AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127600 MtrunA17_Chr7g0270801 98.374 861 7 1 1 854 1 861 0.0 1726
Msa1127600 MtrunA17_Chr3g0122081 23.088 706 437 21 175 801 56 734 6.46e-32 133
Msa1127600 MtrunA17_Chr8g0338351 21.662 734 470 22 155 814 36 738 1.45e-30 129
Msa1127600 MtrunA17_Chr1g0206271 21.637 684 449 18 178 801 55 711 1.12e-18 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127600 AT4G01810.3 76.559 866 165 9 16 853 24 879 0.0 1328
Msa1127600 AT4G01810.1 76.559 866 165 9 16 853 24 879 0.0 1328
Msa1127600 AT4G01810.2 76.559 866 165 9 16 853 24 879 0.0 1328
Msa1127600 AT2G21630.1 21.909 744 483 20 140 811 22 739 5.71e-28 121
Msa1127600 AT3G23660.1 22.897 725 470 21 144 801 26 728 1.16e-27 120
Msa1127600 AT4G14160.2 22.461 699 445 21 175 801 62 735 1.42e-27 120
Msa1127600 AT4G14160.1 22.857 700 442 22 175 801 62 736 2.95e-27 119
Msa1127600 AT3G23660.2 22.667 750 467 23 144 801 26 754 1.26e-25 114
Msa1127600 AT5G43670.1 22.452 726 453 21 171 801 49 759 2.16e-22 103
Msa1127600 AT4G14160.3 22.662 556 351 17 175 672 62 596 2.99e-20 96.3

Find 262 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTGAAGGCTTTGCTTTA+TGG 0.139676 7_3:-79229051 Msa1127600:CDS
TTAATTTATAAAACCTTAAA+AGG 0.163203 7_3:-79225910 Msa1127600:three_prime_UTR
AAGGATATTGGTCTAAAATT+TGG 0.164264 7_3:-79228109 Msa1127600:CDS
GACTTACAGTCACAAGTTTC+TGG 0.167719 7_3:-79230033 Msa1127600:CDS
CCACTATTGGGATGCATTAT+TGG 0.182224 7_3:-79228001 Msa1127600:CDS
GCATCTGCTGATGTGCTTCC+TGG 0.200862 7_3:-79229096 Msa1127600:CDS
CAAAAGATGCATTTAGAAAT+AGG 0.208765 7_3:+79227948 None:intergenic
GGTTGCTCTTGCTATAATTC+AGG 0.239657 7_3:-79228899 Msa1127600:CDS
TTTAAGATAGGAACTCTTAC+AGG 0.250263 7_3:+79228646 None:intergenic
GCCGGTGGACCGAACACTTA+TGG 0.263379 7_3:-79228808 Msa1127600:CDS
TTGAAATGGATGGAGAATTT+AGG 0.277803 7_3:-79228724 Msa1127600:CDS
ATGGTTGACTTTGTTCAAAC+TGG 0.284715 7_3:-79229330 Msa1127600:CDS
TCTTTCTGTAATTGTAATAT+TGG 0.289656 7_3:+79230249 None:intergenic
CGGCGTCAATGATGAAAATA+TGG 0.290989 7_3:+79228978 None:intergenic
CCTACAGTAGATAGTGTTTC+GGG 0.298307 7_3:-79228250 Msa1127600:CDS
AACTACTGGTGCAGACATTC+TGG 0.301882 7_3:+79229272 None:intergenic
CCACCCTAATTATCCGTATA+TGG 0.302828 7_3:-79228758 Msa1127600:CDS
CAATGCCCCAAAACCCAAAC+TGG 0.316290 7_3:+79229572 None:intergenic
TTGGTTCTTCATGATGATTT+TGG 0.319030 7_3:-79228595 Msa1127600:CDS
ACAAGCAAATGTACCCAGTT+TGG 0.324194 7_3:-79229586 Msa1127600:CDS
TTTCCATATACGGATAATTA+GGG 0.335818 7_3:+79228755 None:intergenic
CATCTGCTGATGTGCTTCCT+GGG 0.336370 7_3:-79229095 Msa1127600:CDS
TCTGGTACGTTCAACTTATA+CGG 0.339293 7_3:+79228958 None:intergenic
AAAAGCATCAGGTGGAGTTT+TGG 0.348973 7_3:-79228614 Msa1127600:CDS
ACAGAGCTTCGCTCTCTCTA+TGG 0.349880 7_3:-79228377 Msa1127600:CDS
GGGGATCGCGCTGTATTACC+TGG 0.351569 7_3:+79229517 None:intergenic
AATGTACCCAGTTTGGGTTT+TGG 0.352094 7_3:-79229579 Msa1127600:CDS
GCCTACAGTAGATAGTGTTT+CGG 0.357522 7_3:-79228251 Msa1127600:CDS
AAAGGAGCTTTCTCTCTTAC+CGG 0.359772 7_3:-79228050 Msa1127600:CDS
CAAGCAAATGTACCCAGTTT+GGG 0.360268 7_3:-79229585 Msa1127600:CDS
TCTCAGGAGAGGGCCACTAT+TGG 0.360541 7_3:-79228014 Msa1127600:CDS
CTAGTTGAAGGAGGAGGAGG+AGG 0.361462 7_3:+79230303 None:intergenic
GGGATATCTTGAAAGTGTTC+AGG 0.362371 7_3:-79228230 Msa1127600:CDS
ACAAGTTTCTGGTGGCTTAG+AGG 0.363880 7_3:-79230022 Msa1127600:CDS
TATAAAACCTTAAAAGGTCT+TGG 0.372507 7_3:-79225904 Msa1127600:three_prime_UTR
CACCGATCTCTGGAAGCTTC+TGG 0.373407 7_3:+79228940 None:intergenic
AACAGCCACTGAATGGTTCT+TGG 0.376140 7_3:+79228162 None:intergenic
TCCGTGGGAGCCTGCTGATC+TGG 0.377406 7_3:+79228537 None:intergenic
ATGTTATCATAGAGCAATAA+AGG 0.382055 7_3:-79225668 Msa1127600:three_prime_UTR
CGCATCCATTCACAGAAACT+TGG 0.382554 7_3:+79226003 None:intergenic
GATGGGATGAACCCAACATT+AGG 0.384059 7_3:+79230366 None:intergenic
ATAATTCCTAATCTTGTTGT+TGG 0.386425 7_3:+79229168 None:intergenic
GTCACCAATGCATGCTTCAC+TGG 0.387009 7_3:-79229013 Msa1127600:CDS
TTGAATACTGAATTGCAAAC+TGG 0.388045 7_3:+79228317 None:intergenic
ATCACTCAAGTTGTGGGTCC+AGG 0.390955 7_3:-79228481 Msa1127600:CDS
AGTTCCTAGGCACCGATCTC+TGG 0.396441 7_3:+79228930 None:intergenic
GGTAAGAGAGAAAGCTCCTT+TGG 0.396517 7_3:+79228052 None:intergenic
GACATTCTGGAATCTGAAAC+TGG 0.397143 7_3:+79229285 None:intergenic
AGATTAGGAATTATACTATA+TGG 0.397844 7_3:-79229159 Msa1127600:CDS
TCCTCGTATCCTTGCATTCA+AGG 0.399565 7_3:-79226349 Msa1127600:intron
GATGAAAGAATCAAGGATAT+TGG 0.400096 7_3:-79228121 Msa1127600:CDS
CCGGTGGACCGAACACTTAT+GGG 0.402191 7_3:-79228807 Msa1127600:CDS
TTTGCAAGAGGATTTAAGAT+AGG 0.402810 7_3:+79228634 None:intergenic
ACCATTGGTGAAGATAGTTC+TGG 0.403758 7_3:+79229348 None:intergenic
GGGCATTGGTCTCTCCTGGT+AGG 0.404383 7_3:-79229557 Msa1127600:CDS
ATGGAACTGATGTCTTCATT+TGG 0.415608 7_3:-79227808 Msa1127600:CDS
TTTGGGGCATTGGTCTCTCC+TGG 0.416619 7_3:-79229561 Msa1127600:CDS
ACAAAGGATGACTCTCCATT+TGG 0.416965 7_3:+79229991 None:intergenic
CGAGGGGTTGTCAAAAGGTC+AGG 0.419375 7_3:-79228856 Msa1127600:CDS
TCAAAAGTGAACAAAATGAA+TGG 0.421037 7_3:+79225792 None:intergenic
GCACGGACCTCTCATCTTCA+TGG 0.423564 7_3:+79227978 None:intergenic
CTCCCTCCAACAACAAGATT+AGG 0.425059 7_3:-79229174 Msa1127600:CDS
GTGTTGTTTACCTGCTCATA+AGG 0.426814 7_3:+79226179 None:intergenic
AAGGCTTTGCTTTATGGTAC+AGG 0.428062 7_3:-79229045 Msa1127600:CDS
GTCTTCTGCATTAGGTGATT+CGG 0.428515 7_3:-79225937 Msa1127600:three_prime_UTR
TGGAAAAGACAGCATTGAAA+TGG 0.428902 7_3:-79228738 Msa1127600:CDS
TTCTGTAATTGTAATATTGG+TGG 0.430203 7_3:+79230252 None:intergenic
ACGATCCAAGTTTCTGTGAA+TGG 0.430684 7_3:-79226008 Msa1127600:CDS
GGCTCATCGACACAATATAT+TGG 0.432834 7_3:-79228695 Msa1127600:CDS
TGCAACATATTGCTTGGATC+AGG 0.433218 7_3:-79229456 Msa1127600:CDS
AGTTGAAGGAGGAGGAGGAG+GGG 0.435958 7_3:+79230305 None:intergenic
GGGGTACTCAAGTGAGGAAC+TGG 0.436654 7_3:+79230201 None:intergenic
GACCGGTAGTCTTCTGCATT+AGG 0.439897 7_3:-79225945 Msa1127600:three_prime_UTR
GAGGAACGAGCCGGCGGCTG+AGG 0.441389 7_3:+79230108 None:intergenic
TAGTTGAAGGAGGAGGAGGA+GGG 0.442572 7_3:+79230304 None:intergenic
GGAATGGCAGCTGGACGGAC+AGG 0.443534 7_3:+79230153 None:intergenic
CTCCTCGTTGTCTAATGCAC+AGG 0.443595 7_3:-79227904 Msa1127600:CDS
CCTCTTTAGTCATTGTCTCA+TGG 0.445505 7_3:-79225594 Msa1127600:three_prime_UTR
AATATTGGTGGAGGAAATCT+AGG 0.445589 7_3:+79230264 None:intergenic
CCAATAATGCATCCCAATAG+TGG 0.447762 7_3:+79228001 None:intergenic
GTTGCTCTTGCTATAATTCA+GGG 0.450113 7_3:-79228898 Msa1127600:CDS
CAAAAGTGAACAAAATGAAT+GGG 0.450629 7_3:+79225793 None:intergenic
TTGTCTAATGCACAGGGAGG+GGG 0.451959 7_3:-79227897 Msa1127600:CDS
ACAAAACATGCAAACAAACT+TGG 0.453073 7_3:+79225876 None:intergenic
TCGCCACCACGTTACTCAAA+TGG 0.453714 7_3:-79230063 Msa1127600:CDS
AGGGCGTCTGCCAGATCAGC+AGG 0.454933 7_3:-79228547 Msa1127600:CDS
CCCATAAGTGTTCGGTCCAC+CGG 0.456496 7_3:+79228807 None:intergenic
ACCCAACATTAGGTTGTGTT+GGG 0.461867 7_3:+79230376 None:intergenic
GTAAGAGAGAAAGCTCCTTT+GGG 0.462126 7_3:+79228053 None:intergenic
ACCCAACACAACCTAATGTT+GGG 0.462638 7_3:-79230377 Msa1127600:CDS
TCACTTGGTGACTTGTCCCC+AGG 0.464133 7_3:+79229078 None:intergenic
ATATATTGCAACATATTGCT+TGG 0.465612 7_3:-79229462 Msa1127600:CDS
CTAAAGAGGTAAGGGAAGAA+TGG 0.469518 7_3:+79225608 None:intergenic
AATCCTCTTGCAAAAGCATC+AGG 0.471518 7_3:-79228625 Msa1127600:CDS
GCCGGCGGCTGAGGCGAAGC+GGG 0.473144 7_3:+79230117 None:intergenic
AACTGATGTCTTCATTTGGC+TGG 0.475952 7_3:-79227804 Msa1127600:intron
GGCATTGGTCTCTCCTGGTA+GGG 0.478728 7_3:-79229556 Msa1127600:CDS
TAAAGAGGTAAGGGAAGAAT+GGG 0.480887 7_3:+79225609 None:intergenic
GGACCGAACACTTATGGGCC+TGG 0.482136 7_3:-79228802 Msa1127600:CDS
TGTAATTGTAATATTGGTGG+AGG 0.482734 7_3:+79230255 None:intergenic
TTTGGCTGCATGCAGGACAT+TGG 0.483530 7_3:-79226403 Msa1127600:CDS
AACCCAACATTAGGTTGTGT+TGG 0.484804 7_3:+79230375 None:intergenic
ATACTAGTTGAAGGAGGAGG+AGG 0.484811 7_3:+79230300 None:intergenic
CCTCACTTGAGTACCCCTCC+TGG 0.485475 7_3:-79230195 Msa1127600:CDS
AACCCAACACAACCTAATGT+TGG 0.487252 7_3:-79230378 Msa1127600:CDS
CTTCTGCTTTGGCTGCATGC+AGG 0.488388 7_3:-79226410 Msa1127600:CDS
CGTTGTCTAATGCACAGGGA+GGG 0.490233 7_3:-79227899 Msa1127600:CDS
CCCCATCGCTGTCAAAGCTG+TGG 0.491378 7_3:-79229498 Msa1127600:CDS
ATGTTAACGTCCTAAGTTGT+GGG 0.494007 7_3:+79226073 None:intergenic
AGACAATGACTAAAGAGGTA+AGG 0.494583 7_3:+79225599 None:intergenic
TCTACATGAGACTCTTCCCC+TGG 0.495012 7_3:+79228463 None:intergenic
ATTCCTAATCTTGTTGTTGG+AGG 0.495311 7_3:+79229171 None:intergenic
TTCAGTGGCTGTTGATATGC+GGG 0.499486 7_3:-79228152 Msa1127600:CDS
CAACCTCAACAGCAGTTCCT+AGG 0.500091 7_3:+79228917 None:intergenic
GATGTAAATACAGGAGGTCC+AGG 0.503739 7_3:+79230177 None:intergenic
CCATGAGACAATGACTAAAG+AGG 0.505187 7_3:+79225594 None:intergenic
TTCCTAATCTTGTTGTTGGA+GGG 0.508270 7_3:+79229172 None:intergenic
GGTGCTAAAATACTAGTTGA+AGG 0.508863 7_3:+79230291 None:intergenic
TCATCTATTACAAGAACTAC+TGG 0.509134 7_3:+79229258 None:intergenic
TGGAACAAAACCAGGTCGCT+TGG 0.509710 7_3:+79229305 None:intergenic
GCCCTCTCCTGAGATGGAAA+AGG 0.510725 7_3:+79228023 None:intergenic
CCAGTTGAGACCTCCCTACC+AGG 0.512854 7_3:+79229543 None:intergenic
GTTGTCTAATGCACAGGGAG+GGG 0.514617 7_3:-79227898 Msa1127600:CDS
CCCATCGCTGTCAAAGCTGT+GGG 0.516182 7_3:-79229497 Msa1127600:CDS
AGTCATTGTCTCATGGAAAG+TGG 0.517302 7_3:-79225587 Msa1127600:three_prime_UTR
AAAGAATGAGGAACAGATCC+AGG 0.517901 7_3:+79228784 None:intergenic
AACAATAGATGAAAGAATCA+AGG 0.519486 7_3:-79228128 Msa1127600:CDS
TGTCTCGAGGGGTTGTCAAA+AGG 0.519625 7_3:-79228861 Msa1127600:CDS
CCCCACAGCTTTGACAGCGA+TGG 0.520772 7_3:+79229496 None:intergenic
ATTGGTCTCTCCTGGTAGGG+AGG 0.521739 7_3:-79229553 Msa1127600:CDS
CCCACAGCTTTGACAGCGAT+GGG 0.523958 7_3:+79229497 None:intergenic
CAAGGATCCTCCTTATGAGC+AGG 0.524003 7_3:-79226189 Msa1127600:intron
TCACTCAAGTTGTGGGTCCA+GGG 0.527829 7_3:-79228480 Msa1127600:CDS
TCCAGAACTATCTTCACCAA+TGG 0.527850 7_3:-79229349 Msa1127600:CDS
GCCTTCAGAGAATCTTCACT+TGG 0.528830 7_3:+79229063 None:intergenic
TATTCTCATCACTCAAGTTG+TGG 0.529391 7_3:-79228488 Msa1127600:CDS
TTGGTTGATATATTATGTGC+TGG 0.530155 7_3:-79228676 Msa1127600:CDS
TTAGAGGATCATATTCCAAA+TGG 0.531231 7_3:-79230006 Msa1127600:CDS
GCCAGATCAGCAGGCTCCCA+CGG 0.532333 7_3:-79228538 Msa1127600:CDS
GACATATAACACATTGCCAC+TGG 0.532814 7_3:+79229433 None:intergenic
GCTGAACTTGTAGCCGATGA+AGG 0.532973 7_3:-79226441 Msa1127600:CDS
ACCGGTCATCAACTCGGTTG+AGG 0.534312 7_3:+79225961 None:intergenic
CGGACAGGAGATGTAAATAC+AGG 0.535127 7_3:+79230168 None:intergenic
ATTCTCATCACTCAAGTTGT+GGG 0.536006 7_3:-79228487 Msa1127600:CDS
GTGAGGAACTGGACTGCCAT+TGG 0.536352 7_3:+79230212 None:intergenic
CATCTGCTGATCTGTCTCGA+GGG 0.536757 7_3:-79228873 Msa1127600:CDS
GTTCGAAAAGGAATGGCAGC+TGG 0.537523 7_3:+79230144 None:intergenic
CTTTGGCGTTAATTTACAAA+GGG 0.539608 7_3:-79228566 Msa1127600:CDS
TGGTTGACTTTGTTCAAACT+GGG 0.540753 7_3:-79229329 Msa1127600:CDS
GATCCAGGCCCATAAGTGTT+CGG 0.541419 7_3:+79228799 None:intergenic
AGGCAAGGTTCCCACAACTT+AGG 0.541674 7_3:-79226083 Msa1127600:CDS
CACCTAATGCAGAAGACTAC+CGG 0.544525 7_3:+79225943 None:intergenic
CCATCTGCTGATCTGTCTCG+AGG 0.546084 7_3:-79228874 Msa1127600:CDS
GGGATCGCGCTGTATTACCT+GGG 0.546622 7_3:+79229518 None:intergenic
AAAGACAGCATTGAAATGGA+TGG 0.546652 7_3:-79228734 Msa1127600:CDS
TGTACCAGGCTGATGTCTCA+AGG 0.547620 7_3:-79228291 Msa1127600:CDS
GGATACGAGGAGCTGGAAAA+CGG 0.547993 7_3:+79226361 None:intergenic
AAAACAGGAGGGTAGCTCGC+AGG 0.549688 7_3:-79226246 Msa1127600:intron
GAAAACTGACCTTGAATGCA+AGG 0.551532 7_3:+79226340 None:intergenic
CTGAGATGGAAAAGGAGCTC+CGG 0.552188 7_3:+79228031 None:intergenic
AGTCGTACACCGACACGGTA+CGG 0.552372 7_3:+79229136 None:intergenic
TACCAGAAGCTTCCAGAGAT+CGG 0.552628 7_3:-79228942 Msa1127600:CDS
TGATCTATCTCTCAGAATGG+TGG 0.553190 7_3:-79227927 Msa1127600:CDS
GCATATCAACAGCCACTGAA+TGG 0.553857 7_3:+79228155 None:intergenic
AGTAGAATTATTGTCTGTGC+CGG 0.554452 7_3:-79228826 Msa1127600:CDS
AAAACTTCATTGTTTCCCAA+AGG 0.556109 7_3:-79228068 Msa1127600:CDS
GCTTCCAGAGATCGGTGCCT+AGG 0.556110 7_3:-79228934 Msa1127600:CDS
ATAGTGGCCCTCTCCTGAGA+TGG 0.556546 7_3:+79228017 None:intergenic
GAAGAGGCTGAGGAACGAGC+CGG 0.557105 7_3:+79230099 None:intergenic
AATGCAAGGATACGAGGAGC+TGG 0.557311 7_3:+79226354 None:intergenic
GATGTTAACGTCCTAAGTTG+TGG 0.558972 7_3:+79226072 None:intergenic
TAGAAATAGGTTCCTCAGCA+CGG 0.559759 7_3:+79227961 None:intergenic
CACTCAAGTTGTGGGTCCAG+GGG 0.560885 7_3:-79228479 Msa1127600:CDS
ACCTCAACCGAGTTGATGAC+CGG 0.561827 7_3:-79225962 Msa1127600:exon
ACTATATGGCCGTACCGTGT+CGG 0.562058 7_3:-79229145 Msa1127600:CDS
GACAATGACTAAAGAGGTAA+GGG 0.563003 7_3:+79225600 None:intergenic
CCTTTGTAAATTAACGCCAA+AGG 0.566259 7_3:+79228567 None:intergenic
AGAATTATTGTCTGTGCCGG+TGG 0.566565 7_3:-79228823 Msa1127600:CDS
GTTTGAACAAAGTCAACCAT+TGG 0.567196 7_3:+79229333 None:intergenic
TAAGGAGGATCCTTGTGAGC+TGG 0.568588 7_3:+79226197 None:intergenic
TGAATGGATGCGAAGTTTGA+AGG 0.569935 7_3:-79225992 Msa1127600:CDS
TGTCTAATGCACAGGGAGGG+GGG 0.572598 7_3:-79227896 Msa1127600:CDS
CTCGAGACAGATCAGCAGAT+GGG 0.572727 7_3:+79228875 None:intergenic
TCAGTATTCAAATGTGTACC+AGG 0.573423 7_3:-79228305 Msa1127600:CDS
TGCGCAGTTCTAACAATCCG+TGG 0.573517 7_3:+79228521 None:intergenic
ACCTTGAATGCAAGGATACG+AGG 0.575322 7_3:+79226348 None:intergenic
TTCTGCATTAGGTGATTCGG+TGG 0.575553 7_3:-79225934 Msa1127600:three_prime_UTR
AGCCGGCGGCTGAGGCGAAG+CGG 0.575683 7_3:+79230116 None:intergenic
AAAATACTAGTTGAAGGAGG+AGG 0.575861 7_3:+79230297 None:intergenic
GTGAACAAAATGAATGGGAG+AGG 0.576503 7_3:+79225798 None:intergenic
CCTTTGGCGTTAATTTACAA+AGG 0.578294 7_3:-79228567 Msa1127600:CDS
TAACGTGGTGGCGACGAGGT+TGG 0.579731 7_3:+79230072 None:intergenic
TTAGGGTGGTTAAAAGAATG+AGG 0.583364 7_3:+79228772 None:intergenic
CAAACTGGGACCAAGCGACC+TGG 0.585466 7_3:-79229315 Msa1127600:CDS
AGGAGCTGGAAAACGGAACT+CGG 0.585658 7_3:+79226368 None:intergenic
AAATGAAGACATCAGTTCCA+TGG 0.585675 7_3:+79227810 None:intergenic
GTGCCTAGGAACTGCTGTTG+AGG 0.588652 7_3:-79228920 Msa1127600:CDS
CCATATACGGATAATTAGGG+TGG 0.590910 7_3:+79228758 None:intergenic
ACGTCTCATACCAGCTCACA+AGG 0.591329 7_3:-79226207 Msa1127600:CDS
CGACGAGGTTGGCAAAGAAG+AGG 0.593237 7_3:+79230083 None:intergenic
ACAGCCAGTGAAGCATGCAT+TGG 0.593600 7_3:+79229009 None:intergenic
ACCAAGTGAAGATTCTCTGA+AGG 0.595515 7_3:-79229064 Msa1127600:CDS
AACTTGTGACTGTAAGTCAA+AGG 0.596093 7_3:+79230038 None:intergenic
GAGGGGTTGTCAAAAGGTCA+GGG 0.596155 7_3:-79228855 Msa1127600:CDS
AACAGCAGTATCAGACTGCA+TGG 0.601478 7_3:+79227841 None:intergenic
CTCTGAAGATGCTGTAAGTG+AGG 0.601963 7_3:+79229222 None:intergenic
GAAGCGGGTGAAGTTCGAAA+AGG 0.603900 7_3:+79230132 None:intergenic
TTGTTTACCTGCTCATAAGG+AGG 0.608131 7_3:+79226182 None:intergenic
ATCTGCTGATGTGCTTCCTG+GGG 0.608232 7_3:-79229094 Msa1127600:CDS
ATTCAGTGGCTGTTGATATG+CGG 0.608901 7_3:-79228153 Msa1127600:CDS
TTGAGTGATGAGAATATCGT+CGG 0.609074 7_3:+79228495 None:intergenic
CCTCGAGACAGATCAGCAGA+TGG 0.609962 7_3:+79228874 None:intergenic
GGGTGAAGTTCGAAAAGGAA+TGG 0.611406 7_3:+79230137 None:intergenic
GGTTGGCAAAGAAGAGGCTG+AGG 0.612080 7_3:+79230089 None:intergenic
GGATCGCGCTGTATTACCTG+GGG 0.612217 7_3:+79229519 None:intergenic
TCCTCGTTGTCTAATGCACA+GGG 0.614480 7_3:-79227903 Msa1127600:CDS
ATCTGCTGATCTGTCTCGAG+GGG 0.616232 7_3:-79228872 Msa1127600:CDS
AAGACTACCGGTCATCAACT+CGG 0.617722 7_3:+79225955 None:intergenic
TGAGTAACGTGGTGGCGACG+AGG 0.621614 7_3:+79230068 None:intergenic
TTAAGATAGGAACTCTTACA+GGG 0.623544 7_3:+79228647 None:intergenic
TTACAGTCACAAGTTTCTGG+TGG 0.623640 7_3:-79230030 Msa1127600:CDS
TGCATGGCAAGATCATAAGC+CGG 0.625214 7_3:+79227857 None:intergenic
GAGGCTGAGGAACGAGCCGG+CGG 0.625710 7_3:+79230102 None:intergenic
GAAAAGGAATGGCAGCTGGA+CGG 0.630753 7_3:+79230148 None:intergenic
TAAATACAGGAGGTCCAGGA+GGG 0.633212 7_3:+79230181 None:intergenic
GATCAAACTTCATCTGCCAA+TGG 0.633558 7_3:-79230228 Msa1127600:CDS
CCCGAAACACTATCTACTGT+AGG 0.633775 7_3:+79228250 None:intergenic
AAGATGAGAGGTCCGTGCTG+AGG 0.633786 7_3:-79227973 Msa1127600:CDS
CCTCTTGCAAAAGCATCAGG+TGG 0.634824 7_3:-79228622 Msa1127600:CDS
TGAAAGTGTTCAGGATGAAG+TGG 0.642203 7_3:-79228221 Msa1127600:CDS
ACTGCTGTTGTACTTGACCA+TGG 0.642492 7_3:-79227827 Msa1127600:CDS
TCTGAAACTGGAACAAAACC+AGG 0.643903 7_3:+79229297 None:intergenic
GGTGGAGGAAATCTAGGTGG+TGG 0.646706 7_3:+79230270 None:intergenic
GTACCAGGCTGATGTCTCAA+GGG 0.647899 7_3:-79228290 Msa1127600:CDS
GCTAAAATACTAGTTGAAGG+AGG 0.651512 7_3:+79230294 None:intergenic
GGTCATCAACTCGGTTGAGG+TGG 0.652167 7_3:+79225964 None:intergenic
TAGCATTTGAATATAAAGAG+CGG 0.653919 7_3:+79228414 None:intergenic
GCGCAGTTCTAACAATCCGT+GGG 0.656494 7_3:+79228522 None:intergenic
CGAAAACTGAATGCAAGTGA+TGG 0.657106 7_3:-79229411 Msa1127600:CDS
AATGCCCCAAAACCCAAACT+GGG 0.659386 7_3:+79229573 None:intergenic
CGACCCTTGAGACATCAGCC+TGG 0.660436 7_3:+79228287 None:intergenic
GTAAATACAGGAGGTCCAGG+AGG 0.661317 7_3:+79230180 None:intergenic
TCGTTGTCTAATGCACAGGG+AGG 0.663454 7_3:-79227900 Msa1127600:CDS
TTATTGGCCATGAAGATGAG+AGG 0.665625 7_3:-79227985 Msa1127600:CDS
TTGTGAGCTGGTATGAGACG+TGG 0.668618 7_3:+79226209 None:intergenic
CCAGGAGGGGTACTCAAGTG+AGG 0.670383 7_3:+79230195 None:intergenic
GCTCTCTCTATGGAAACCAA+AGG 0.671019 7_3:-79228367 Msa1127600:CDS
TATTGCTTGGATCAGGCCAG+TGG 0.671309 7_3:-79229449 Msa1127600:CDS
CCACAGCTTTGACAGCGATG+GGG 0.674421 7_3:+79229498 None:intergenic
GATGGAGAATTTAGGTCGCG+AGG 0.676010 7_3:-79228716 Msa1127600:CDS
AAATACAGGAGGTCCAGGAG+GGG 0.683733 7_3:+79230182 None:intergenic
GGGGTTGTCAAAAGGTCAGG+GGG 0.691190 7_3:-79228853 Msa1127600:CDS
ATTGGTGGAGGAAATCTAGG+TGG 0.691906 7_3:+79230267 None:intergenic
AGGGGTTGTCAAAAGGTCAG+GGG 0.692424 7_3:-79228854 Msa1127600:CDS
ACGAGCCAAGAACCATTCAG+TGG 0.695755 7_3:-79228167 Msa1127600:CDS
ACAGGAGATGTAAATACAGG+AGG 0.703342 7_3:+79230171 None:intergenic
GATCCATTTGAGTAACGTGG+TGG 0.707026 7_3:+79230060 None:intergenic
CCATCGCTGTCAAAGCTGTG+GGG 0.707531 7_3:-79229496 Msa1127600:CDS
AAGGATCCATTTGAGTAACG+TGG 0.710338 7_3:+79230057 None:intergenic
TGTGAGCTGGTATGAGACGT+GGG 0.714877 7_3:+79226210 None:intergenic
GATCGCGCTGTATTACCTGG+GGG 0.731713 7_3:+79229520 None:intergenic
TCCCTGTGCATTAGACAACG+AGG 0.756815 7_3:+79227902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAAAAAATATAATT+TGG + chr7_3:79226296-79226315 None:intergenic 0.0%
!! TTAATTTATAAAACCTTAAA+AGG - chr7_3:79230060-79230079 Msa1127600:CDS 10.0%
!!! AAATGTAGTATAATTGATTT+AGG + chr7_3:79228301-79228320 None:intergenic 15.0%
!!! AAAATTGTTGCATTTTATTT+TGG - chr7_3:79228649-79228668 Msa1127600:CDS 15.0%
!! AAACAAAACAACAAATTTAT+AGG + chr7_3:79228730-79228749 None:intergenic 15.0%
!! ATGTATATACAAAAGTTTAT+AGG + chr7_3:79229180-79229199 None:intergenic 15.0%
!! GTAAAATTATAATTAAAACC+AGG - chr7_3:79229314-79229333 Msa1127600:CDS 15.0%
!!! TTTTTCTTTTTTCTTTTTTG+AGG - chr7_3:79230257-79230276 Msa1127600:CDS 15.0%
!! TCTTTCTGTAATTGTAATAT+TGG + chr7_3:79225724-79225743 None:intergenic 20.0%
!! ATAAAAACTATAAACTACTC+CGG + chr7_3:79226175-79226194 None:intergenic 20.0%
!!! ATTCTTTTCATTTGATAAGT+AGG - chr7_3:79226345-79226364 Msa1127600:intron 20.0%
!! AGATTAGGAATTATACTATA+TGG - chr7_3:79226811-79226830 Msa1127600:intron 20.0%
!!! AAACAATGAAGTTTTGATTT+GGG + chr7_3:79227897-79227916 None:intergenic 20.0%
!!! ATAAAATGCAACAATTTTGT+TGG + chr7_3:79228647-79228666 None:intergenic 20.0%
!!! AAAAAAAAAACTTGTTCTGA+TGG - chr7_3:79228832-79228851 Msa1127600:CDS 20.0%
!!! CTGTAATTTTTCTTCTTTAT+CGG - chr7_3:79228889-79228908 Msa1127600:CDS 20.0%
!! ATTTGCCTAAATTACATATT+TGG - chr7_3:79228979-79228998 Msa1127600:CDS 20.0%
!! AAAGTCCAAATATGTAATTT+AGG + chr7_3:79228987-79229006 None:intergenic 20.0%
!! TATATACAAAAGTTTATAGG+AGG + chr7_3:79229177-79229196 None:intergenic 20.0%
!! AGAGAAAGAAACTAAAAATA+TGG + chr7_3:79229421-79229440 None:intergenic 20.0%
!! AAACAAACAGAACAAAAATA+TGG + chr7_3:79229456-79229475 None:intergenic 20.0%
!!! CTGAATTTACATTTTAAAAC+AGG - chr7_3:79229709-79229728 Msa1127600:intron 20.0%
!!! AATTTACATTTTAAAACAGG+AGG - chr7_3:79229712-79229731 Msa1127600:intron 20.0%
!!! ATTTACATTTTAAAACAGGA+GGG - chr7_3:79229713-79229732 Msa1127600:intron 20.0%
!!! TTATTTAGAACAAACACATT+TGG + chr7_3:79229847-79229866 None:intergenic 20.0%
!!! TAAATTACTTATTTTTGTGC+AGG - chr7_3:79229864-79229883 Msa1127600:intron 20.0%
! TTCTGTAATTGTAATATTGG+TGG + chr7_3:79225721-79225740 None:intergenic 25.0%
! TCAATGTAAGATAATTAAGC+AGG + chr7_3:79226030-79226049 None:intergenic 25.0%
! TCAAATAAGTCAATTCAAAC+AGG + chr7_3:79226076-79226095 None:intergenic 25.0%
! ATATATTGCAACATATTGCT+TGG - chr7_3:79226508-79226527 Msa1127600:intron 25.0%
!! ATAATTCCTAATCTTGTTGT+TGG + chr7_3:79226805-79226824 None:intergenic 25.0%
! TTTCCATATACGGATAATTA+GGG + chr7_3:79227218-79227237 None:intergenic 25.0%
!! TTTTCCATATACGGATAATT+AGG + chr7_3:79227219-79227238 None:intergenic 25.0%
!!! GTCGTTTTTAAATGTTTCAT+GGG + chr7_3:79227535-79227554 None:intergenic 25.0%
! TAGCATTTGAATATAAAGAG+CGG + chr7_3:79227559-79227578 None:intergenic 25.0%
! AACAATAGATGAAAGAATCA+AGG - chr7_3:79227842-79227861 Msa1127600:CDS 25.0%
!! AAGGATATTGGTCTAAAATT+TGG - chr7_3:79227861-79227880 Msa1127600:CDS 25.0%
!!! AAGTTTTGATTTGGGTAATT+GGG + chr7_3:79227889-79227908 None:intergenic 25.0%
!!! GAAACAATGAAGTTTTGATT+TGG + chr7_3:79227898-79227917 None:intergenic 25.0%
! CAAAAGATGCATTTAGAAAT+AGG + chr7_3:79228025-79228044 None:intergenic 25.0%
!! CATTTTCTTAGTTGAAGATA+TGG - chr7_3:79228218-79228237 Msa1127600:CDS 25.0%
!!! AGAAAAAAGGTTAGTTTTCA+TGG - chr7_3:79228385-79228404 Msa1127600:CDS 25.0%
! AGAAATGAAGATGAAAAATG+AGG + chr7_3:79228524-79228543 None:intergenic 25.0%
!!! TCTTCTTTTGTTTTTTCCAA+TGG - chr7_3:79228541-79228560 Msa1127600:CDS 25.0%
! ATTATATGCAAAAGAGCAAA+GGG + chr7_3:79228763-79228782 None:intergenic 25.0%
! TATTATATGCAAAAGAGCAA+AGG + chr7_3:79228764-79228783 None:intergenic 25.0%
! ATCTGTAGACTTTAAATACA+AGG + chr7_3:79228945-79228964 None:intergenic 25.0%
! AAGGAAATTGCATGTATATT+GGG + chr7_3:79229482-79229501 None:intergenic 25.0%
! TAAGGAAATTGCATGTATAT+TGG + chr7_3:79229483-79229502 None:intergenic 25.0%
! TGCAATTTCCTTATATGTTA+TGG - chr7_3:79229490-79229509 Msa1127600:CDS 25.0%
! ATTTCCTTATATGTTATGGA+TGG - chr7_3:79229494-79229513 Msa1127600:CDS 25.0%
! AAATCCATCCATAACATATA+AGG + chr7_3:79229501-79229520 None:intergenic 25.0%
! TATAAAACCTTAAAAGGTCT+TGG - chr7_3:79230066-79230085 Msa1127600:CDS 25.0%
! CAAAAGTGAACAAAATGAAT+GGG + chr7_3:79230180-79230199 None:intergenic 25.0%
! TCAAAAGTGAACAAAATGAA+TGG + chr7_3:79230181-79230200 None:intergenic 25.0%
!!! CTTTTGAAAAGCATTCATAA+AGG - chr7_3:79230194-79230213 Msa1127600:CDS 25.0%
! ATGTTATCATAGAGCAATAA+AGG - chr7_3:79230302-79230321 Msa1127600:CDS 25.0%
TGTAATTGTAATATTGGTGG+AGG + chr7_3:79225718-79225737 None:intergenic 30.0%
TTAGAGGATCATATTCCAAA+TGG - chr7_3:79225964-79225983 Msa1127600:exon 30.0%
TAAATACTCGTGAAACTGTT+TGG - chr7_3:79226114-79226133 Msa1127600:intron 30.0%
AAATACTCGTGAAACTGTTT+GGG - chr7_3:79226115-79226134 Msa1127600:intron 30.0%
TCATCTATTACAAGAACTAC+TGG + chr7_3:79226715-79226734 None:intergenic 30.0%
! AATGCTGTCTTTTCCATATA+CGG + chr7_3:79227228-79227247 None:intergenic 30.0%
TTGAAATGGATGGAGAATTT+AGG - chr7_3:79227246-79227265 Msa1127600:intron 30.0%
! TTGGTTGATATATTATGTGC+TGG - chr7_3:79227294-79227313 Msa1127600:intron 30.0%
TTAAGATAGGAACTCTTACA+GGG + chr7_3:79227326-79227345 None:intergenic 30.0%
! TTTAAGATAGGAACTCTTAC+AGG + chr7_3:79227327-79227346 None:intergenic 30.0%
! TTTGCAAGAGGATTTAAGAT+AGG + chr7_3:79227339-79227358 None:intergenic 30.0%
!! TTGGTTCTTCATGATGATTT+TGG - chr7_3:79227375-79227394 Msa1127600:intron 30.0%
CTTTGGCGTTAATTTACAAA+GGG - chr7_3:79227404-79227423 Msa1127600:intron 30.0%
!!! CGTCGTTTTTAAATGTTTCA+TGG + chr7_3:79227536-79227555 None:intergenic 30.0%
TTGAATACTGAATTGCAAAC+TGG + chr7_3:79227656-79227675 None:intergenic 30.0%
GATGAAAGAATCAAGGATAT+TGG - chr7_3:79227849-79227868 Msa1127600:CDS 30.0%
!!! GAAGTTTTGATTTGGGTAAT+TGG + chr7_3:79227890-79227909 None:intergenic 30.0%
AAAACTTCATTGTTTCCCAA+AGG - chr7_3:79227902-79227921 Msa1127600:CDS 30.0%
! TTTTGATCTATCTCTCAGAA+TGG - chr7_3:79228040-79228059 Msa1127600:CDS 30.0%
! ATTGTCCTTTTATGGTTTAG+AGG - chr7_3:79228258-79228277 Msa1127600:CDS 30.0%
! TTGTCCTTTTATGGTTTAGA+GGG - chr7_3:79228259-79228278 Msa1127600:CDS 30.0%
AATACCCTCTAAACCATAAA+AGG + chr7_3:79228266-79228285 None:intergenic 30.0%
!!! TATGGTTTAGAGGGTATTTT+TGG - chr7_3:79228268-79228287 Msa1127600:CDS 30.0%
!!! ATGGTTTAGAGGGTATTTTT+GGG - chr7_3:79228269-79228288 Msa1127600:CDS 30.0%
AAAACAACATGAACAATTGC+TGG + chr7_3:79228333-79228352 None:intergenic 30.0%
TGTAACCTGTGATAGAAAAA+AGG - chr7_3:79228372-79228391 Msa1127600:CDS 30.0%
!!! ACTAACCTTTTTTCTATCAC+AGG + chr7_3:79228380-79228399 None:intergenic 30.0%
!!! AAGGTTAGTTTTCATGGTAA+TGG - chr7_3:79228391-79228410 Msa1127600:CDS 30.0%
! TAATAATGTGCAGTATTGAG+TGG - chr7_3:79228473-79228492 Msa1127600:CDS 30.0%
AGATGAAAAATGAGGAAACA+AGG + chr7_3:79228516-79228535 None:intergenic 30.0%
!!! TGGAGTATTTTTTTTCCTCA+AGG - chr7_3:79228852-79228871 Msa1127600:CDS 30.0%
!!! GGAGTATTTTTTTTCCTCAA+GGG - chr7_3:79228853-79228872 Msa1127600:CDS 30.0%
!!! GAGTATTTTTTTTCCTCAAG+GGG - chr7_3:79228854-79228873 Msa1127600:CDS 30.0%
ACAATATACTGCAATGCAAA+AGG - chr7_3:79229248-79229267 Msa1127600:CDS 30.0%
!! ATGTTATGGATGGATTTTCT+AGG - chr7_3:79229504-79229523 Msa1127600:CDS 30.0%
!! TGTTATGGATGGATTTTCTA+GGG - chr7_3:79229505-79229524 Msa1127600:CDS 30.0%
!!! ATTACTTATTTTTGTGCAGG+AGG - chr7_3:79229867-79229886 Msa1127600:intron 30.0%
ACAAAACATGCAAACAAACT+TGG + chr7_3:79230097-79230116 None:intergenic 30.0%
!! AAGTTTGTTTGCATGTTTTG+TGG - chr7_3:79230096-79230115 Msa1127600:CDS 30.0%
GTCAAAAAAACTCTCAGATT+CGG - chr7_3:79230149-79230168 Msa1127600:CDS 30.0%
!!! TCTTTTTTGAGGATGTTCAT+CGG - chr7_3:79230268-79230287 Msa1127600:CDS 30.0%
!! GTTTTTGTTCTGGGTTTGAT+GGG + chr7_3:79225624-79225643 None:intergenic 35.0%
!! TGTTTTTGTTCTGGGTTTGA+TGG + chr7_3:79225625-79225644 None:intergenic 35.0%
!!! TTGGAGTCTGTTTTTGTTCT+GGG + chr7_3:79225633-79225652 None:intergenic 35.0%
!!! ATTGGAGTCTGTTTTTGTTC+TGG + chr7_3:79225634-79225653 None:intergenic 35.0%
AAAATACTAGTTGAAGGAGG+AGG + chr7_3:79225676-79225695 None:intergenic 35.0%
GCTAAAATACTAGTTGAAGG+AGG + chr7_3:79225679-79225698 None:intergenic 35.0%
GGTGCTAAAATACTAGTTGA+AGG + chr7_3:79225682-79225701 None:intergenic 35.0%
AATATTGGTGGAGGAAATCT+AGG + chr7_3:79225709-79225728 None:intergenic 35.0%
AACTTGTGACTGTAAGTCAA+AGG + chr7_3:79225935-79225954 None:intergenic 35.0%
! ATGAGCTGAGAAAAGTACAA+AGG + chr7_3:79225998-79226017 None:intergenic 35.0%
! TGTACTTTTCTCAGCTCATA+AGG - chr7_3:79225999-79226018 Msa1127600:CDS 35.0%
ATCAGCTGTTTAAGCAAACA+GGG - chr7_3:79226270-79226289 Msa1127600:intron 35.0%
GTTTGAACAAAGTCAACCAT+TGG + chr7_3:79226640-79226659 None:intergenic 35.0%
! ATGGTTGACTTTGTTCAAAC+TGG - chr7_3:79226640-79226659 Msa1127600:intron 35.0%
! TGGTTGACTTTGTTCAAACT+GGG - chr7_3:79226641-79226660 Msa1127600:intron 35.0%
!! TTCCTAATCTTGTTGTTGGA+GGG + chr7_3:79226801-79226820 None:intergenic 35.0%
!! ATTCCTAATCTTGTTGTTGG+AGG + chr7_3:79226802-79226821 None:intergenic 35.0%
TCTGGTACGTTCAACTTATA+CGG + chr7_3:79227015-79227034 None:intergenic 35.0%
! GTTGCTCTTGCTATAATTCA+GGG - chr7_3:79227072-79227091 Msa1127600:intron 35.0%
AGTAGAATTATTGTCTGTGC+CGG - chr7_3:79227144-79227163 Msa1127600:intron 35.0%
TTAGGGTGGTTAAAAGAATG+AGG + chr7_3:79227201-79227220 None:intergenic 35.0%
! TGGAAAAGACAGCATTGAAA+TGG - chr7_3:79227232-79227251 Msa1127600:intron 35.0%
! AAAGACAGCATTGAAATGGA+TGG - chr7_3:79227236-79227255 Msa1127600:intron 35.0%
CCTTTGTAAATTAACGCCAA+AGG + chr7_3:79227406-79227425 None:intergenic 35.0%
CCTTTGGCGTTAATTTACAA+AGG - chr7_3:79227403-79227422 Msa1127600:intron 35.0%
TTGAGTGATGAGAATATCGT+CGG + chr7_3:79227478-79227497 None:intergenic 35.0%
! TATTCTCATCACTCAAGTTG+TGG - chr7_3:79227482-79227501 Msa1127600:intron 35.0%
! ATTCTCATCACTCAAGTTGT+GGG - chr7_3:79227483-79227502 Msa1127600:intron 35.0%
!! ATCACTTTTGATGTCTCCTT+TGG + chr7_3:79227622-79227641 None:intergenic 35.0%
TCAGTATTCAAATGTGTACC+AGG - chr7_3:79227665-79227684 Msa1127600:intron 35.0%
AAATGAAGACATCAGTTCCA+TGG + chr7_3:79228163-79228182 None:intergenic 35.0%
ATGGAACTGATGTCTTCATT+TGG - chr7_3:79228162-79228181 Msa1127600:CDS 35.0%
! TTGCAGTCATTGTCCTTTTA+TGG - chr7_3:79228250-79228269 Msa1127600:CDS 35.0%
GTCATTGCGTTATGAAATGT+AGG - chr7_3:79228423-79228442 Msa1127600:CDS 35.0%
! ATGCAACAATTTTGTTGGCA+AGG + chr7_3:79228642-79228661 None:intergenic 35.0%
! TGCTGATTGCCATAAATAAC+TGG - chr7_3:79228789-79228808 Msa1127600:CDS 35.0%
CCATCAGAACCAGTTATTTA+TGG + chr7_3:79228801-79228820 None:intergenic 35.0%
!! CCATAAATAACTGGTTCTGA+TGG - chr7_3:79228798-79228817 Msa1127600:CDS 35.0%
CTTTATCGGATGCTTGAATA+AGG - chr7_3:79228903-79228922 Msa1127600:CDS 35.0%
!! CGTTTGTTATGACTGAAACT+GGG + chr7_3:79229022-79229041 None:intergenic 35.0%
!! ACGTTTGTTATGACTGAAAC+TGG + chr7_3:79229023-79229042 None:intergenic 35.0%
TCATCAATTTGATGCCACAT+AGG + chr7_3:79229229-79229248 None:intergenic 35.0%
TTACAACATAGTTTCCCACA+TGG + chr7_3:79229298-79229317 None:intergenic 35.0%
CACAGTTTCAATCAATATCC+TGG + chr7_3:79229335-79229354 None:intergenic 35.0%
TTGTATTTCTTCAGCTTGTG+TGG - chr7_3:79229371-79229390 Msa1127600:CDS 35.0%
!!! AGAAGCACTTTTTCCTTCAT+CGG + chr7_3:79229545-79229564 None:intergenic 35.0%
TCTCCTTCATTATTCATTCC+TGG - chr7_3:79229651-79229670 Msa1127600:intron 35.0%
ACACCAGGAATGAATAATGA+AGG + chr7_3:79229657-79229676 None:intergenic 35.0%
! TTTTACAAGAAGATGACACC+AGG + chr7_3:79229672-79229691 None:intergenic 35.0%
ATGTTAACGTCCTAAGTTGT+GGG + chr7_3:79229900-79229919 None:intergenic 35.0%
TAAAGAGGTAAGGGAAGAAT+GGG + chr7_3:79230364-79230383 None:intergenic 35.0%
GACAATGACTAAAGAGGTAA+GGG + chr7_3:79230373-79230392 None:intergenic 35.0%
AGACAATGACTAAAGAGGTA+AGG + chr7_3:79230374-79230393 None:intergenic 35.0%
AACCCAACACAACCTAATGT+TGG - chr7_3:79225592-79225611 Msa1127600:three_prime_UTR 40.0%
ACCCAACACAACCTAATGTT+GGG - chr7_3:79225593-79225612 Msa1127600:three_prime_UTR 40.0%
! ACCCAACATTAGGTTGTGTT+GGG + chr7_3:79225597-79225616 None:intergenic 40.0%
! AACCCAACATTAGGTTGTGT+TGG + chr7_3:79225598-79225617 None:intergenic 40.0%
GATCAAACTTCATCTGCCAA+TGG - chr7_3:79225742-79225761 Msa1127600:three_prime_UTR 40.0%
ACAGGAGATGTAAATACAGG+AGG + chr7_3:79225802-79225821 None:intergenic 40.0%
AAGGATCCATTTGAGTAACG+TGG + chr7_3:79225916-79225935 None:intergenic 40.0%
GACTTACAGTCACAAGTTTC+TGG - chr7_3:79225937-79225956 Msa1127600:three_prime_UTR 40.0%
! TTACAGTCACAAGTTTCTGG+TGG - chr7_3:79225940-79225959 Msa1127600:three_prime_UTR 40.0%
ACAAAGGATGACTCTCCATT+TGG + chr7_3:79225982-79226001 None:intergenic 40.0%
GATCAGCTGTTTAAGCAAAC+AGG - chr7_3:79226269-79226288 Msa1127600:intron 40.0%
ACAAGCAAATGTACCCAGTT+TGG - chr7_3:79226384-79226403 Msa1127600:CDS 40.0%
CAAGCAAATGTACCCAGTTT+GGG - chr7_3:79226385-79226404 Msa1127600:CDS 40.0%
!! AATGTACCCAGTTTGGGTTT+TGG - chr7_3:79226391-79226410 Msa1127600:CDS 40.0%
!! ATGTACCCAGTTTGGGTTTT+GGG - chr7_3:79226392-79226411 Msa1127600:CDS 40.0%
TGCAACATATTGCTTGGATC+AGG - chr7_3:79226514-79226533 Msa1127600:intron 40.0%
GACATATAACACATTGCCAC+TGG + chr7_3:79226540-79226559 None:intergenic 40.0%
CGAAAACTGAATGCAAGTGA+TGG - chr7_3:79226559-79226578 Msa1127600:intron 40.0%
TCCAGAACTATCTTCACCAA+TGG - chr7_3:79226621-79226640 Msa1127600:intron 40.0%
ACCATTGGTGAAGATAGTTC+TGG + chr7_3:79226625-79226644 None:intergenic 40.0%
! TCTGAAACTGGAACAAAACC+AGG + chr7_3:79226676-79226695 None:intergenic 40.0%
!! GACATTCTGGAATCTGAAAC+TGG + chr7_3:79226688-79226707 None:intergenic 40.0%
TAAAAAGTCGTACACCGACA+CGG + chr7_3:79226842-79226861 None:intergenic 40.0%
ACCAAGTGAAGATTCTCTGA+AGG - chr7_3:79226906-79226925 Msa1127600:intron 40.0%
! TCTCTGAAGGCTTTGCTTTA+TGG - chr7_3:79226919-79226938 Msa1127600:intron 40.0%
AAGGCTTTGCTTTATGGTAC+AGG - chr7_3:79226925-79226944 Msa1127600:intron 40.0%
CGGCGTCAATGATGAAAATA+TGG + chr7_3:79226995-79227014 None:intergenic 40.0%
! GGTTGCTCTTGCTATAATTC+AGG - chr7_3:79227071-79227090 Msa1127600:intron 40.0%
AAAGAATGAGGAACAGATCC+AGG + chr7_3:79227189-79227208 None:intergenic 40.0%
CCATATACGGATAATTAGGG+TGG + chr7_3:79227215-79227234 None:intergenic 40.0%
CCACCCTAATTATCCGTATA+TGG - chr7_3:79227212-79227231 Msa1127600:intron 40.0%
GGCTCATCGACACAATATAT+TGG - chr7_3:79227275-79227294 Msa1127600:intron 40.0%
!! AATCCTCTTGCAAAAGCATC+AGG - chr7_3:79227345-79227364 Msa1127600:intron 40.0%
!!! AAAAGCATCAGGTGGAGTTT+TGG - chr7_3:79227356-79227375 Msa1127600:intron 40.0%
!! GATGATTTTGGAGAAGCCTT+TGG - chr7_3:79227387-79227406 Msa1127600:intron 40.0%
GCCTACAGTAGATAGTGTTT+CGG - chr7_3:79227719-79227738 Msa1127600:intron 40.0%
CCTACAGTAGATAGTGTTTC+GGG - chr7_3:79227720-79227739 Msa1127600:intron 40.0%
!! GGGATATCTTGAAAGTGTTC+AGG - chr7_3:79227740-79227759 Msa1127600:intron 40.0%
!! TGAAAGTGTTCAGGATGAAG+TGG - chr7_3:79227749-79227768 Msa1127600:intron 40.0%
ATTCAGTGGCTGTTGATATG+CGG - chr7_3:79227817-79227836 Msa1127600:CDS 40.0%
GTAAGAGAGAAAGCTCCTTT+GGG + chr7_3:79227920-79227939 None:intergenic 40.0%
AAAGGAGCTTTCTCTCTTAC+CGG - chr7_3:79227920-79227939 Msa1127600:CDS 40.0%
CCAATAATGCATCCCAATAG+TGG + chr7_3:79227972-79227991 None:intergenic 40.0%
CCACTATTGGGATGCATTAT+TGG - chr7_3:79227969-79227988 Msa1127600:CDS 40.0%
TTATTGGCCATGAAGATGAG+AGG - chr7_3:79227985-79228004 Msa1127600:CDS 40.0%
TAGAAATAGGTTCCTCAGCA+CGG + chr7_3:79228012-79228031 None:intergenic 40.0%
TGATCTATCTCTCAGAATGG+TGG - chr7_3:79228043-79228062 Msa1127600:CDS 40.0%
AACTGATGTCTTCATTTGGC+TGG - chr7_3:79228166-79228185 Msa1127600:CDS 40.0%
TCTATCACAGGTTACACAAC+AGG + chr7_3:79228368-79228387 None:intergenic 40.0%
TGTAGGAACAGTAGTTAGTC+TGG - chr7_3:79228440-79228459 Msa1127600:CDS 40.0%
GATGATTGTCTGAATCAACG+TGG - chr7_3:79228671-79228690 Msa1127600:CDS 40.0%
ATATGCAAAAGAGCAAAGGG+CGG + chr7_3:79228760-79228779 None:intergenic 40.0%
TATCGGATGCTTGAATAAGG+CGG - chr7_3:79228906-79228925 Msa1127600:CDS 40.0%
!! AAAGCAACAATTTGTTGCCG+CGG + chr7_3:79229077-79229096 None:intergenic 40.0%
!! CGGCAACAAATTGTTGCTTT+CGG - chr7_3:79229077-79229096 Msa1127600:CDS 40.0%
!! GGCAACAAATTGTTGCTTTC+GGG - chr7_3:79229078-79229097 Msa1127600:CDS 40.0%
CAAAGTTTCTTCTGCCTATG+TGG - chr7_3:79229212-79229231 Msa1127600:CDS 40.0%
TATTTCTTCAGCTTGTGTGG+TGG - chr7_3:79229374-79229393 Msa1127600:CDS 40.0%
! GGCTCTTGGAACATTTTTGT+TGG - chr7_3:79229395-79229414 Msa1127600:CDS 40.0%
!! AGGAAAAAGTGCTTCTGCTT+TGG - chr7_3:79229549-79229568 Msa1127600:CDS 40.0%
GAAAACTGACCTTGAATGCA+AGG + chr7_3:79229633-79229652 None:intergenic 40.0%
TTGTTTACCTGCTCATAAGG+AGG + chr7_3:79229791-79229810 None:intergenic 40.0%
!! GTGTTGTTTACCTGCTCATA+AGG + chr7_3:79229794-79229813 None:intergenic 40.0%
! CATTTGGAGTCTCACATCAA+AGG + chr7_3:79229831-79229850 None:intergenic 40.0%
!!! TTATTTTTGTGCAGGAGGCA+AGG - chr7_3:79229872-79229891 Msa1127600:intron 40.0%
GATGTTAACGTCCTAAGTTG+TGG + chr7_3:79229901-79229920 None:intergenic 40.0%
ACGATCCAAGTTTCTGTGAA+TGG - chr7_3:79229962-79229981 Msa1127600:intron 40.0%
TGAATGGATGCGAAGTTTGA+AGG - chr7_3:79229978-79229997 Msa1127600:intron 40.0%
GTCTTCTGCATTAGGTGATT+CGG - chr7_3:79230033-79230052 Msa1127600:CDS 40.0%
GTGAACAAAATGAATGGGAG+AGG + chr7_3:79230175-79230194 None:intergenic 40.0%
CTAAAGAGGTAAGGGAAGAA+TGG + chr7_3:79230365-79230384 None:intergenic 40.0%
CCATGAGACAATGACTAAAG+AGG + chr7_3:79230379-79230398 None:intergenic 40.0%
CCTCTTTAGTCATTGTCTCA+TGG - chr7_3:79230376-79230395 Msa1127600:CDS 40.0%
AGTCATTGTCTCATGGAAAG+TGG - chr7_3:79230383-79230402 Msa1127600:CDS 40.0%
GATGGGATGAACCCAACATT+AGG + chr7_3:79225607-79225626 None:intergenic 45.0%
ATACTAGTTGAAGGAGGAGG+AGG + chr7_3:79225673-79225692 None:intergenic 45.0%
ATTGGTGGAGGAAATCTAGG+TGG + chr7_3:79225706-79225725 None:intergenic 45.0%
TAAATACAGGAGGTCCAGGA+GGG + chr7_3:79225792-79225811 None:intergenic 45.0%
GATGTAAATACAGGAGGTCC+AGG + chr7_3:79225796-79225815 None:intergenic 45.0%
CGGACAGGAGATGTAAATAC+AGG + chr7_3:79225805-79225824 None:intergenic 45.0%
GGGTGAAGTTCGAAAAGGAA+TGG + chr7_3:79225836-79225855 None:intergenic 45.0%
GATCCATTTGAGTAACGTGG+TGG + chr7_3:79225913-79225932 None:intergenic 45.0%
!! ACAAGTTTCTGGTGGCTTAG+AGG - chr7_3:79225948-79225967 Msa1127600:three_prime_UTR 45.0%
! AAACTGTTTGGGAGAGCACA+TGG - chr7_3:79226126-79226145 Msa1127600:intron 45.0%
TGTTATCACAAGAACCTCGC+CGG - chr7_3:79226153-79226172 Msa1127600:intron 45.0%
AACTATAAACTACTCCGGCG+AGG + chr7_3:79226170-79226189 None:intergenic 45.0%
!! TGTACCCAGTTTGGGTTTTG+GGG - chr7_3:79226393-79226412 Msa1127600:CDS 45.0%
AATGCCCCAAAACCCAAACT+GGG + chr7_3:79226400-79226419 None:intergenic 45.0%
AACTACTGGTGCAGACATTC+TGG + chr7_3:79226701-79226720 None:intergenic 45.0%
! CTCTGAAGATGCTGTAAGTG+AGG + chr7_3:79226751-79226770 None:intergenic 45.0%
CTCCCTCCAACAACAAGATT+AGG - chr7_3:79226796-79226815 Msa1127600:intron 45.0%
GCCTTCAGAGAATCTTCACT+TGG + chr7_3:79226910-79226929 None:intergenic 45.0%
TACCAGAAGCTTCCAGAGAT+CGG - chr7_3:79227028-79227047 Msa1127600:intron 45.0%
AGAATTATTGTCTGTGCCGG+TGG - chr7_3:79227147-79227166 Msa1127600:intron 45.0%
GCTCTCTCTATGGAAACCAA+AGG - chr7_3:79227603-79227622 Msa1127600:intron 45.0%
CCCGAAACACTATCTACTGT+AGG + chr7_3:79227723-79227742 None:intergenic 45.0%
AACAGCCACTGAATGGTTCT+TGG + chr7_3:79227811-79227830 None:intergenic 45.0%
GCATATCAACAGCCACTGAA+TGG + chr7_3:79227818-79227837 None:intergenic 45.0%
TTCAGTGGCTGTTGATATGC+GGG - chr7_3:79227818-79227837 Msa1127600:CDS 45.0%
GGTAAGAGAGAAAGCTCCTT+TGG + chr7_3:79227921-79227940 None:intergenic 45.0%
! TCCTTTTCCATCTCAGGAGA+GGG - chr7_3:79227946-79227965 Msa1127600:CDS 45.0%
TCCTCGTTGTCTAATGCACA+GGG - chr7_3:79228067-79228086 Msa1127600:CDS 45.0%
TGCATGGCAAGATCATAAGC+CGG + chr7_3:79228116-79228135 None:intergenic 45.0%
AACAGCAGTATCAGACTGCA+TGG + chr7_3:79228132-79228151 None:intergenic 45.0%
ACTGCTGTTGTACTTGACCA+TGG - chr7_3:79228143-79228162 Msa1127600:CDS 45.0%
CAACATGAACAATTGCTGGC+AGG + chr7_3:79228329-79228348 None:intergenic 45.0%
! TGCAGTATTGAGTGGTGCAT+AGG - chr7_3:79228481-79228500 Msa1127600:CDS 45.0%
AGGCTGGGTTGTATTTCCAT+TGG + chr7_3:79228560-79228579 None:intergenic 45.0%
! TTTCCTCAAGGGGTATGAGT+TGG - chr7_3:79228864-79228883 Msa1127600:CDS 45.0%
! TTCCTCAAGGGGTATGAGTT+GGG - chr7_3:79228865-79228884 Msa1127600:CDS 45.0%
!! GTTTGTTTTCACACTGACCG+CGG - chr7_3:79229057-79229076 Msa1127600:CDS 45.0%
TGCAATGGCACTGCAGTATT+TGG + chr7_3:79229274-79229293 None:intergenic 45.0%
TCCTCGTATCCTTGCATTCA+AGG - chr7_3:79229621-79229640 Msa1127600:intron 45.0%
ACCTTGAATGCAAGGATACG+AGG + chr7_3:79229625-79229644 None:intergenic 45.0%
CGCATCCATTCACAGAAACT+TGG + chr7_3:79229970-79229989 None:intergenic 45.0%
AAGACTACCGGTCATCAACT+CGG + chr7_3:79230018-79230037 None:intergenic 45.0%
CACCTAATGCAGAAGACTAC+CGG + chr7_3:79230030-79230049 None:intergenic 45.0%
! TTCTGCATTAGGTGATTCGG+TGG - chr7_3:79230036-79230055 Msa1127600:CDS 45.0%
! GGCTTCACCAAGACCTTTTA+AGG + chr7_3:79230076-79230095 None:intergenic 45.0%
!! TTATACATTAAAAAAAAAAA+AGG + chr7_3:79226321-79226340 None:intergenic 5.0%
GGAGGGGGATGAATTGGAAT+TGG + chr7_3:79225652-79225671 None:intergenic 50.0%
TAGTTGAAGGAGGAGGAGGA+GGG + chr7_3:79225669-79225688 None:intergenic 50.0%
AAATACAGGAGGTCCAGGAG+GGG + chr7_3:79225791-79225810 None:intergenic 50.0%
GTAAATACAGGAGGTCCAGG+AGG + chr7_3:79225793-79225812 None:intergenic 50.0%
GAAAAGGAATGGCAGCTGGA+CGG + chr7_3:79225825-79225844 None:intergenic 50.0%
GTTCGAAAAGGAATGGCAGC+TGG + chr7_3:79225829-79225848 None:intergenic 50.0%
GAAGCGGGTGAAGTTCGAAA+AGG + chr7_3:79225841-79225860 None:intergenic 50.0%
TCGCCACCACGTTACTCAAA+TGG - chr7_3:79225907-79225926 Msa1127600:three_prime_UTR 50.0%
CAATGCCCCAAAACCCAAAC+TGG + chr7_3:79226401-79226420 None:intergenic 50.0%
!!! CAGTTTGGGTTTTGGGGCAT+TGG - chr7_3:79226399-79226418 Msa1127600:CDS 50.0%
TATTGCTTGGATCAGGCCAG+TGG - chr7_3:79226521-79226540 Msa1127600:intron 50.0%
TGGAACAAAACCAGGTCGCT+TGG + chr7_3:79226668-79226687 None:intergenic 50.0%
ACTATATGGCCGTACCGTGT+CGG - chr7_3:79226825-79226844 Msa1127600:intron 50.0%
CATCTGCTGATGTGCTTCCT+GGG - chr7_3:79226875-79226894 Msa1127600:intron 50.0%
ATCTGCTGATGTGCTTCCTG+GGG - chr7_3:79226876-79226895 Msa1127600:intron 50.0%
GTCACCAATGCATGCTTCAC+TGG - chr7_3:79226957-79226976 Msa1127600:intron 50.0%
ACAGCCAGTGAAGCATGCAT+TGG + chr7_3:79226964-79226983 None:intergenic 50.0%
CAACCTCAACAGCAGTTCCT+AGG + chr7_3:79227056-79227075 None:intergenic 50.0%
CTCGAGACAGATCAGCAGAT+GGG + chr7_3:79227098-79227117 None:intergenic 50.0%
CATCTGCTGATCTGTCTCGA+GGG - chr7_3:79227097-79227116 Msa1127600:intron 50.0%
ATCTGCTGATCTGTCTCGAG+GGG - chr7_3:79227098-79227117 Msa1127600:intron 50.0%
TGTCTCGAGGGGTTGTCAAA+AGG - chr7_3:79227109-79227128 Msa1127600:intron 50.0%
GAGGGGTTGTCAAAAGGTCA+GGG - chr7_3:79227115-79227134 Msa1127600:intron 50.0%
AGGGGTTGTCAAAAGGTCAG+GGG - chr7_3:79227116-79227135 Msa1127600:intron 50.0%
GATCCAGGCCCATAAGTGTT+CGG + chr7_3:79227174-79227193 None:intergenic 50.0%
GATGGAGAATTTAGGTCGCG+AGG - chr7_3:79227254-79227273 Msa1127600:intron 50.0%
! CCACCTGATGCTTTTGCAAG+AGG + chr7_3:79227351-79227370 None:intergenic 50.0%
!! CCTCTTGCAAAAGCATCAGG+TGG - chr7_3:79227348-79227367 Msa1127600:intron 50.0%
! GCGCAGTTCTAACAATCCGT+GGG + chr7_3:79227451-79227470 None:intergenic 50.0%
! TGCGCAGTTCTAACAATCCG+TGG + chr7_3:79227452-79227471 None:intergenic 50.0%
! ATCACTCAAGTTGTGGGTCC+AGG - chr7_3:79227489-79227508 Msa1127600:intron 50.0%
! TCACTCAAGTTGTGGGTCCA+GGG - chr7_3:79227490-79227509 Msa1127600:intron 50.0%
TCTACATGAGACTCTTCCCC+TGG + chr7_3:79227510-79227529 None:intergenic 50.0%
ACAGAGCTTCGCTCTCTCTA+TGG - chr7_3:79227593-79227612 Msa1127600:intron 50.0%
TGTACCAGGCTGATGTCTCA+AGG - chr7_3:79227679-79227698 Msa1127600:intron 50.0%
GTACCAGGCTGATGTCTCAA+GGG - chr7_3:79227680-79227699 Msa1127600:intron 50.0%
ACGAGCCAAGAACCATTCAG+TGG - chr7_3:79227803-79227822 Msa1127600:intron 50.0%
CTGAGATGGAAAAGGAGCTC+CGG + chr7_3:79227942-79227961 None:intergenic 50.0%
! CTCCTTTTCCATCTCAGGAG+AGG - chr7_3:79227945-79227964 Msa1127600:CDS 50.0%
CTCCTCGTTGTCTAATGCAC+AGG - chr7_3:79228066-79228085 Msa1127600:CDS 50.0%
TCCCTGTGCATTAGACAACG+AGG + chr7_3:79228071-79228090 None:intergenic 50.0%
TCGTTGTCTAATGCACAGGG+AGG - chr7_3:79228070-79228089 Msa1127600:CDS 50.0%
CGTTGTCTAATGCACAGGGA+GGG - chr7_3:79228071-79228090 Msa1127600:CDS 50.0%
GTTGTCTAATGCACAGGGAG+GGG - chr7_3:79228072-79228091 Msa1127600:CDS 50.0%
TTGTCTAATGCACAGGGAGG+GGG - chr7_3:79228073-79228092 Msa1127600:CDS 50.0%
!! GGGAACTTTTGAGGAGCTAC+CGG - chr7_3:79228094-79228113 Msa1127600:CDS 50.0%
!!! ACCCAGCCTTTTTTGTCACC+AGG - chr7_3:79228571-79228590 Msa1127600:CDS 50.0%
GCCTGGTGACAAAAAAGGCT+GGG + chr7_3:79228575-79228594 None:intergenic 50.0%
! TGCTGGCCTGGTGACAAAAA+AGG + chr7_3:79228580-79228599 None:intergenic 50.0%
AGTTTCCCACATGGCTGCAA+TGG + chr7_3:79229289-79229308 None:intergenic 50.0%
GCTGAACTTGTAGCCGATGA+AGG - chr7_3:79229529-79229548 Msa1127600:CDS 50.0%
TTTGGCTGCATGCAGGACAT+TGG - chr7_3:79229567-79229586 Msa1127600:CDS 50.0%
AGGAGCTGGAAAACGGAACT+CGG + chr7_3:79229605-79229624 None:intergenic 50.0%
GGATACGAGGAGCTGGAAAA+CGG + chr7_3:79229612-79229631 None:intergenic 50.0%
AATGCAAGGATACGAGGAGC+TGG + chr7_3:79229619-79229638 None:intergenic 50.0%
TGTGAGCTGGTATGAGACGT+GGG + chr7_3:79229763-79229782 None:intergenic 50.0%
TTGTGAGCTGGTATGAGACG+TGG + chr7_3:79229764-79229783 None:intergenic 50.0%
ACGTCTCATACCAGCTCACA+AGG - chr7_3:79229763-79229782 Msa1127600:intron 50.0%
TAAGGAGGATCCTTGTGAGC+TGG + chr7_3:79229776-79229795 None:intergenic 50.0%
CAAGGATCCTCCTTATGAGC+AGG - chr7_3:79229781-79229800 Msa1127600:intron 50.0%
AGGCAAGGTTCCCACAACTT+AGG - chr7_3:79229887-79229906 Msa1127600:intron 50.0%
!! ACCTCAACCGAGTTGATGAC+CGG - chr7_3:79230008-79230027 Msa1127600:CDS 50.0%
GACCGGTAGTCTTCTGCATT+AGG - chr7_3:79230025-79230044 Msa1127600:CDS 50.0%
AGTTGAAGGAGGAGGAGGAG+GGG + chr7_3:79225668-79225687 None:intergenic 55.0%
CTAGTTGAAGGAGGAGGAGG+AGG + chr7_3:79225670-79225689 None:intergenic 55.0%
GGTGGAGGAAATCTAGGTGG+TGG + chr7_3:79225703-79225722 None:intergenic 55.0%
GTGAGGAACTGGACTGCCAT+TGG + chr7_3:79225761-79225780 None:intergenic 55.0%
! GGGGTACTCAAGTGAGGAAC+TGG + chr7_3:79225772-79225791 None:intergenic 55.0%
GGTTGGCAAAGAAGAGGCTG+AGG + chr7_3:79225884-79225903 None:intergenic 55.0%
CGACGAGGTTGGCAAAGAAG+AGG + chr7_3:79225890-79225909 None:intergenic 55.0%
!! TTTGGGGCATTGGTCTCTCC+TGG - chr7_3:79226409-79226428 Msa1127600:CDS 55.0%
!! GGCATTGGTCTCTCCTGGTA+GGG - chr7_3:79226414-79226433 Msa1127600:CDS 55.0%
! ATTGGTCTCTCCTGGTAGGG+AGG - chr7_3:79226417-79226436 Msa1127600:CDS 55.0%
GATCGCGCTGTATTACCTGG+GGG + chr7_3:79226453-79226472 None:intergenic 55.0%
GGATCGCGCTGTATTACCTG+GGG + chr7_3:79226454-79226473 None:intergenic 55.0%
GGGATCGCGCTGTATTACCT+GGG + chr7_3:79226455-79226474 None:intergenic 55.0%
! CCACAGCTTTGACAGCGATG+GGG + chr7_3:79226475-79226494 None:intergenic 55.0%
! CCCACAGCTTTGACAGCGAT+GGG + chr7_3:79226476-79226495 None:intergenic 55.0%
CCCATCGCTGTCAAAGCTGT+GGG - chr7_3:79226473-79226492 Msa1127600:intron 55.0%
CCATCGCTGTCAAAGCTGTG+GGG - chr7_3:79226474-79226493 Msa1127600:intron 55.0%
AGTCGTACACCGACACGGTA+CGG + chr7_3:79226837-79226856 None:intergenic 55.0%
GCATCTGCTGATGTGCTTCC+TGG - chr7_3:79226874-79226893 Msa1127600:intron 55.0%
! TCACTTGGTGACTTGTCCCC+AGG + chr7_3:79226895-79226914 None:intergenic 55.0%
! CACCGATCTCTGGAAGCTTC+TGG + chr7_3:79227033-79227052 None:intergenic 55.0%
!! AGTTCCTAGGCACCGATCTC+TGG + chr7_3:79227043-79227062 None:intergenic 55.0%
GTGCCTAGGAACTGCTGTTG+AGG - chr7_3:79227050-79227069 Msa1127600:intron 55.0%
CCTCGAGACAGATCAGCAGA+TGG + chr7_3:79227099-79227118 None:intergenic 55.0%
CCATCTGCTGATCTGTCTCG+AGG - chr7_3:79227096-79227115 Msa1127600:intron 55.0%
CGAGGGGTTGTCAAAAGGTC+AGG - chr7_3:79227114-79227133 Msa1127600:intron 55.0%
GGGGTTGTCAAAAGGTCAGG+GGG - chr7_3:79227117-79227136 Msa1127600:intron 55.0%
CCCATAAGTGTTCGGTCCAC+CGG + chr7_3:79227166-79227185 None:intergenic 55.0%
CCGGTGGACCGAACACTTAT+GGG - chr7_3:79227163-79227182 Msa1127600:intron 55.0%
! CACTCAAGTTGTGGGTCCAG+GGG - chr7_3:79227491-79227510 Msa1127600:intron 55.0%
! CGGAGCTCCTTTTCCATCTC+AGG - chr7_3:79227940-79227959 Msa1127600:CDS 55.0%
GCCCTCTCCTGAGATGGAAA+AGG + chr7_3:79227950-79227969 None:intergenic 55.0%
ATAGTGGCCCTCTCCTGAGA+TGG + chr7_3:79227956-79227975 None:intergenic 55.0%
TCTCAGGAGAGGGCCACTAT+TGG - chr7_3:79227956-79227975 Msa1127600:CDS 55.0%
CTCAGGAGAGGGCCACTATT+GGG - chr7_3:79227957-79227976 Msa1127600:CDS 55.0%
GCACGGACCTCTCATCTTCA+TGG + chr7_3:79227995-79228014 None:intergenic 55.0%
AAGATGAGAGGTCCGTGCTG+AGG - chr7_3:79227997-79228016 Msa1127600:CDS 55.0%
TGTCTAATGCACAGGGAGGG+GGG - chr7_3:79228074-79228093 Msa1127600:CDS 55.0%
GGCCTGGTGACAAAAAAGGC+TGG + chr7_3:79228576-79228595 None:intergenic 55.0%
AGCTGCAGTTGCTGCTGGAA+TGG + chr7_3:79228607-79228626 None:intergenic 55.0%
ATTCCAGCAGCAACTGCAGC+TGG - chr7_3:79228606-79228625 Msa1127600:CDS 55.0%
GACCCAACTCATACCCCTTG+AGG + chr7_3:79228870-79228889 None:intergenic 55.0%
! CAGTGCCATTGCAGCCATGT+GGG - chr7_3:79229281-79229300 Msa1127600:CDS 55.0%
TCAGCTTGTGTGGTGGCTCT+TGG - chr7_3:79229381-79229400 Msa1127600:CDS 55.0%
CTTCTGCTTTGGCTGCATGC+AGG - chr7_3:79229560-79229579 Msa1127600:CDS 55.0%
AAAACAGGAGGGTAGCTCGC+AGG - chr7_3:79229724-79229743 Msa1127600:intron 55.0%
GGTCATCAACTCGGTTGAGG+TGG + chr7_3:79230009-79230028 None:intergenic 55.0%
ACCGGTCATCAACTCGGTTG+AGG + chr7_3:79230012-79230031 None:intergenic 55.0%
GGAGGAGGAGGGGGATGAAT+TGG + chr7_3:79225658-79225677 None:intergenic 60.0%
GTTGAAGGAGGAGGAGGAGG+GGG + chr7_3:79225667-79225686 None:intergenic 60.0%
!! CCAGGAGGGGTACTCAAGTG+AGG + chr7_3:79225778-79225797 None:intergenic 60.0%
CCTCACTTGAGTACCCCTCC+TGG - chr7_3:79225775-79225794 Msa1127600:three_prime_UTR 60.0%
GAAGAGGCTGAGGAACGAGC+CGG + chr7_3:79225874-79225893 None:intergenic 60.0%
! TAACGTGGTGGCGACGAGGT+TGG + chr7_3:79225901-79225920 None:intergenic 60.0%
! TGAGTAACGTGGTGGCGACG+AGG + chr7_3:79225905-79225924 None:intergenic 60.0%
!! GGGCATTGGTCTCTCCTGGT+AGG - chr7_3:79226413-79226432 Msa1127600:CDS 60.0%
CCAGTTGAGACCTCCCTACC+AGG + chr7_3:79226430-79226449 None:intergenic 60.0%
CCTGGTAGGGAGGTCTCAAC+TGG - chr7_3:79226427-79226446 Msa1127600:CDS 60.0%
GGGGATCGCGCTGTATTACC+TGG + chr7_3:79226456-79226475 None:intergenic 60.0%
CCCCATCGCTGTCAAAGCTG+TGG - chr7_3:79226472-79226491 Msa1127600:intron 60.0%
! CCCCACAGCTTTGACAGCGA+TGG + chr7_3:79226477-79226496 None:intergenic 60.0%
CAAACTGGGACCAAGCGACC+TGG - chr7_3:79226655-79226674 Msa1127600:intron 60.0%
! GCTTCCAGAGATCGGTGCCT+AGG - chr7_3:79227036-79227055 Msa1127600:intron 60.0%
GCCGGTGGACCGAACACTTA+TGG - chr7_3:79227162-79227181 Msa1127600:intron 60.0%
GGACCGAACACTTATGGGCC+TGG - chr7_3:79227168-79227187 Msa1127600:intron 60.0%
CGACCCTTGAGACATCAGCC+TGG + chr7_3:79227686-79227705 None:intergenic 60.0%
! CAGGGAGGGGGGAACTTTTG+AGG - chr7_3:79228085-79228104 Msa1127600:CDS 60.0%
CAACTGCAGCTGGTGGCAGA+TGG - chr7_3:79228616-79228635 Msa1127600:CDS 60.0%
! GCAGTGCCATTGCAGCCATG+TGG - chr7_3:79229280-79229299 Msa1127600:CDS 60.0%
GGAATGGCAGCTGGACGGAC+AGG + chr7_3:79225820-79225839 None:intergenic 65.0%
! AGGGCGTCTGCCAGATCAGC+AGG - chr7_3:79227423-79227442 Msa1127600:intron 65.0%
GCCAGATCAGCAGGCTCCCA+CGG - chr7_3:79227432-79227451 Msa1127600:intron 65.0%
TCCGTGGGAGCCTGCTGATC+TGG + chr7_3:79227436-79227455 None:intergenic 65.0%
TGGAATGGCAGCTGCTGGCC+TGG + chr7_3:79228592-79228611 None:intergenic 65.0%
GCTGCTGGAATGGCAGCTGC+TGG + chr7_3:79228597-79228616 None:intergenic 65.0%
CCACCAGCTGCAGTTGCTGC+TGG + chr7_3:79228612-79228631 None:intergenic 65.0%
CCAGCAGCAACTGCAGCTGG+TGG - chr7_3:79228609-79228628 Msa1127600:CDS 65.0%
GAGGCTGAGGAACGAGCCGG+CGG + chr7_3:79225871-79225890 None:intergenic 70.0%
GGAGGTCTCAACTGGCCCCC+AGG - chr7_3:79226435-79226454 Msa1127600:CDS 70.0%
ACCCGCTTCGCCTCAGCCGC+CGG - chr7_3:79225852-79225871 Msa1127600:three_prime_UTR 75.0%
AGCCGGCGGCTGAGGCGAAG+CGG + chr7_3:79225857-79225876 None:intergenic 75.0%
GAGGAACGAGCCGGCGGCTG+AGG + chr7_3:79225865-79225884 None:intergenic 75.0%
! GCCGGCGGCTGAGGCGAAGC+GGG + chr7_3:79225856-79225875 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 79225583 79230409 79225583 ID=Msa1127600;Name=Msa1127600
chr7_3 mRNA 79225583 79230409 79225583 ID=Msa1127600-mRNA-1;Parent=Msa1127600;Name=Msa1127600-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.8|1|1|1|5|386|854
chr7_3 exon 79225583 79226106 79225583 ID=Msa1127600-mRNA-1:exon:22399;Parent=Msa1127600-mRNA-1
chr7_3 exon 79226190 79226261 79226190 ID=Msa1127600-mRNA-1:exon:22398;Parent=Msa1127600-mRNA-1
chr7_3 exon 79226350 79226466 79226350 ID=Msa1127600-mRNA-1:exon:22397;Parent=Msa1127600-mRNA-1
chr7_3 exon 79227805 79229625 79227805 ID=Msa1127600-mRNA-1:exon:22396;Parent=Msa1127600-mRNA-1
chr7_3 exon 79229993 79230409 79229993 ID=Msa1127600-mRNA-1:exon:22395;Parent=Msa1127600-mRNA-1
chr7_3 CDS 79229993 79230409 79229993 ID=Msa1127600-mRNA-1:cds;Parent=Msa1127600-mRNA-1
chr7_3 CDS 79227805 79229625 79227805 ID=Msa1127600-mRNA-1:cds;Parent=Msa1127600-mRNA-1
chr7_3 CDS 79226350 79226466 79226350 ID=Msa1127600-mRNA-1:cds;Parent=Msa1127600-mRNA-1
chr7_3 CDS 79226190 79226261 79226190 ID=Msa1127600-mRNA-1:cds;Parent=Msa1127600-mRNA-1
chr7_3 CDS 79225969 79226106 79225969 ID=Msa1127600-mRNA-1:cds;Parent=Msa1127600-mRNA-1
chr7_3 three_prime_UTR 79225583 79225968 79225583 ID=Msa1127600-mRNA-1:three_prime_utr;Parent=Msa1127600-mRNA-1
Gene Sequence

>Msa1127600

ATGGCTAATAACCCAACACAACCTAATGTTGGGTTCATCCCATCAAACCCAGAACAAAAACAGACTCCAATTCCAATTCATCCCCCTCCTCCTCCTCCTTCAACTAGTATTTTAGCACCACCACCTAGATTTCCTCCACCAATATTACAATTACAGAAAGATCAAACTTCATCTGCCAATGGCAGTCCAGTTCCTCACTTGAGTACCCCTCCTGGACCTCCTGTATTTACATCTCCTGTCCGTCCAGCTGCCATTCCTTTTCGAACTTCACCCGCTTCGCCTCAGCCGCCGGCTCGTTCCTCAGCCTCTTCTTTGCCAACCTCGTCGCCACCACGTTACTCAAATGGATCCTTTGACTTACAGTCACAAGTTTCTGGTGGCTTAGAGGATCATATTCCAAATGGAGAGTCATCCTTTGTATTGAAGCAGAAGAAACAAGCAAATGTACCCAGTTTGGGTTTTGGGGCATTGGTCTCTCCTGGTAGGGAGGTCTCAACTGGCCCCCAGGTAATACAGCGCGATCCCCATCGCTGTCAAAGCTGTGGGGCATATGCAAATATATATTGCAACATATTGCTTGGATCAGGCCAGTGGCAATGTGTTATATGTCGAAAACTGAATGCAAGTGATGGTGAGTACATTGCACATAGCAAAGAAGATCTTCACAGATTTCCAGAACTATCTTCACCAATGGTTGACTTTGTTCAAACTGGGACCAAGCGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCACCAGTAGTTCTTGTAATAGATGAATGTCTAGATGAACCTCACTTACAGCATCTTCAGAGCTCTTTGCATGCATTTGTTGATTCTCTCCCTCCAACAACAAGATTAGGAATTATACTATATGGCCGTACCGTGTCGGTGTACGACTTTTTAGAAGAATCAGTTGCATCTGCTGATGTGCTTCCTGGGGACAAGTCACCAAGTGAAGATTCTCTGAAGGCTTTGCTTTATGGTACAGGTATATATTTGTCACCAATGCATGCTTCACTGGCTGTAGCGCATTCCATATTTTCATCATTGACGCCGTATAAGTTGAACGTACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATCTGTCTCGAGGGGTTGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTATGGGCCTGGATCTGTTCCTCATTCTTTTAACCACCCTAATTATCCGTATATGGAAAAGACAGCATTGAAATGGATGGAGAATTTAGGTCGCGAGGCTCATCGACACAATATATTGGTTGATATATTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTAAATCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGAGAAGCCTTTGGCGTTAATTTACAAAGGGCGTCTGCCAGATCAGCAGGCTCCCACGGATTGTTAGAACTGCGCACATCCGACGATATTCTCATCACTCAAGTTGTGGGTCCAGGGGAAGAGTCTCATGTAGACACCCATGAAACATTTAAAAACGACGCCGCTCTTTATATTCAAATGCTAAGTGTTGAAGAGACACAGAGCTTCGCTCTCTCTATGGAAACCAAAGGAGACATCAAAAGTGATTTTGTCTTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTACCAGGCTGATGTCTCAAGGGTCGTTACTGTTAGATTGCCTACAGTAGATAGTGTTTCGGGATATCTTGAAAGTGTTCAGGATGAAGTGGCTGCTGTGCTCATTGCAAAGAGAACTCTGTTACGAGCCAAGAACCATTCAGTGGCTGTTGATATGCGGGTAACAATAGATGAAAGAATCAAGGATATTGGTCTAAAATTTGGCTCCCAATTACCCAAATCAAAACTTCATTGTTTCCCAAAGGAGCTTTCTCTCTTACCGGAGCTCCTTTTCCATCTCAGGAGAGGGCCACTATTGGGATGCATTATTGGCCATGAAGATGAGAGGTCCGTGCTGAGGAACCTATTTCTAAATGCATCTTTTGATCTATCTCTCAGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTTGCCATGCAGTCTGATACTGCTGTTGTACTTGACCATGGAACTGATGTCTTCATTTGGCTGGGTGCTGAACTTGTAGCCGATGAAGGAAAAAGTGCTTCTGCTTTGGCTGCATGCAGGACATTGGCTGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTCAAGGAGGGTAGCTCGCAGGCTCGATATTTTGTCCCACGTCTCATACCAGCTCACAAGGATCCTCCTTATGAGCAGGAGGCAAGGTTCCCACAACTTAGGACGTTAACATCAGAACAGAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTCGACGATCCAAGTTTCTGTGAATGGATGCGAAGTTTGAAGGTCGTACCACCTCAACCGAGTTGA
Protein sequence

>Msa1127600

MANNPTQPNVGFIPSNPEQKQTPIPIHPPPPPPSTSILAPPPRFPPPILQLQKDQTSSANGSPVPHLSTPPGPPVFTSPVRPAAIPFRTSPASPQPPARSSASSLPTSSPPRYSNGSFDLQSQVSGGLEDHIPNGESSFVLKQKKQANVPSLGFGALVSPGREVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNASDGEYIAHSKEDLHRFPELSSPMVDFVQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFLEESVASADVLPGDKSPSEDSLKALLYGTGIYLSPMHASLAVAHSIFSSLTPYKLNVPEASRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRHNILVDILCAGTCPVRVPILNPLAKASGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDAALYIQMLSVEETQSFALSMETKGDIKSDFVFFQFAIQYSNVYQADVSRVVTVRLPTVDSVSGYLESVQDEVAAVLIAKRTLLRAKNHSVAVDMRVTIDERIKDIGLKFGSQLPKSKLHCFPKELSLLPELLFHLRRGPLLGCIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDVFIWLGAELVADEGKSASALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVPRLIPAHKDPPYEQEARFPQLRTLTSEQRTKLKSSFVHFDDPSFCEWMRSLKVVPPQPS*