Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083800 | XP_003626371.2 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1386 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083800 | sp|Q9ZVN2|PES1_ARATH | 65.815 | 626 | 208 | 4 | 79 | 701 | 82 | 704 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083800 | G7L0R8 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1386 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1083800 | Msa1129080 | 0.977962 | 7.688033e-145 | -8.615850e-47 |
| Msa1083800 | Msa1388650 | 0.977807 | 1.591243e-144 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083800 | MtrunA17_Chr7g0273621 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1386 |
| Msa1083800 | MtrunA17_Chr7g0251571 | 53.261 | 644 | 285 | 5 | 60 | 700 | 66 | 696 | 0.0 | 689 |
| Msa1083800 | MtrunA17_Chr7g0251541 | 51.074 | 652 | 299 | 5 | 51 | 700 | 37 | 670 | 0.0 | 664 |
| Msa1083800 | MtrunA17_Chr7g0251561 | 45.875 | 606 | 258 | 5 | 131 | 699 | 4 | 576 | 1.14e-178 | 523 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083800 | AT1G54570.1 | 65.815 | 626 | 208 | 4 | 79 | 701 | 82 | 704 | 0.0 | 860 |
| Msa1083800 | AT3G26840.1 | 47.239 | 652 | 327 | 6 | 62 | 699 | 51 | 699 | 0.0 | 584 |
| Msa1083800 | AT3G02030.2 | 47.812 | 617 | 312 | 6 | 87 | 699 | 54 | 664 | 0.0 | 578 |
| Msa1083800 | AT5G41130.1 | 47.403 | 616 | 319 | 3 | 87 | 699 | 70 | 683 | 0.0 | 577 |
| Msa1083800 | AT5G41120.3 | 46.104 | 616 | 327 | 3 | 87 | 699 | 71 | 684 | 0.0 | 574 |
| Msa1083800 | AT5G41120.1 | 46.429 | 616 | 320 | 5 | 87 | 699 | 71 | 679 | 0.0 | 568 |
| Msa1083800 | AT3G02030.1 | 47.164 | 617 | 312 | 7 | 87 | 699 | 54 | 660 | 0.0 | 566 |
| Msa1083800 | AT5G41130.3 | 45.342 | 644 | 319 | 4 | 87 | 699 | 70 | 711 | 0.0 | 562 |
| Msa1083800 | AT5G41130.2 | 46.009 | 639 | 317 | 6 | 87 | 699 | 70 | 706 | 0.0 | 561 |
| Msa1083800 | AT5G41120.2 | 45.729 | 597 | 321 | 3 | 104 | 699 | 6 | 600 | 0.0 | 537 |
| Msa1083800 | AT3G26820.1 | 45.888 | 608 | 289 | 6 | 96 | 699 | 61 | 632 | 2.93e-167 | 494 |
| Msa1083800 | AT3G26820.2 | 44.466 | 524 | 253 | 4 | 96 | 616 | 61 | 549 | 4.06e-143 | 430 |
Find 185 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAAAATCCGTATCTTTA+AGG | 0.153897 | 7_2:-84113160 | Msa1083800:CDS |
| CCACTGGAAATGACAGATTT+TGG | 0.182916 | 7_2:+84110589 | None:intergenic |
| ACGAGATAAATTGGCTTCTT+TGG | 0.195096 | 7_2:+84114364 | None:intergenic |
| TGATCTGTTTACAGGAAAAT+TGG | 0.200570 | 7_2:-84111685 | Msa1083800:CDS |
| ATTTCTTCTTAGTTTCATTA+TGG | 0.233368 | 7_2:-84114061 | Msa1083800:CDS |
| TTTATGTAATCATAATTATT+TGG | 0.242013 | 7_2:-84110277 | Msa1083800:three_prime_UTR |
| CTATCAATTAAATTCCTATA+AGG | 0.256262 | 7_2:+84110396 | None:intergenic |
| ATCAAACTTGCAAATATCTT+TGG | 0.258010 | 7_2:+84115778 | None:intergenic |
| CGAGATAAATTGGCTTCTTT+GGG | 0.258614 | 7_2:+84114365 | None:intergenic |
| TTTCACTTGCCGTTCATTCA+TGG | 0.261252 | 7_2:-84116083 | Msa1083800:exon |
| AAAGATGATGCACCTTAAAA+TGG | 0.279230 | 7_2:+84111523 | None:intergenic |
| ATTCATGGCTTCAGCAATAA+TGG | 0.279843 | 7_2:-84116068 | Msa1083800:exon |
| GCTGCCATTCTCACAAATTC+TGG | 0.282965 | 7_2:+84111163 | None:intergenic |
| TCCATGCCTTTCATTCTTAT+AGG | 0.291334 | 7_2:+84110522 | None:intergenic |
| GTGAAGAATACAAATTGTTT+TGG | 0.302991 | 7_2:-84111195 | Msa1083800:CDS |
| CTTATAGGAATTTAATTGAT+AGG | 0.310563 | 7_2:-84110395 | Msa1083800:CDS |
| GCAACCATTGTTACCTATCT+TGG | 0.312735 | 7_2:-84114118 | Msa1083800:CDS |
| GCCCATCCTGATCTGTTTAC+AGG | 0.312976 | 7_2:-84111693 | Msa1083800:CDS |
| CAATGGGCACACCCTTCTTT+TGG | 0.314196 | 7_2:-84113136 | Msa1083800:intron |
| TTTCTTCTTAGTTTCATTAT+GGG | 0.316075 | 7_2:-84114060 | Msa1083800:intron |
| TTATCATGTATGAATGTATA+TGG | 0.317283 | 7_2:+84116175 | None:intergenic |
| TACCAAAGGACACTCTTCTT+TGG | 0.317894 | 7_2:-84113471 | Msa1083800:CDS |
| GAATCGCCGACGAGATAAAT+TGG | 0.330647 | 7_2:+84114355 | None:intergenic |
| ATTGATTGGGTGAAGGTATT+CGG | 0.331739 | 7_2:-84111636 | Msa1083800:CDS |
| AATTGATAGGAAAATGTATC+AGG | 0.341683 | 7_2:-84110382 | Msa1083800:CDS |
| AGATTATTTCGTTCTGTTAC+CGG | 0.342350 | 7_2:-84111885 | Msa1083800:CDS |
| GGGATGGATGGCACTGGATC+GGG | 0.349194 | 7_2:-84115078 | Msa1083800:CDS |
| GAGGATGGAAAGATAGTAAA+AGG | 0.351214 | 7_2:-84111840 | Msa1083800:CDS |
| AAAAGATTGCTTGCTGAAAC+AGG | 0.353843 | 7_2:+84111606 | None:intergenic |
| CATTAGTCAATATCGAAAAT+AGG | 0.354831 | 7_2:-84113839 | Msa1083800:CDS |
| GCTTCAGCAATAATGGGTTT+TGG | 0.356044 | 7_2:-84116061 | Msa1083800:CDS |
| ACAGTTACATGTAGTTCTTC+AGG | 0.357831 | 7_2:+84114087 | None:intergenic |
| AAAGATATTTGCAAGTTTGA+TGG | 0.365945 | 7_2:-84115776 | Msa1083800:CDS |
| AAAGGAGAAACACATTCAAT+TGG | 0.374022 | 7_2:+84115731 | None:intergenic |
| ATATCTGAATTCTGTCATAC+TGG | 0.375380 | 7_2:+84112599 | None:intergenic |
| GGTGCCACGATTGTGCCATT+TGG | 0.379938 | 7_2:-84111133 | Msa1083800:CDS |
| AGTTGTTCAATTATCTTTGT+AGG | 0.381783 | 7_2:+84113810 | None:intergenic |
| TATCTCGTCGGCGATTCCTT+AGG | 0.386203 | 7_2:-84114349 | Msa1083800:CDS |
| TTCATGGCTTCAGCAATAAT+GGG | 0.387693 | 7_2:-84116067 | Msa1083800:CDS |
| AGAGGGAGGAGGATCCTTAT+AGG | 0.391376 | 7_2:-84110410 | Msa1083800:CDS |
| ACTTAATCTGCAGGTACAAT+TGG | 0.394476 | 7_2:+84110469 | None:intergenic |
| TTGACACCACTTTGGGATGA+TGG | 0.400001 | 7_2:-84115839 | Msa1083800:CDS |
| AATGAAGCTCAAAGACTTGC+GGG | 0.401301 | 7_2:-84113195 | Msa1083800:CDS |
| CTGAGGTAATCGCTGACAAC+TGG | 0.411724 | 7_2:+84110753 | None:intergenic |
| AGTTGGGTTGACACCACTTT+GGG | 0.412258 | 7_2:-84115846 | Msa1083800:CDS |
| ATAATGAAACTAAGAAGAAA+TGG | 0.413027 | 7_2:+84114063 | None:intergenic |
| ATCGAGACTCGGTTAAGATT+AGG | 0.419884 | 7_2:-84110722 | Msa1083800:intron |
| AGTAAGAATGAAGAACAAGT+TGG | 0.420093 | 7_2:-84115863 | Msa1083800:CDS |
| CTCACAAATTCTGGATGATC+AGG | 0.424559 | 7_2:+84111172 | None:intergenic |
| TCAGGCAAAGCCTCCAAGAT+AGG | 0.439168 | 7_2:+84114105 | None:intergenic |
| AGGGATGGATGGCACTGGAT+CGG | 0.439257 | 7_2:-84115079 | Msa1083800:CDS |
| ACATAAGGGTGGGAGAATCT+TGG | 0.440128 | 7_2:+84115708 | None:intergenic |
| CTGAAGTACTTGTGCTTGCT+AGG | 0.441839 | 7_2:-84113387 | Msa1083800:intron |
| CATACTTGGCAAGAGCTTGA+TGG | 0.448253 | 7_2:+84115043 | None:intergenic |
| GAGAGCCTCACGTGCACCAC+CGG | 0.449620 | 7_2:+84111545 | None:intergenic |
| TTCCAAAGAAGAGTGTCCTT+TGG | 0.451205 | 7_2:+84113469 | None:intergenic |
| TTGACTAATGCCATCTTCAA+TGG | 0.453847 | 7_2:+84113852 | None:intergenic |
| TCCGTATCTTTAAGGACAAT+GGG | 0.454445 | 7_2:-84113152 | Msa1083800:CDS |
| AATGGTGTTCGATCATGAAC+AGG | 0.454903 | 7_2:+84114833 | None:intergenic |
| CCCACCCTTATGTTTCTACC+TGG | 0.455529 | 7_2:-84115698 | Msa1083800:intron |
| CGTCGGTTATCACATGTTGA+TGG | 0.455926 | 7_2:-84111781 | Msa1083800:CDS |
| CCACTTTGGGATGATGGGTA+TGG | 0.460295 | 7_2:-84115833 | Msa1083800:CDS |
| GAAGGAACCTTACCGTTCAA+TGG | 0.464192 | 7_2:+84115929 | None:intergenic |
| CATGATCGAACACCATTTGA+AGG | 0.467533 | 7_2:-84114827 | Msa1083800:intron |
| GTGAGAATGGCAGCACGATT+CGG | 0.472364 | 7_2:-84111154 | Msa1083800:CDS |
| ACTTACCAGGTAGAAACATA+AGG | 0.474260 | 7_2:+84115693 | None:intergenic |
| GTAAGAATGAAGAACAAGTT+GGG | 0.477693 | 7_2:-84115862 | Msa1083800:CDS |
| AAGATAGTAAAAGGTCTGTC+TGG | 0.479324 | 7_2:-84111831 | Msa1083800:CDS |
| ATCCGTATCTTTAAGGACAA+TGG | 0.480139 | 7_2:-84113153 | Msa1083800:CDS |
| GAGCGGCAACGGCGAGTGCA+AGG | 0.490514 | 7_2:+84114320 | None:intergenic |
| CTGTCTGGTGTTCCAGATGA+AGG | 0.491069 | 7_2:-84111816 | Msa1083800:CDS |
| AATAAGACAGGACCTTCATC+TGG | 0.491280 | 7_2:+84111804 | None:intergenic |
| ACCATTGTTACCTATCTTGG+AGG | 0.492576 | 7_2:-84114115 | Msa1083800:CDS |
| GACATGGCAGCAATGAAGTA+AGG | 0.493972 | 7_2:+84113778 | None:intergenic |
| GCCCATTGTCCTTAAAGATA+CGG | 0.494183 | 7_2:+84113151 | None:intergenic |
| ATGAAGGCAACAAATAGAAA+AGG | 0.494795 | 7_2:+84116270 | None:intergenic |
| TCAACCACAGCTACATCCTT+CGG | 0.496112 | 7_2:-84114153 | Msa1083800:intron |
| CACGTGCACCACCGGGATAT+AGG | 0.496494 | 7_2:+84111553 | None:intergenic |
| TCATCCAGAATTTGTGAGAA+TGG | 0.497949 | 7_2:-84111167 | Msa1083800:CDS |
| ATCTGTGATGTTCTCTACAT+TGG | 0.498726 | 7_2:-84111862 | Msa1083800:CDS |
| TATGCAATGGATCGACTAGT+TGG | 0.500299 | 7_2:-84112579 | Msa1083800:CDS |
| TCCATTGTATATATAAATGA+AGG | 0.500794 | 7_2:+84110195 | None:intergenic |
| GTCGGTTATCACATGTTGAT+GGG | 0.500850 | 7_2:-84111780 | Msa1083800:CDS |
| ATTGGGTGAAGGTATTCGGC+GGG | 0.507706 | 7_2:-84111632 | Msa1083800:CDS |
| TGACACCACTTTGGGATGAT+GGG | 0.508012 | 7_2:-84115838 | Msa1083800:CDS |
| TCTTTGAGCTTCATTTACAC+TGG | 0.509924 | 7_2:+84113203 | None:intergenic |
| TTAATTATTGCAGGGATGGA+TGG | 0.511467 | 7_2:-84115090 | Msa1083800:intron |
| TTCTATGATTGATTGGGTGA+AGG | 0.512581 | 7_2:-84111643 | Msa1083800:CDS |
| TGGAAGCTGATTAATATATG+TGG | 0.514540 | 7_2:-84110257 | Msa1083800:three_prime_UTR |
| CTCGTCGGCGATTCCTTAGG+TGG | 0.519484 | 7_2:-84114346 | Msa1083800:CDS |
| CAGAAGGGTATTGCTCTTCG+TGG | 0.519495 | 7_2:-84111720 | Msa1083800:CDS |
| AAGGAGAAACACATTCAATT+GGG | 0.520927 | 7_2:+84115732 | None:intergenic |
| TCCTGTAAACAGATCAGGAT+GGG | 0.520965 | 7_2:+84111692 | None:intergenic |
| ATGCAATGGATCGACTAGTT+GGG | 0.523954 | 7_2:-84112578 | Msa1083800:intron |
| CGTTGGATTACGAGCGGCAA+CGG | 0.525743 | 7_2:+84114309 | None:intergenic |
| CTTTGAGCTTCATTTACACT+GGG | 0.527339 | 7_2:+84113204 | None:intergenic |
| CCGTTGCACATACCAAAAGA+AGG | 0.527342 | 7_2:+84113124 | None:intergenic |
| ATCAGGTGATCCATTGAAGA+TGG | 0.530726 | 7_2:-84113862 | Msa1083800:intron |
| TATCTGAATTCTGTCATACT+GGG | 0.531731 | 7_2:+84112600 | None:intergenic |
| TCCTTCATTTATATATACAA+TGG | 0.531906 | 7_2:-84110196 | Msa1083800:three_prime_UTR |
| TGTTCAATTATCTTTGTAGG+AGG | 0.532418 | 7_2:+84113813 | None:intergenic |
| ATCTGATCCATTGAACGGTA+AGG | 0.532947 | 7_2:-84115936 | Msa1083800:CDS |
| AAGTTGGGTTGACACCACTT+TGG | 0.533670 | 7_2:-84115847 | Msa1083800:CDS |
| CTTGCATGTACCGTCGTACA+AGG | 0.535922 | 7_2:-84112653 | Msa1083800:CDS |
| AGATGAATTTCTAAGTCAGA+AGG | 0.538688 | 7_2:-84111736 | Msa1083800:CDS |
| CACTTTGGGATGATGGGTAT+GGG | 0.540619 | 7_2:-84115832 | Msa1083800:CDS |
| TGTAGAGAACATCACAGATC+CGG | 0.544185 | 7_2:+84111866 | None:intergenic |
| GTTCAATTATCTTTGTAGGA+GGG | 0.544418 | 7_2:+84113814 | None:intergenic |
| GACAGAATTCAGATATGCAA+TGG | 0.548861 | 7_2:-84112592 | Msa1083800:CDS |
| GAGTGCAAGGCATCCACCTA+AGG | 0.552903 | 7_2:+84114333 | None:intergenic |
| AGATGAGAACAGTGGAGAGG+TGG | 0.553794 | 7_2:-84110616 | Msa1083800:CDS |
| GGGAAGCCTATAAGAATGAA+AGG | 0.554340 | 7_2:-84110528 | Msa1083800:CDS |
| TGGTCTTCTAACGATCATCA+AGG | 0.556220 | 7_2:-84112679 | Msa1083800:CDS |
| TTAGTAGAAAGCAATAAAGA+AGG | 0.556541 | 7_2:+84115911 | None:intergenic |
| CAACTTCAGACTTAATCTGC+AGG | 0.561313 | 7_2:+84110460 | None:intergenic |
| GAAACTATGTACTAAAACAT+GGG | 0.564538 | 7_2:+84116234 | None:intergenic |
| GCCTATAAGAATGAAAGGCA+TGG | 0.566613 | 7_2:-84110523 | Msa1083800:CDS |
| TGTGATGTTCTCTACATTGG+AGG | 0.567193 | 7_2:-84111859 | Msa1083800:CDS |
| AATCATGCCTCCTTGTACGA+CGG | 0.569230 | 7_2:+84112643 | None:intergenic |
| ATTGTGCCATTTGGAGCTGT+AGG | 0.569928 | 7_2:-84111124 | Msa1083800:CDS |
| GAAGGTCCTGTCTTATTCGT+CGG | 0.569980 | 7_2:-84111798 | Msa1083800:CDS |
| TCTTCGCCTACAGCTCCAAA+TGG | 0.571096 | 7_2:+84111118 | None:intergenic |
| ATTGCAGGGATGGATGGCAC+TGG | 0.577418 | 7_2:-84115084 | Msa1083800:intron |
| TATCATGTATGAATGTATAT+GGG | 0.582186 | 7_2:+84116176 | None:intergenic |
| GATATTTGCAAGTTTGATGG+TGG | 0.583362 | 7_2:-84115773 | Msa1083800:CDS |
| ATGTACTAAAACATGGGATG+AGG | 0.583820 | 7_2:+84116240 | None:intergenic |
| ATATCCCGGTGGTGCACGTG+AGG | 0.584040 | 7_2:-84111550 | Msa1083800:CDS |
| AGAGCCTCACGTGCACCACC+GGG | 0.584102 | 7_2:+84111546 | None:intergenic |
| GATGAATTTCTAAGTCAGAA+GGG | 0.585083 | 7_2:-84111735 | Msa1083800:CDS |
| CCAAAATCTGTCATTTCCAG+TGG | 0.585774 | 7_2:-84110589 | Msa1083800:CDS |
| TGAAACTATGTACTAAAACA+TGG | 0.592714 | 7_2:+84116233 | None:intergenic |
| CTTGATCAAGAAGAGGGAGG+AGG | 0.593122 | 7_2:-84110421 | Msa1083800:CDS |
| GAGATAAATTGGCTTCTTTG+GGG | 0.596702 | 7_2:+84114366 | None:intergenic |
| CAGAGATGTTAATCGAGACT+CGG | 0.599945 | 7_2:-84110733 | Msa1083800:CDS |
| TTGCTGAAGCCATGAATGAA+CGG | 0.600837 | 7_2:+84116074 | None:intergenic |
| TCTCACGTTCTCCTATATCC+CGG | 0.601456 | 7_2:-84111564 | Msa1083800:CDS |
| AGAAGGGTATTGCTCTTCGT+GGG | 0.601779 | 7_2:-84111719 | Msa1083800:CDS |
| GGAAGCTGATTAATATATGT+GGG | 0.602768 | 7_2:-84110256 | Msa1083800:three_prime_UTR |
| GCCTCCAAGATAGGTAACAA+TGG | 0.604258 | 7_2:+84114114 | None:intergenic |
| CTTACCAGGTAGAAACATAA+GGG | 0.606155 | 7_2:+84115694 | None:intergenic |
| CGTTGCCGCTCGTAATCCAA+CGG | 0.606482 | 7_2:-84114308 | Msa1083800:CDS |
| TAGATTACTTGATCAAGAAG+AGG | 0.608659 | 7_2:-84110428 | Msa1083800:CDS |
| AAATGAAGCTCAAAGACTTG+CGG | 0.609451 | 7_2:-84113196 | Msa1083800:CDS |
| TGATAACCGACGAATAAGAC+AGG | 0.610814 | 7_2:+84111792 | None:intergenic |
| GATTGGGTGAAGGTATTCGG+CGG | 0.612723 | 7_2:-84111633 | Msa1083800:CDS |
| TTGGGCAAAACCAACGTGGT+GGG | 0.613322 | 7_2:+84115750 | None:intergenic |
| GAGCTTGATGGTGCAAAGAG+AGG | 0.616096 | 7_2:+84115055 | None:intergenic |
| AAGGAGGCATGATTTAGTCA+TGG | 0.617280 | 7_2:-84112634 | Msa1083800:CDS |
| TCTGAATCTGATCCATTGAA+CGG | 0.618967 | 7_2:-84115941 | Msa1083800:CDS |
| AGATTACTTGATCAAGAAGA+GGG | 0.618969 | 7_2:-84110427 | Msa1083800:CDS |
| CGTTGCACATACCAAAAGAA+GGG | 0.620448 | 7_2:+84113125 | None:intergenic |
| TCTGAATTCTGTCATACTGG+GGG | 0.623747 | 7_2:+84112602 | None:intergenic |
| ACTGGTGAAACTTGTTGAAG+AGG | 0.624233 | 7_2:-84114413 | Msa1083800:CDS |
| AAGAAGCCAATTTATCTCGT+CGG | 0.625584 | 7_2:-84114361 | Msa1083800:CDS |
| ATGTTCTCTACATTGGAGGA+TGG | 0.631466 | 7_2:-84111855 | Msa1083800:CDS |
| CCAGGTAGAAACATAAGGGT+GGG | 0.632821 | 7_2:+84115698 | None:intergenic |
| ATAAGTACTAGATCAACCGT+TGG | 0.633799 | 7_2:+84114292 | None:intergenic |
| ATCTGAATTCTGTCATACTG+GGG | 0.633994 | 7_2:+84112601 | None:intergenic |
| GGTCTTCTAACGATCATCAA+GGG | 0.637267 | 7_2:-84112678 | Msa1083800:CDS |
| AAGCTTCTTACTGGAAGACA+TGG | 0.639687 | 7_2:+84113762 | None:intergenic |
| AGCTCCAAATGGCACAATCG+TGG | 0.641288 | 7_2:+84111129 | None:intergenic |
| ACCAGGTAGAAACATAAGGG+TGG | 0.642032 | 7_2:+84115697 | None:intergenic |
| ATTGGGCAAAACCAACGTGG+TGG | 0.642947 | 7_2:+84115749 | None:intergenic |
| CCATACCCATCATCCCAAAG+TGG | 0.645222 | 7_2:+84115833 | None:intergenic |
| TTGATGGTGGCCCACCACGT+TGG | 0.645750 | 7_2:-84115760 | Msa1083800:CDS |
| GCTGGCTAATATCATACCAA+AGG | 0.651536 | 7_2:-84113485 | Msa1083800:CDS |
| TTCCTGTAAACAGATCAGGA+TGG | 0.656474 | 7_2:+84111691 | None:intergenic |
| CAGAGATGAGAACAGTGGAG+AGG | 0.661717 | 7_2:-84110619 | Msa1083800:CDS |
| CACGTTCTCCTATATCCCGG+TGG | 0.663360 | 7_2:-84111561 | Msa1083800:CDS |
| GGGATGAGGAGCGAAAATGA+AGG | 0.664816 | 7_2:+84116254 | None:intergenic |
| AGGGTGGGAGAATCTTGGAA+AGG | 0.665715 | 7_2:+84115713 | None:intergenic |
| CAAATAGAAAAGGAAAAGCG+TGG | 0.669973 | 7_2:+84116280 | None:intergenic |
| GTAGTGCAGGAAGATTGCAT+TGG | 0.671325 | 7_2:-84112699 | Msa1083800:intron |
| ATCAACCGTTGGATTACGAG+CGG | 0.673740 | 7_2:+84114303 | None:intergenic |
| CTGAATTCTGTCATACTGGG+GGG | 0.675485 | 7_2:+84112603 | None:intergenic |
| AATAGATAGTAAAATCGACC+CGG | 0.684620 | 7_2:+84110552 | None:intergenic |
| TTACTTGATCAAGAAGAGGG+AGG | 0.689781 | 7_2:-84110424 | Msa1083800:CDS |
| ACCTTCAGAGATGAGAACAG+TGG | 0.690993 | 7_2:-84110624 | Msa1083800:intron |
| GAGTGATAAAGAAAATTACA+CGG | 0.706796 | 7_2:-84116382 | None:intergenic |
| AGCTGATTAATATATGTGGG+TGG | 0.722184 | 7_2:-84110253 | Msa1083800:three_prime_UTR |
| TTGGGTGAAGGTATTCGGCG+GGG | 0.728287 | 7_2:-84111631 | Msa1083800:CDS |
| TCAATTGGGCAAAACCAACG+TGG | 0.730520 | 7_2:+84115746 | None:intergenic |
| AGTCTCGATTAACATCTCTG+AGG | 0.732349 | 7_2:+84110736 | None:intergenic |
| GCATGTACCGTCGTACAAGG+AGG | 0.733690 | 7_2:-84112650 | Msa1083800:CDS |
| TTGCAACTGAGATCTACCGA+AGG | 0.733953 | 7_2:+84114137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTTTTTTTTTTTTTTGA+AGG | + | chr7_2:84111596-84111615 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTAACTCAAAAT+AGG | + | chr7_2:84114334-84114353 | None:intergenic | 10.0% |
| !! | TTTATGTAATCATAATTATT+TGG | - | chr7_2:84116282-84116301 | Msa1083800:five_prime_UTR | 10.0% |
| !! | ATTAAAAAGTTATAGAATTG+AGG | + | chr7_2:84110985-84111004 | None:intergenic | 15.0% |
| !! | CATAAAATCAAAAAACAAAA+AGG | + | chr7_2:84112122-84112141 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTGATTTTATGT+AGG | - | chr7_2:84112123-84112142 | Msa1083800:intron | 15.0% |
| !! | TAAAAACTACTACAAAATAA+GGG | + | chr7_2:84112927-84112946 | None:intergenic | 15.0% |
| !!! | ATACTAATATTGTGTATTTT+TGG | - | chr7_2:84113222-84113241 | Msa1083800:CDS | 15.0% |
| !!! | TACTAATATTGTGTATTTTT+GGG | - | chr7_2:84113223-84113242 | Msa1083800:CDS | 15.0% |
| !! | TTCCTTAATTAATTAAAGAT+TGG | - | chr7_2:84114206-84114225 | Msa1083800:intron | 15.0% |
| !! | TCTAACTATATAAAATCAAA+TGG | - | chr7_2:84114602-84114621 | Msa1083800:intron | 15.0% |
| !! | AATATTACAAAGAAAATGTA+AGG | + | chr7_2:84115102-84115121 | None:intergenic | 15.0% |
| !! | TGATTGTACTAAATAAAAAA+TGG | - | chr7_2:84116335-84116354 | Msa1083800:five_prime_UTR | 15.0% |
| !! | TATCATGTATGAATGTATAT+GGG | + | chr7_2:84110386-84110405 | None:intergenic | 20.0% |
| !! | TTATCATGTATGAATGTATA+TGG | + | chr7_2:84110387-84110406 | None:intergenic | 20.0% |
| !! | AAAATTAAGAAAGTTTGTAG+TGG | - | chr7_2:84111144-84111163 | Msa1083800:CDS | 20.0% |
| !! | AAATAATGTAGTTGAAGATT+GGG | - | chr7_2:84111360-84111379 | Msa1083800:intron | 20.0% |
| !! | AAAAAAAAAGTTTATTGTGC+TGG | - | chr7_2:84111603-84111622 | Msa1083800:CDS | 20.0% |
| !! | AACGTAAATATGATAATTAG+AGG | + | chr7_2:84111667-84111686 | None:intergenic | 20.0% |
| !!! | TGATGATGCATTTAATTATT+AGG | - | chr7_2:84111814-84111833 | Msa1083800:CDS | 20.0% |
| !! | CATTTAATTATTAGGACATT+TGG | - | chr7_2:84111822-84111841 | Msa1083800:CDS | 20.0% |
| !! | GAATATGCAAGTTTATTTAT+CGG | - | chr7_2:84111951-84111970 | Msa1083800:intron | 20.0% |
| !!! | TTCAAATTTGCTTAAGTTTT+GGG | + | chr7_2:84111992-84112011 | None:intergenic | 20.0% |
| !! | AAAGAATTATTATCATGCTA+CGG | + | chr7_2:84112378-84112397 | None:intergenic | 20.0% |
| !! | ATAATGAAACTAAGAAGAAA+TGG | + | chr7_2:84112499-84112518 | None:intergenic | 20.0% |
| !! | ATTTCTTCTTAGTTTCATTA+TGG | - | chr7_2:84112498-84112517 | Msa1083800:intron | 20.0% |
| !! | TTTCTTCTTAGTTTCATTAT+GGG | - | chr7_2:84112499-84112518 | Msa1083800:intron | 20.0% |
| !!! | CTTTTCCATTTACATTTTTA+TGG | - | chr7_2:84112551-84112570 | Msa1083800:intron | 20.0% |
| !! | TATCACCATAAAAATGTAAA+TGG | + | chr7_2:84112559-84112578 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCATTATGAG+TGG | - | chr7_2:84112644-84112663 | Msa1083800:CDS | 20.0% |
| !! | TTATACAATTTCATATCATC+AGG | - | chr7_2:84112680-84112699 | Msa1083800:CDS | 20.0% |
| !! | ACACACTTACAAAATTATAA+AGG | - | chr7_2:84112864-84112883 | Msa1083800:intron | 20.0% |
| !!! | AAATTATAAAGGTACTTTGT+TGG | - | chr7_2:84112875-84112894 | Msa1083800:intron | 20.0% |
| !! | ATACTTAAAAACAGTTAAGA+GGG | + | chr7_2:84112904-84112923 | None:intergenic | 20.0% |
| !! | CTAAAAACTACTACAAAATA+AGG | + | chr7_2:84112928-84112947 | None:intergenic | 20.0% |
| !! | AAAATGATAGATGAAAAAGA+AGG | + | chr7_2:84112957-84112976 | None:intergenic | 20.0% |
| !! | TTTAAATAAATGTCGATGAT+AGG | + | chr7_2:84113476-84113495 | None:intergenic | 20.0% |
| !! | ATATTTAGCAAGCATAATAT+TGG | + | chr7_2:84114019-84114038 | None:intergenic | 20.0% |
| !! | CACCAATCTTTAATTAATTA+AGG | + | chr7_2:84114211-84114230 | None:intergenic | 20.0% |
| !! | TCCTATAAATTATAATGTCA+GGG | - | chr7_2:84115342-84115361 | Msa1083800:intron | 20.0% |
| !! | CTATCAATTAAATTCCTATA+AGG | + | chr7_2:84116166-84116185 | None:intergenic | 20.0% |
| !! | CTTATAGGAATTTAATTGAT+AGG | - | chr7_2:84116164-84116183 | Msa1083800:five_prime_UTR | 20.0% |
| !!! | TTTCTATCAACAAATTTTCA+GGG | + | chr7_2:84116244-84116263 | None:intergenic | 20.0% |
| !!! | ATTTCTATCAACAAATTTTC+AGG | + | chr7_2:84116245-84116264 | None:intergenic | 20.0% |
| !! | TCCTTCATTTATATATACAA+TGG | - | chr7_2:84116363-84116382 | Msa1083800:five_prime_UTR | 20.0% |
| !! | TCCATTGTATATATAAATGA+AGG | + | chr7_2:84116367-84116386 | None:intergenic | 20.0% |
| ! | GAAACTATGTACTAAAACAT+GGG | + | chr7_2:84110328-84110347 | None:intergenic | 25.0% |
| ! | TGAAACTATGTACTAAAACA+TGG | + | chr7_2:84110329-84110348 | None:intergenic | 25.0% |
| !!! | TCTTCTTTGAGAATGTTTTA+TGG | + | chr7_2:84110541-84110560 | None:intergenic | 25.0% |
| ! | TTAGTAGAAAGCAATAAAGA+AGG | + | chr7_2:84110651-84110670 | None:intergenic | 25.0% |
| ! | ATCAAACTTGCAAATATCTT+TGG | + | chr7_2:84110784-84110803 | None:intergenic | 25.0% |
| ! | AAAGATATTTGCAAGTTTGA+TGG | - | chr7_2:84110783-84110802 | Msa1083800:CDS | 25.0% |
| ! | GAAATAATGTAGTTGAAGAT+TGG | - | chr7_2:84111359-84111378 | Msa1083800:intron | 25.0% |
| !!! | TCAAATTTGCTTAAGTTTTG+GGG | + | chr7_2:84111991-84112010 | None:intergenic | 25.0% |
| !!! | GTTCAAATTTGCTTAAGTTT+TGG | + | chr7_2:84111993-84112012 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTATGTAGGAC+TGG | - | chr7_2:84112128-84112147 | Msa1083800:intron | 25.0% |
| !!! | CAAATTTGTTCGCATTTTAT+CGG | - | chr7_2:84112335-84112354 | Msa1083800:intron | 25.0% |
| !!! | AAATTTGTTCGCATTTTATC+GGG | - | chr7_2:84112336-84112355 | Msa1083800:intron | 25.0% |
| ! | TAATTCTCTTGCAATTGTTA+TGG | - | chr7_2:84112579-84112598 | Msa1083800:CDS | 25.0% |
| ! | CATTAGTCAATATCGAAAAT+AGG | - | chr7_2:84112720-84112739 | Msa1083800:intron | 25.0% |
| ! | AGTTGTTCAATTATCTTTGT+AGG | + | chr7_2:84112752-84112771 | None:intergenic | 25.0% |
| ! | TAATATCAAAAGCTTCTTAC+TGG | + | chr7_2:84112809-84112828 | None:intergenic | 25.0% |
| ! | TTAATTTACCTCCTAAACTT+TGG | - | chr7_2:84112837-84112856 | Msa1083800:intron | 25.0% |
| ! | GATACTTAAAAACAGTTAAG+AGG | + | chr7_2:84112905-84112924 | None:intergenic | 25.0% |
| !! | TTTCATCTATCATTTTCCTT+TGG | - | chr7_2:84112961-84112980 | Msa1083800:intron | 25.0% |
| !!! | TTGAGACATTACTTTTAAGT+TGG | - | chr7_2:84113269-84113288 | Msa1083800:intron | 25.0% |
| !!! | TTAAGTTGGTTTTCTCAAAT+TGG | - | chr7_2:84113283-84113302 | Msa1083800:intron | 25.0% |
| !!! | TAAGTTGGTTTTCTCAAATT+GGG | - | chr7_2:84113284-84113303 | Msa1083800:intron | 25.0% |
| ! | TCGAAATCACAAATGATATT+AGG | + | chr7_2:84113510-84113529 | None:intergenic | 25.0% |
| !! | ACAATCTTTTCAATTTCTGT+TGG | - | chr7_2:84113590-84113609 | Msa1083800:intron | 25.0% |
| ! | TAAAACCGTGTAATAAGAAA+AGG | + | chr7_2:84113758-84113777 | None:intergenic | 25.0% |
| ! | CAAGAAAAATCAATGTTAAC+TGG | + | chr7_2:84114112-84114131 | None:intergenic | 25.0% |
| ! | AAGGTTCAATGATACAAAAT+CGG | + | chr7_2:84114247-84114266 | None:intergenic | 25.0% |
| ! | TCTGAAGAACTATATATAGA+AGG | + | chr7_2:84114266-84114285 | None:intergenic | 25.0% |
| !! | TGAGTTTTCTATGATTGATT+GGG | - | chr7_2:84114910-84114929 | Msa1083800:intron | 25.0% |
| !!! | GTAATCGTATTTTTTATCCA+CGG | - | chr7_2:84115065-84115084 | Msa1083800:CDS | 25.0% |
| ! | TTCTCTATACTTTATAGTGT+TGG | - | chr7_2:84115146-84115165 | Msa1083800:intron | 25.0% |
| ! | CAAAAAATAGTACATAGAGA+AGG | + | chr7_2:84115245-84115264 | None:intergenic | 25.0% |
| ! | CTCCTATAAATTATAATGTC+AGG | - | chr7_2:84115341-84115360 | Msa1083800:intron | 25.0% |
| ! | ACCCTGACATTATAATTTAT+AGG | + | chr7_2:84115346-84115365 | None:intergenic | 25.0% |
| !! | GTGAAGAATACAAATTGTTT+TGG | - | chr7_2:84115364-84115383 | Msa1083800:intron | 25.0% |
| ! | GAACATTTGGTATATCTAAT+TGG | - | chr7_2:84115727-84115746 | Msa1083800:CDS | 25.0% |
| !!! | GTCGATTTTACTATCTATTT+GGG | - | chr7_2:84116011-84116030 | Msa1083800:CDS | 25.0% |
| ! | AATTGATAGGAAAATGTATC+AGG | - | chr7_2:84116177-84116196 | Msa1083800:five_prime_UTR | 25.0% |
| !! | ATCATTTTCAGAAGGATATA+AGG | + | chr7_2:84116203-84116222 | None:intergenic | 25.0% |
| !!! | ATTTTCAGGGTTTAAATGTT+GGG | + | chr7_2:84116231-84116250 | None:intergenic | 25.0% |
| !!! | AATTTTCAGGGTTTAAATGT+TGG | + | chr7_2:84116232-84116251 | None:intergenic | 25.0% |
| ATGAAGGCAACAAATAGAAA+AGG | + | chr7_2:84110292-84110311 | None:intergenic | 30.0% | |
| !! | AGAATGTTTTATGGTGGAAA+TGG | + | chr7_2:84110532-84110551 | None:intergenic | 30.0% |
| !! | TCTTTGAGAATGTTTTATGG+TGG | + | chr7_2:84110538-84110557 | None:intergenic | 30.0% |
| AGTAAGAATGAAGAACAAGT+TGG | - | chr7_2:84110696-84110715 | Msa1083800:intron | 30.0% | |
| GTAAGAATGAAGAACAAGTT+GGG | - | chr7_2:84110697-84110716 | Msa1083800:intron | 30.0% | |
| AAGGAGAAACACATTCAATT+GGG | + | chr7_2:84110830-84110849 | None:intergenic | 30.0% | |
| AAAGGAGAAACACATTCAAT+TGG | + | chr7_2:84110831-84110850 | None:intergenic | 30.0% | |
| TGTTTGCGTTTAATTATTGC+AGG | - | chr7_2:84111460-84111479 | Msa1083800:intron | 30.0% | |
| GTTTGCGTTTAATTATTGCA+GGG | - | chr7_2:84111461-84111480 | Msa1083800:intron | 30.0% | |
| ! | ATATTTACGTTTTGCACAAC+AGG | - | chr7_2:84111676-84111695 | Msa1083800:CDS | 30.0% |
| AAAAAGCAAAGACCTTCAAA+TGG | + | chr7_2:84111747-84111766 | None:intergenic | 30.0% | |
| GTTTATATTGTGTCGAAAGT+AGG | - | chr7_2:84111919-84111938 | Msa1083800:intron | 30.0% | |
| !!! | AAATTTGCTTAAGTTTTGGG+GGG | + | chr7_2:84111989-84112008 | None:intergenic | 30.0% |
| !! | CAAATTTGCTTAAGTTTTGG+GGG | + | chr7_2:84111990-84112009 | None:intergenic | 30.0% |
| TTAGTAGCACACAATAATCA+TGG | + | chr7_2:84112067-84112086 | None:intergenic | 30.0% | |
| !!! | GTACTTATTTTAGTCAATCC+TGG | - | chr7_2:84112282-84112301 | Msa1083800:intron | 30.0% |
| TAAGCAAGACATGAAATAAG+AGG | + | chr7_2:84112612-84112631 | None:intergenic | 30.0% | |
| GTTCAATTATCTTTGTAGGA+GGG | + | chr7_2:84112748-84112767 | None:intergenic | 30.0% | |
| TGTTCAATTATCTTTGTAGG+AGG | + | chr7_2:84112749-84112768 | None:intergenic | 30.0% | |
| TGAACTTGTAAGAATTTGTC+TGG | + | chr7_2:84112995-84113014 | None:intergenic | 30.0% | |
| TTGCAAAATCCGTATCTTTA+AGG | - | chr7_2:84113399-84113418 | Msa1083800:CDS | 30.0% | |
| ! | TTTTCAATTTCTGTTGGAAC+AGG | - | chr7_2:84113596-84113615 | Msa1083800:intron | 30.0% |
| TTTGAGGAGTAAACACTAAA+GGG | + | chr7_2:84113629-84113648 | None:intergenic | 30.0% | |
| AGATTACATAGGCTGTAAAT+CGG | + | chr7_2:84113794-84113813 | None:intergenic | 30.0% | |
| GTTATCACAGAAGATTACAT+AGG | + | chr7_2:84113805-84113824 | None:intergenic | 30.0% | |
| TATCTGAATTCTGTCATACT+GGG | + | chr7_2:84113962-84113981 | None:intergenic | 30.0% | |
| ATATCTGAATTCTGTCATAC+TGG | + | chr7_2:84113963-84113982 | None:intergenic | 30.0% | |
| AAAATCAATGTTAACTGGAG+AGG | + | chr7_2:84114107-84114126 | None:intergenic | 30.0% | |
| GGAAAAGTAAAACAGAACAA+TGG | + | chr7_2:84114190-84114209 | None:intergenic | 30.0% | |
| TCAATGATACAAAATCGGAT+AGG | + | chr7_2:84114242-84114261 | None:intergenic | 30.0% | |
| AGATTATTTCGTTCTGTTAC+CGG | - | chr7_2:84114674-84114693 | Msa1083800:intron | 30.0% | |
| AGATGAATTTCTAAGTCAGA+AGG | - | chr7_2:84114823-84114842 | Msa1083800:intron | 30.0% | |
| GATGAATTTCTAAGTCAGAA+GGG | - | chr7_2:84114824-84114843 | Msa1083800:intron | 30.0% | |
| ! | AATTTTCCTGTAAACAGATC+AGG | + | chr7_2:84114875-84114894 | None:intergenic | 30.0% |
| TGATCTGTTTACAGGAAAAT+TGG | - | chr7_2:84114874-84114893 | Msa1083800:intron | 30.0% | |
| ! | CTGAGTTTTCTATGATTGAT+TGG | - | chr7_2:84114909-84114928 | Msa1083800:intron | 30.0% |
| AAAGATGATGCACCTTAAAA+TGG | + | chr7_2:84115039-84115058 | None:intergenic | 30.0% | |
| GTAAGGATATAAAATAACCG+TGG | + | chr7_2:84115085-84115104 | None:intergenic | 30.0% | |
| !!! | TATAGTGTTGGTTAGTTTTG+TGG | - | chr7_2:84115158-84115177 | Msa1083800:intron | 30.0% |
| ! | CATGAACTGTTATTTGATGA+TGG | - | chr7_2:84115305-84115324 | Msa1083800:intron | 30.0% |
| TCAACATATGCATCTATGAT+CGG | + | chr7_2:84115591-84115610 | None:intergenic | 30.0% | |
| ! | GATGCATATGTTGAATGTTT+TGG | - | chr7_2:84115597-84115616 | Msa1083800:intron | 30.0% |
| !! | AAAATAATCAAGCCTTGTTG+TGG | - | chr7_2:84115696-84115715 | Msa1083800:intron | 30.0% |
| AATAGATAGTAAAATCGACC+CGG | + | chr7_2:84116010-84116029 | None:intergenic | 30.0% | |
| !! | GGTCGATTTTACTATCTATT+TGG | - | chr7_2:84116010-84116029 | Msa1083800:CDS | 30.0% |
| TAGATTACTTGATCAAGAAG+AGG | - | chr7_2:84116131-84116150 | Msa1083800:five_prime_UTR | 30.0% | |
| AGATTACTTGATCAAGAAGA+GGG | - | chr7_2:84116132-84116151 | Msa1083800:five_prime_UTR | 30.0% | |
| !! | TTTTCAGGGTTTAAATGTTG+GGG | + | chr7_2:84116230-84116249 | None:intergenic | 30.0% |
| TGGAAGCTGATTAATATATG+TGG | - | chr7_2:84116302-84116321 | Msa1083800:five_prime_UTR | 30.0% | |
| GGAAGCTGATTAATATATGT+GGG | - | chr7_2:84116303-84116322 | Msa1083800:five_prime_UTR | 30.0% | |
| CAAATAGAAAAGGAAAAGCG+TGG | + | chr7_2:84110282-84110301 | None:intergenic | 35.0% | |
| ATGTACTAAAACATGGGATG+AGG | + | chr7_2:84110322-84110341 | None:intergenic | 35.0% | |
| ATTCATGGCTTCAGCAATAA+TGG | - | chr7_2:84110491-84110510 | Msa1083800:CDS | 35.0% | |
| TTCATGGCTTCAGCAATAAT+GGG | - | chr7_2:84110492-84110511 | Msa1083800:CDS | 35.0% | |
| TCTGAATCTGATCCATTGAA+CGG | - | chr7_2:84110618-84110637 | Msa1083800:CDS | 35.0% | |
| GATATTTGCAAGTTTGATGG+TGG | - | chr7_2:84110786-84110805 | Msa1083800:CDS | 35.0% | |
| CTTACCAGGTAGAAACATAA+GGG | + | chr7_2:84110868-84110887 | None:intergenic | 35.0% | |
| ACTTACCAGGTAGAAACATA+AGG | + | chr7_2:84110869-84110888 | None:intergenic | 35.0% | |
| TCAACAAGCTCTTATATCGA+GGG | + | chr7_2:84111114-84111133 | None:intergenic | 35.0% | |
| TTAATTATTGCAGGGATGGA+TGG | - | chr7_2:84111469-84111488 | Msa1083800:intron | 35.0% | |
| ! | GAGATAAATTGGCTTCTTTG+GGG | + | chr7_2:84112196-84112215 | None:intergenic | 35.0% |
| ! | CGAGATAAATTGGCTTCTTT+GGG | + | chr7_2:84112197-84112216 | None:intergenic | 35.0% |
| ! | ACGAGATAAATTGGCTTCTT+TGG | + | chr7_2:84112198-84112217 | None:intergenic | 35.0% |
| AAGAAGCCAATTTATCTCGT+CGG | - | chr7_2:84112198-84112217 | Msa1083800:intron | 35.0% | |
| ATAAGTACTAGATCAACCGT+TGG | + | chr7_2:84112270-84112289 | None:intergenic | 35.0% | |
| TGCGAACAAATTTGACAGAA+AGG | + | chr7_2:84112329-84112348 | None:intergenic | 35.0% | |
| ACAGTTACATGTAGTTCTTC+AGG | + | chr7_2:84112475-84112494 | None:intergenic | 35.0% | |
| TTGACTAATGCCATCTTCAA+TGG | + | chr7_2:84112710-84112729 | None:intergenic | 35.0% | |
| AGTGTGTGTTACCAAAGTTT+AGG | + | chr7_2:84112851-84112870 | None:intergenic | 35.0% | |
| TTGTCTGGAAAATAGACCAA+AGG | + | chr7_2:84112980-84112999 | None:intergenic | 35.0% | |
| TTACTCTCTGATCTATTGTC+AGG | - | chr7_2:84113050-84113069 | Msa1083800:intron | 35.0% | |
| TGACAAAGTTTCCTTTCTAG+TGG | - | chr7_2:84113316-84113335 | Msa1083800:intron | 35.0% | |
| TGTTATCATTGCCACTAGAA+AGG | + | chr7_2:84113330-84113349 | None:intergenic | 35.0% | |
| CTTTGAGCTTCATTTACACT+GGG | + | chr7_2:84113358-84113377 | None:intergenic | 35.0% | |
| TCTTTGAGCTTCATTTACAC+TGG | + | chr7_2:84113359-84113378 | None:intergenic | 35.0% | |
| AAATGAAGCTCAAAGACTTG+CGG | - | chr7_2:84113363-84113382 | Msa1083800:intron | 35.0% | |
| ! | ATCCGTATCTTTAAGGACAA+TGG | - | chr7_2:84113406-84113425 | Msa1083800:CDS | 35.0% |
| ! | TCCGTATCTTTAAGGACAAT+GGG | - | chr7_2:84113407-84113426 | Msa1083800:CDS | 35.0% |
| CTGATCAATCAAAACACTGT+TGG | + | chr7_2:84113552-84113571 | None:intergenic | 35.0% | |
| ! | TTGATCAGTCTCCTTTAAAG+TGG | - | chr7_2:84113564-84113583 | Msa1083800:intron | 35.0% |
| ! | AAGATTGTTCGCCACTTTAA+AGG | + | chr7_2:84113578-84113597 | None:intergenic | 35.0% |
| TTGAGGAGTAAACACTAAAG+GGG | + | chr7_2:84113628-84113647 | None:intergenic | 35.0% | |
| GTTTGAGGAGTAAACACTAA+AGG | + | chr7_2:84113630-84113649 | None:intergenic | 35.0% | |
| TCCTCAAACATGATTGTCTT+CGG | - | chr7_2:84113641-84113660 | Msa1083800:intron | 35.0% | |
| CACTGTTTAACATTGCAGTA+TGG | - | chr7_2:84113718-84113737 | Msa1083800:intron | 35.0% | |
| !!! | GCTAGCCTTTTCTTATTACA+CGG | - | chr7_2:84113750-84113769 | Msa1083800:intron | 35.0% |
| TTGATTAATTGTGCTCTGCA+TGG | - | chr7_2:84113838-84113857 | Msa1083800:CDS | 35.0% | |
| ATCTGAATTCTGTCATACTG+GGG | + | chr7_2:84113961-84113980 | None:intergenic | 35.0% | |
| GACAGAATTCAGATATGCAA+TGG | - | chr7_2:84113967-84113986 | Msa1083800:intron | 35.0% | |
| !! | TTGCAAACTGCCTTTTGTTT+TGG | - | chr7_2:84114355-84114374 | Msa1083800:CDS | 35.0% |
| !!! | GCCTTTTGTTTTGGAAAAGA+CGG | - | chr7_2:84114364-84114383 | Msa1083800:CDS | 35.0% |
| ! | TCCGTCTTTTCCAAAACAAA+AGG | + | chr7_2:84114368-84114387 | None:intergenic | 35.0% |
| GATAACCATCGTGATGTATT+CGG | - | chr7_2:84114413-84114432 | Msa1083800:CDS | 35.0% | |
| ATAACCATCGTGATGTATTC+GGG | - | chr7_2:84114414-84114433 | Msa1083800:CDS | 35.0% | |
| GAACTGATTGAGTGATATAG+AGG | - | chr7_2:84114515-84114534 | Msa1083800:intron | 35.0% | |
| ! | AGGCTCTAATGATACAAAAC+CGG | - | chr7_2:84114535-84114554 | Msa1083800:intron | 35.0% |
| TCTAATGATACAAAACCGGA+AGG | - | chr7_2:84114539-84114558 | Msa1083800:intron | 35.0% | |
| ACTGGTATGTAACTAACGAA+TGG | - | chr7_2:84114564-84114583 | Msa1083800:intron | 35.0% | |
| GTATGTAACTAACGAATGGA+AGG | - | chr7_2:84114568-84114587 | Msa1083800:intron | 35.0% | |
| ATCTGTGATGTTCTCTACAT+TGG | - | chr7_2:84114697-84114716 | Msa1083800:intron | 35.0% | |
| GAGGATGGAAAGATAGTAAA+AGG | - | chr7_2:84114719-84114738 | Msa1083800:intron | 35.0% | |
| AAGATAGTAAAAGGTCTGTC+TGG | - | chr7_2:84114728-84114747 | Msa1083800:intron | 35.0% | |
| TTCTATGATTGATTGGGTGA+AGG | - | chr7_2:84114916-84114935 | Msa1083800:intron | 35.0% | |
| !! | ATTGATTGGGTGAAGGTATT+CGG | - | chr7_2:84114923-84114942 | Msa1083800:intron | 35.0% |
| ! | AAAAGATTGCTTGCTGAAAC+AGG | + | chr7_2:84114956-84114975 | None:intergenic | 35.0% |
| GATCTCTAAGTTTGACATGT+AGG | + | chr7_2:84115283-84115302 | None:intergenic | 35.0% | |
| TCATCCAGAATTTGTGAGAA+TGG | - | chr7_2:84115392-84115411 | Msa1083800:intron | 35.0% | |
| TCCATGCCTTTCATTCTTAT+AGG | + | chr7_2:84116040-84116059 | None:intergenic | 35.0% | |
| ACTTAATCTGCAGGTACAAT+TGG | + | chr7_2:84116093-84116112 | None:intergenic | 35.0% | |
| AGCTGATTAATATATGTGGG+TGG | - | chr7_2:84116306-84116325 | Msa1083800:five_prime_UTR | 35.0% | |
| TTTCACTTGCCGTTCATTCA+TGG | - | chr7_2:84110476-84110495 | Msa1083800:CDS | 40.0% | |
| TTGCTGAAGCCATGAATGAA+CGG | + | chr7_2:84110488-84110507 | None:intergenic | 40.0% | |
| !!! | GCTTCAGCAATAATGGGTTT+TGG | - | chr7_2:84110498-84110517 | Msa1083800:CDS | 40.0% |
| ATCTGATCCATTGAACGGTA+AGG | - | chr7_2:84110623-84110642 | Msa1083800:intron | 40.0% | |
| ! | GAGCAAAGTTGTTACTTACC+AGG | + | chr7_2:84110882-84110901 | None:intergenic | 40.0% |
| TATATCGAGGGACGAAGTAA+CGG | + | chr7_2:84111102-84111121 | None:intergenic | 40.0% | |
| GTCAACAAGCTCTTATATCG+AGG | + | chr7_2:84111115-84111134 | None:intergenic | 40.0% | |
| GTTGAAGATTGGGAAGATGT+AGG | - | chr7_2:84111370-84111389 | Msa1083800:intron | 40.0% | |
| GCGTTTAATTATTGCAGGGA+TGG | - | chr7_2:84111465-84111484 | Msa1083800:intron | 40.0% | |
| ACAACACAACACAGCATACT+TGG | + | chr7_2:84111533-84111552 | None:intergenic | 40.0% | |
| AATGGTGTTCGATCATGAAC+AGG | + | chr7_2:84111729-84111748 | None:intergenic | 40.0% | |
| CATGATCGAACACCATTTGA+AGG | - | chr7_2:84111732-84111751 | Msa1083800:CDS | 40.0% | |
| !! | ACTGGTGAAACTTGTTGAAG+AGG | - | chr7_2:84112146-84112165 | Msa1083800:intron | 40.0% |
| GCAACCATTGTTACCTATCT+TGG | - | chr7_2:84112441-84112460 | Msa1083800:intron | 40.0% | |
| ACCATTGTTACCTATCTTGG+AGG | - | chr7_2:84112444-84112463 | Msa1083800:intron | 40.0% | |
| ATCAGGTGATCCATTGAAGA+TGG | - | chr7_2:84112697-84112716 | Msa1083800:intron | 40.0% | |
| AAGCTTCTTACTGGAAGACA+TGG | + | chr7_2:84112800-84112819 | None:intergenic | 40.0% | |
| GTGTGTTACCAAAGTTTAGG+AGG | + | chr7_2:84112848-84112867 | None:intergenic | 40.0% | |
| GCTGGCTAATATCATACCAA+AGG | - | chr7_2:84113074-84113093 | Msa1083800:intron | 40.0% | |
| TACCAAAGGACACTCTTCTT+TGG | - | chr7_2:84113088-84113107 | Msa1083800:intron | 40.0% | |
| !! | TTCCAAAGAAGAGTGTCCTT+TGG | + | chr7_2:84113093-84113112 | None:intergenic | 40.0% |
| AATGAAGCTCAAAGACTTGC+GGG | - | chr7_2:84113364-84113383 | Msa1083800:intron | 40.0% | |
| GCCCATTGTCCTTAAAGATA+CGG | + | chr7_2:84113411-84113430 | None:intergenic | 40.0% | |
| CGTTGCACATACCAAAAGAA+GGG | + | chr7_2:84113437-84113456 | None:intergenic | 40.0% | |
| ! | CCTTCTTTTGGTATGTGCAA+CGG | - | chr7_2:84113435-84113454 | Msa1083800:CDS | 40.0% |
| ACCGAAGACAATCATGTTTG+AGG | + | chr7_2:84113645-84113664 | None:intergenic | 40.0% | |
| CAAACATGATTGTCTTCGGT+AGG | - | chr7_2:84113645-84113664 | Msa1083800:intron | 40.0% | |
| ! | GATTGTCTTCGGTAGGATTT+TGG | - | chr7_2:84113652-84113671 | Msa1083800:intron | 40.0% |
| CATTGCAGTATGGTATGAAC+TGG | - | chr7_2:84113728-84113747 | Msa1083800:intron | 40.0% | |
| TGGTCTTCTAACGATCATCA+AGG | - | chr7_2:84113880-84113899 | Msa1083800:intron | 40.0% | |
| GGTCTTCTAACGATCATCAA+GGG | - | chr7_2:84113881-84113900 | Msa1083800:intron | 40.0% | |
| ! | AAGGAGGCATGATTTAGTCA+TGG | - | chr7_2:84113925-84113944 | Msa1083800:intron | 40.0% |
| TCTGAATTCTGTCATACTGG+GGG | + | chr7_2:84113960-84113979 | None:intergenic | 40.0% | |
| TATGCAATGGATCGACTAGT+TGG | - | chr7_2:84113980-84113999 | Msa1083800:intron | 40.0% | |
| ! | ATGCAATGGATCGACTAGTT+GGG | - | chr7_2:84113981-84114000 | Msa1083800:intron | 40.0% |
| TATCTTTAAGCCCACTACCA+GGG | + | chr7_2:84114397-84114416 | None:intergenic | 40.0% | |
| TTATCTTTAAGCCCACTACC+AGG | + | chr7_2:84114398-84114417 | None:intergenic | 40.0% | |
| GTATTCGGGATCAATGTTGT+CGG | - | chr7_2:84114428-84114447 | Msa1083800:intron | 40.0% | |
| TATTCGGGATCAATGTTGTC+GGG | - | chr7_2:84114429-84114448 | Msa1083800:intron | 40.0% | |
| TGTAGAGAACATCACAGATC+CGG | + | chr7_2:84114696-84114715 | None:intergenic | 40.0% | |
| TGTGATGTTCTCTACATTGG+AGG | - | chr7_2:84114700-84114719 | Msa1083800:intron | 40.0% | |
| ATGTTCTCTACATTGGAGGA+TGG | - | chr7_2:84114704-84114723 | Msa1083800:intron | 40.0% | |
| AATAAGACAGGACCTTCATC+TGG | + | chr7_2:84114758-84114777 | None:intergenic | 40.0% | |
| TGATAACCGACGAATAAGAC+AGG | + | chr7_2:84114770-84114789 | None:intergenic | 40.0% | |
| GTCGGTTATCACATGTTGAT+GGG | - | chr7_2:84114779-84114798 | Msa1083800:intron | 40.0% | |
| TCCTGTAAACAGATCAGGAT+GGG | + | chr7_2:84114870-84114889 | None:intergenic | 40.0% | |
| TTCCTGTAAACAGATCAGGA+TGG | + | chr7_2:84114871-84114890 | None:intergenic | 40.0% | |
| CTCACAAATTCTGGATGATC+AGG | + | chr7_2:84115390-84115409 | None:intergenic | 40.0% | |
| TGTGGAGAGGAATGAACATT+TGG | - | chr7_2:84115714-84115733 | Msa1083800:CDS | 40.0% | |
| AGTCTCGATTAACATCTCTG+AGG | + | chr7_2:84115826-84115845 | None:intergenic | 40.0% | |
| CAGAGATGTTAATCGAGACT+CGG | - | chr7_2:84115826-84115845 | Msa1083800:CDS | 40.0% | |
| ! | ATCGAGACTCGGTTAAGATT+AGG | - | chr7_2:84115837-84115856 | Msa1083800:CDS | 40.0% |
| ! | CCACTGGAAATGACAGATTT+TGG | + | chr7_2:84115973-84115992 | None:intergenic | 40.0% |
| ! | CCAAAATCTGTCATTTCCAG+TGG | - | chr7_2:84115970-84115989 | Msa1083800:CDS | 40.0% |
| ! | AGTGGTTCTACCAAAAATGC+CGG | - | chr7_2:84115988-84116007 | Msa1083800:CDS | 40.0% |
| ! | TAAAATCGACCCGGCATTTT+TGG | + | chr7_2:84116001-84116020 | None:intergenic | 40.0% |
| GGGAAGCCTATAAGAATGAA+AGG | - | chr7_2:84116031-84116050 | Msa1083800:CDS | 40.0% | |
| GCCTATAAGAATGAAAGGCA+TGG | - | chr7_2:84116036-84116055 | Msa1083800:CDS | 40.0% | |
| CAACTTCAGACTTAATCTGC+AGG | + | chr7_2:84116102-84116121 | None:intergenic | 40.0% | |
| TTACTTGATCAAGAAGAGGG+AGG | - | chr7_2:84116135-84116154 | Msa1083800:five_prime_UTR | 40.0% | |
| ! | GGGGTTTGATCATTTTCAGA+AGG | + | chr7_2:84116211-84116230 | None:intergenic | 40.0% |
| GAAGGAACCTTACCGTTCAA+TGG | + | chr7_2:84110633-84110652 | None:intergenic | 45.0% | |
| !! | AAGTTGGGTTGACACCACTT+TGG | - | chr7_2:84110712-84110731 | Msa1083800:intron | 45.0% |
| !! | AGTTGGGTTGACACCACTTT+GGG | - | chr7_2:84110713-84110732 | Msa1083800:intron | 45.0% |
| !! | TTGACACCACTTTGGGATGA+TGG | - | chr7_2:84110720-84110739 | Msa1083800:intron | 45.0% |
| !! | TGACACCACTTTGGGATGAT+GGG | - | chr7_2:84110721-84110740 | Msa1083800:intron | 45.0% |
| !! | CACTTTGGGATGATGGGTAT+GGG | - | chr7_2:84110727-84110746 | Msa1083800:CDS | 45.0% |
| TCAATTGGGCAAAACCAACG+TGG | + | chr7_2:84110816-84110835 | None:intergenic | 45.0% | |
| ACATAAGGGTGGGAGAATCT+TGG | + | chr7_2:84110854-84110873 | None:intergenic | 45.0% | |
| CCAGGTAGAAACATAAGGGT+GGG | + | chr7_2:84110864-84110883 | None:intergenic | 45.0% | |
| ACCAGGTAGAAACATAAGGG+TGG | + | chr7_2:84110865-84110884 | None:intergenic | 45.0% | |
| GATTGGGAAGATGTAGGAGA+AGG | - | chr7_2:84111376-84111395 | Msa1083800:intron | 45.0% | |
| CATACTTGGCAAGAGCTTGA+TGG | + | chr7_2:84111519-84111538 | None:intergenic | 45.0% | |
| GAATCGCCGACGAGATAAAT+TGG | + | chr7_2:84112207-84112226 | None:intergenic | 45.0% | |
| ATCAACCGTTGGATTACGAG+CGG | + | chr7_2:84112259-84112278 | None:intergenic | 45.0% | |
| ACAACACTGATAGACTCACC+AGG | + | chr7_2:84112303-84112322 | None:intergenic | 45.0% | |
| AGGATGTAGCTGTGGTTGAA+AGG | + | chr7_2:84112405-84112424 | None:intergenic | 45.0% | |
| TCAACCACAGCTACATCCTT+CGG | - | chr7_2:84112406-84112425 | Msa1083800:intron | 45.0% | |
| TTGCAACTGAGATCTACCGA+AGG | + | chr7_2:84112425-84112444 | None:intergenic | 45.0% | |
| GCCTCCAAGATAGGTAACAA+TGG | + | chr7_2:84112448-84112467 | None:intergenic | 45.0% | |
| GACATGGCAGCAATGAAGTA+AGG | + | chr7_2:84112784-84112803 | None:intergenic | 45.0% | |
| TCTGATCTATTGTCAGGAGC+TGG | - | chr7_2:84113056-84113075 | Msa1083800:intron | 45.0% | |
| ! | CTGAAGTACTTGTGCTTGCT+AGG | - | chr7_2:84113172-84113191 | Msa1083800:CDS | 45.0% |
| CCGTTGCACATACCAAAAGA+AGG | + | chr7_2:84113438-84113457 | None:intergenic | 45.0% | |
| GTAGTGCAGGAAGATTGCAT+TGG | - | chr7_2:84113860-84113879 | Msa1083800:CDS | 45.0% | |
| AATCATGCCTCCTTGTACGA+CGG | + | chr7_2:84113919-84113938 | None:intergenic | 45.0% | |
| CTGAATTCTGTCATACTGGG+GGG | + | chr7_2:84113959-84113978 | None:intergenic | 45.0% | |
| ATCTTTAAGCCCACTACCAG+GGG | + | chr7_2:84114396-84114415 | None:intergenic | 45.0% | |
| TGATCCCGAATACATCACGA+TGG | + | chr7_2:84114421-84114440 | None:intergenic | 45.0% | |
| ATACAAAACCGGAAGGCTAC+TGG | - | chr7_2:84114546-84114565 | Msa1083800:intron | 45.0% | |
| GTTACATACCAGTAGCCTTC+CGG | + | chr7_2:84114557-84114576 | None:intergenic | 45.0% | |
| ! | GAAGGTCCTGTCTTATTCGT+CGG | - | chr7_2:84114761-84114780 | Msa1083800:intron | 45.0% |
| ! | CGTCGGTTATCACATGTTGA+TGG | - | chr7_2:84114778-84114797 | Msa1083800:intron | 45.0% |
| !! | AGAAGGGTATTGCTCTTCGT+GGG | - | chr7_2:84114840-84114859 | Msa1083800:CDS | 45.0% |
| TCTCACGTTCTCCTATATCC+CGG | - | chr7_2:84114995-84115014 | Msa1083800:intron | 45.0% | |
| ! | ACGTGAGGCTCTCCATTTTA+AGG | - | chr7_2:84115024-84115043 | Msa1083800:intron | 45.0% |
| GCTGCCATTCTCACAAATTC+TGG | + | chr7_2:84115399-84115418 | None:intergenic | 45.0% | |
| !! | ATTGTGCCATTTGGAGCTGT+AGG | - | chr7_2:84115435-84115454 | Msa1083800:intron | 45.0% |
| !! | AATCAAGCCTTGTTGTGGAG+AGG | - | chr7_2:84115701-84115720 | Msa1083800:CDS | 45.0% |
| GTTCATTCCTCTCCACAACA+AGG | + | chr7_2:84115711-84115730 | None:intergenic | 45.0% | |
| ACCTTCAGAGATGAGAACAG+TGG | - | chr7_2:84115935-84115954 | Msa1083800:CDS | 45.0% | |
| TCCACTGTTCTCATCTCTGA+AGG | + | chr7_2:84115939-84115958 | None:intergenic | 45.0% | |
| !!! | GGCATTTTTGGTAGAACCAC+TGG | + | chr7_2:84115989-84116008 | None:intergenic | 45.0% |
| ! | GTGGTTCTACCAAAAATGCC+GGG | - | chr7_2:84115989-84116008 | Msa1083800:CDS | 45.0% |
| !!! | TACTATAATATTTTTAATTA+AGG | + | chr7_2:84111337-84111356 | None:intergenic | 5.0% |
| GGGATGAGGAGCGAAAATGA+AGG | + | chr7_2:84110308-84110327 | None:intergenic | 50.0% | |
| CCATACCCATCATCCCAAAG+TGG | + | chr7_2:84110729-84110748 | None:intergenic | 50.0% | |
| !! | CCACTTTGGGATGATGGGTA+TGG | - | chr7_2:84110726-84110745 | Msa1083800:CDS | 50.0% |
| TTGGGCAAAACCAACGTGGT+GGG | + | chr7_2:84110812-84110831 | None:intergenic | 50.0% | |
| ATTGGGCAAAACCAACGTGG+TGG | + | chr7_2:84110813-84110832 | None:intergenic | 50.0% | |
| AGGGTGGGAGAATCTTGGAA+AGG | + | chr7_2:84110849-84110868 | None:intergenic | 50.0% | |
| ! | CCCACCCTTATGTTTCTACC+TGG | - | chr7_2:84110861-84110880 | Msa1083800:intron | 50.0% |
| !! | GAGCTTGATGGTGCAAAGAG+AGG | + | chr7_2:84111507-84111526 | None:intergenic | 50.0% |
| TATCTCGTCGGCGATTCCTT+AGG | - | chr7_2:84112210-84112229 | Msa1083800:intron | 50.0% | |
| TCTACCGAAGGATGTAGCTG+TGG | + | chr7_2:84112413-84112432 | None:intergenic | 50.0% | |
| TCAGGCAAAGCCTCCAAGAT+AGG | + | chr7_2:84112457-84112476 | None:intergenic | 50.0% | |
| ! | CAATGGGCACACCCTTCTTT+TGG | - | chr7_2:84113423-84113442 | Msa1083800:CDS | 50.0% |
| CTTGCATGTACCGTCGTACA+AGG | - | chr7_2:84113906-84113925 | Msa1083800:intron | 50.0% | |
| ATTCTGTCATACTGGGGGGA+AGG | + | chr7_2:84113955-84113974 | None:intergenic | 50.0% | |
| GAAAAGACGGAAATCACCCC+TGG | - | chr7_2:84114377-84114396 | Msa1083800:CDS | 50.0% | |
| CTGTCTGGTGTTCCAGATGA+AGG | - | chr7_2:84114743-84114762 | Msa1083800:intron | 50.0% | |
| !! | CAGAAGGGTATTGCTCTTCG+TGG | - | chr7_2:84114839-84114858 | Msa1083800:CDS | 50.0% |
| GCCCATCCTGATCTGTTTAC+AGG | - | chr7_2:84114866-84114885 | Msa1083800:intron | 50.0% | |
| !! | GATTGGGTGAAGGTATTCGG+CGG | - | chr7_2:84114926-84114945 | Msa1083800:intron | 50.0% |
| !! | ATTGGGTGAAGGTATTCGGC+GGG | - | chr7_2:84114927-84114946 | Msa1083800:intron | 50.0% |
| GTGAGAATGGCAGCACGATT+CGG | - | chr7_2:84115405-84115424 | Msa1083800:intron | 50.0% | |
| AGCTCCAAATGGCACAATCG+TGG | + | chr7_2:84115433-84115452 | None:intergenic | 50.0% | |
| TCTTCGCCTACAGCTCCAAA+TGG | + | chr7_2:84115444-84115463 | None:intergenic | 50.0% | |
| CTGAGGTAATCGCTGACAAC+TGG | + | chr7_2:84115809-84115828 | None:intergenic | 50.0% | |
| CAGAGATGAGAACAGTGGAG+AGG | - | chr7_2:84115940-84115959 | Msa1083800:CDS | 50.0% | |
| AGATGAGAACAGTGGAGAGG+TGG | - | chr7_2:84115943-84115962 | Msa1083800:CDS | 50.0% | |
| CTTGATCAAGAAGAGGGAGG+AGG | - | chr7_2:84116138-84116157 | Msa1083800:five_prime_UTR | 50.0% | |
| AGAGGGAGGAGGATCCTTAT+AGG | - | chr7_2:84116149-84116168 | Msa1083800:five_prime_UTR | 50.0% | |
| CGAGGGACGAAGTAACGGTA+CGG | + | chr7_2:84111097-84111116 | None:intergenic | 55.0% | |
| ATTGCAGGGATGGATGGCAC+TGG | - | chr7_2:84111475-84111494 | Msa1083800:intron | 55.0% | |
| ! | AGGGATGGATGGCACTGGAT+CGG | - | chr7_2:84111480-84111499 | Msa1083800:intron | 55.0% |
| ! | GAGTGCAAGGCATCCACCTA+AGG | + | chr7_2:84112229-84112248 | None:intergenic | 55.0% |
| CGTTGGATTACGAGCGGCAA+CGG | + | chr7_2:84112253-84112272 | None:intergenic | 55.0% | |
| CGTTGCCGCTCGTAATCCAA+CGG | - | chr7_2:84112251-84112270 | Msa1083800:intron | 55.0% | |
| ! | TGTGCTCTGCATGGTAGTGC+AGG | - | chr7_2:84113847-84113866 | Msa1083800:CDS | 55.0% |
| GCATGTACCGTCGTACAAGG+AGG | - | chr7_2:84113909-84113928 | Msa1083800:intron | 55.0% | |
| ACGGAAATCACCCCTGGTAG+TGG | - | chr7_2:84114383-84114402 | Msa1083800:CDS | 55.0% | |
| CGGAAATCACCCCTGGTAGT+GGG | - | chr7_2:84114384-84114403 | Msa1083800:CDS | 55.0% | |
| !! | TTGGGTGAAGGTATTCGGCG+GGG | - | chr7_2:84114928-84114947 | Msa1083800:intron | 55.0% |
| CACGTTCTCCTATATCCCGG+TGG | - | chr7_2:84114998-84115017 | Msa1083800:intron | 55.0% | |
| ! | GGTGCCACGATTGTGCCATT+TGG | - | chr7_2:84115426-84115445 | Msa1083800:intron | 55.0% |
| !! | TTGATGGTGGCCCACCACGT+TGG | - | chr7_2:84110799-84110818 | Msa1083800:intron | 60.0% |
| ! | GGGATGGATGGCACTGGATC+GGG | - | chr7_2:84111481-84111500 | Msa1083800:intron | 60.0% |
| CTCGTCGGCGATTCCTTAGG+TGG | - | chr7_2:84112213-84112232 | Msa1083800:intron | 60.0% | |
| CACGTGCACCACCGGGATAT+AGG | + | chr7_2:84115009-84115028 | None:intergenic | 60.0% | |
| ATATCCCGGTGGTGCACGTG+AGG | - | chr7_2:84115009-84115028 | Msa1083800:intron | 60.0% | |
| AGAGCCTCACGTGCACCACC+GGG | + | chr7_2:84115016-84115035 | None:intergenic | 65.0% | |
| GAGAGCCTCACGTGCACCAC+CGG | + | chr7_2:84115017-84115036 | None:intergenic | 65.0% | |
| GAGCGGCAACGGCGAGTGCA+AGG | + | chr7_2:84112242-84112261 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84110187 | 84116394 | 84110187 | ID=Msa1083800;Name=Msa1083800 |
| chr7_2 | mRNA | 84110187 | 84116394 | 84110187 | ID=Msa1083800-mRNA-1;Parent=Msa1083800;Name=Msa1083800-mRNA-1;_AED=0.14;_eAED=0.14;_QI=308|1|1|1|1|1|13|148|701 |
| chr7_2 | exon | 84110187 | 84110638 | 84110187 | ID=Msa1083800-mRNA-1:exon:22399;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84110723 | 84110808 | 84110723 | ID=Msa1083800-mRNA-1:exon:22398;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84111105 | 84111218 | 84111105 | ID=Msa1083800-mRNA-1:exon:22397;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84111536 | 84111905 | 84111536 | ID=Msa1083800-mRNA-1:exon:22396;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84112579 | 84112712 | 84112579 | ID=Msa1083800-mRNA-1:exon:22395;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84113137 | 84113245 | 84113137 | ID=Msa1083800-mRNA-1:exon:22394;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84113388 | 84113509 | 84113388 | ID=Msa1083800-mRNA-1:exon:22393;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84113773 | 84113879 | 84113773 | ID=Msa1083800-mRNA-1:exon:22392;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84114061 | 84114165 | 84114061 | ID=Msa1083800-mRNA-1:exon:22391;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84114278 | 84114436 | 84114278 | ID=Msa1083800-mRNA-1:exon:22390;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84114828 | 84114883 | 84114828 | ID=Msa1083800-mRNA-1:exon:22389;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84115048 | 84115099 | 84115048 | ID=Msa1083800-mRNA-1:exon:22388;Parent=Msa1083800-mRNA-1 |
| chr7_2 | exon | 84115699 | 84116394 | 84115699 | ID=Msa1083800-mRNA-1:exon:22387;Parent=Msa1083800-mRNA-1 |
| chr7_2 | five_prime_UTR | 84116087 | 84116394 | 84116087 | ID=Msa1083800-mRNA-1:five_prime_utr;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84115699 | 84116086 | 84115699 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84115048 | 84115099 | 84115048 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84114828 | 84114883 | 84114828 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84114278 | 84114436 | 84114278 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84114061 | 84114165 | 84114061 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84113773 | 84113879 | 84113773 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84113388 | 84113509 | 84113388 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84113137 | 84113245 | 84113137 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84112579 | 84112712 | 84112579 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84111536 | 84111905 | 84111536 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84111105 | 84111218 | 84111105 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84110723 | 84110808 | 84110723 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | CDS | 84110335 | 84110638 | 84110335 | ID=Msa1083800-mRNA-1:cds;Parent=Msa1083800-mRNA-1 |
| chr7_2 | three_prime_UTR | 84110187 | 84110334 | 84110187 | ID=Msa1083800-mRNA-1:three_prime_utr;Parent=Msa1083800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
