Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388650 | XP_003626371.2 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388650 | sp|Q9ZVN2|PES1_ARATH | 65.815 | 626 | 208 | 4 | 79 | 701 | 82 | 704 | 0.0 | 861 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388650 | G7L0R8 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1083800 | Msa1388650 | 0.977807 | 1.591243e-144 | -8.615850e-47 |
| Msa1129080 | Msa1388650 | 0.998953 | 2.525811e-283 | -8.615850e-47 |
| Msa0575380 | Msa1388650 | -0.815042 | 1.131835e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388650 | MtrunA17_Chr7g0273621 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1387 |
| Msa1388650 | MtrunA17_Chr7g0251571 | 53.106 | 644 | 286 | 5 | 60 | 700 | 66 | 696 | 0.0 | 689 |
| Msa1388650 | MtrunA17_Chr7g0251541 | 50.920 | 652 | 300 | 5 | 51 | 700 | 37 | 670 | 0.0 | 663 |
| Msa1388650 | MtrunA17_Chr7g0251561 | 45.710 | 606 | 259 | 5 | 131 | 699 | 4 | 576 | 3.37e-178 | 521 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388650 | AT1G54570.1 | 65.815 | 626 | 208 | 4 | 79 | 701 | 82 | 704 | 0.0 | 861 |
| Msa1388650 | AT3G26840.1 | 47.239 | 652 | 327 | 6 | 62 | 699 | 51 | 699 | 0.0 | 584 |
| Msa1388650 | AT3G02030.2 | 47.812 | 617 | 312 | 6 | 87 | 699 | 54 | 664 | 0.0 | 579 |
| Msa1388650 | AT5G41130.1 | 47.240 | 616 | 320 | 3 | 87 | 699 | 70 | 683 | 0.0 | 577 |
| Msa1388650 | AT5G41120.3 | 46.104 | 616 | 327 | 3 | 87 | 699 | 71 | 684 | 0.0 | 575 |
| Msa1388650 | AT5G41120.1 | 46.429 | 616 | 320 | 5 | 87 | 699 | 71 | 679 | 0.0 | 569 |
| Msa1388650 | AT3G02030.1 | 47.164 | 617 | 312 | 7 | 87 | 699 | 54 | 660 | 0.0 | 567 |
| Msa1388650 | AT5G41130.3 | 45.186 | 644 | 320 | 4 | 87 | 699 | 70 | 711 | 0.0 | 561 |
| Msa1388650 | AT5G41130.2 | 45.853 | 639 | 318 | 6 | 87 | 699 | 70 | 706 | 0.0 | 561 |
| Msa1388650 | AT5G41120.2 | 45.729 | 597 | 321 | 3 | 104 | 699 | 6 | 600 | 0.0 | 536 |
| Msa1388650 | AT3G26820.1 | 45.724 | 608 | 290 | 6 | 96 | 699 | 61 | 632 | 5.79e-167 | 494 |
| Msa1388650 | AT3G26820.2 | 44.275 | 524 | 254 | 4 | 96 | 616 | 61 | 549 | 1.08e-142 | 429 |
Find 185 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAAAATCCGTATCTTTA+AGG | 0.153897 | tig0021157:-9006 | Msa1388650:CDS |
| CCACTGGAAATGACAGATTT+TGG | 0.182916 | tig0021157:+6433 | None:intergenic |
| ACGAGATAAATTGGCTTCTT+TGG | 0.195096 | tig0021157:+10210 | None:intergenic |
| TGATCTGTTTACAGGAAAAT+TGG | 0.200570 | tig0021157:-7531 | Msa1388650:CDS |
| ATTTCTTCTTAGTTTCATTA+TGG | 0.233368 | tig0021157:-9907 | Msa1388650:CDS |
| TTTATGTAATCATAATTATT+TGG | 0.242013 | tig0021157:-6121 | Msa1388650:three_prime_UTR |
| CTATCAATTAAATTCCTATA+AGG | 0.256262 | tig0021157:+6240 | None:intergenic |
| ATCAAACTTGCAAATATCTT+TGG | 0.258010 | tig0021157:+11624 | None:intergenic |
| CGAGATAAATTGGCTTCTTT+GGG | 0.258614 | tig0021157:+10211 | None:intergenic |
| TTTCACTTGCCGTTCATTCA+TGG | 0.261252 | tig0021157:-11929 | Msa1388650:exon |
| AAAGATGATGCACCTTAAAA+TGG | 0.279230 | tig0021157:+7369 | None:intergenic |
| ATTCATGGCTTCAGCAATAA+TGG | 0.279843 | tig0021157:-11914 | Msa1388650:exon |
| GCTGCCATTCTCACAAATTC+TGG | 0.282965 | tig0021157:+7007 | None:intergenic |
| TCCATGCCTTTCATTCTTAT+AGG | 0.291334 | tig0021157:+6366 | None:intergenic |
| GTGAAGAATACAAATTGTTT+TGG | 0.302991 | tig0021157:-7039 | Msa1388650:CDS |
| CTTATAGGAATTTAATTGAT+AGG | 0.310563 | tig0021157:-6239 | Msa1388650:CDS |
| GCAACCATTGTTACCTATCT+TGG | 0.312735 | tig0021157:-9964 | Msa1388650:CDS |
| GCCCATCCTGATCTGTTTAC+AGG | 0.312976 | tig0021157:-7539 | Msa1388650:CDS |
| CAATGGGCACACCCTTCTTT+TGG | 0.314196 | tig0021157:-8982 | Msa1388650:intron |
| TTTCTTCTTAGTTTCATTAT+GGG | 0.316075 | tig0021157:-9906 | Msa1388650:intron |
| TTATCATGTATGAATGTATA+TGG | 0.317283 | tig0021157:+12021 | None:intergenic |
| TACCAAAGGACACTCTTCTT+TGG | 0.317894 | tig0021157:-9317 | Msa1388650:CDS |
| GAATCGCCGACGAGATAAAT+TGG | 0.330647 | tig0021157:+10201 | None:intergenic |
| ATTGATTGGGTGAAGGTATT+CGG | 0.331739 | tig0021157:-7482 | Msa1388650:CDS |
| AATTGATAGGAAAATGTATC+AGG | 0.341683 | tig0021157:-6226 | Msa1388650:CDS |
| AGATTATTTCGTTCTGTTAC+CGG | 0.342350 | tig0021157:-7731 | Msa1388650:CDS |
| GGGATGGATGGCACTGGATC+GGG | 0.349194 | tig0021157:-10924 | Msa1388650:CDS |
| GAGGATGGAAAGATAGTAAA+AGG | 0.351214 | tig0021157:-7686 | Msa1388650:CDS |
| AAAAGATTGCTTGCTGAAAC+AGG | 0.353843 | tig0021157:+7452 | None:intergenic |
| CATTAGTCAATATCGAAAAT+AGG | 0.354831 | tig0021157:-9685 | Msa1388650:CDS |
| GCTTCAGCAATAATGGGTTT+TGG | 0.356044 | tig0021157:-11907 | Msa1388650:CDS |
| ACAGTTACATGTAGTTCTTC+AGG | 0.357831 | tig0021157:+9933 | None:intergenic |
| AAAGATATTTGCAAGTTTGA+TGG | 0.365945 | tig0021157:-11622 | Msa1388650:CDS |
| ATATCTGAATTCTGTCATAC+TGG | 0.375380 | tig0021157:+8445 | None:intergenic |
| GGTGCCACGATTGTGCCATT+TGG | 0.379938 | tig0021157:-6977 | Msa1388650:CDS |
| AGTTGTTCAATTATCTTTGT+AGG | 0.381783 | tig0021157:+9656 | None:intergenic |
| TATCTCGTCGGCGATTCCTT+AGG | 0.386203 | tig0021157:-10195 | Msa1388650:CDS |
| TTCATGGCTTCAGCAATAAT+GGG | 0.387693 | tig0021157:-11913 | Msa1388650:CDS |
| AAAGGAGAAGCACATTCAAT+TGG | 0.389488 | tig0021157:+11577 | None:intergenic |
| AGAGGGAGGAGGATCCTTAT+AGG | 0.391376 | tig0021157:-6254 | Msa1388650:CDS |
| ACTTAATCTGCAGGTACAAT+TGG | 0.394476 | tig0021157:+6313 | None:intergenic |
| TTGACACCACTTTGGGATGA+TGG | 0.400001 | tig0021157:-11685 | Msa1388650:CDS |
| AATGAAGCTCAAAGACTTGC+GGG | 0.401301 | tig0021157:-9041 | Msa1388650:CDS |
| CTGAGGTAATCGCTGACAAC+TGG | 0.411724 | tig0021157:+6597 | None:intergenic |
| AGTTGGGTTGACACCACTTT+GGG | 0.412258 | tig0021157:-11692 | Msa1388650:CDS |
| ATAATGAAACTAAGAAGAAA+TGG | 0.413027 | tig0021157:+9909 | None:intergenic |
| ATCGAGACTCGGTTAAGATT+AGG | 0.419884 | tig0021157:-6566 | Msa1388650:intron |
| AGTAAGAATGAAGAACAAGT+TGG | 0.420093 | tig0021157:-11709 | Msa1388650:CDS |
| CTCACAAATTCTGGATGATC+AGG | 0.424559 | tig0021157:+7016 | None:intergenic |
| TCAGGCAAAGCCTCCAAGAT+AGG | 0.439168 | tig0021157:+9951 | None:intergenic |
| AGGGATGGATGGCACTGGAT+CGG | 0.439257 | tig0021157:-10925 | Msa1388650:CDS |
| ACATAAGGGTGGGAGAATCT+TGG | 0.440128 | tig0021157:+11554 | None:intergenic |
| CTGAAGTACTTGTGCTTGCT+AGG | 0.441839 | tig0021157:-9233 | Msa1388650:intron |
| CATACTTGGCAAGAGCTTGA+TGG | 0.448253 | tig0021157:+10889 | None:intergenic |
| GAGAGCCTCACGTGCACCAC+CGG | 0.449620 | tig0021157:+7391 | None:intergenic |
| TTCCAAAGAAGAGTGTCCTT+TGG | 0.451205 | tig0021157:+9315 | None:intergenic |
| TTGACTAATGCCATCTTCAA+TGG | 0.453847 | tig0021157:+9698 | None:intergenic |
| TCCGTATCTTTAAGGACAAT+GGG | 0.454445 | tig0021157:-8998 | Msa1388650:CDS |
| AATGGTGTTCGATCATGAAC+AGG | 0.454903 | tig0021157:+10679 | None:intergenic |
| CCCACCCTTATGTTTCTACC+TGG | 0.455529 | tig0021157:-11544 | Msa1388650:intron |
| CGTCGGTTATCACATGTTGA+TGG | 0.455926 | tig0021157:-7627 | Msa1388650:CDS |
| CCACTTTGGGATGATGGGTA+TGG | 0.460295 | tig0021157:-11679 | Msa1388650:CDS |
| GAAGGAACCTTACCGTTCAA+TGG | 0.464192 | tig0021157:+11775 | None:intergenic |
| CATGATCGAACACCATTTGA+AGG | 0.467533 | tig0021157:-10673 | Msa1388650:intron |
| GTGAGAATGGCAGCACGATT+CGG | 0.472364 | tig0021157:-6998 | Msa1388650:CDS |
| ACTTACCAGGTAGAAACATA+AGG | 0.474260 | tig0021157:+11539 | None:intergenic |
| GTAAGAATGAAGAACAAGTT+GGG | 0.477693 | tig0021157:-11708 | Msa1388650:CDS |
| AAGATAGTAAAAGGTCTGTC+TGG | 0.479324 | tig0021157:-7677 | Msa1388650:CDS |
| ATCCGTATCTTTAAGGACAA+TGG | 0.480139 | tig0021157:-8999 | Msa1388650:CDS |
| GAGCGGCAACGGCGAGTGCA+AGG | 0.490514 | tig0021157:+10166 | None:intergenic |
| CTGTCTGGTGTTCCAGATGA+AGG | 0.491069 | tig0021157:-7662 | Msa1388650:CDS |
| AATAAGACAGGACCTTCATC+TGG | 0.491280 | tig0021157:+7650 | None:intergenic |
| ACCATTGTTACCTATCTTGG+AGG | 0.492576 | tig0021157:-9961 | Msa1388650:CDS |
| GACATGGCAGCAATGAAGTA+AGG | 0.493972 | tig0021157:+9624 | None:intergenic |
| GCCCATTGTCCTTAAAGATA+CGG | 0.494183 | tig0021157:+8997 | None:intergenic |
| ATGAAGGCAACAAATAGAAA+AGG | 0.494795 | tig0021157:+12118 | None:intergenic |
| TCAACCACAGCTACATCCTT+CGG | 0.496112 | tig0021157:-9999 | Msa1388650:intron |
| CACGTGCACCACCGGGATAT+AGG | 0.496494 | tig0021157:+7399 | None:intergenic |
| TCATCCAGAATTTGTGAGAA+TGG | 0.497949 | tig0021157:-7011 | Msa1388650:CDS |
| ATCTGTGATGTTCTCTACAT+TGG | 0.498726 | tig0021157:-7708 | Msa1388650:CDS |
| AAGGAGAAGCACATTCAATT+GGG | 0.499725 | tig0021157:+11578 | None:intergenic |
| TATGCAATGGATCGACTAGT+TGG | 0.500299 | tig0021157:-8425 | Msa1388650:CDS |
| TCCATTGTATATATAAATGA+AGG | 0.500794 | tig0021157:+6039 | None:intergenic |
| GTCGGTTATCACATGTTGAT+GGG | 0.500850 | tig0021157:-7626 | Msa1388650:CDS |
| ATTGGGTGAAGGTATTCGGC+GGG | 0.507706 | tig0021157:-7478 | Msa1388650:CDS |
| TGACACCACTTTGGGATGAT+GGG | 0.508012 | tig0021157:-11684 | Msa1388650:CDS |
| TCTTTGAGCTTCATTTACAC+TGG | 0.509924 | tig0021157:+9049 | None:intergenic |
| TTAATTATTGCAGGGATGGA+TGG | 0.511467 | tig0021157:-10936 | Msa1388650:intron |
| TTCTATGATTGATTGGGTGA+AGG | 0.512581 | tig0021157:-7489 | Msa1388650:CDS |
| TGGAAGCTGATTAATATATG+TGG | 0.514540 | tig0021157:-6101 | Msa1388650:three_prime_UTR |
| CTCGTCGGCGATTCCTTAGG+TGG | 0.519484 | tig0021157:-10192 | Msa1388650:CDS |
| CAGAAGGGTATTGCTCTTCG+TGG | 0.519495 | tig0021157:-7566 | Msa1388650:CDS |
| TCCTGTAAACAGATCAGGAT+GGG | 0.520965 | tig0021157:+7538 | None:intergenic |
| ATGCAATGGATCGACTAGTT+GGG | 0.523954 | tig0021157:-8424 | Msa1388650:intron |
| CGTTGGATTACGAGCGGCAA+CGG | 0.525743 | tig0021157:+10155 | None:intergenic |
| CTTTGAGCTTCATTTACACT+GGG | 0.527339 | tig0021157:+9050 | None:intergenic |
| CCGTTGCACATACCAAAAGA+AGG | 0.527342 | tig0021157:+8970 | None:intergenic |
| ATCAGGTGATCCATTGAAGA+TGG | 0.530726 | tig0021157:-9708 | Msa1388650:intron |
| TGGTCTTCTAACAATCATCA+AGG | 0.531724 | tig0021157:-8525 | Msa1388650:CDS |
| TATCTGAATTCTGTCATACT+GGG | 0.531731 | tig0021157:+8446 | None:intergenic |
| TCCTTCATTTATATATACAA+TGG | 0.531906 | tig0021157:-6040 | Msa1388650:three_prime_UTR |
| TGTTCAATTATCTTTGTAGG+AGG | 0.532418 | tig0021157:+9659 | None:intergenic |
| ATCTGATCCATTGAACGGTA+AGG | 0.532947 | tig0021157:-11782 | Msa1388650:CDS |
| AAGTTGGGTTGACACCACTT+TGG | 0.533670 | tig0021157:-11693 | Msa1388650:CDS |
| CTTGCATGTACCGTCGTACA+AGG | 0.535922 | tig0021157:-8499 | Msa1388650:CDS |
| AGATGAATTTCTAAGTCAGA+AGG | 0.538688 | tig0021157:-7582 | Msa1388650:CDS |
| CACTTTGGGATGATGGGTAT+GGG | 0.540619 | tig0021157:-11678 | Msa1388650:CDS |
| TGTAGAGAACATCACAGATC+CGG | 0.544185 | tig0021157:+7712 | None:intergenic |
| GTTCAATTATCTTTGTAGGA+GGG | 0.544418 | tig0021157:+9660 | None:intergenic |
| GACAGAATTCAGATATGCAA+TGG | 0.548861 | tig0021157:-8438 | Msa1388650:CDS |
| GAGTGCAAGGCATCCACCTA+AGG | 0.552903 | tig0021157:+10179 | None:intergenic |
| AGATGAGAACAGTGGAGAGG+TGG | 0.553794 | tig0021157:-6460 | Msa1388650:CDS |
| GGGAAGCCTATAAGAATGAA+AGG | 0.554340 | tig0021157:-6372 | Msa1388650:CDS |
| TTAGTAGAAAGCAATAAAGA+AGG | 0.556541 | tig0021157:+11757 | None:intergenic |
| CAACTTCAGACTTAATCTGC+AGG | 0.561313 | tig0021157:+6304 | None:intergenic |
| GAAACTATGTACTAAAACAT+GGG | 0.564538 | tig0021157:+12080 | None:intergenic |
| GCCTATAAGAATGAAAGGCA+TGG | 0.566613 | tig0021157:-6367 | Msa1388650:CDS |
| TGTGATGTTCTCTACATTGG+AGG | 0.567193 | tig0021157:-7705 | Msa1388650:CDS |
| AATCATGCCTCCTTGTACGA+CGG | 0.569230 | tig0021157:+8489 | None:intergenic |
| ATTGTGCCATTTGGAGCTGT+AGG | 0.569928 | tig0021157:-6968 | Msa1388650:CDS |
| GAAGGTCCTGTCTTATTCGT+CGG | 0.569980 | tig0021157:-7644 | Msa1388650:CDS |
| TCTTCGCCTACAGCTCCAAA+TGG | 0.571096 | tig0021157:+6962 | None:intergenic |
| ATTGCAGGGATGGATGGCAC+TGG | 0.577418 | tig0021157:-10930 | Msa1388650:intron |
| TATCATGTATGAATGTATAT+GGG | 0.582186 | tig0021157:+12022 | None:intergenic |
| GATATTTGCAAGTTTGATGG+TGG | 0.583362 | tig0021157:-11619 | Msa1388650:CDS |
| ATGTACTAAAACATGGGATG+AGG | 0.583820 | tig0021157:+12086 | None:intergenic |
| ATATCCCGGTGGTGCACGTG+AGG | 0.584040 | tig0021157:-7396 | Msa1388650:CDS |
| AGAGCCTCACGTGCACCACC+GGG | 0.584102 | tig0021157:+7392 | None:intergenic |
| GATGAATTTCTAAGTCAGAA+GGG | 0.585083 | tig0021157:-7581 | Msa1388650:CDS |
| CCAAAATCTGTCATTTCCAG+TGG | 0.585774 | tig0021157:-6433 | Msa1388650:CDS |
| GATGAGGAGAGCGAAAATGA+AGG | 0.589228 | tig0021157:+12102 | None:intergenic |
| TGAAACTATGTACTAAAACA+TGG | 0.592714 | tig0021157:+12079 | None:intergenic |
| CTTGATCAAGAAGAGGGAGG+AGG | 0.593122 | tig0021157:-6265 | Msa1388650:CDS |
| GAGATAAATTGGCTTCTTTG+GGG | 0.596702 | tig0021157:+10212 | None:intergenic |
| CAGAGATGTTAATCGAGACT+CGG | 0.599945 | tig0021157:-6577 | Msa1388650:CDS |
| TTGCTGAAGCCATGAATGAA+CGG | 0.600837 | tig0021157:+11920 | None:intergenic |
| TCTCACGTTCTCCTATATCC+CGG | 0.601456 | tig0021157:-7410 | Msa1388650:CDS |
| AGAAGGGTATTGCTCTTCGT+GGG | 0.601779 | tig0021157:-7565 | Msa1388650:CDS |
| GGAAGCTGATTAATATATGT+GGG | 0.602768 | tig0021157:-6100 | Msa1388650:three_prime_UTR |
| GCCTCCAAGATAGGTAACAA+TGG | 0.604258 | tig0021157:+9960 | None:intergenic |
| CTTACCAGGTAGAAACATAA+GGG | 0.606155 | tig0021157:+11540 | None:intergenic |
| CGTTGCCGCTCGTAATCCAA+CGG | 0.606482 | tig0021157:-10154 | Msa1388650:CDS |
| TAGATTACTTGATCAAGAAG+AGG | 0.608659 | tig0021157:-6272 | Msa1388650:CDS |
| AAATGAAGCTCAAAGACTTG+CGG | 0.609451 | tig0021157:-9042 | Msa1388650:CDS |
| TGATAACCGACGAATAAGAC+AGG | 0.610814 | tig0021157:+7638 | None:intergenic |
| GATTGGGTGAAGGTATTCGG+CGG | 0.612723 | tig0021157:-7479 | Msa1388650:CDS |
| TTGGGCAAAACCAACGTGGT+GGG | 0.613322 | tig0021157:+11596 | None:intergenic |
| GAGCTTGATGGTGCAAAGAG+AGG | 0.616096 | tig0021157:+10901 | None:intergenic |
| AAGGAGGCATGATTTAGTCA+TGG | 0.617280 | tig0021157:-8480 | Msa1388650:CDS |
| TCTGAATCTGATCCATTGAA+CGG | 0.618967 | tig0021157:-11787 | Msa1388650:CDS |
| AGATTACTTGATCAAGAAGA+GGG | 0.618969 | tig0021157:-6271 | Msa1388650:CDS |
| CGTTGCACATACCAAAAGAA+GGG | 0.620448 | tig0021157:+8971 | None:intergenic |
| TCTGAATTCTGTCATACTGG+GGG | 0.623747 | tig0021157:+8448 | None:intergenic |
| ACTGGTGAAACTTGTTGAAG+AGG | 0.624233 | tig0021157:-10259 | Msa1388650:CDS |
| AAGAAGCCAATTTATCTCGT+CGG | 0.625584 | tig0021157:-10207 | Msa1388650:CDS |
| ATGTTCTCTACATTGGAGGA+TGG | 0.631466 | tig0021157:-7701 | Msa1388650:CDS |
| CCAGGTAGAAACATAAGGGT+GGG | 0.632821 | tig0021157:+11544 | None:intergenic |
| ATAAGTACTAGATCAACCGT+TGG | 0.633799 | tig0021157:+10138 | None:intergenic |
| ATCTGAATTCTGTCATACTG+GGG | 0.633994 | tig0021157:+8447 | None:intergenic |
| AAGCTTCTTACTGGAAGACA+TGG | 0.639687 | tig0021157:+9608 | None:intergenic |
| AGCTCCAAATGGCACAATCG+TGG | 0.641288 | tig0021157:+6973 | None:intergenic |
| ACCAGGTAGAAACATAAGGG+TGG | 0.642032 | tig0021157:+11543 | None:intergenic |
| ATTGGGCAAAACCAACGTGG+TGG | 0.642947 | tig0021157:+11595 | None:intergenic |
| CCATACCCATCATCCCAAAG+TGG | 0.645222 | tig0021157:+11679 | None:intergenic |
| TTGATGGTGGCCCACCACGT+TGG | 0.645750 | tig0021157:-11606 | Msa1388650:CDS |
| GCTGGCTAATATCATACCAA+AGG | 0.651536 | tig0021157:-9331 | Msa1388650:CDS |
| GGTCTTCTAACAATCATCAA+GGG | 0.655238 | tig0021157:-8524 | Msa1388650:CDS |
| TTCCTGTAAACAGATCAGGA+TGG | 0.656474 | tig0021157:+7537 | None:intergenic |
| CAGAGATGAGAACAGTGGAG+AGG | 0.661717 | tig0021157:-6463 | Msa1388650:CDS |
| CACGTTCTCCTATATCCCGG+TGG | 0.663360 | tig0021157:-7407 | Msa1388650:CDS |
| AGGGTGGGAGAATCTTGGAA+AGG | 0.665715 | tig0021157:+11559 | None:intergenic |
| CAAATAGAAAAGGAAAAGCG+TGG | 0.669973 | tig0021157:+12128 | None:intergenic |
| GTAGTGCAGGAAGATTGCAT+TGG | 0.671325 | tig0021157:-8545 | Msa1388650:intron |
| ATCAACCGTTGGATTACGAG+CGG | 0.673740 | tig0021157:+10149 | None:intergenic |
| CTGAATTCTGTCATACTGGG+GGG | 0.675485 | tig0021157:+8449 | None:intergenic |
| AATAGATAGTAAAATCGACC+CGG | 0.684620 | tig0021157:+6396 | None:intergenic |
| TTACTTGATCAAGAAGAGGG+AGG | 0.689781 | tig0021157:-6268 | Msa1388650:CDS |
| ACCTTCAGAGATGAGAACAG+TGG | 0.690993 | tig0021157:-6468 | Msa1388650:intron |
| GAGTGATAAAGAAAATTACA+CGG | 0.706796 | tig0021157:-12257 | None:intergenic |
| AGCTGATTAATATATGTGGG+TGG | 0.722184 | tig0021157:-6097 | Msa1388650:three_prime_UTR |
| TTGGGTGAAGGTATTCGGCG+GGG | 0.728287 | tig0021157:-7477 | Msa1388650:CDS |
| TCAATTGGGCAAAACCAACG+TGG | 0.730520 | tig0021157:+11592 | None:intergenic |
| AGTCTCGATTAACATCTCTG+AGG | 0.732349 | tig0021157:+6580 | None:intergenic |
| GCATGTACCGTCGTACAAGG+AGG | 0.733690 | tig0021157:-8496 | Msa1388650:CDS |
| TTGCAACTGAGATCTACCGA+AGG | 0.733953 | tig0021157:+9983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACTTTTTTTTTTTTTGA+AGG | + | tig0021157:7470-7489 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTAACTCAAAAT+AGG | + | tig0021157:10207-10226 | None:intergenic | 10.0% |
| !! | TTTATGTAATCATAATTATT+TGG | - | tig0021157:12157-12176 | Msa1388650:five_prime_UTR | 10.0% |
| !! | ATTAAAAAGTTATAGAATTG+AGG | + | tig0021157:6858-6877 | None:intergenic | 15.0% |
| !! | CATAAAATCAAAAAACAAAA+AGG | + | tig0021157:7995-8014 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTGATTTTATGT+AGG | - | tig0021157:7996-8015 | Msa1388650:intron | 15.0% |
| !! | TAAAAACTACTACAAAATAA+GGG | + | tig0021157:8800-8819 | None:intergenic | 15.0% |
| !!! | ATACTAATATTGTGTATTTT+TGG | - | tig0021157:9095-9114 | Msa1388650:intron | 15.0% |
| !!! | TACTAATATTGTGTATTTTT+GGG | - | tig0021157:9096-9115 | Msa1388650:intron | 15.0% |
| !! | TTCCTTAATTAATTAAAGAT+TGG | - | tig0021157:10079-10098 | Msa1388650:intron | 15.0% |
| !! | TCTAACTATATAAAATCAAA+TGG | - | tig0021157:10475-10494 | Msa1388650:intron | 15.0% |
| !! | AATATTACAAAGAAAATGTA+AGG | + | tig0021157:10975-10994 | None:intergenic | 15.0% |
| !! | TGATTGTACTAAATAAAAAA+TGG | - | tig0021157:12210-12229 | Msa1388650:intron | 15.0% |
| !!! | AAAGTGTTAGTAATAATGAA+TGG | - | tig0021157:6044-6063 | Msa1388650:three_prime_UTR | 20.0% |
| !! | AAGTGTTAGTAATAATGAAT+GGG | - | tig0021157:6045-6064 | Msa1388650:three_prime_UTR | 20.0% |
| !! | TATCATGTATGAATGTATAT+GGG | + | tig0021157:6259-6278 | None:intergenic | 20.0% |
| !! | TTATCATGTATGAATGTATA+TGG | + | tig0021157:6260-6279 | None:intergenic | 20.0% |
| !! | AAAATTAAGAAAGTTTGTAG+TGG | - | tig0021157:7017-7036 | Msa1388650:CDS | 20.0% |
| !! | AAATAATGTAGTTGAAGATT+GGG | - | tig0021157:7233-7252 | Msa1388650:intron | 20.0% |
| !! | AAAAAAAAAGTTTATTGTGC+TGG | - | tig0021157:7476-7495 | Msa1388650:CDS | 20.0% |
| !! | AACGTAAATATGATAATTAG+AGG | + | tig0021157:7540-7559 | None:intergenic | 20.0% |
| !!! | TGATGATGCATTTAATTATT+AGG | - | tig0021157:7687-7706 | Msa1388650:CDS | 20.0% |
| !! | CATTTAATTATTAGGACATT+TGG | - | tig0021157:7695-7714 | Msa1388650:CDS | 20.0% |
| !! | GAATATGCAAGTTTATTTAT+CGG | - | tig0021157:7824-7843 | Msa1388650:intron | 20.0% |
| !!! | TTCAAATTTGCTTAAGTTTT+GGG | + | tig0021157:7865-7884 | None:intergenic | 20.0% |
| !! | AAAGAATTATTATCATGCTA+CGG | + | tig0021157:8251-8270 | None:intergenic | 20.0% |
| !! | ATAATGAAACTAAGAAGAAA+TGG | + | tig0021157:8372-8391 | None:intergenic | 20.0% |
| !! | ATTTCTTCTTAGTTTCATTA+TGG | - | tig0021157:8371-8390 | Msa1388650:intron | 20.0% |
| !! | TTTCTTCTTAGTTTCATTAT+GGG | - | tig0021157:8372-8391 | Msa1388650:intron | 20.0% |
| !!! | CTTTTCCATTTACATTTTTA+TGG | - | tig0021157:8424-8443 | Msa1388650:intron | 20.0% |
| !! | TATCACCATAAAAATGTAAA+TGG | + | tig0021157:8432-8451 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCATTATGAG+TGG | - | tig0021157:8517-8536 | Msa1388650:CDS | 20.0% |
| !! | TTATACAATTTCATATCATC+AGG | - | tig0021157:8553-8572 | Msa1388650:intron | 20.0% |
| !! | ACACACTTACAAAATTATAA+AGG | - | tig0021157:8737-8756 | Msa1388650:intron | 20.0% |
| !!! | AAATTATAAAGGTACTTTGT+TGG | - | tig0021157:8748-8767 | Msa1388650:intron | 20.0% |
| !! | ATACTTAAAAACAGTTAAGA+GGG | + | tig0021157:8777-8796 | None:intergenic | 20.0% |
| !! | CTAAAAACTACTACAAAATA+AGG | + | tig0021157:8801-8820 | None:intergenic | 20.0% |
| !! | AAAATGATAGATGAAAAAGA+AGG | + | tig0021157:8830-8849 | None:intergenic | 20.0% |
| !! | TTTAAATAAATGTCGATGAT+AGG | + | tig0021157:9349-9368 | None:intergenic | 20.0% |
| !! | ATATTTAGCAAGCATAATAT+TGG | + | tig0021157:9892-9911 | None:intergenic | 20.0% |
| !! | CACCAATCTTTAATTAATTA+AGG | + | tig0021157:10084-10103 | None:intergenic | 20.0% |
| !! | TCCTATAAATTATAATGTCA+GGG | - | tig0021157:11217-11236 | Msa1388650:intron | 20.0% |
| !! | CTATCAATTAAATTCCTATA+AGG | + | tig0021157:12041-12060 | None:intergenic | 20.0% |
| !! | CTTATAGGAATTTAATTGAT+AGG | - | tig0021157:12039-12058 | Msa1388650:five_prime_UTR | 20.0% |
| !!! | TTTCTATCAACAAATTTTCA+GGG | + | tig0021157:12119-12138 | None:intergenic | 20.0% |
| !!! | ATTTCTATCAACAAATTTTC+AGG | + | tig0021157:12120-12139 | None:intergenic | 20.0% |
| !! | TCCTTCATTTATATATACAA+TGG | - | tig0021157:12238-12257 | Msa1388650:intron | 20.0% |
| !! | TCCATTGTATATATAAATGA+AGG | + | tig0021157:12242-12261 | None:intergenic | 20.0% |
| ! | GAAACTATGTACTAAAACAT+GGG | + | tig0021157:6201-6220 | None:intergenic | 25.0% |
| ! | TGAAACTATGTACTAAAACA+TGG | + | tig0021157:6202-6221 | None:intergenic | 25.0% |
| !!! | TCTTCTTTGAGAATGTTTTA+TGG | + | tig0021157:6414-6433 | None:intergenic | 25.0% |
| ! | TTAGTAGAAAGCAATAAAGA+AGG | + | tig0021157:6524-6543 | None:intergenic | 25.0% |
| ! | ATCAAACTTGCAAATATCTT+TGG | + | tig0021157:6657-6676 | None:intergenic | 25.0% |
| ! | AAAGATATTTGCAAGTTTGA+TGG | - | tig0021157:6656-6675 | Msa1388650:intron | 25.0% |
| ! | GAAATAATGTAGTTGAAGAT+TGG | - | tig0021157:7232-7251 | Msa1388650:intron | 25.0% |
| !!! | TCAAATTTGCTTAAGTTTTG+GGG | + | tig0021157:7864-7883 | None:intergenic | 25.0% |
| !!! | GTTCAAATTTGCTTAAGTTT+TGG | + | tig0021157:7866-7885 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTATGTAGGAC+TGG | - | tig0021157:8001-8020 | Msa1388650:intron | 25.0% |
| !!! | CAAATTTGTTCGCATTTTAT+CGG | - | tig0021157:8208-8227 | Msa1388650:intron | 25.0% |
| !!! | AAATTTGTTCGCATTTTATC+GGG | - | tig0021157:8209-8228 | Msa1388650:intron | 25.0% |
| ! | TAATTCTCTTGCAATTGTTA+TGG | - | tig0021157:8452-8471 | Msa1388650:CDS | 25.0% |
| ! | CATTAGTCAATATCGAAAAT+AGG | - | tig0021157:8593-8612 | Msa1388650:intron | 25.0% |
| ! | AGTTGTTCAATTATCTTTGT+AGG | + | tig0021157:8625-8644 | None:intergenic | 25.0% |
| ! | TAATATCAAAAGCTTCTTAC+TGG | + | tig0021157:8682-8701 | None:intergenic | 25.0% |
| ! | TTAATTTACCTCCTAAACTT+TGG | - | tig0021157:8710-8729 | Msa1388650:intron | 25.0% |
| ! | GATACTTAAAAACAGTTAAG+AGG | + | tig0021157:8778-8797 | None:intergenic | 25.0% |
| !! | TTTCATCTATCATTTTCCTT+TGG | - | tig0021157:8834-8853 | Msa1388650:intron | 25.0% |
| !!! | TTGAGACATTACTTTTAAGT+TGG | - | tig0021157:9142-9161 | Msa1388650:intron | 25.0% |
| !!! | TTAAGTTGGTTTTCTCAAAT+TGG | - | tig0021157:9156-9175 | Msa1388650:intron | 25.0% |
| !!! | TAAGTTGGTTTTCTCAAATT+GGG | - | tig0021157:9157-9176 | Msa1388650:intron | 25.0% |
| ! | TCGAAATCACAAATGATATT+AGG | + | tig0021157:9383-9402 | None:intergenic | 25.0% |
| !! | ACAATCTTTTCAATTTCTGT+TGG | - | tig0021157:9463-9482 | Msa1388650:intron | 25.0% |
| ! | TAAAACCGTGTAATAAGAAA+AGG | + | tig0021157:9631-9650 | None:intergenic | 25.0% |
| ! | CAAGAAAAATCAATGTTAAC+TGG | + | tig0021157:9985-10004 | None:intergenic | 25.0% |
| ! | AAGGTTCAATGATACAAAAT+CGG | + | tig0021157:10120-10139 | None:intergenic | 25.0% |
| ! | TCTGAAGAACTATATATAGA+AGG | + | tig0021157:10139-10158 | None:intergenic | 25.0% |
| !! | TGAGTTTTCTATGATTGATT+GGG | - | tig0021157:10783-10802 | Msa1388650:intron | 25.0% |
| !!! | GTAATCGTATTTTTTATCCA+CGG | - | tig0021157:10938-10957 | Msa1388650:intron | 25.0% |
| ! | CAAAAAATAGTACATAGAGA+AGG | + | tig0021157:11120-11139 | None:intergenic | 25.0% |
| ! | CTCCTATAAATTATAATGTC+AGG | - | tig0021157:11216-11235 | Msa1388650:intron | 25.0% |
| ! | ACCCTGACATTATAATTTAT+AGG | + | tig0021157:11221-11240 | None:intergenic | 25.0% |
| !! | GTGAAGAATACAAATTGTTT+TGG | - | tig0021157:11239-11258 | Msa1388650:intron | 25.0% |
| ! | GAACATTTGGTATATCTAAT+TGG | - | tig0021157:11602-11621 | Msa1388650:CDS | 25.0% |
| !!! | GTCGATTTTACTATCTATTT+GGG | - | tig0021157:11886-11905 | Msa1388650:CDS | 25.0% |
| ! | AATTGATAGGAAAATGTATC+AGG | - | tig0021157:12052-12071 | Msa1388650:five_prime_UTR | 25.0% |
| !! | ATCATTTTCAGAAGGATATA+AGG | + | tig0021157:12078-12097 | None:intergenic | 25.0% |
| !!! | ATTTTCAGGGTTTAAATGTT+GGG | + | tig0021157:12106-12125 | None:intergenic | 25.0% |
| !!! | AATTTTCAGGGTTTAAATGT+TGG | + | tig0021157:12107-12126 | None:intergenic | 25.0% |
| !! | TAATGAATGGGTTGATATGA+AGG | - | tig0021157:6057-6076 | Msa1388650:three_prime_UTR | 30.0% |
| ATGAAGGCAACAAATAGAAA+AGG | + | tig0021157:6163-6182 | None:intergenic | 30.0% | |
| !! | AGAATGTTTTATGGTGGAAA+TGG | + | tig0021157:6405-6424 | None:intergenic | 30.0% |
| !! | TCTTTGAGAATGTTTTATGG+TGG | + | tig0021157:6411-6430 | None:intergenic | 30.0% |
| AGTAAGAATGAAGAACAAGT+TGG | - | tig0021157:6569-6588 | Msa1388650:CDS | 30.0% | |
| GTAAGAATGAAGAACAAGTT+GGG | - | tig0021157:6570-6589 | Msa1388650:CDS | 30.0% | |
| TGTTTGCGTTTAATTATTGC+AGG | - | tig0021157:7333-7352 | Msa1388650:intron | 30.0% | |
| GTTTGCGTTTAATTATTGCA+GGG | - | tig0021157:7334-7353 | Msa1388650:intron | 30.0% | |
| ! | ATATTTACGTTTTGCACAAC+AGG | - | tig0021157:7549-7568 | Msa1388650:CDS | 30.0% |
| AAAAAGCAAAGACCTTCAAA+TGG | + | tig0021157:7620-7639 | None:intergenic | 30.0% | |
| GTTTATATTGTGTCGAAAGT+AGG | - | tig0021157:7792-7811 | Msa1388650:intron | 30.0% | |
| !!! | AAATTTGCTTAAGTTTTGGG+GGG | + | tig0021157:7862-7881 | None:intergenic | 30.0% |
| !! | CAAATTTGCTTAAGTTTTGG+GGG | + | tig0021157:7863-7882 | None:intergenic | 30.0% |
| TTAGTAGCACACAATAATCA+TGG | + | tig0021157:7940-7959 | None:intergenic | 30.0% | |
| !!! | GTACTTATTTTAGTCAATCC+TGG | - | tig0021157:8155-8174 | Msa1388650:intron | 30.0% |
| TAAGCAAGACATGAAATAAG+AGG | + | tig0021157:8485-8504 | None:intergenic | 30.0% | |
| GTTCAATTATCTTTGTAGGA+GGG | + | tig0021157:8621-8640 | None:intergenic | 30.0% | |
| TGTTCAATTATCTTTGTAGG+AGG | + | tig0021157:8622-8641 | None:intergenic | 30.0% | |
| TGAACTTGTAAGAATTTGTC+TGG | + | tig0021157:8868-8887 | None:intergenic | 30.0% | |
| TTGCAAAATCCGTATCTTTA+AGG | - | tig0021157:9272-9291 | Msa1388650:CDS | 30.0% | |
| ! | TTTTCAATTTCTGTTGGAAC+AGG | - | tig0021157:9469-9488 | Msa1388650:intron | 30.0% |
| TTTGAGGAGTAAACACTAAA+GGG | + | tig0021157:9502-9521 | None:intergenic | 30.0% | |
| AGATTACATAGGCTGTAAAT+CGG | + | tig0021157:9667-9686 | None:intergenic | 30.0% | |
| GTTATCACAGAAGATTACAT+AGG | + | tig0021157:9678-9697 | None:intergenic | 30.0% | |
| TATCTGAATTCTGTCATACT+GGG | + | tig0021157:9835-9854 | None:intergenic | 30.0% | |
| ATATCTGAATTCTGTCATAC+TGG | + | tig0021157:9836-9855 | None:intergenic | 30.0% | |
| AAAATCAATGTTAACTGGAG+AGG | + | tig0021157:9980-9999 | None:intergenic | 30.0% | |
| GGAAAAGTAAAACAGAACAA+TGG | + | tig0021157:10063-10082 | None:intergenic | 30.0% | |
| TCAATGATACAAAATCGGAT+AGG | + | tig0021157:10115-10134 | None:intergenic | 30.0% | |
| AGATTATTTCGTTCTGTTAC+CGG | - | tig0021157:10547-10566 | Msa1388650:intron | 30.0% | |
| AGATGAATTTCTAAGTCAGA+AGG | - | tig0021157:10696-10715 | Msa1388650:CDS | 30.0% | |
| GATGAATTTCTAAGTCAGAA+GGG | - | tig0021157:10697-10716 | Msa1388650:CDS | 30.0% | |
| ! | AATTTTCCTGTAAACAGATC+AGG | + | tig0021157:10748-10767 | None:intergenic | 30.0% |
| TGATCTGTTTACAGGAAAAT+TGG | - | tig0021157:10747-10766 | Msa1388650:intron | 30.0% | |
| ! | CTGAGTTTTCTATGATTGAT+TGG | - | tig0021157:10782-10801 | Msa1388650:intron | 30.0% |
| AAAGATGATGCACCTTAAAA+TGG | + | tig0021157:10912-10931 | None:intergenic | 30.0% | |
| GTAAGGATATAAAATAACCG+TGG | + | tig0021157:10958-10977 | None:intergenic | 30.0% | |
| CTCTATACTTTATAGAGTGT+TGG | - | tig0021157:11021-11040 | Msa1388650:intron | 30.0% | |
| ! | CATGAACTGTTATTTGATGA+TGG | - | tig0021157:11180-11199 | Msa1388650:intron | 30.0% |
| TCAACATATGCATCTATGAT+CGG | + | tig0021157:11466-11485 | None:intergenic | 30.0% | |
| ! | GATGCATATGTTGAATGTTT+TGG | - | tig0021157:11472-11491 | Msa1388650:intron | 30.0% |
| !! | AAAATAATCAAGCCTTGTTG+TGG | - | tig0021157:11571-11590 | Msa1388650:CDS | 30.0% |
| AATAGATAGTAAAATCGACC+CGG | + | tig0021157:11885-11904 | None:intergenic | 30.0% | |
| !! | GGTCGATTTTACTATCTATT+TGG | - | tig0021157:11885-11904 | Msa1388650:CDS | 30.0% |
| TAGATTACTTGATCAAGAAG+AGG | - | tig0021157:12006-12025 | Msa1388650:five_prime_UTR | 30.0% | |
| AGATTACTTGATCAAGAAGA+GGG | - | tig0021157:12007-12026 | Msa1388650:five_prime_UTR | 30.0% | |
| !! | TTTTCAGGGTTTAAATGTTG+GGG | + | tig0021157:12105-12124 | None:intergenic | 30.0% |
| TGGAAGCTGATTAATATATG+TGG | - | tig0021157:12177-12196 | Msa1388650:five_prime_UTR | 30.0% | |
| GGAAGCTGATTAATATATGT+GGG | - | tig0021157:12178-12197 | Msa1388650:five_prime_UTR | 30.0% | |
| CAAATAGAAAAGGAAAAGCG+TGG | + | tig0021157:6153-6172 | None:intergenic | 35.0% | |
| ATGTACTAAAACATGGGATG+AGG | + | tig0021157:6195-6214 | None:intergenic | 35.0% | |
| ATTCATGGCTTCAGCAATAA+TGG | - | tig0021157:6364-6383 | Msa1388650:CDS | 35.0% | |
| TTCATGGCTTCAGCAATAAT+GGG | - | tig0021157:6365-6384 | Msa1388650:CDS | 35.0% | |
| TCTGAATCTGATCCATTGAA+CGG | - | tig0021157:6491-6510 | Msa1388650:intron | 35.0% | |
| GATATTTGCAAGTTTGATGG+TGG | - | tig0021157:6659-6678 | Msa1388650:intron | 35.0% | |
| ! | AAGGAGAAGCACATTCAATT+GGG | + | tig0021157:6703-6722 | None:intergenic | 35.0% |
| ! | AAAGGAGAAGCACATTCAAT+TGG | + | tig0021157:6704-6723 | None:intergenic | 35.0% |
| CTTACCAGGTAGAAACATAA+GGG | + | tig0021157:6741-6760 | None:intergenic | 35.0% | |
| ACTTACCAGGTAGAAACATA+AGG | + | tig0021157:6742-6761 | None:intergenic | 35.0% | |
| TCAACAAGCTCTTATATCGA+GGG | + | tig0021157:6987-7006 | None:intergenic | 35.0% | |
| TTAATTATTGCAGGGATGGA+TGG | - | tig0021157:7342-7361 | Msa1388650:intron | 35.0% | |
| ! | GAGATAAATTGGCTTCTTTG+GGG | + | tig0021157:8069-8088 | None:intergenic | 35.0% |
| ! | CGAGATAAATTGGCTTCTTT+GGG | + | tig0021157:8070-8089 | None:intergenic | 35.0% |
| ! | ACGAGATAAATTGGCTTCTT+TGG | + | tig0021157:8071-8090 | None:intergenic | 35.0% |
| AAGAAGCCAATTTATCTCGT+CGG | - | tig0021157:8071-8090 | Msa1388650:intron | 35.0% | |
| ATAAGTACTAGATCAACCGT+TGG | + | tig0021157:8143-8162 | None:intergenic | 35.0% | |
| TGCGAACAAATTTGACAGAA+AGG | + | tig0021157:8202-8221 | None:intergenic | 35.0% | |
| ACAGTTACATGTAGTTCTTC+AGG | + | tig0021157:8348-8367 | None:intergenic | 35.0% | |
| TTGACTAATGCCATCTTCAA+TGG | + | tig0021157:8583-8602 | None:intergenic | 35.0% | |
| AGTGTGTGTTACCAAAGTTT+AGG | + | tig0021157:8724-8743 | None:intergenic | 35.0% | |
| TTGTCTGGAAAATAGACCAA+AGG | + | tig0021157:8853-8872 | None:intergenic | 35.0% | |
| TTACTCTCTGATCTATTGTC+AGG | - | tig0021157:8923-8942 | Msa1388650:intron | 35.0% | |
| TGACAAAGTTTCCTTTCTAG+TGG | - | tig0021157:9189-9208 | Msa1388650:intron | 35.0% | |
| TGTTATCATTGCCACTAGAA+AGG | + | tig0021157:9203-9222 | None:intergenic | 35.0% | |
| CTTTGAGCTTCATTTACACT+GGG | + | tig0021157:9231-9250 | None:intergenic | 35.0% | |
| TCTTTGAGCTTCATTTACAC+TGG | + | tig0021157:9232-9251 | None:intergenic | 35.0% | |
| AAATGAAGCTCAAAGACTTG+CGG | - | tig0021157:9236-9255 | Msa1388650:CDS | 35.0% | |
| ! | ATCCGTATCTTTAAGGACAA+TGG | - | tig0021157:9279-9298 | Msa1388650:CDS | 35.0% |
| ! | TCCGTATCTTTAAGGACAAT+GGG | - | tig0021157:9280-9299 | Msa1388650:CDS | 35.0% |
| CTGATCAATCAAAACACTGT+TGG | + | tig0021157:9425-9444 | None:intergenic | 35.0% | |
| ! | TTGATCAGTCTCCTTTAAAG+TGG | - | tig0021157:9437-9456 | Msa1388650:intron | 35.0% |
| ! | AAGATTGTTCGCCACTTTAA+AGG | + | tig0021157:9451-9470 | None:intergenic | 35.0% |
| TTGAGGAGTAAACACTAAAG+GGG | + | tig0021157:9501-9520 | None:intergenic | 35.0% | |
| GTTTGAGGAGTAAACACTAA+AGG | + | tig0021157:9503-9522 | None:intergenic | 35.0% | |
| TCCTCAAACATGATTGTCTT+CGG | - | tig0021157:9514-9533 | Msa1388650:intron | 35.0% | |
| CACTGTTTAACATTGCAGTA+TGG | - | tig0021157:9591-9610 | Msa1388650:intron | 35.0% | |
| !!! | GCTAGCCTTTTCTTATTACA+CGG | - | tig0021157:9623-9642 | Msa1388650:CDS | 35.0% |
| TTGATTAATTGTGCTCTGCA+TGG | - | tig0021157:9711-9730 | Msa1388650:intron | 35.0% | |
| TGGTCTTCTAACAATCATCA+AGG | - | tig0021157:9753-9772 | Msa1388650:intron | 35.0% | |
| GGTCTTCTAACAATCATCAA+GGG | - | tig0021157:9754-9773 | Msa1388650:intron | 35.0% | |
| ATCTGAATTCTGTCATACTG+GGG | + | tig0021157:9834-9853 | None:intergenic | 35.0% | |
| GACAGAATTCAGATATGCAA+TGG | - | tig0021157:9840-9859 | Msa1388650:intron | 35.0% | |
| !! | TTGCAAACTGCCTTTTGTTT+TGG | - | tig0021157:10228-10247 | Msa1388650:CDS | 35.0% |
| !!! | GCCTTTTGTTTTGGAAAAGA+CGG | - | tig0021157:10237-10256 | Msa1388650:CDS | 35.0% |
| ! | TCCGTCTTTTCCAAAACAAA+AGG | + | tig0021157:10241-10260 | None:intergenic | 35.0% |
| GAACTGATTGAGTGATATAG+AGG | - | tig0021157:10388-10407 | Msa1388650:intron | 35.0% | |
| ! | AGGCTCTAATGATACAAAAC+CGG | - | tig0021157:10408-10427 | Msa1388650:intron | 35.0% |
| TCTAATGATACAAAACCGGA+AGG | - | tig0021157:10412-10431 | Msa1388650:intron | 35.0% | |
| ACTGGTATGTAACTAACGAA+TGG | - | tig0021157:10437-10456 | Msa1388650:intron | 35.0% | |
| GTATGTAACTAACGAATGGA+AGG | - | tig0021157:10441-10460 | Msa1388650:intron | 35.0% | |
| ATCTGTGATGTTCTCTACAT+TGG | - | tig0021157:10570-10589 | Msa1388650:intron | 35.0% | |
| GAGGATGGAAAGATAGTAAA+AGG | - | tig0021157:10592-10611 | Msa1388650:intron | 35.0% | |
| AAGATAGTAAAAGGTCTGTC+TGG | - | tig0021157:10601-10620 | Msa1388650:intron | 35.0% | |
| TTCTATGATTGATTGGGTGA+AGG | - | tig0021157:10789-10808 | Msa1388650:intron | 35.0% | |
| !! | ATTGATTGGGTGAAGGTATT+CGG | - | tig0021157:10796-10815 | Msa1388650:intron | 35.0% |
| ! | AAAAGATTGCTTGCTGAAAC+AGG | + | tig0021157:10829-10848 | None:intergenic | 35.0% |
| !!! | TAGAGTGTTGGTTAGTTTTG+TGG | - | tig0021157:11033-11052 | Msa1388650:intron | 35.0% |
| GATCTCTAAGTTTGACATGT+AGG | + | tig0021157:11158-11177 | None:intergenic | 35.0% | |
| TCATCCAGAATTTGTGAGAA+TGG | - | tig0021157:11267-11286 | Msa1388650:intron | 35.0% | |
| TCCATGCCTTTCATTCTTAT+AGG | + | tig0021157:11915-11934 | None:intergenic | 35.0% | |
| ACTTAATCTGCAGGTACAAT+TGG | + | tig0021157:11968-11987 | None:intergenic | 35.0% | |
| AGCTGATTAATATATGTGGG+TGG | - | tig0021157:12181-12200 | Msa1388650:five_prime_UTR | 35.0% | |
| !! | GAATGGGTTGATATGAAGGA+AGG | - | tig0021157:6061-6080 | Msa1388650:three_prime_UTR | 40.0% |
| TTTCACTTGCCGTTCATTCA+TGG | - | tig0021157:6349-6368 | Msa1388650:CDS | 40.0% | |
| TTGCTGAAGCCATGAATGAA+CGG | + | tig0021157:6361-6380 | None:intergenic | 40.0% | |
| !!! | GCTTCAGCAATAATGGGTTT+TGG | - | tig0021157:6371-6390 | Msa1388650:CDS | 40.0% |
| ATCTGATCCATTGAACGGTA+AGG | - | tig0021157:6496-6515 | Msa1388650:intron | 40.0% | |
| ! | GAGCAAAGTTGTTACTTACC+AGG | + | tig0021157:6755-6774 | None:intergenic | 40.0% |
| TATATCGAGGGACGAAGTAA+CGG | + | tig0021157:6975-6994 | None:intergenic | 40.0% | |
| GTCAACAAGCTCTTATATCG+AGG | + | tig0021157:6988-7007 | None:intergenic | 40.0% | |
| GTTGAAGATTGGGAAGATGT+AGG | - | tig0021157:7243-7262 | Msa1388650:intron | 40.0% | |
| GCGTTTAATTATTGCAGGGA+TGG | - | tig0021157:7338-7357 | Msa1388650:intron | 40.0% | |
| ACAACACAACACAGCATACT+TGG | + | tig0021157:7406-7425 | None:intergenic | 40.0% | |
| AATGGTGTTCGATCATGAAC+AGG | + | tig0021157:7602-7621 | None:intergenic | 40.0% | |
| CATGATCGAACACCATTTGA+AGG | - | tig0021157:7605-7624 | Msa1388650:CDS | 40.0% | |
| !! | ACTGGTGAAACTTGTTGAAG+AGG | - | tig0021157:8019-8038 | Msa1388650:intron | 40.0% |
| GCAACCATTGTTACCTATCT+TGG | - | tig0021157:8314-8333 | Msa1388650:intron | 40.0% | |
| ACCATTGTTACCTATCTTGG+AGG | - | tig0021157:8317-8336 | Msa1388650:intron | 40.0% | |
| ATCAGGTGATCCATTGAAGA+TGG | - | tig0021157:8570-8589 | Msa1388650:intron | 40.0% | |
| AAGCTTCTTACTGGAAGACA+TGG | + | tig0021157:8673-8692 | None:intergenic | 40.0% | |
| GTGTGTTACCAAAGTTTAGG+AGG | + | tig0021157:8721-8740 | None:intergenic | 40.0% | |
| GCTGGCTAATATCATACCAA+AGG | - | tig0021157:8947-8966 | Msa1388650:intron | 40.0% | |
| TACCAAAGGACACTCTTCTT+TGG | - | tig0021157:8961-8980 | Msa1388650:intron | 40.0% | |
| !! | TTCCAAAGAAGAGTGTCCTT+TGG | + | tig0021157:8966-8985 | None:intergenic | 40.0% |
| AATGAAGCTCAAAGACTTGC+GGG | - | tig0021157:9237-9256 | Msa1388650:CDS | 40.0% | |
| GCCCATTGTCCTTAAAGATA+CGG | + | tig0021157:9284-9303 | None:intergenic | 40.0% | |
| CGTTGCACATACCAAAAGAA+GGG | + | tig0021157:9310-9329 | None:intergenic | 40.0% | |
| ! | CCTTCTTTTGGTATGTGCAA+CGG | - | tig0021157:9308-9327 | Msa1388650:CDS | 40.0% |
| ACCGAAGACAATCATGTTTG+AGG | + | tig0021157:9518-9537 | None:intergenic | 40.0% | |
| CAAACATGATTGTCTTCGGT+AGG | - | tig0021157:9518-9537 | Msa1388650:intron | 40.0% | |
| ! | GATTGTCTTCGGTAGGATTT+TGG | - | tig0021157:9525-9544 | Msa1388650:intron | 40.0% |
| CATTGCAGTATGGTATGAAC+TGG | - | tig0021157:9601-9620 | Msa1388650:intron | 40.0% | |
| ! | AAGGAGGCATGATTTAGTCA+TGG | - | tig0021157:9798-9817 | Msa1388650:intron | 40.0% |
| TCTGAATTCTGTCATACTGG+GGG | + | tig0021157:9833-9852 | None:intergenic | 40.0% | |
| TATGCAATGGATCGACTAGT+TGG | - | tig0021157:9853-9872 | Msa1388650:intron | 40.0% | |
| ! | ATGCAATGGATCGACTAGTT+GGG | - | tig0021157:9854-9873 | Msa1388650:intron | 40.0% |
| GATGACCATCGTGATGTATT+CGG | - | tig0021157:10286-10305 | Msa1388650:intron | 40.0% | |
| ATGACCATCGTGATGTATTC+GGG | - | tig0021157:10287-10306 | Msa1388650:intron | 40.0% | |
| GTATTCGGGATCAATGTTGT+CGG | - | tig0021157:10301-10320 | Msa1388650:intron | 40.0% | |
| TATTCGGGATCAATGTTGTC+GGG | - | tig0021157:10302-10321 | Msa1388650:intron | 40.0% | |
| TGTAGAGAACATCACAGATC+CGG | + | tig0021157:10569-10588 | None:intergenic | 40.0% | |
| TGTGATGTTCTCTACATTGG+AGG | - | tig0021157:10573-10592 | Msa1388650:intron | 40.0% | |
| ATGTTCTCTACATTGGAGGA+TGG | - | tig0021157:10577-10596 | Msa1388650:intron | 40.0% | |
| AATAAGACAGGACCTTCATC+TGG | + | tig0021157:10631-10650 | None:intergenic | 40.0% | |
| TGATAACCGACGAATAAGAC+AGG | + | tig0021157:10643-10662 | None:intergenic | 40.0% | |
| GTCGGTTATCACATGTTGAT+GGG | - | tig0021157:10652-10671 | Msa1388650:intron | 40.0% | |
| TCCTGTAAACAGATCAGGAT+GGG | + | tig0021157:10743-10762 | None:intergenic | 40.0% | |
| TTCCTGTAAACAGATCAGGA+TGG | + | tig0021157:10744-10763 | None:intergenic | 40.0% | |
| CTCACAAATTCTGGATGATC+AGG | + | tig0021157:11265-11284 | None:intergenic | 40.0% | |
| TGTGGAGAGGAATGAACATT+TGG | - | tig0021157:11589-11608 | Msa1388650:CDS | 40.0% | |
| AGTCTCGATTAACATCTCTG+AGG | + | tig0021157:11701-11720 | None:intergenic | 40.0% | |
| CAGAGATGTTAATCGAGACT+CGG | - | tig0021157:11701-11720 | Msa1388650:CDS | 40.0% | |
| ! | ATCGAGACTCGGTTAAGATT+AGG | - | tig0021157:11712-11731 | Msa1388650:CDS | 40.0% |
| ! | CCACTGGAAATGACAGATTT+TGG | + | tig0021157:11848-11867 | None:intergenic | 40.0% |
| ! | CCAAAATCTGTCATTTCCAG+TGG | - | tig0021157:11845-11864 | Msa1388650:CDS | 40.0% |
| ! | AGTGGTTCTACCAAAAATGC+CGG | - | tig0021157:11863-11882 | Msa1388650:CDS | 40.0% |
| ! | TAAAATCGACCCGGCATTTT+TGG | + | tig0021157:11876-11895 | None:intergenic | 40.0% |
| GGGAAGCCTATAAGAATGAA+AGG | - | tig0021157:11906-11925 | Msa1388650:CDS | 40.0% | |
| GCCTATAAGAATGAAAGGCA+TGG | - | tig0021157:11911-11930 | Msa1388650:CDS | 40.0% | |
| CAACTTCAGACTTAATCTGC+AGG | + | tig0021157:11977-11996 | None:intergenic | 40.0% | |
| TTACTTGATCAAGAAGAGGG+AGG | - | tig0021157:12010-12029 | Msa1388650:five_prime_UTR | 40.0% | |
| ! | GGGGTTTGATCATTTTCAGA+AGG | + | tig0021157:12086-12105 | None:intergenic | 40.0% |
| !! | TGGGTTGATATGAAGGAAGG+AGG | - | tig0021157:6064-6083 | Msa1388650:three_prime_UTR | 45.0% |
| GATGAGGAGAGCGAAAATGA+AGG | + | tig0021157:6179-6198 | None:intergenic | 45.0% | |
| GAAGGAACCTTACCGTTCAA+TGG | + | tig0021157:6506-6525 | None:intergenic | 45.0% | |
| !! | AAGTTGGGTTGACACCACTT+TGG | - | tig0021157:6585-6604 | Msa1388650:CDS | 45.0% |
| !! | AGTTGGGTTGACACCACTTT+GGG | - | tig0021157:6586-6605 | Msa1388650:CDS | 45.0% |
| !! | TTGACACCACTTTGGGATGA+TGG | - | tig0021157:6593-6612 | Msa1388650:CDS | 45.0% |
| !! | TGACACCACTTTGGGATGAT+GGG | - | tig0021157:6594-6613 | Msa1388650:CDS | 45.0% |
| !! | CACTTTGGGATGATGGGTAT+GGG | - | tig0021157:6600-6619 | Msa1388650:CDS | 45.0% |
| TCAATTGGGCAAAACCAACG+TGG | + | tig0021157:6689-6708 | None:intergenic | 45.0% | |
| ACATAAGGGTGGGAGAATCT+TGG | + | tig0021157:6727-6746 | None:intergenic | 45.0% | |
| CCAGGTAGAAACATAAGGGT+GGG | + | tig0021157:6737-6756 | None:intergenic | 45.0% | |
| ACCAGGTAGAAACATAAGGG+TGG | + | tig0021157:6738-6757 | None:intergenic | 45.0% | |
| GATTGGGAAGATGTAGGAGA+AGG | - | tig0021157:7249-7268 | Msa1388650:intron | 45.0% | |
| CATACTTGGCAAGAGCTTGA+TGG | + | tig0021157:7392-7411 | None:intergenic | 45.0% | |
| GAATCGCCGACGAGATAAAT+TGG | + | tig0021157:8080-8099 | None:intergenic | 45.0% | |
| ATCAACCGTTGGATTACGAG+CGG | + | tig0021157:8132-8151 | None:intergenic | 45.0% | |
| ACAACACTGATAGACTCACC+AGG | + | tig0021157:8176-8195 | None:intergenic | 45.0% | |
| AGGATGTAGCTGTGGTTGAA+AGG | + | tig0021157:8278-8297 | None:intergenic | 45.0% | |
| TCAACCACAGCTACATCCTT+CGG | - | tig0021157:8279-8298 | Msa1388650:intron | 45.0% | |
| TTGCAACTGAGATCTACCGA+AGG | + | tig0021157:8298-8317 | None:intergenic | 45.0% | |
| GCCTCCAAGATAGGTAACAA+TGG | + | tig0021157:8321-8340 | None:intergenic | 45.0% | |
| GACATGGCAGCAATGAAGTA+AGG | + | tig0021157:8657-8676 | None:intergenic | 45.0% | |
| TCTGATCTATTGTCAGGAGC+TGG | - | tig0021157:8929-8948 | Msa1388650:intron | 45.0% | |
| ! | CTGAAGTACTTGTGCTTGCT+AGG | - | tig0021157:9045-9064 | Msa1388650:CDS | 45.0% |
| CCGTTGCACATACCAAAAGA+AGG | + | tig0021157:9311-9330 | None:intergenic | 45.0% | |
| GTAGTGCAGGAAGATTGCAT+TGG | - | tig0021157:9733-9752 | Msa1388650:intron | 45.0% | |
| AATCATGCCTCCTTGTACGA+CGG | + | tig0021157:9792-9811 | None:intergenic | 45.0% | |
| CTGAATTCTGTCATACTGGG+GGG | + | tig0021157:9832-9851 | None:intergenic | 45.0% | |
| ATCTTTAAGCCCACTACCAG+GGG | + | tig0021157:10269-10288 | None:intergenic | 45.0% | |
| CATCTTTAAGCCCACTACCA+GGG | + | tig0021157:10270-10289 | None:intergenic | 45.0% | |
| TCATCTTTAAGCCCACTACC+AGG | + | tig0021157:10271-10290 | None:intergenic | 45.0% | |
| TGATCCCGAATACATCACGA+TGG | + | tig0021157:10294-10313 | None:intergenic | 45.0% | |
| ATACAAAACCGGAAGGCTAC+TGG | - | tig0021157:10419-10438 | Msa1388650:intron | 45.0% | |
| GTTACATACCAGTAGCCTTC+CGG | + | tig0021157:10430-10449 | None:intergenic | 45.0% | |
| ! | GAAGGTCCTGTCTTATTCGT+CGG | - | tig0021157:10634-10653 | Msa1388650:intron | 45.0% |
| ! | CGTCGGTTATCACATGTTGA+TGG | - | tig0021157:10651-10670 | Msa1388650:intron | 45.0% |
| !! | AGAAGGGTATTGCTCTTCGT+GGG | - | tig0021157:10713-10732 | Msa1388650:intron | 45.0% |
| TCTCACGTTCTCCTATATCC+CGG | - | tig0021157:10868-10887 | Msa1388650:intron | 45.0% | |
| ! | ACGTGAGGCTCTCCATTTTA+AGG | - | tig0021157:10897-10916 | Msa1388650:CDS | 45.0% |
| GCTGCCATTCTCACAAATTC+TGG | + | tig0021157:11274-11293 | None:intergenic | 45.0% | |
| !! | ATTGTGCCATTTGGAGCTGT+AGG | - | tig0021157:11310-11329 | Msa1388650:intron | 45.0% |
| !! | AATCAAGCCTTGTTGTGGAG+AGG | - | tig0021157:11576-11595 | Msa1388650:CDS | 45.0% |
| GTTCATTCCTCTCCACAACA+AGG | + | tig0021157:11586-11605 | None:intergenic | 45.0% | |
| ACCTTCAGAGATGAGAACAG+TGG | - | tig0021157:11810-11829 | Msa1388650:CDS | 45.0% | |
| TCCACTGTTCTCATCTCTGA+AGG | + | tig0021157:11814-11833 | None:intergenic | 45.0% | |
| !!! | GGCATTTTTGGTAGAACCAC+TGG | + | tig0021157:11864-11883 | None:intergenic | 45.0% |
| ! | GTGGTTCTACCAAAAATGCC+GGG | - | tig0021157:11864-11883 | Msa1388650:CDS | 45.0% |
| !!! | TACTATAATATTTTTAATTA+AGG | + | tig0021157:7210-7229 | None:intergenic | 5.0% |
| CCATACCCATCATCCCAAAG+TGG | + | tig0021157:6602-6621 | None:intergenic | 50.0% | |
| !! | CCACTTTGGGATGATGGGTA+TGG | - | tig0021157:6599-6618 | Msa1388650:CDS | 50.0% |
| TTGGGCAAAACCAACGTGGT+GGG | + | tig0021157:6685-6704 | None:intergenic | 50.0% | |
| ATTGGGCAAAACCAACGTGG+TGG | + | tig0021157:6686-6705 | None:intergenic | 50.0% | |
| AGGGTGGGAGAATCTTGGAA+AGG | + | tig0021157:6722-6741 | None:intergenic | 50.0% | |
| ! | CCCACCCTTATGTTTCTACC+TGG | - | tig0021157:6734-6753 | Msa1388650:intron | 50.0% |
| !! | GAGCTTGATGGTGCAAAGAG+AGG | + | tig0021157:7380-7399 | None:intergenic | 50.0% |
| TATCTCGTCGGCGATTCCTT+AGG | - | tig0021157:8083-8102 | Msa1388650:intron | 50.0% | |
| TCTACCGAAGGATGTAGCTG+TGG | + | tig0021157:8286-8305 | None:intergenic | 50.0% | |
| TCAGGCAAAGCCTCCAAGAT+AGG | + | tig0021157:8330-8349 | None:intergenic | 50.0% | |
| ! | CAATGGGCACACCCTTCTTT+TGG | - | tig0021157:9296-9315 | Msa1388650:CDS | 50.0% |
| CTTGCATGTACCGTCGTACA+AGG | - | tig0021157:9779-9798 | Msa1388650:intron | 50.0% | |
| ATTCTGTCATACTGGGGGGA+AGG | + | tig0021157:9828-9847 | None:intergenic | 50.0% | |
| GAAAAGACGGAAATCACCCC+TGG | - | tig0021157:10250-10269 | Msa1388650:CDS | 50.0% | |
| CTGTCTGGTGTTCCAGATGA+AGG | - | tig0021157:10616-10635 | Msa1388650:intron | 50.0% | |
| !! | CAGAAGGGTATTGCTCTTCG+TGG | - | tig0021157:10712-10731 | Msa1388650:intron | 50.0% |
| GCCCATCCTGATCTGTTTAC+AGG | - | tig0021157:10739-10758 | Msa1388650:intron | 50.0% | |
| !! | GATTGGGTGAAGGTATTCGG+CGG | - | tig0021157:10799-10818 | Msa1388650:intron | 50.0% |
| !! | ATTGGGTGAAGGTATTCGGC+GGG | - | tig0021157:10800-10819 | Msa1388650:intron | 50.0% |
| GTGAGAATGGCAGCACGATT+CGG | - | tig0021157:11280-11299 | Msa1388650:intron | 50.0% | |
| AGCTCCAAATGGCACAATCG+TGG | + | tig0021157:11308-11327 | None:intergenic | 50.0% | |
| TCTTCGCCTACAGCTCCAAA+TGG | + | tig0021157:11319-11338 | None:intergenic | 50.0% | |
| CTGAGGTAATCGCTGACAAC+TGG | + | tig0021157:11684-11703 | None:intergenic | 50.0% | |
| CAGAGATGAGAACAGTGGAG+AGG | - | tig0021157:11815-11834 | Msa1388650:CDS | 50.0% | |
| AGATGAGAACAGTGGAGAGG+TGG | - | tig0021157:11818-11837 | Msa1388650:CDS | 50.0% | |
| CTTGATCAAGAAGAGGGAGG+AGG | - | tig0021157:12013-12032 | Msa1388650:five_prime_UTR | 50.0% | |
| AGAGGGAGGAGGATCCTTAT+AGG | - | tig0021157:12024-12043 | Msa1388650:five_prime_UTR | 50.0% | |
| CGAGGGACGAAGTAACGGTA+CGG | + | tig0021157:6970-6989 | None:intergenic | 55.0% | |
| ATTGCAGGGATGGATGGCAC+TGG | - | tig0021157:7348-7367 | Msa1388650:intron | 55.0% | |
| ! | AGGGATGGATGGCACTGGAT+CGG | - | tig0021157:7353-7372 | Msa1388650:intron | 55.0% |
| ! | GAGTGCAAGGCATCCACCTA+AGG | + | tig0021157:8102-8121 | None:intergenic | 55.0% |
| CGTTGGATTACGAGCGGCAA+CGG | + | tig0021157:8126-8145 | None:intergenic | 55.0% | |
| CGTTGCCGCTCGTAATCCAA+CGG | - | tig0021157:8124-8143 | Msa1388650:intron | 55.0% | |
| ! | TGTGCTCTGCATGGTAGTGC+AGG | - | tig0021157:9720-9739 | Msa1388650:intron | 55.0% |
| GCATGTACCGTCGTACAAGG+AGG | - | tig0021157:9782-9801 | Msa1388650:intron | 55.0% | |
| ACGGAAATCACCCCTGGTAG+TGG | - | tig0021157:10256-10275 | Msa1388650:CDS | 55.0% | |
| CGGAAATCACCCCTGGTAGT+GGG | - | tig0021157:10257-10276 | Msa1388650:CDS | 55.0% | |
| !! | TTGGGTGAAGGTATTCGGCG+GGG | - | tig0021157:10801-10820 | Msa1388650:intron | 55.0% |
| CACGTTCTCCTATATCCCGG+TGG | - | tig0021157:10871-10890 | Msa1388650:intron | 55.0% | |
| ! | GGTGCCACGATTGTGCCATT+TGG | - | tig0021157:11301-11320 | Msa1388650:intron | 55.0% |
| !! | TTGATGGTGGCCCACCACGT+TGG | - | tig0021157:6672-6691 | Msa1388650:intron | 60.0% |
| ! | GGGATGGATGGCACTGGATC+GGG | - | tig0021157:7354-7373 | Msa1388650:intron | 60.0% |
| CTCGTCGGCGATTCCTTAGG+TGG | - | tig0021157:8086-8105 | Msa1388650:intron | 60.0% | |
| CACGTGCACCACCGGGATAT+AGG | + | tig0021157:10882-10901 | None:intergenic | 60.0% | |
| ATATCCCGGTGGTGCACGTG+AGG | - | tig0021157:10882-10901 | Msa1388650:intron | 60.0% | |
| AGAGCCTCACGTGCACCACC+GGG | + | tig0021157:10889-10908 | None:intergenic | 65.0% | |
| GAGAGCCTCACGTGCACCAC+CGG | + | tig0021157:10890-10909 | None:intergenic | 65.0% | |
| GAGCGGCAACGGCGAGTGCA+AGG | + | tig0021157:8115-8134 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021157 | gene | 6031 | 12269 | 6031 | ID=Msa1388650;Name=Msa1388650 |
| tig0021157 | mRNA | 6031 | 12269 | 6031 | ID=Msa1388650-mRNA-1;Parent=Msa1388650;Name=Msa1388650-mRNA-1;_AED=0.14;_eAED=0.14;_QI=312|1|1|1|0.92|0.85|14|148|701 |
| tig0021157 | exon | 6031 | 6482 | 6031 | ID=Msa1388650-mRNA-1:exon:11285;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 6567 | 6652 | 6567 | ID=Msa1388650-mRNA-1:exon:11284;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 6949 | 7062 | 6949 | ID=Msa1388650-mRNA-1:exon:11283;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 7382 | 7751 | 7382 | ID=Msa1388650-mRNA-1:exon:11282;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 8425 | 8558 | 8425 | ID=Msa1388650-mRNA-1:exon:11281;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 8983 | 9091 | 8983 | ID=Msa1388650-mRNA-1:exon:11280;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 9234 | 9355 | 9234 | ID=Msa1388650-mRNA-1:exon:11279;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 9619 | 9725 | 9619 | ID=Msa1388650-mRNA-1:exon:11278;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 9907 | 10011 | 9907 | ID=Msa1388650-mRNA-1:exon:11277;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 10124 | 10282 | 10124 | ID=Msa1388650-mRNA-1:exon:11276;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 10674 | 10729 | 10674 | ID=Msa1388650-mRNA-1:exon:11275;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 10894 | 10945 | 10894 | ID=Msa1388650-mRNA-1:exon:11274;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 11545 | 12214 | 11545 | ID=Msa1388650-mRNA-1:exon:11273;Parent=Msa1388650-mRNA-1 |
| tig0021157 | exon | 12240 | 12269 | 12240 | ID=Msa1388650-mRNA-1:exon:11272;Parent=Msa1388650-mRNA-1 |
| tig0021157 | five_prime_UTR | 12240 | 12269 | 12240 | ID=Msa1388650-mRNA-1:five_prime_utr;Parent=Msa1388650-mRNA-1 |
| tig0021157 | five_prime_UTR | 11933 | 12214 | 11933 | ID=Msa1388650-mRNA-1:five_prime_utr;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 11545 | 11932 | 11545 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 10894 | 10945 | 10894 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 10674 | 10729 | 10674 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 10124 | 10282 | 10124 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 9907 | 10011 | 9907 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 9619 | 9725 | 9619 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 9234 | 9355 | 9234 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 8983 | 9091 | 8983 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 8425 | 8558 | 8425 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 7382 | 7751 | 7382 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 6949 | 7062 | 6949 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 6567 | 6652 | 6567 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | CDS | 6179 | 6482 | 6179 | ID=Msa1388650-mRNA-1:cds;Parent=Msa1388650-mRNA-1 |
| tig0021157 | three_prime_UTR | 6031 | 6178 | 6031 | ID=Msa1388650-mRNA-1:three_prime_utr;Parent=Msa1388650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
