGCTTGTG+TGG - chr7_3:79187774-79187793 Msa1127550:CDS 35.0%
!!! AGAAGCACTTTTTCCTTCAT+CGG + chr7_3:79187948-79187967 None:intergenic 35.0%
TCTCCTTCATTATTCATTCC+TGG - chr7_3:79188054-79188073 Msa1127550:intron 35.0%
ACACCAGGAATGAATAATGA+AGG + chr7_3:79188060-79188079 None:intergenic 35.0%
! TTTTACAAGAAGATGACACC+AGG + chr7_3:79188075-79188094 None:intergenic 35.0%
ATGTTAACGTCCTAAGTTGT+GGG + chr7_3:79188303-79188322 None:intergenic 35.0%
TAAAGAGGTAAGGGAAGAAT+GGG + chr7_3:79188767-79188786 None:intergenic 35.0%
GACAATGACTAAAGAGGTAA+GGG + chr7_3:79188776-79188795 None:intergenic 35.0%
AGACAATGACTAAAGAGGTA+AGG + chr7_3:79188777-79188796 None:intergenic 35.0%
AACCCAACACAACCTAATGT+TGG - chr7_3:79183994-79184013 Msa1127550:three_prime_UTR 40.0%
ACCCAACACAACCTAATGTT+GGG - chr7_3:79183995-79184014 Msa1127550:three_prime_UTR 40.0%
! ACCCAACATTAGGTTGTGTT+GGG + chr7_3:79183999-79184018 None:intergenic 40.0%
! AACCCAACATTAGGTTGTGT+TGG + chr7_3:79184000-79184019 None:intergenic 40.0%
GATCAAACTTCATCTGCCAA+TGG - chr7_3:79184144-79184163 Msa1127550:three_prime_UTR 40.0%
ACAGGAGATGTAAATACAGG+AGG + chr7_3:79184204-79184223 None:intergenic 40.0%
AAGGATCCATTTGAGTAACG+TGG + chr7_3:79184318-79184337 None:intergenic 40.0%
GACTTACAGTCACAAGTTTC+TGG - chr7_3:79184339-79184358 Msa1127550:three_prime_UTR 40.0%
! TTACAGTCACAAGTTTCTGG+TGG - chr7_3:79184342-79184361 Msa1127550:three_prime_UTR 40.0%
ACAAAGGATGACTCTCCATT+TGG + chr7_3:79184384-79184403 None:intergenic 40.0%
GATCAGCTGTTTAAGCAAAC+AGG - chr7_3:79184671-79184690 Msa1127550:intron 40.0%
ACAAGCAAATGTACCCAGTT+TGG - chr7_3:79184786-79184805 Msa1127550:CDS 40.0%
CAAGCAAATGTACCCAGTTT+GGG - chr7_3:79184787-79184806 Msa1127550:CDS 40.0%
!! AATGTACCCAGTTTGGGTTT+TGG - chr7_3:79184793-79184812 Msa1127550:CDS 40.0%
!! ATGTACCCAGTTTGGGTTTT+GGG - chr7_3:79184794-79184813 Msa1127550:CDS 40.0%
TGCAACATATTGCTTGGATC+AGG - chr7_3:79184916-79184935 Msa1127550:intron 40.0%
GACATATAACACATTGCCAC+TGG + chr7_3:79184942-79184961 None:intergenic 40.0%
CGAAAACTGAATGCAAGTGA+TGG - chr7_3:79184961-79184980 Msa1127550:intron 40.0%
TCCAGAACTATCTTCACCAA+TGG - chr7_3:79185023-79185042 Msa1127550:intron 40.0%
ACCATTGGTGAAGATAGTTC+TGG + chr7_3:79185027-79185046 None:intergenic 40.0%
! TCTGAAACTGGAACAAAACC+AGG + chr7_3:79185078-79185097 None:intergenic 40.0%
!! GACATTCTGGAATCTGAAAC+TGG + chr7_3:79185090-79185109 None:intergenic 40.0%
TAAAAAGTCGTACACCGACA+CGG + chr7_3:79185244-79185263 None:intergenic 40.0%
ACCAAGTGAAGATTCTCTGA+AGG - chr7_3:79185308-79185327 Msa1127550:intron 40.0%
! TCTCTGAAGGCTTTGCTTTA+TGG - chr7_3:79185321-79185340 Msa1127550:intron 40.0%
AAGGCTTTGCTTTATGGTAC+AGG - chr7_3:79185327-79185346 Msa1127550:intron 40.0%
CGGCGTCAATGATGAAAATA+TGG + chr7_3:79185397-79185416 None:intergenic 40.0%
! GGTTGCTCTTGCTATAATTC+AGG - chr7_3:79185473-79185492 Msa1127550:intron 40.0%
AAAGAATGAGGAACAGATCC+AGG + chr7_3:79185591-79185610 None:intergenic 40.0%
CCATATACGGATAATTAGGG+TGG + chr7_3:79185617-79185636 None:intergenic 40.0%
CCACCCTAATTATCCGTATA+TGG - chr7_3:79185614-79185633 Msa1127550:intron 40.0%
GGCTCATCGACACAATATAT+TGG - chr7_3:79185677-79185696 Msa1127550:intron 40.0%
!! AATCCTCTTGCAAAAGCATC+AGG - chr7_3:79185747-79185766 Msa1127550:intron 40.0%
!!! AAAAGCATCAGGTGGAGTTT+TGG - chr7_3:79185758-79185777 Msa1127550:intron 40.0%
!! GATGATTTTGGAGAAGCCTT+TGG - chr7_3:79185789-79185808 Msa1127550:intron 40.0%
GCCTACAGTAGATAGTGTTT+CGG - chr7_3:79186121-79186140 Msa1127550:intron 40.0%
CCTACAGTAGATAGTGTTTC+GGG - chr7_3:79186122-79186141 Msa1127550:intron 40.0%
!! GGGATATCTTGAAAGTGTTC+AGG - chr7_3:79186142-79186161 Msa1127550:intron 40.0%
!! TGAAAGTGTTCAGGATGAAG+TGG - chr7_3:79186151-79186170 Msa1127550:intron 40.0%
ATTCAGTGGCTGTTGATATG+CGG - chr7_3:79186219-79186238 Msa1127550:CDS 40.0%
GTAAGAGAGAAAGCTCCTTT+GGG + chr7_3:79186322-79186341 None:intergenic 40.0%
AAAGGAGCTTTCTCTCTTAC+CGG - chr7_3:79186322-79186341 Msa1127550:CDS 40.0%
CCAATAATGCATCCCAATAG+TGG + chr7_3:79186374-79186393 None:intergenic 40.0%
CCACTATTGGGATGCATTAT+TGG - chr7_3:79186371-79186390 Msa1127550:CDS 40.0%
TTATTGGCCATGAAGATGAG+AGG - chr7_3:79186387-79186406 Msa1127550:CDS 40.0%
TAGAAATAGGTTCCTCAGCA+CGG + chr7_3:79186414-79186433 None:intergenic 40.0%
TGATCTATCTCTCAGAATGG+TGG - chr7_3:79186445-79186464 Msa1127550:CDS 40.0%
AACTGATGTCTTCATTTGGC+TGG - chr7_3:79186568-79186587 Msa1127550:CDS 40.0%
TCTATCACAGGTTACACAAC+AGG + chr7_3:79186770-79186789 None:intergenic 40.0%
TGTAGGAACAGTAGTTAGTC+TGG - chr7_3:79186842-79186861 Msa1127550:CDS 40.0%
GATGATTGTCTGAATCAACG+TGG - chr7_3:79187073-79187092 Msa1127550:CDS 40.0%
ATATGCAAAAGAGCAAAGGG+CGG + chr7_3:79187162-79187181 None:intergenic 40.0%
TATCGGATGCTTGAATAAGG+CGG - chr7_3:79187309-79187328 Msa1127550:CDS 40.0%
!! AAAGCAACAATTTGTTGCCG+CGG + chr7_3:79187480-79187499 None:intergenic 40.0%
!! CGGCAACAAATTGTTGCTTT+CGG - chr7_3:79187480-79187499 Msa1127550:CDS 40.0%
!! GGCAACAAATTGTTGCTTTC+GGG - chr7_3:79187481-79187500 Msa1127550:CDS 40.0%
CAAAGTTTCTTCTGCCTATG+TGG - chr7_3:79187615-79187634 Msa1127550:CDS 40.0%
TATTTCTTCAGCTTGTGTGG+TGG - chr7_3:79187777-79187796 Msa1127550:CDS 40.0%
! GGCTCTTGGAACATTTTTGT+TGG - chr7_3:79187798-79187817 Msa1127550:CDS 40.0%
!! AGGAAAAAGTGCTTCTGCTT+TGG - chr7_3:79187952-79187971 Msa1127550:CDS 40.0%
GAAAACTGACCTTGAATGCA+AGG + chr7_3:79188036-79188055 None:intergenic 40.0%
TTGTTTACCTGCTCATAAGG+AGG + chr7_3:79188194-79188213 None:intergenic 40.0%
!! GTGTTGTTTACCTGCTCATA+AGG + chr7_3:79188197-79188216 None:intergenic 40.0%
! CATTTGGAGTCTCACATCAA+AGG + chr7_3:79188234-79188253 None:intergenic 40.0%
!!! TTATTTTTGTGCAGGAGGCA+AGG - chr7_3:79188275-79188294 Msa1127550:intron 40.0%
GATGTTAACGTCCTAAGTTG+TGG + chr7_3:79188304-79188323 None:intergenic 40.0%
ACGATCCAAGTTTCTGTGAA+TGG - chr7_3:79188365-79188384 Msa1127550:intron 40.0%
TGAATGGATGCGAAGTTTGA+AGG - chr7_3:79188381-79188400 Msa1127550:intron 40.0%
GTCTTCTGCATTAGGTGATT+CGG - chr7_3:79188436-79188455 Msa1127550:CDS 40.0%
GTGAACAAAATGAATGGGAG+AGG + chr7_3:79188578-79188597 None:intergenic 40.0%
CTAAAGAGGTAAGGGAAGAA+TGG + chr7_3:79188768-79188787 None:intergenic 40.0%
CCATGAGACAATGACTAAAG+AGG + chr7_3:79188782-79188801 None:intergenic 40.0%
CCTCTTTAGTCATTGTCTCA+TGG - chr7_3:79188779-79188798 Msa1127550:CDS 40.0%
AGTCATTGTCTCATGGAAAG+TGG - chr7_3:79188786-79188805 Msa1127550:CDS 40.0%
GATGGGATGAACCCAACATT+AGG + chr7_3:79184009-79184028 None:intergenic 45.0%
ATACTAGTTGAAGGAGGAGG+AGG + chr7_3:79184075-79184094 None:intergenic 45.0%
ATTGGTGGAGGAAATCTAGG+TGG + chr7_3:79184108-79184127 None:intergenic 45.0%
TAAATACAGGAGGTCCAGGA+GGG + chr7_3:79184194-79184213 None:intergenic 45.0%
GATGTAAATACAGGAGGTCC+AGG + chr7_3:79184198-79184217 None:intergenic 45.0%
CGGACAGGAGATGTAAATAC+AGG + chr7_3:79184207-79184226 None:intergenic 45.0%
GGGTGAAGTTCGAAAAGGAA+TGG + chr7_3:79184238-79184257 None:intergenic 45.0%
GATCCATTTGAGTAACGTGG+TGG + chr7_3:79184315-79184334 None:intergenic 45.0%
!! ACAAGTTTCTGGTGGCTTAG+AGG - chr7_3:79184350-79184369 Msa1127550:three_prime_UTR 45.0%
! AAACTGTTTGGGAGAGCACA+TGG - chr7_3:79184528-79184547 Msa1127550:intron 45.0%
TGTTATCACAAGAACCTCGC+CGG - chr7_3:79184555-79184574 Msa1127550:intron 45.0%
AACTATAAACTACTCCGGCG+AGG + chr7_3:79184572-79184591 None:intergenic 45.0%
!! TGTACCCAGTTTGGGTTTTG+GGG - chr7_3:79184795-79184814 Msa1127550:CDS 45.0%
AATGCCCCAAAACCCAAACT+GGG + chr7_3:79184802-79184821 None:intergenic 45.0%
AACTACTGGTGCAGACATTC+TGG + chr7_3:79185103-79185122 None:intergenic 45.0%
! CTCTGAAGATGCTGTAAGTG+AGG + chr7_3:79185153-79185172 None:intergenic 45.0%
CTCCCTCCAACAACAAGATT+AGG - chr7_3:79185198-79185217 Msa1127550:intron 45.0%
GCCTTCAGAGAATCTTCACT+TGG + chr7_3:79185312-79185331 None:intergenic 45.0%
TACCAGAAGCTTCCAGAGAT+CGG - chr7_3:79185430-79185449 Msa1127550:intron 45.0%
AGAATTATTGTCTGTGCCGG+TGG - chr7_3:79185549-79185568 Msa1127550:intron 45.0%
GCTCTCTCTATGGAAACCAA+AGG - chr7_3:79186005-79186024 Msa1127550:intron 45.0%
CCCGAAACACTATCTACTGT+AGG + chr7_3:79186125-79186144 None:intergenic 45.0%
AACAGCCACTGAATGGTTCT+TGG + chr7_3:79186213-79186232 None:intergenic 45.0%
GCATATCAACAGCCACTGAA+TGG + chr7_3:79186220-79186239 None:intergenic 45.0%
TTCAGTGGCTGTTGATATGC+GGG - chr7_3:79186220-79186239 Msa1127550:CDS 45.0%
GGTAAGAGAGAAAGCTCCTT+TGG + chr7_3:79186323-79186342 None:intergenic 45.0%
! TCCTTTTCCATCTCAGGAGA+GGG - chr7_3:79186348-79186367 Msa1127550:CDS 45.0%
TCCTCGTTGTCTAATGCACA+GGG - chr7_3:79186469-79186488 Msa1127550:CDS 45.0%
TGCATGGCAAGATCATAAGC+CGG + chr7_3:79186518-79186537 None:intergenic 45.0%
AACAGCAGTATCAGACTGCA+TGG + chr7_3:79186534-79186553 None:intergenic 45.0%
ACTGCTGTTGTACTTGACCA+TGG - chr7_3:79186545-79186564 Msa1127550:CDS 45.0%
CAACATGAACAATTGCTGGC+AGG + chr7_3:79186731-79186750 None:intergenic 45.0%
! TGCAGTATTGAGTGGTGCAT+AGG - chr7_3:79186883-79186902 Msa1127550:CDS 45.0%
AGGCTGGGTTGTATTTCCAT+TGG + chr7_3:79186962-79186981 None:intergenic 45.0%
! TTTCCTCAAGGGGTATGAGT+TGG - chr7_3:79187267-79187286 Msa1127550:CDS 45.0%
! TTCCTCAAGGGGTATGAGTT+GGG - chr7_3:79187268-79187287 Msa1127550:CDS 45.0%
!! GTTTGTTTTCACACTGACCG+CGG - chr7_3:79187460-79187479 Msa1127550:CDS 45.0%
TGCAATGGCACTGCAGTATT+TGG + chr7_3:79187677-79187696 None:intergenic 45.0%
TCCTCGTATCCTTGCATTCA+AGG - chr7_3:79188024-79188043 Msa1127550:intron 45.0%
ACCTTGAATGCAAGGATACG+AGG + chr7_3:79188028-79188047 None:intergenic 45.0%
CGCATCCATTCACAGAAACT+TGG + chr7_3:79188373-79188392 None:intergenic 45.0%
AAGACTACCGGTCATCAACT+CGG + chr7_3:79188421-79188440 None:intergenic 45.0%
CACCTAATGCAGAAGACTAC+CGG + chr7_3:79188433-79188452 None:intergenic 45.0%
! TTCTGCATTAGGTGATTCGG+TGG - chr7_3:79188439-79188458 Msa1127550:CDS 45.0%
! GGCTTCACCAAGACCTTTTA+AGG + chr7_3:79188479-79188498 None:intergenic 45.0%
!! TTATACATTAAAAAAAAAAA+AGG + chr7_3:79184723-79184742 None:intergenic 5.0%
GGAGGGGGATGAATTGGAAT+TGG + chr7_3:79184054-79184073 None:intergenic 50.0%
TAGTTGAAGGAGGAGGAGGA+GGG + chr7_3:79184071-79184090 None:intergenic 50.0%
AAATACAGGAGGTCCAGGAG+GGG + chr7_3:79184193-79184212 None:intergenic 50.0%
GTAAATACAGGAGGTCCAGG+AGG + chr7_3:79184195-79184214 None:intergenic 50.0%
GAAAAGGAATGGCAGCTGGA+CGG + chr7_3:79184227-79184246 None:intergenic 50.0%
GTTCGAAAAGGAATGGCAGC+TGG + chr7_3:79184231-79184250 None:intergenic 50.0%
GAAGCGGGTGAAGTTCGAAA+AGG + chr7_3:79184243-79184262 None:intergenic 50.0%
TCGCCACCACGTTACTCAAA+TGG - chr7_3:79184309-79184328 Msa1127550:three_prime_UTR 50.0%
CAATGCCCCAAAACCCAAAC+TGG + chr7_3:79184803-79184822 None:intergenic 50.0%
!!! CAGTTTGGGTTTTGGGGCAT+TGG - chr7_3:79184801-79184820 Msa1127550:CDS 50.0%
TATTGCTTGGATCAGGCCAG+TGG - chr7_3:79184923-79184942 Msa1127550:intron 50.0%
TGGAACAAAACCAGGTCGCT+TGG + chr7_3:79185070-79185089 None:intergenic 50.0%
ACTATATGGCCGTACCGTGT+CGG - chr7_3:79185227-79185246 Msa1127550:intron 50.0%
CATCTGCTGATGTGCTTCCT+GGG - chr7_3:79185277-79185296 Msa1127550:intron 50.0%
ATCTGCTGATGTGCTTCCTG+GGG - chr7_3:79185278-79185297 Msa1127550:intron 50.0%
GTCACCAATGCATGCTTCAC+TGG - chr7_3:79185359-79185378 Msa1127550:intron 50.0%
ACAGCCAGTGAAGCATGCAT+TGG + chr7_3:79185366-79185385 None:intergenic 50.0%
CAACCTCAACAGCAGTTCCT+AGG + chr7_3:79185458-79185477 None:intergenic 50.0%
CTCGAGACAGATCAGCAGAT+GGG + chr7_3:79185500-79185519 None:intergenic 50.0%
CATCTGCTGATCTGTCTCGA+GGG - chr7_3:79185499-79185518 Msa1127550:intron 50.0%
ATCTGCTGATCTGTCTCGAG+GGG - chr7_3:79185500-79185519 Msa1127550:intron 50.0%
TGTCTCGAGGGGTTGTCAAA+AGG - chr7_3:79185511-79185530 Msa1127550:intron 50.0%
GAGGGGTTGTCAAAAGGTCA+GGG - chr7_3:79185517-79185536 Msa1127550:intron 50.0%
AGGGGTTGTCAAAAGGTCAG+GGG - chr7_3:79185518-79185537 Msa1127550:intron 50.0%
GATCCAGGCCCATAAGTGTT+CGG + chr7_3:79185576-79185595 None:intergenic 50.0%
GATGGAGAATTTAGGTCGCG+AGG - chr7_3:79185656-79185675 Msa1127550:intron 50.0%
! CCACCTGATGCTTTTGCAAG+AGG + chr7_3:79185753-79185772 None:intergenic 50.0%
!! CCTCTTGCAAAAGCATCAGG+TGG - chr7_3:79185750-79185769 Msa1127550:intron 50.0%
! GCGCAGTTCTAACAATCCGT+GGG + chr7_3:79185853-79185872 None:intergenic 50.0%
! TGCGCAGTTCTAACAATCCG+TGG + chr7_3:79185854-79185873 None:intergenic 50.0%
! ATCACTCAAGTTGTGGGTCC+AGG - chr7_3:79185891-79185910 Msa1127550:intron 50.0%
! TCACTCAAGTTGTGGGTCCA+GGG - chr7_3:79185892-79185911 Msa1127550:intron 50.0%
TCTACATGAGACTCTTCCCC+TGG + chr7_3:79185912-79185931 None:intergenic 50.0%
ACAGAGCTTCGCTCTCTCTA+TGG - chr7_3:79185995-79186014 Msa1127550:intron 50.0%
TGTACCAGGCTGATGTCTCA+AGG - chr7_3:79186081-79186100 Msa1127550:intron 50.0%
GTACCAGGCTGATGTCTCAA+GGG - chr7_3:79186082-79186101 Msa1127550:intron 50.0%
ACGAGCCAAGAACCATTCAG+TGG - chr7_3:79186205-79186224 Msa1127550:intron 50.0%
CTGAGATGGAAAAGGAGCTC+CGG + chr7_3:79186344-79186363 None:intergenic 50.0%
! CTCCTTTTCCATCTCAGGAG+AGG - chr7_3:79186347-79186366 Msa1127550:CDS 50.0%
CTCCTCGTTGTCTAATGCAC+AGG - chr7_3:79186468-79186487 Msa1127550:CDS 50.0%
TCCCTGTGCATTAGACAACG+AGG + chr7_3:79186473-79186492 None:intergenic 50.0%
TCGTTGTCTAATGCACAGGG+AGG - chr7_3:79186472-79186491 Msa1127550:CDS 50.0%
CGTTGTCTAATGCACAGGGA+GGG - chr7_3:79186473-79186492 Msa1127550:CDS 50.0%
GTTGTCTAATGCACAGGGAG+GGG - chr7_3:79186474-79186493 Msa1127550:CDS 50.0%
TTGTCTAATGCACAGGGAGG+GGG - chr7_3:79186475-79186494 Msa1127550:CDS 50.0%
!! GGGAACTTTTGAGGAGCTAC+CGG - chr7_3:79186496-79186515 Msa1127550:CDS 50.0%
!!! ACCCAGCCTTTTTTGTCACC+AGG - chr7_3:79186973-79186992 Msa1127550:CDS 50.0%
GCCTGGTGACAAAAAAGGCT+GGG + chr7_3:79186977-79186996 None:intergenic 50.0%
! TGCTGGCCTGGTGACAAAAA+AGG + chr7_3:79186982-79187001 None:intergenic 50.0%
AGTTTCCCACATGGCTGCAA+TGG + chr7_3:79187692-79187711 None:intergenic 50.0%
GCTGAACTTGTAGCCGATGA+AGG - chr7_3:79187932-79187951 Msa1127550:CDS 50.0%
TTTGGCTGCATGCAGGACAT+TGG - chr7_3:79187970-79187989 Msa1127550:CDS 50.0%
AGGAGCTGGAAAACGGAACT+CGG + chr7_3:79188008-79188027 None:intergenic 50.0%
GGATACGAGGAGCTGGAAAA+CGG + chr7_3:79188015-79188034 None:intergenic 50.0%
AATGCAAGGATACGAGGAGC+TGG + chr7_3:79188022-79188041 None:intergenic 50.0%
TGTGAGCTGGTATGAGACGT+GGG + chr7_3:79188166-79188185 None:intergenic 50.0%
TTGTGAGCTGGTATGAGACG+TGG + chr7_3:79188167-79188186 None:intergenic 50.0%
ACGTCTCATACCAGCTCACA+AGG - chr7_3:79188166-79188185 Msa1127550:intron 50.0%
TAAGGAGGATCCTTGTGAGC+TGG + chr7_3:79188179-79188198 None:intergenic 50.0%
CAAGGATCCTCCTTATGAGC+AGG - chr7_3:79188184-79188203 Msa1127550:intron 50.0%
AGGCAAGGTTCCCACAACTT+AGG - chr7_3:79188290-79188309 Msa1127550:intron 50.0%
!! ACCTCAACCGAGTTGATGAC+CGG - chr7_3:79188411-79188430 Msa1127550:CDS 50.0%
GACCGGTAGTCTTCTGCATT+AGG - chr7_3:79188428-79188447 Msa1127550:CDS 50.0%
AGTTGAAGGAGGAGGAGGAG+GGG + chr7_3:79184070-79184089 None:intergenic 55.0%
CTAGTTGAAGGAGGAGGAGG+AGG + chr7_3:79184072-79184091 None:intergenic 55.0%
GGTGGAGGAAATCTAGGTGG+TGG + chr7_3:79184105-79184124 None:intergenic 55.0%
GTGAGGAACTGGACTGCCAT+TGG + chr7_3:79184163-79184182 None:intergenic 55.0%
! GGGGTACTCAAGTGAGGAAC+TGG + chr7_3:79184174-79184193 None:intergenic 55.0%
GGTTGGCAAAGAAGAGGCTG+AGG + chr7_3:79184286-79184305 None:intergenic 55.0%
CGACGAGGTTGGCAAAGAAG+AGG + chr7_3:79184292-79184311 None:intergenic 55.0%
!! TTTGGGGCATTGGTCTCTCC+TGG - chr7_3:79184811-79184830 Msa1127550:CDS 55.0%
!! GGCATTGGTCTCTCCTGGTA+GGG - chr7_3:79184816-79184835 Msa1127550:CDS 55.0%
! ATTGGTCTCTCCTGGTAGGG+AGG - chr7_3:79184819-79184838 Msa1127550:CDS 55.0%
GATCGCGCTGTATTACCTGG+GGG + chr7_3:79184855-79184874 None:intergenic 55.0%
GGATCGCGCTGTATTACCTG+GGG + chr7_3:79184856-79184875 None:intergenic 55.0%
GGGATCGCGCTGTATTACCT+GGG + chr7_3:79184857-79184876 None:intergenic 55.0%
! CCACAGCTTTGACAGCGATG+GGG + chr7_3:79184877-79184896 None:intergenic 55.0%
! CCCACAGCTTTGACAGCGAT+GGG + chr7_3:79184878-79184897 None:intergenic 55.0%
CCCATCGCTGTCAAAGCTGT+GGG - chr7_3:79184875-79184894 Msa1127550:intron 55.0%
CCATCGCTGTCAAAGCTGTG+GGG - chr7_3:79184876-79184895 Msa1127550:intron 55.0%
AGTCGTACACCGACACGGTA+CGG + chr7_3:79185239-79185258 None:intergenic 55.0%
GCATCTGCTGATGTGCTTCC+TGG - chr7_3:79185276-79185295 Msa1127550:intron 55.0%
! TCACTTGGTGACTTGTCCCC+AGG + chr7_3:79185297-79185316 None:intergenic 55.0%
! CACCGATCTCTGGAAGCTTC+TGG + chr7_3:79185435-79185454 None:intergenic 55.0%
!! AGTTCCTAGGCACCGATCTC+TGG + chr7_3:79185445-79185464 None:intergenic 55.0%
GTGCCTAGGAACTGCTGTTG+AGG - chr7_3:79185452-79185471 Msa1127550:intron 55.0%
CCTCGAGACAGATCAGCAGA+TGG + chr7_3:79185501-79185520 None:intergenic 55.0%
CCATCTGCTGATCTGTCTCG+AGG - chr7_3:79185498-79185517 Msa1127550:intron 55.0%
CGAGGGGTTGTCAAAAGGTC+AGG - chr7_3:79185516-79185535 Msa1127550:intron 55.0%
GGGGTTGTCAAAAGGTCAGG+GGG - chr7_3:79185519-79185538 Msa1127550:intron 55.0%
CCCATAAGTGTTCGGTCCAC+CGG + chr7_3:79185568-79185587 None:intergenic 55.0%
CCGGTGGACCGAACACTTAT+GGG - chr7_3:79185565-79185584 Msa1127550:intron 55.0%
! CACTCAAGTTGTGGGTCCAG+GGG - chr7_3:79185893-79185912 Msa1127550:intron 55.0%
! CGGAGCTCCTTTTCCATCTC+AGG - chr7_3:79186342-79186361 Msa1127550:CDS 55.0%
GCCCTCTCCTGAGATGGAAA+AGG + chr7_3:79186352-79186371 None:intergenic 55.0%
ATAGTGGCCCTCTCCTGAGA+TGG + chr7_3:79186358-79186377 None:intergenic 55.0%
TCTCAGGAGAGGGCCACTAT+TGG - chr7_3:79186358-79186377 Msa1127550:CDS 55.0%
CTCAGGAGAGGGCCACTATT+GGG - chr7_3:79186359-79186378 Msa1127550:CDS 55.0%
GCACGGACCTCTCATCTTCA+TGG + chr7_3:79186397-79186416 None:intergenic 55.0%
AAGATGAGAGGTCCGTGCTG+AGG - chr7_3:79186399-79186418 Msa1127550:CDS 55.0%
TGTCTAATGCACAGGGAGGG+GGG - chr7_3:79186476-79186495 Msa1127550:CDS 55.0%
GGCCTGGTGACAAAAAAGGC+TGG + chr7_3:79186978-79186997 None:intergenic 55.0%
AGCTGCAGTTGCTGCTGGAA+TGG + chr7_3:79187009-79187028 None:intergenic 55.0%
ATTCCAGCAGCAACTGCAGC+TGG - chr7_3:79187008-79187027 Msa1127550:CDS 55.0%
GACCCAACTCATACCCCTTG+AGG + chr7_3:79187273-79187292 None:intergenic 55.0%
! CAGTGCCATTGCAGCCATGT+GGG - chr7_3:79187684-79187703 Msa1127550:CDS 55.0%
TCAGCTTGTGTGGTGGCTCT+TGG - chr7_3:79187784-79187803 Msa1127550:CDS 55.0%
CTTCTGCTTTGGCTGCATGC+AGG - chr7_3:79187963-79187982 Msa1127550:CDS 55.0%
AAAACAGGAGGGTAGCTCGC+AGG - chr7_3:79188127-79188146 Msa1127550:intron 55.0%
GGTCATCAACTCGGTTGAGG+TGG + chr7_3:79188412-79188431 None:intergenic 55.0%
ACCGGTCATCAACTCGGTTG+AGG + chr7_3:79188415-79188434 None:intergenic 55.0%
GGAGGAGGAGGGGGATGAAT+TGG + chr7_3:79184060-79184079 None:intergenic 60.0%
GTTGAAGGAGGAGGAGGAGG+GGG + chr7_3:79184069-79184088 None:intergenic 60.0%
!! CCAGGAGGGGTACTCAAGTG+AGG + chr7_3:79184180-79184199 None:intergenic 60.0%
CCTCACTTGAGTACCCCTCC+TGG - chr7_3:79184177-79184196 Msa1127550:three_prime_UTR 60.0%
GAAGAGGCTGAGGAACGAGC+CGG + chr7_3:79184276-79184295 None:intergenic 60.0%
! TAACGTGGTGGCGACGAGGT+TGG + chr7_3:79184303-79184322 None:intergenic 60.0%
! TGAGTAACGTGGTGGCGACG+AGG + chr7_3:79184307-79184326 None:intergenic 60.0%
!! GGGCATTGGTCTCTCCTGGT+AGG - chr7_3:79184815-79184834 Msa1127550:CDS 60.0%
CCAGTTGAGACCTCCCTACC+AGG + chr7_3:79184832-79184851 None:intergenic 60.0%
CCTGGTAGGGAGGTCTCAAC+TGG - chr7_3:79184829-79184848 Msa1127550:CDS 60.0%
GGGGATCGCGCTGTATTACC+TGG + chr7_3:79184858-79184877 None:intergenic 60.0%
CCCCATCGCTGTCAAAGCTG+TGG - chr7_3:79184874-79184893 Msa1127550:intron 60.0%
! CCCCACAGCTTTGACAGCGA+TGG + chr7_3:79184879-79184898 None:intergenic 60.0%
CAAACTGGGACCAAGCGACC+TGG - chr7_3:79185057-79185076 Msa1127550:intron 60.0%
! GCTTCCAGAGATCGGTGCCT+AGG - chr7_3:79185438-79185457 Msa1127550:intron 60.0%
GCCGGTGGACCGAACACTTA+TGG - chr7_3:79185564-79185583 Msa1127550:intron 60.0%
GGACCGAACACTTATGGGCC+TGG - chr7_3:79185570-79185589 Msa1127550:intron 60.0%
CGACCCTTGAGACATCAGCC+TGG + chr7_3:79186088-79186107 None:intergenic 60.0%
! CAGGGAGGGGGGAACTTTTG+AGG - chr7_3:79186487-79186506 Msa1127550:CDS 60.0%
CAACTGCAGCTGGTGGCAGA+TGG - chr7_3:79187018-79187037 Msa1127550:CDS 60.0%
! GCAGTGCCATTGCAGCCATG+TGG - chr7_3:79187683-79187702 Msa1127550:CDS 60.0%
GGAATGGCAGCTGGACGGAC+AGG + chr7_3:79184222-79184241 None:intergenic 65.0%
! AGGGCGTCTGCCAGATCAGC+AGG - chr7_3:79185825-79185844 Msa1127550:intron 65.0%
GCCAGATCAGCAGGCTCCCA+CGG - chr7_3:79185834-79185853 Msa1127550:intron 65.0%
TCCGTGGGAGCCTGCTGATC+TGG + chr7_3:79185838-79185857 None:intergenic 65.0%
TGGAATGGCAGCTGCTGGCC+TGG + chr7_3:79186994-79187013 None:intergenic 65.0%
GCTGCTGGAATGGCAGCTGC+TGG + chr7_3:79186999-79187018 None:intergenic 65.0%
CCACCAGCTGCAGTTGCTGC+TGG + chr7_3:79187014-79187033 None:intergenic 65.0%
CCAGCAGCAACTGCAGCTGG+TGG - chr7_3:79187011-79187030 Msa1127550:CDS 65.0%
GAGGCTGAGGAACGAGCCGG+CGG + chr7_3:79184273-79184292 None:intergenic 70.0%
GGAGGTCTCAACTGGCCCCC+AGG - chr7_3:79184837-79184856 Msa1127550:CDS 70.0%
ACCCGCTTCGCCTCAGCCGC+CGG - chr7_3:79184254-79184273 Msa1127550:three_prime_UTR 75.0%
AGCCGGCGGCTGAGGCGAAG+CGG + chr7_3:79184259-79184278 None:intergenic 75.0%
GAGGAACGAGCCGGCGGCTG+AGG + chr7_3:79184267-79184286 None:intergenic 75.0%
! GCCGGCGGCTGAGGCGAAGC+GGG + chr7_3:79184258-79184277 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 79183985 79188812 79183985 ID=Msa1127550;Name=Msa1127550
chr7_3 mRNA 79183985 79188812 79183985 ID=Msa1127550-mRNA-1;Parent=Msa1127550;Name=Msa1127550-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.8|1|1|1|5|386|854
chr7_3 exon 79183985 79184508 79183985 ID=Msa1127550-mRNA-1:exon:22328;Parent=Msa1127550-mRNA-1
chr7_3 exon 79184592 79184663 79184592 ID=Msa1127550-mRNA-1:exon:22327;Parent=Msa1127550-mRNA-1
chr7_3 exon 79184752 79184868 79184752 ID=Msa1127550-mRNA-1:exon:22326;Parent=Msa1127550-mRNA-1
chr7_3 exon 79186208 79188028 79186208 ID=Msa1127550-mRNA-1:exon:22325;Parent=Msa1127550-mRNA-1
chr7_3 exon 79188396 79188812 79188396 ID=Msa1127550-mRNA-1:exon:22324;Parent=Msa1127550-mRNA-1
chr7_3 CDS 79188396 79188812 79188396 ID=Msa1127550-mRNA-1:cds;Parent=Msa1127550-mRNA-1
chr7_3 CDS 79186208 79188028 79186208 ID=Msa1127550-mRNA-1:cds;Parent=Msa1127550-mRNA-1
chr7_3 CDS 79184752 79184868 79184752 ID=Msa1127550-mRNA-1:cds;Parent=Msa1127550-mRNA-1
chr7_3 CDS 79184592 79184663 79184592 ID=Msa1127550-mRNA-1:cds;Parent=Msa1127550-mRNA-1
chr7_3 CDS 79184371 79184508 79184371 ID=Msa1127550-mRNA-1:cds;Parent=Msa1127550-mRNA-1
chr7_3 three_prime_UTR 79183985 79184370 79183985 ID=Msa1127550-mRNA-1:three_prime_utr;Parent=Msa1127550-mRNA-1
Gene Sequence

>Msa1127550

ATGGCTAATAACCCAACACAACCTAATGTTGGGTTCATCCCATCAAACCCAGAACAAAAACAGACTCCAATTCCAATTCATCCCCCTCCTCCTCCTCCTTCAACTAGTATTTTAGCACCACCACCTAGATTTCCTCCACCAATATTACAATTACAGAAAGATCAAACTTCATCTGCCAATGGCAGTCCAGTTCCTCACTTGAGTACCCCTCCTGGACCTCCTGTATTTACATCTCCTGTCCGTCCAGCTGCCATTCCTTTTCGAACTTCACCCGCTTCGCCTCAGCCGCCGGCTCGTTCCTCAGCCTCTTCTTTGCCAACCTCGTCGCCACCACGTTACTCAAATGGATCCTTTGACTTACAGTCACAAGTTTCTGGTGGCTTAGAGGATCATATTCCAAATGGAGAGTCATCCTTTGTATTGAAGCAGAAGAAACAAGCAAATGTACCCAGTTTGGGTTTTGGGGCATTGGTCTCTCCTGGTAGGGAGGTCTCAACTGGCCCCCAGGTAATACAGCGCGATCCCCATCGCTGTCAAAGCTGTGGGGCATATGCAAATATATATTGCAACATATTGCTTGGATCAGGCCAGTGGCAATGTGTTATATGTCGAAAACTGAATGCAAGTGATGGTGAGTACATTGCACATAGCAAAGAAGATCTTCACAGATTTCCAGAACTATCTTCACCAATGGTTGACTTTGTTCAAACTGGGACCAAGCGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCACCAGTAGTTCTTGTAATAGATGAATGTCTAGATGAACCTCACTTACAGCATCTTCAGAGCTCTTTGCATGCATTTGTTGATTCTCTCCCTCCAACAACAAGATTAGGAATTATACTATATGGCCGTACCGTGTCGGTGTACGACTTTTTAGAAGAATCAGTTGCATCTGCTGATGTGCTTCCTGGGGACAAGTCACCAAGTGAAGATTCTCTGAAGGCTTTGCTTTATGGTACAGGTATATATTTGTCACCAATGCATGCTTCACTGGCTGTAGCGCATTCCATATTTTCATCATTGACGCCGTATAAGTTGAACGTACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATCTGTCTCGAGGGGTTGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTATGGGCCTGGATCTGTTCCTCATTCTTTTAACCACCCTAATTATCCGTATATGGAAAAGACAGCATTGAAATGGATGGAGAATTTAGGTCGCGAGGCTCATCGACACAATATATTGGTTGATATATTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTAAATCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGAGAAGCCTTTGGCGTTAATTTACAAAGGGCGTCTGCCAGATCAGCAGGCTCCCACGGATTGTTAGAACTGCGCACATCCGACGATATTCTCATCACTCAAGTTGTGGGTCCAGGGGAAGAGTCTCATGTAGACACCCATGAAACATTTAAAAACGACGCCGCTCTTTATATTCAAATGCTAAGTGTTGAAGAGACACAGAGCTTCGCTCTCTCTATGGAAACCAAAGGAGACATCAAAAGTGATTTTGTCTTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTACCAGGCTGATGTCTCAAGGGTCGTTACTGTTAGATTGCCTACAGTAGATAGTGTTTCGGGATATCTTGAAAGTGTTCAGGATGAAGTGGCTGCTGTGCTCATTGCAAAGAGAACTCTGTTACGAGCCAAGAACCATTCAGTGGCTGTTGATATGCGGGTAACAATAGATGAAAGAATCAAGGATATTGGTCTAAAATTTGGCTCCCAATTACCCAAATCAAAACTTCATTGTTTCCCAAAGGAGCTTTCTCTCTTACCGGAGCTCCTTTTCCATCTCAGGAGAGGGCCACTATTGGGATGCATTATTGGCCATGAAGATGAGAGGTCCGTGCTGAGGAACCTATTTCTAAATGCATCTTTTGATCTATCTCTCAGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTTGCCATGCAGTCTGATACTGCTGTTGTACTTGACCATGGAACTGATGTCTTCATTTGGCTGGGTGCTGAACTTGTAGCCGATGAAGGAAAAAGTGCTTCTGCTTTGGCTGCATGCAGGACATTGGCTGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTCAAGGAGGGTAGCTCGCAGGCTCGATATTTTGTCCCACGTCTCATACCAGCTCACAAGGATCCTCCTTATGAGCAGGAGGCAAGGTTCCCACAACTTAGGACGTTAACATCAGAACAGAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTCGACGATCCAAGTTTCTGTGAATGGATGCGAAGTTTGAAGGTCGTACCACCTCAACCGAGTTGA
Protein sequence

>Msa1127550

MANNPTQPNVGFIPSNPEQKQTPIPIHPPPPPPSTSILAPPPRFPPPILQLQKDQTSSANGSPVPHLSTPPGPPVFTSPVRPAAIPFRTSPASPQPPARSSASSLPTSSPPRYSNGSFDLQSQVSGGLEDHIPNGESSFVLKQKKQANVPSLGFGALVSPGREVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNASDGEYIAHSKEDLHRFPELSSPMVDFVQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFLEESVASADVLPGDKSPSEDSLKALLYGTGIYLSPMHASLAVAHSIFSSLTPYKLNVPEASRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRHNILVDILCAGTCPVRVPILNPLAKASGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDAALYIQMLSVEETQSFALSMETKGDIKSDFVFFQFAIQYSNVYQADVSRVVTVRLPTVDSVSGYLESVQDEVAAVLIAKRTLLRAKNHSVAVDMRVTIDERIKDIGLKFGSQLPKSKLHCFPKELSLLPELLFHLRRGPLLGCIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDVFIWLGAELVADEGKSASALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVPRLIPAHKDPPYEQEARFPQLRTLTSEQRTKLKSSFVHFDDPSFCEWMRSLKVVPPQPS*