Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129080 | XP_003626371.2 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129080 | sp|Q9ZVN2|PES1_ARATH | 65.815 | 626 | 208 | 4 | 79 | 701 | 82 | 704 | 0.0 | 861 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129080 | G7L0R8 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1083800 | Msa1129080 | 0.977962 | 7.688033e-145 | -8.615850e-47 |
| Msa1129080 | Msa1388650 | 0.998953 | 2.525811e-283 | -8.615850e-47 |
| Msa0575380 | Msa1129080 | -0.813137 | 2.980529e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129080 | MtrunA17_Chr7g0273621 | 94.545 | 715 | 25 | 1 | 1 | 701 | 1 | 715 | 0.0 | 1387 |
| Msa1129080 | MtrunA17_Chr7g0251571 | 53.106 | 644 | 286 | 5 | 60 | 700 | 66 | 696 | 0.0 | 689 |
| Msa1129080 | MtrunA17_Chr7g0251541 | 50.920 | 652 | 300 | 5 | 51 | 700 | 37 | 670 | 0.0 | 663 |
| Msa1129080 | MtrunA17_Chr7g0251561 | 45.710 | 606 | 259 | 5 | 131 | 699 | 4 | 576 | 3.37e-178 | 521 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129080 | AT1G54570.1 | 65.815 | 626 | 208 | 4 | 79 | 701 | 82 | 704 | 0.0 | 861 |
| Msa1129080 | AT3G26840.1 | 47.239 | 652 | 327 | 6 | 62 | 699 | 51 | 699 | 0.0 | 584 |
| Msa1129080 | AT3G02030.2 | 47.812 | 617 | 312 | 6 | 87 | 699 | 54 | 664 | 0.0 | 579 |
| Msa1129080 | AT5G41130.1 | 47.240 | 616 | 320 | 3 | 87 | 699 | 70 | 683 | 0.0 | 577 |
| Msa1129080 | AT5G41120.3 | 46.104 | 616 | 327 | 3 | 87 | 699 | 71 | 684 | 0.0 | 575 |
| Msa1129080 | AT5G41120.1 | 46.429 | 616 | 320 | 5 | 87 | 699 | 71 | 679 | 0.0 | 569 |
| Msa1129080 | AT3G02030.1 | 47.164 | 617 | 312 | 7 | 87 | 699 | 54 | 660 | 0.0 | 567 |
| Msa1129080 | AT5G41130.3 | 45.186 | 644 | 320 | 4 | 87 | 699 | 70 | 711 | 0.0 | 561 |
| Msa1129080 | AT5G41130.2 | 45.853 | 639 | 318 | 6 | 87 | 699 | 70 | 706 | 0.0 | 561 |
| Msa1129080 | AT5G41120.2 | 45.729 | 597 | 321 | 3 | 104 | 699 | 6 | 600 | 0.0 | 536 |
| Msa1129080 | AT3G26820.1 | 45.724 | 608 | 290 | 6 | 96 | 699 | 61 | 632 | 5.79e-167 | 494 |
| Msa1129080 | AT3G26820.2 | 44.275 | 524 | 254 | 4 | 96 | 616 | 61 | 549 | 1.08e-142 | 429 |
Find 185 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAAAATCCGTATCTTTA+AGG | 0.153897 | 7_3:-80986515 | Msa1129080:CDS |
| CCACTGGAAATGACAGATTT+TGG | 0.182916 | 7_3:+80983942 | None:intergenic |
| ACGAGATAAATTGGCTTCTT+TGG | 0.195096 | 7_3:+80987719 | None:intergenic |
| TGATCTGTTTACAGGAAAAT+TGG | 0.200570 | 7_3:-80985040 | Msa1129080:CDS |
| ATTTCTTCTTAGTTTCATTA+TGG | 0.233368 | 7_3:-80987416 | Msa1129080:CDS |
| TTTATGTAATCATAATTATT+TGG | 0.242013 | 7_3:-80983630 | Msa1129080:three_prime_UTR |
| CTATCAATTAAATTCCTATA+AGG | 0.256262 | 7_3:+80983749 | None:intergenic |
| ATCAAACTTGCAAATATCTT+TGG | 0.258010 | 7_3:+80989133 | None:intergenic |
| CGAGATAAATTGGCTTCTTT+GGG | 0.258614 | 7_3:+80987720 | None:intergenic |
| TTTCACTTGCCGTTCATTCA+TGG | 0.261252 | 7_3:-80989438 | Msa1129080:exon |
| AAAGATGATGCACCTTAAAA+TGG | 0.279230 | 7_3:+80984878 | None:intergenic |
| ATTCATGGCTTCAGCAATAA+TGG | 0.279843 | 7_3:-80989423 | Msa1129080:exon |
| GCTGCCATTCTCACAAATTC+TGG | 0.282965 | 7_3:+80984516 | None:intergenic |
| TCCATGCCTTTCATTCTTAT+AGG | 0.291334 | 7_3:+80983875 | None:intergenic |
| GTGAAGAATACAAATTGTTT+TGG | 0.302991 | 7_3:-80984548 | Msa1129080:CDS |
| CTTATAGGAATTTAATTGAT+AGG | 0.310563 | 7_3:-80983748 | Msa1129080:CDS |
| GCAACCATTGTTACCTATCT+TGG | 0.312735 | 7_3:-80987473 | Msa1129080:CDS |
| GCCCATCCTGATCTGTTTAC+AGG | 0.312976 | 7_3:-80985048 | Msa1129080:CDS |
| CAATGGGCACACCCTTCTTT+TGG | 0.314196 | 7_3:-80986491 | Msa1129080:intron |
| TTTCTTCTTAGTTTCATTAT+GGG | 0.316075 | 7_3:-80987415 | Msa1129080:intron |
| TTATCATGTATGAATGTATA+TGG | 0.317283 | 7_3:+80989530 | None:intergenic |
| TACCAAAGGACACTCTTCTT+TGG | 0.317894 | 7_3:-80986826 | Msa1129080:CDS |
| GAATCGCCGACGAGATAAAT+TGG | 0.330647 | 7_3:+80987710 | None:intergenic |
| ATTGATTGGGTGAAGGTATT+CGG | 0.331739 | 7_3:-80984991 | Msa1129080:CDS |
| AATTGATAGGAAAATGTATC+AGG | 0.341683 | 7_3:-80983735 | Msa1129080:CDS |
| AGATTATTTCGTTCTGTTAC+CGG | 0.342350 | 7_3:-80985240 | Msa1129080:CDS |
| GGGATGGATGGCACTGGATC+GGG | 0.349194 | 7_3:-80988433 | Msa1129080:CDS |
| GAGGATGGAAAGATAGTAAA+AGG | 0.351214 | 7_3:-80985195 | Msa1129080:CDS |
| AAAAGATTGCTTGCTGAAAC+AGG | 0.353843 | 7_3:+80984961 | None:intergenic |
| CATTAGTCAATATCGAAAAT+AGG | 0.354831 | 7_3:-80987194 | Msa1129080:CDS |
| GCTTCAGCAATAATGGGTTT+TGG | 0.356044 | 7_3:-80989416 | Msa1129080:CDS |
| ACAGTTACATGTAGTTCTTC+AGG | 0.357831 | 7_3:+80987442 | None:intergenic |
| AAAGATATTTGCAAGTTTGA+TGG | 0.365945 | 7_3:-80989131 | Msa1129080:CDS |
| ATATCTGAATTCTGTCATAC+TGG | 0.375380 | 7_3:+80985954 | None:intergenic |
| GGTGCCACGATTGTGCCATT+TGG | 0.379938 | 7_3:-80984486 | Msa1129080:CDS |
| AGTTGTTCAATTATCTTTGT+AGG | 0.381783 | 7_3:+80987165 | None:intergenic |
| TATCTCGTCGGCGATTCCTT+AGG | 0.386203 | 7_3:-80987704 | Msa1129080:CDS |
| TTCATGGCTTCAGCAATAAT+GGG | 0.387693 | 7_3:-80989422 | Msa1129080:CDS |
| AAAGGAGAAGCACATTCAAT+TGG | 0.389488 | 7_3:+80989086 | None:intergenic |
| AGAGGGAGGAGGATCCTTAT+AGG | 0.391376 | 7_3:-80983763 | Msa1129080:CDS |
| ACTTAATCTGCAGGTACAAT+TGG | 0.394476 | 7_3:+80983822 | None:intergenic |
| TTGACACCACTTTGGGATGA+TGG | 0.400001 | 7_3:-80989194 | Msa1129080:CDS |
| AATGAAGCTCAAAGACTTGC+GGG | 0.401301 | 7_3:-80986550 | Msa1129080:CDS |
| CTGAGGTAATCGCTGACAAC+TGG | 0.411724 | 7_3:+80984106 | None:intergenic |
| AGTTGGGTTGACACCACTTT+GGG | 0.412258 | 7_3:-80989201 | Msa1129080:CDS |
| ATAATGAAACTAAGAAGAAA+TGG | 0.413027 | 7_3:+80987418 | None:intergenic |
| ATCGAGACTCGGTTAAGATT+AGG | 0.419884 | 7_3:-80984075 | Msa1129080:intron |
| AGTAAGAATGAAGAACAAGT+TGG | 0.420093 | 7_3:-80989218 | Msa1129080:CDS |
| CTCACAAATTCTGGATGATC+AGG | 0.424559 | 7_3:+80984525 | None:intergenic |
| TCAGGCAAAGCCTCCAAGAT+AGG | 0.439168 | 7_3:+80987460 | None:intergenic |
| AGGGATGGATGGCACTGGAT+CGG | 0.439257 | 7_3:-80988434 | Msa1129080:CDS |
| ACATAAGGGTGGGAGAATCT+TGG | 0.440128 | 7_3:+80989063 | None:intergenic |
| CTGAAGTACTTGTGCTTGCT+AGG | 0.441839 | 7_3:-80986742 | Msa1129080:intron |
| CATACTTGGCAAGAGCTTGA+TGG | 0.448253 | 7_3:+80988398 | None:intergenic |
| GAGAGCCTCACGTGCACCAC+CGG | 0.449620 | 7_3:+80984900 | None:intergenic |
| TTCCAAAGAAGAGTGTCCTT+TGG | 0.451205 | 7_3:+80986824 | None:intergenic |
| TTGACTAATGCCATCTTCAA+TGG | 0.453847 | 7_3:+80987207 | None:intergenic |
| TCCGTATCTTTAAGGACAAT+GGG | 0.454445 | 7_3:-80986507 | Msa1129080:CDS |
| AATGGTGTTCGATCATGAAC+AGG | 0.454903 | 7_3:+80988188 | None:intergenic |
| CCCACCCTTATGTTTCTACC+TGG | 0.455529 | 7_3:-80989053 | Msa1129080:intron |
| CGTCGGTTATCACATGTTGA+TGG | 0.455926 | 7_3:-80985136 | Msa1129080:CDS |
| CCACTTTGGGATGATGGGTA+TGG | 0.460295 | 7_3:-80989188 | Msa1129080:CDS |
| GAAGGAACCTTACCGTTCAA+TGG | 0.464192 | 7_3:+80989284 | None:intergenic |
| CATGATCGAACACCATTTGA+AGG | 0.467533 | 7_3:-80988182 | Msa1129080:intron |
| GTGAGAATGGCAGCACGATT+CGG | 0.472364 | 7_3:-80984507 | Msa1129080:CDS |
| ACTTACCAGGTAGAAACATA+AGG | 0.474260 | 7_3:+80989048 | None:intergenic |
| GTAAGAATGAAGAACAAGTT+GGG | 0.477693 | 7_3:-80989217 | Msa1129080:CDS |
| AAGATAGTAAAAGGTCTGTC+TGG | 0.479324 | 7_3:-80985186 | Msa1129080:CDS |
| ATCCGTATCTTTAAGGACAA+TGG | 0.480139 | 7_3:-80986508 | Msa1129080:CDS |
| GAGCGGCAACGGCGAGTGCA+AGG | 0.490514 | 7_3:+80987675 | None:intergenic |
| CTGTCTGGTGTTCCAGATGA+AGG | 0.491069 | 7_3:-80985171 | Msa1129080:CDS |
| AATAAGACAGGACCTTCATC+TGG | 0.491280 | 7_3:+80985159 | None:intergenic |
| ACCATTGTTACCTATCTTGG+AGG | 0.492576 | 7_3:-80987470 | Msa1129080:CDS |
| GACATGGCAGCAATGAAGTA+AGG | 0.493972 | 7_3:+80987133 | None:intergenic |
| GCCCATTGTCCTTAAAGATA+CGG | 0.494183 | 7_3:+80986506 | None:intergenic |
| ATGAAGGCAACAAATAGAAA+AGG | 0.494795 | 7_3:+80989627 | None:intergenic |
| TCAACCACAGCTACATCCTT+CGG | 0.496112 | 7_3:-80987508 | Msa1129080:intron |
| CACGTGCACCACCGGGATAT+AGG | 0.496494 | 7_3:+80984908 | None:intergenic |
| TCATCCAGAATTTGTGAGAA+TGG | 0.497949 | 7_3:-80984520 | Msa1129080:CDS |
| ATCTGTGATGTTCTCTACAT+TGG | 0.498726 | 7_3:-80985217 | Msa1129080:CDS |
| AAGGAGAAGCACATTCAATT+GGG | 0.499725 | 7_3:+80989087 | None:intergenic |
| TATGCAATGGATCGACTAGT+TGG | 0.500299 | 7_3:-80985934 | Msa1129080:CDS |
| TCCATTGTATATATAAATGA+AGG | 0.500794 | 7_3:+80983548 | None:intergenic |
| GTCGGTTATCACATGTTGAT+GGG | 0.500850 | 7_3:-80985135 | Msa1129080:CDS |
| ATTGGGTGAAGGTATTCGGC+GGG | 0.507706 | 7_3:-80984987 | Msa1129080:CDS |
| TGACACCACTTTGGGATGAT+GGG | 0.508012 | 7_3:-80989193 | Msa1129080:CDS |
| TCTTTGAGCTTCATTTACAC+TGG | 0.509924 | 7_3:+80986558 | None:intergenic |
| TTAATTATTGCAGGGATGGA+TGG | 0.511467 | 7_3:-80988445 | Msa1129080:intron |
| TTCTATGATTGATTGGGTGA+AGG | 0.512581 | 7_3:-80984998 | Msa1129080:CDS |
| TGGAAGCTGATTAATATATG+TGG | 0.514540 | 7_3:-80983610 | Msa1129080:three_prime_UTR |
| CTCGTCGGCGATTCCTTAGG+TGG | 0.519484 | 7_3:-80987701 | Msa1129080:CDS |
| CAGAAGGGTATTGCTCTTCG+TGG | 0.519495 | 7_3:-80985075 | Msa1129080:CDS |
| TCCTGTAAACAGATCAGGAT+GGG | 0.520965 | 7_3:+80985047 | None:intergenic |
| ATGCAATGGATCGACTAGTT+GGG | 0.523954 | 7_3:-80985933 | Msa1129080:intron |
| CGTTGGATTACGAGCGGCAA+CGG | 0.525743 | 7_3:+80987664 | None:intergenic |
| CTTTGAGCTTCATTTACACT+GGG | 0.527339 | 7_3:+80986559 | None:intergenic |
| CCGTTGCACATACCAAAAGA+AGG | 0.527342 | 7_3:+80986479 | None:intergenic |
| ATCAGGTGATCCATTGAAGA+TGG | 0.530726 | 7_3:-80987217 | Msa1129080:intron |
| TGGTCTTCTAACAATCATCA+AGG | 0.531724 | 7_3:-80986034 | Msa1129080:CDS |
| TATCTGAATTCTGTCATACT+GGG | 0.531731 | 7_3:+80985955 | None:intergenic |
| TCCTTCATTTATATATACAA+TGG | 0.531906 | 7_3:-80983549 | Msa1129080:three_prime_UTR |
| TGTTCAATTATCTTTGTAGG+AGG | 0.532418 | 7_3:+80987168 | None:intergenic |
| ATCTGATCCATTGAACGGTA+AGG | 0.532947 | 7_3:-80989291 | Msa1129080:CDS |
| AAGTTGGGTTGACACCACTT+TGG | 0.533670 | 7_3:-80989202 | Msa1129080:CDS |
| CTTGCATGTACCGTCGTACA+AGG | 0.535922 | 7_3:-80986008 | Msa1129080:CDS |
| AGATGAATTTCTAAGTCAGA+AGG | 0.538688 | 7_3:-80985091 | Msa1129080:CDS |
| CACTTTGGGATGATGGGTAT+GGG | 0.540619 | 7_3:-80989187 | Msa1129080:CDS |
| TGTAGAGAACATCACAGATC+CGG | 0.544185 | 7_3:+80985221 | None:intergenic |
| GTTCAATTATCTTTGTAGGA+GGG | 0.544418 | 7_3:+80987169 | None:intergenic |
| GACAGAATTCAGATATGCAA+TGG | 0.548861 | 7_3:-80985947 | Msa1129080:CDS |
| GAGTGCAAGGCATCCACCTA+AGG | 0.552903 | 7_3:+80987688 | None:intergenic |
| AGATGAGAACAGTGGAGAGG+TGG | 0.553794 | 7_3:-80983969 | Msa1129080:CDS |
| GGGAAGCCTATAAGAATGAA+AGG | 0.554340 | 7_3:-80983881 | Msa1129080:CDS |
| TTAGTAGAAAGCAATAAAGA+AGG | 0.556541 | 7_3:+80989266 | None:intergenic |
| CAACTTCAGACTTAATCTGC+AGG | 0.561313 | 7_3:+80983813 | None:intergenic |
| GAAACTATGTACTAAAACAT+GGG | 0.564538 | 7_3:+80989589 | None:intergenic |
| GCCTATAAGAATGAAAGGCA+TGG | 0.566613 | 7_3:-80983876 | Msa1129080:CDS |
| TGTGATGTTCTCTACATTGG+AGG | 0.567193 | 7_3:-80985214 | Msa1129080:CDS |
| AATCATGCCTCCTTGTACGA+CGG | 0.569230 | 7_3:+80985998 | None:intergenic |
| ATTGTGCCATTTGGAGCTGT+AGG | 0.569928 | 7_3:-80984477 | Msa1129080:CDS |
| GAAGGTCCTGTCTTATTCGT+CGG | 0.569980 | 7_3:-80985153 | Msa1129080:CDS |
| TCTTCGCCTACAGCTCCAAA+TGG | 0.571096 | 7_3:+80984471 | None:intergenic |
| ATTGCAGGGATGGATGGCAC+TGG | 0.577418 | 7_3:-80988439 | Msa1129080:intron |
| TATCATGTATGAATGTATAT+GGG | 0.582186 | 7_3:+80989531 | None:intergenic |
| GATATTTGCAAGTTTGATGG+TGG | 0.583362 | 7_3:-80989128 | Msa1129080:CDS |
| ATGTACTAAAACATGGGATG+AGG | 0.583820 | 7_3:+80989595 | None:intergenic |
| ATATCCCGGTGGTGCACGTG+AGG | 0.584040 | 7_3:-80984905 | Msa1129080:CDS |
| AGAGCCTCACGTGCACCACC+GGG | 0.584102 | 7_3:+80984901 | None:intergenic |
| GATGAATTTCTAAGTCAGAA+GGG | 0.585083 | 7_3:-80985090 | Msa1129080:CDS |
| CCAAAATCTGTCATTTCCAG+TGG | 0.585774 | 7_3:-80983942 | Msa1129080:CDS |
| GATGAGGAGAGCGAAAATGA+AGG | 0.589228 | 7_3:+80989611 | None:intergenic |
| TGAAACTATGTACTAAAACA+TGG | 0.592714 | 7_3:+80989588 | None:intergenic |
| CTTGATCAAGAAGAGGGAGG+AGG | 0.593122 | 7_3:-80983774 | Msa1129080:CDS |
| GAGATAAATTGGCTTCTTTG+GGG | 0.596702 | 7_3:+80987721 | None:intergenic |
| CAGAGATGTTAATCGAGACT+CGG | 0.599945 | 7_3:-80984086 | Msa1129080:CDS |
| TTGCTGAAGCCATGAATGAA+CGG | 0.600837 | 7_3:+80989429 | None:intergenic |
| TCTCACGTTCTCCTATATCC+CGG | 0.601456 | 7_3:-80984919 | Msa1129080:CDS |
| AGAAGGGTATTGCTCTTCGT+GGG | 0.601779 | 7_3:-80985074 | Msa1129080:CDS |
| GGAAGCTGATTAATATATGT+GGG | 0.602768 | 7_3:-80983609 | Msa1129080:three_prime_UTR |
| GCCTCCAAGATAGGTAACAA+TGG | 0.604258 | 7_3:+80987469 | None:intergenic |
| CTTACCAGGTAGAAACATAA+GGG | 0.606155 | 7_3:+80989049 | None:intergenic |
| CGTTGCCGCTCGTAATCCAA+CGG | 0.606482 | 7_3:-80987663 | Msa1129080:CDS |
| TAGATTACTTGATCAAGAAG+AGG | 0.608659 | 7_3:-80983781 | Msa1129080:CDS |
| AAATGAAGCTCAAAGACTTG+CGG | 0.609451 | 7_3:-80986551 | Msa1129080:CDS |
| TGATAACCGACGAATAAGAC+AGG | 0.610814 | 7_3:+80985147 | None:intergenic |
| GATTGGGTGAAGGTATTCGG+CGG | 0.612723 | 7_3:-80984988 | Msa1129080:CDS |
| TTGGGCAAAACCAACGTGGT+GGG | 0.613322 | 7_3:+80989105 | None:intergenic |
| GAGCTTGATGGTGCAAAGAG+AGG | 0.616096 | 7_3:+80988410 | None:intergenic |
| AAGGAGGCATGATTTAGTCA+TGG | 0.617280 | 7_3:-80985989 | Msa1129080:CDS |
| TCTGAATCTGATCCATTGAA+CGG | 0.618967 | 7_3:-80989296 | Msa1129080:CDS |
| AGATTACTTGATCAAGAAGA+GGG | 0.618969 | 7_3:-80983780 | Msa1129080:CDS |
| CGTTGCACATACCAAAAGAA+GGG | 0.620448 | 7_3:+80986480 | None:intergenic |
| TCTGAATTCTGTCATACTGG+GGG | 0.623747 | 7_3:+80985957 | None:intergenic |
| ACTGGTGAAACTTGTTGAAG+AGG | 0.624233 | 7_3:-80987768 | Msa1129080:CDS |
| AAGAAGCCAATTTATCTCGT+CGG | 0.625584 | 7_3:-80987716 | Msa1129080:CDS |
| ATGTTCTCTACATTGGAGGA+TGG | 0.631466 | 7_3:-80985210 | Msa1129080:CDS |
| CCAGGTAGAAACATAAGGGT+GGG | 0.632821 | 7_3:+80989053 | None:intergenic |
| ATAAGTACTAGATCAACCGT+TGG | 0.633799 | 7_3:+80987647 | None:intergenic |
| ATCTGAATTCTGTCATACTG+GGG | 0.633994 | 7_3:+80985956 | None:intergenic |
| AAGCTTCTTACTGGAAGACA+TGG | 0.639687 | 7_3:+80987117 | None:intergenic |
| AGCTCCAAATGGCACAATCG+TGG | 0.641288 | 7_3:+80984482 | None:intergenic |
| ACCAGGTAGAAACATAAGGG+TGG | 0.642032 | 7_3:+80989052 | None:intergenic |
| ATTGGGCAAAACCAACGTGG+TGG | 0.642947 | 7_3:+80989104 | None:intergenic |
| CCATACCCATCATCCCAAAG+TGG | 0.645222 | 7_3:+80989188 | None:intergenic |
| TTGATGGTGGCCCACCACGT+TGG | 0.645750 | 7_3:-80989115 | Msa1129080:CDS |
| GCTGGCTAATATCATACCAA+AGG | 0.651536 | 7_3:-80986840 | Msa1129080:CDS |
| GGTCTTCTAACAATCATCAA+GGG | 0.655238 | 7_3:-80986033 | Msa1129080:CDS |
| TTCCTGTAAACAGATCAGGA+TGG | 0.656474 | 7_3:+80985046 | None:intergenic |
| CAGAGATGAGAACAGTGGAG+AGG | 0.661717 | 7_3:-80983972 | Msa1129080:CDS |
| CACGTTCTCCTATATCCCGG+TGG | 0.663360 | 7_3:-80984916 | Msa1129080:CDS |
| AGGGTGGGAGAATCTTGGAA+AGG | 0.665715 | 7_3:+80989068 | None:intergenic |
| CAAATAGAAAAGGAAAAGCG+TGG | 0.669973 | 7_3:+80989637 | None:intergenic |
| GTAGTGCAGGAAGATTGCAT+TGG | 0.671325 | 7_3:-80986054 | Msa1129080:intron |
| ATCAACCGTTGGATTACGAG+CGG | 0.673740 | 7_3:+80987658 | None:intergenic |
| CTGAATTCTGTCATACTGGG+GGG | 0.675485 | 7_3:+80985958 | None:intergenic |
| AATAGATAGTAAAATCGACC+CGG | 0.684620 | 7_3:+80983905 | None:intergenic |
| TTACTTGATCAAGAAGAGGG+AGG | 0.689781 | 7_3:-80983777 | Msa1129080:CDS |
| ACCTTCAGAGATGAGAACAG+TGG | 0.690993 | 7_3:-80983977 | Msa1129080:intron |
| GAGTGATAAAGAAAATTACA+CGG | 0.706796 | 7_3:-80989766 | None:intergenic |
| AGCTGATTAATATATGTGGG+TGG | 0.722184 | 7_3:-80983606 | Msa1129080:three_prime_UTR |
| TTGGGTGAAGGTATTCGGCG+GGG | 0.728287 | 7_3:-80984986 | Msa1129080:CDS |
| TCAATTGGGCAAAACCAACG+TGG | 0.730520 | 7_3:+80989101 | None:intergenic |
| AGTCTCGATTAACATCTCTG+AGG | 0.732349 | 7_3:+80984089 | None:intergenic |
| GCATGTACCGTCGTACAAGG+AGG | 0.733690 | 7_3:-80986005 | Msa1129080:CDS |
| TTGCAACTGAGATCTACCGA+AGG | 0.733953 | 7_3:+80987492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACTTTTTTTTTTTTTGA+AGG | + | chr7_3:80984979-80984998 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTAACTCAAAAT+AGG | + | chr7_3:80987716-80987735 | None:intergenic | 10.0% |
| !! | TTTATGTAATCATAATTATT+TGG | - | chr7_3:80989666-80989685 | Msa1129080:five_prime_UTR | 10.0% |
| !! | ATTAAAAAGTTATAGAATTG+AGG | + | chr7_3:80984367-80984386 | None:intergenic | 15.0% |
| !! | CATAAAATCAAAAAACAAAA+AGG | + | chr7_3:80985504-80985523 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTGATTTTATGT+AGG | - | chr7_3:80985505-80985524 | Msa1129080:intron | 15.0% |
| !! | TAAAAACTACTACAAAATAA+GGG | + | chr7_3:80986309-80986328 | None:intergenic | 15.0% |
| !!! | ATACTAATATTGTGTATTTT+TGG | - | chr7_3:80986604-80986623 | Msa1129080:intron | 15.0% |
| !!! | TACTAATATTGTGTATTTTT+GGG | - | chr7_3:80986605-80986624 | Msa1129080:intron | 15.0% |
| !! | TTCCTTAATTAATTAAAGAT+TGG | - | chr7_3:80987588-80987607 | Msa1129080:intron | 15.0% |
| !! | TCTAACTATATAAAATCAAA+TGG | - | chr7_3:80987984-80988003 | Msa1129080:intron | 15.0% |
| !! | AATATTACAAAGAAAATGTA+AGG | + | chr7_3:80988484-80988503 | None:intergenic | 15.0% |
| !! | TGATTGTACTAAATAAAAAA+TGG | - | chr7_3:80989719-80989738 | Msa1129080:intron | 15.0% |
| !!! | AAAGTGTTAGTAATAATGAA+TGG | - | chr7_3:80983553-80983572 | Msa1129080:three_prime_UTR | 20.0% |
| !! | AAGTGTTAGTAATAATGAAT+GGG | - | chr7_3:80983554-80983573 | Msa1129080:three_prime_UTR | 20.0% |
| !! | TATCATGTATGAATGTATAT+GGG | + | chr7_3:80983768-80983787 | None:intergenic | 20.0% |
| !! | TTATCATGTATGAATGTATA+TGG | + | chr7_3:80983769-80983788 | None:intergenic | 20.0% |
| !! | AAAATTAAGAAAGTTTGTAG+TGG | - | chr7_3:80984526-80984545 | Msa1129080:CDS | 20.0% |
| !! | AAATAATGTAGTTGAAGATT+GGG | - | chr7_3:80984742-80984761 | Msa1129080:intron | 20.0% |
| !! | AAAAAAAAAGTTTATTGTGC+TGG | - | chr7_3:80984985-80985004 | Msa1129080:CDS | 20.0% |
| !! | AACGTAAATATGATAATTAG+AGG | + | chr7_3:80985049-80985068 | None:intergenic | 20.0% |
| !!! | TGATGATGCATTTAATTATT+AGG | - | chr7_3:80985196-80985215 | Msa1129080:CDS | 20.0% |
| !! | CATTTAATTATTAGGACATT+TGG | - | chr7_3:80985204-80985223 | Msa1129080:CDS | 20.0% |
| !! | GAATATGCAAGTTTATTTAT+CGG | - | chr7_3:80985333-80985352 | Msa1129080:intron | 20.0% |
| !!! | TTCAAATTTGCTTAAGTTTT+GGG | + | chr7_3:80985374-80985393 | None:intergenic | 20.0% |
| !! | AAAGAATTATTATCATGCTA+CGG | + | chr7_3:80985760-80985779 | None:intergenic | 20.0% |
| !! | ATAATGAAACTAAGAAGAAA+TGG | + | chr7_3:80985881-80985900 | None:intergenic | 20.0% |
| !! | ATTTCTTCTTAGTTTCATTA+TGG | - | chr7_3:80985880-80985899 | Msa1129080:intron | 20.0% |
| !! | TTTCTTCTTAGTTTCATTAT+GGG | - | chr7_3:80985881-80985900 | Msa1129080:intron | 20.0% |
| !!! | CTTTTCCATTTACATTTTTA+TGG | - | chr7_3:80985933-80985952 | Msa1129080:intron | 20.0% |
| !! | TATCACCATAAAAATGTAAA+TGG | + | chr7_3:80985941-80985960 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCATTATGAG+TGG | - | chr7_3:80986026-80986045 | Msa1129080:CDS | 20.0% |
| !! | TTATACAATTTCATATCATC+AGG | - | chr7_3:80986062-80986081 | Msa1129080:intron | 20.0% |
| !! | ACACACTTACAAAATTATAA+AGG | - | chr7_3:80986246-80986265 | Msa1129080:intron | 20.0% |
| !!! | AAATTATAAAGGTACTTTGT+TGG | - | chr7_3:80986257-80986276 | Msa1129080:intron | 20.0% |
| !! | ATACTTAAAAACAGTTAAGA+GGG | + | chr7_3:80986286-80986305 | None:intergenic | 20.0% |
| !! | CTAAAAACTACTACAAAATA+AGG | + | chr7_3:80986310-80986329 | None:intergenic | 20.0% |
| !! | AAAATGATAGATGAAAAAGA+AGG | + | chr7_3:80986339-80986358 | None:intergenic | 20.0% |
| !! | TTTAAATAAATGTCGATGAT+AGG | + | chr7_3:80986858-80986877 | None:intergenic | 20.0% |
| !! | ATATTTAGCAAGCATAATAT+TGG | + | chr7_3:80987401-80987420 | None:intergenic | 20.0% |
| !! | CACCAATCTTTAATTAATTA+AGG | + | chr7_3:80987593-80987612 | None:intergenic | 20.0% |
| !! | TCCTATAAATTATAATGTCA+GGG | - | chr7_3:80988726-80988745 | Msa1129080:intron | 20.0% |
| !! | CTATCAATTAAATTCCTATA+AGG | + | chr7_3:80989550-80989569 | None:intergenic | 20.0% |
| !! | CTTATAGGAATTTAATTGAT+AGG | - | chr7_3:80989548-80989567 | Msa1129080:five_prime_UTR | 20.0% |
| !!! | TTTCTATCAACAAATTTTCA+GGG | + | chr7_3:80989628-80989647 | None:intergenic | 20.0% |
| !!! | ATTTCTATCAACAAATTTTC+AGG | + | chr7_3:80989629-80989648 | None:intergenic | 20.0% |
| !! | TCCTTCATTTATATATACAA+TGG | - | chr7_3:80989747-80989766 | Msa1129080:intron | 20.0% |
| !! | TCCATTGTATATATAAATGA+AGG | + | chr7_3:80989751-80989770 | None:intergenic | 20.0% |
| ! | GAAACTATGTACTAAAACAT+GGG | + | chr7_3:80983710-80983729 | None:intergenic | 25.0% |
| ! | TGAAACTATGTACTAAAACA+TGG | + | chr7_3:80983711-80983730 | None:intergenic | 25.0% |
| !!! | TCTTCTTTGAGAATGTTTTA+TGG | + | chr7_3:80983923-80983942 | None:intergenic | 25.0% |
| ! | TTAGTAGAAAGCAATAAAGA+AGG | + | chr7_3:80984033-80984052 | None:intergenic | 25.0% |
| ! | ATCAAACTTGCAAATATCTT+TGG | + | chr7_3:80984166-80984185 | None:intergenic | 25.0% |
| ! | AAAGATATTTGCAAGTTTGA+TGG | - | chr7_3:80984165-80984184 | Msa1129080:intron | 25.0% |
| ! | GAAATAATGTAGTTGAAGAT+TGG | - | chr7_3:80984741-80984760 | Msa1129080:intron | 25.0% |
| !!! | TCAAATTTGCTTAAGTTTTG+GGG | + | chr7_3:80985373-80985392 | None:intergenic | 25.0% |
| !!! | GTTCAAATTTGCTTAAGTTT+TGG | + | chr7_3:80985375-80985394 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTATGTAGGAC+TGG | - | chr7_3:80985510-80985529 | Msa1129080:intron | 25.0% |
| !!! | CAAATTTGTTCGCATTTTAT+CGG | - | chr7_3:80985717-80985736 | Msa1129080:intron | 25.0% |
| !!! | AAATTTGTTCGCATTTTATC+GGG | - | chr7_3:80985718-80985737 | Msa1129080:intron | 25.0% |
| ! | TAATTCTCTTGCAATTGTTA+TGG | - | chr7_3:80985961-80985980 | Msa1129080:CDS | 25.0% |
| ! | CATTAGTCAATATCGAAAAT+AGG | - | chr7_3:80986102-80986121 | Msa1129080:intron | 25.0% |
| ! | AGTTGTTCAATTATCTTTGT+AGG | + | chr7_3:80986134-80986153 | None:intergenic | 25.0% |
| ! | TAATATCAAAAGCTTCTTAC+TGG | + | chr7_3:80986191-80986210 | None:intergenic | 25.0% |
| ! | TTAATTTACCTCCTAAACTT+TGG | - | chr7_3:80986219-80986238 | Msa1129080:intron | 25.0% |
| ! | GATACTTAAAAACAGTTAAG+AGG | + | chr7_3:80986287-80986306 | None:intergenic | 25.0% |
| !! | TTTCATCTATCATTTTCCTT+TGG | - | chr7_3:80986343-80986362 | Msa1129080:intron | 25.0% |
| !!! | TTGAGACATTACTTTTAAGT+TGG | - | chr7_3:80986651-80986670 | Msa1129080:intron | 25.0% |
| !!! | TTAAGTTGGTTTTCTCAAAT+TGG | - | chr7_3:80986665-80986684 | Msa1129080:intron | 25.0% |
| !!! | TAAGTTGGTTTTCTCAAATT+GGG | - | chr7_3:80986666-80986685 | Msa1129080:intron | 25.0% |
| ! | TCGAAATCACAAATGATATT+AGG | + | chr7_3:80986892-80986911 | None:intergenic | 25.0% |
| !! | ACAATCTTTTCAATTTCTGT+TGG | - | chr7_3:80986972-80986991 | Msa1129080:intron | 25.0% |
| ! | TAAAACCGTGTAATAAGAAA+AGG | + | chr7_3:80987140-80987159 | None:intergenic | 25.0% |
| ! | CAAGAAAAATCAATGTTAAC+TGG | + | chr7_3:80987494-80987513 | None:intergenic | 25.0% |
| ! | AAGGTTCAATGATACAAAAT+CGG | + | chr7_3:80987629-80987648 | None:intergenic | 25.0% |
| ! | TCTGAAGAACTATATATAGA+AGG | + | chr7_3:80987648-80987667 | None:intergenic | 25.0% |
| !! | TGAGTTTTCTATGATTGATT+GGG | - | chr7_3:80988292-80988311 | Msa1129080:intron | 25.0% |
| !!! | GTAATCGTATTTTTTATCCA+CGG | - | chr7_3:80988447-80988466 | Msa1129080:intron | 25.0% |
| ! | CAAAAAATAGTACATAGAGA+AGG | + | chr7_3:80988629-80988648 | None:intergenic | 25.0% |
| ! | CTCCTATAAATTATAATGTC+AGG | - | chr7_3:80988725-80988744 | Msa1129080:intron | 25.0% |
| ! | ACCCTGACATTATAATTTAT+AGG | + | chr7_3:80988730-80988749 | None:intergenic | 25.0% |
| !! | GTGAAGAATACAAATTGTTT+TGG | - | chr7_3:80988748-80988767 | Msa1129080:intron | 25.0% |
| ! | GAACATTTGGTATATCTAAT+TGG | - | chr7_3:80989111-80989130 | Msa1129080:CDS | 25.0% |
| !!! | GTCGATTTTACTATCTATTT+GGG | - | chr7_3:80989395-80989414 | Msa1129080:CDS | 25.0% |
| ! | AATTGATAGGAAAATGTATC+AGG | - | chr7_3:80989561-80989580 | Msa1129080:five_prime_UTR | 25.0% |
| !! | ATCATTTTCAGAAGGATATA+AGG | + | chr7_3:80989587-80989606 | None:intergenic | 25.0% |
| !!! | ATTTTCAGGGTTTAAATGTT+GGG | + | chr7_3:80989615-80989634 | None:intergenic | 25.0% |
| !!! | AATTTTCAGGGTTTAAATGT+TGG | + | chr7_3:80989616-80989635 | None:intergenic | 25.0% |
| !! | TAATGAATGGGTTGATATGA+AGG | - | chr7_3:80983566-80983585 | Msa1129080:three_prime_UTR | 30.0% |
| ATGAAGGCAACAAATAGAAA+AGG | + | chr7_3:80983672-80983691 | None:intergenic | 30.0% | |
| !! | AGAATGTTTTATGGTGGAAA+TGG | + | chr7_3:80983914-80983933 | None:intergenic | 30.0% |
| !! | TCTTTGAGAATGTTTTATGG+TGG | + | chr7_3:80983920-80983939 | None:intergenic | 30.0% |
| AGTAAGAATGAAGAACAAGT+TGG | - | chr7_3:80984078-80984097 | Msa1129080:CDS | 30.0% | |
| GTAAGAATGAAGAACAAGTT+GGG | - | chr7_3:80984079-80984098 | Msa1129080:CDS | 30.0% | |
| TGTTTGCGTTTAATTATTGC+AGG | - | chr7_3:80984842-80984861 | Msa1129080:intron | 30.0% | |
| GTTTGCGTTTAATTATTGCA+GGG | - | chr7_3:80984843-80984862 | Msa1129080:intron | 30.0% | |
| ! | ATATTTACGTTTTGCACAAC+AGG | - | chr7_3:80985058-80985077 | Msa1129080:CDS | 30.0% |
| AAAAAGCAAAGACCTTCAAA+TGG | + | chr7_3:80985129-80985148 | None:intergenic | 30.0% | |
| GTTTATATTGTGTCGAAAGT+AGG | - | chr7_3:80985301-80985320 | Msa1129080:intron | 30.0% | |
| !!! | AAATTTGCTTAAGTTTTGGG+GGG | + | chr7_3:80985371-80985390 | None:intergenic | 30.0% |
| !! | CAAATTTGCTTAAGTTTTGG+GGG | + | chr7_3:80985372-80985391 | None:intergenic | 30.0% |
| TTAGTAGCACACAATAATCA+TGG | + | chr7_3:80985449-80985468 | None:intergenic | 30.0% | |
| !!! | GTACTTATTTTAGTCAATCC+TGG | - | chr7_3:80985664-80985683 | Msa1129080:intron | 30.0% |
| TAAGCAAGACATGAAATAAG+AGG | + | chr7_3:80985994-80986013 | None:intergenic | 30.0% | |
| GTTCAATTATCTTTGTAGGA+GGG | + | chr7_3:80986130-80986149 | None:intergenic | 30.0% | |
| TGTTCAATTATCTTTGTAGG+AGG | + | chr7_3:80986131-80986150 | None:intergenic | 30.0% | |
| TGAACTTGTAAGAATTTGTC+TGG | + | chr7_3:80986377-80986396 | None:intergenic | 30.0% | |
| TTGCAAAATCCGTATCTTTA+AGG | - | chr7_3:80986781-80986800 | Msa1129080:CDS | 30.0% | |
| ! | TTTTCAATTTCTGTTGGAAC+AGG | - | chr7_3:80986978-80986997 | Msa1129080:intron | 30.0% |
| TTTGAGGAGTAAACACTAAA+GGG | + | chr7_3:80987011-80987030 | None:intergenic | 30.0% | |
| AGATTACATAGGCTGTAAAT+CGG | + | chr7_3:80987176-80987195 | None:intergenic | 30.0% | |
| GTTATCACAGAAGATTACAT+AGG | + | chr7_3:80987187-80987206 | None:intergenic | 30.0% | |
| TATCTGAATTCTGTCATACT+GGG | + | chr7_3:80987344-80987363 | None:intergenic | 30.0% | |
| ATATCTGAATTCTGTCATAC+TGG | + | chr7_3:80987345-80987364 | None:intergenic | 30.0% | |
| AAAATCAATGTTAACTGGAG+AGG | + | chr7_3:80987489-80987508 | None:intergenic | 30.0% | |
| GGAAAAGTAAAACAGAACAA+TGG | + | chr7_3:80987572-80987591 | None:intergenic | 30.0% | |
| TCAATGATACAAAATCGGAT+AGG | + | chr7_3:80987624-80987643 | None:intergenic | 30.0% | |
| AGATTATTTCGTTCTGTTAC+CGG | - | chr7_3:80988056-80988075 | Msa1129080:intron | 30.0% | |
| AGATGAATTTCTAAGTCAGA+AGG | - | chr7_3:80988205-80988224 | Msa1129080:CDS | 30.0% | |
| GATGAATTTCTAAGTCAGAA+GGG | - | chr7_3:80988206-80988225 | Msa1129080:CDS | 30.0% | |
| ! | AATTTTCCTGTAAACAGATC+AGG | + | chr7_3:80988257-80988276 | None:intergenic | 30.0% |
| TGATCTGTTTACAGGAAAAT+TGG | - | chr7_3:80988256-80988275 | Msa1129080:intron | 30.0% | |
| ! | CTGAGTTTTCTATGATTGAT+TGG | - | chr7_3:80988291-80988310 | Msa1129080:intron | 30.0% |
| AAAGATGATGCACCTTAAAA+TGG | + | chr7_3:80988421-80988440 | None:intergenic | 30.0% | |
| GTAAGGATATAAAATAACCG+TGG | + | chr7_3:80988467-80988486 | None:intergenic | 30.0% | |
| CTCTATACTTTATAGAGTGT+TGG | - | chr7_3:80988530-80988549 | Msa1129080:intron | 30.0% | |
| ! | CATGAACTGTTATTTGATGA+TGG | - | chr7_3:80988689-80988708 | Msa1129080:intron | 30.0% |
| TCAACATATGCATCTATGAT+CGG | + | chr7_3:80988975-80988994 | None:intergenic | 30.0% | |
| ! | GATGCATATGTTGAATGTTT+TGG | - | chr7_3:80988981-80989000 | Msa1129080:intron | 30.0% |
| !! | AAAATAATCAAGCCTTGTTG+TGG | - | chr7_3:80989080-80989099 | Msa1129080:CDS | 30.0% |
| AATAGATAGTAAAATCGACC+CGG | + | chr7_3:80989394-80989413 | None:intergenic | 30.0% | |
| !! | GGTCGATTTTACTATCTATT+TGG | - | chr7_3:80989394-80989413 | Msa1129080:CDS | 30.0% |
| TAGATTACTTGATCAAGAAG+AGG | - | chr7_3:80989515-80989534 | Msa1129080:five_prime_UTR | 30.0% | |
| AGATTACTTGATCAAGAAGA+GGG | - | chr7_3:80989516-80989535 | Msa1129080:five_prime_UTR | 30.0% | |
| !! | TTTTCAGGGTTTAAATGTTG+GGG | + | chr7_3:80989614-80989633 | None:intergenic | 30.0% |
| TGGAAGCTGATTAATATATG+TGG | - | chr7_3:80989686-80989705 | Msa1129080:five_prime_UTR | 30.0% | |
| GGAAGCTGATTAATATATGT+GGG | - | chr7_3:80989687-80989706 | Msa1129080:five_prime_UTR | 30.0% | |
| CAAATAGAAAAGGAAAAGCG+TGG | + | chr7_3:80983662-80983681 | None:intergenic | 35.0% | |
| ATGTACTAAAACATGGGATG+AGG | + | chr7_3:80983704-80983723 | None:intergenic | 35.0% | |
| ATTCATGGCTTCAGCAATAA+TGG | - | chr7_3:80983873-80983892 | Msa1129080:CDS | 35.0% | |
| TTCATGGCTTCAGCAATAAT+GGG | - | chr7_3:80983874-80983893 | Msa1129080:CDS | 35.0% | |
| TCTGAATCTGATCCATTGAA+CGG | - | chr7_3:80984000-80984019 | Msa1129080:intron | 35.0% | |
| GATATTTGCAAGTTTGATGG+TGG | - | chr7_3:80984168-80984187 | Msa1129080:intron | 35.0% | |
| ! | AAGGAGAAGCACATTCAATT+GGG | + | chr7_3:80984212-80984231 | None:intergenic | 35.0% |
| ! | AAAGGAGAAGCACATTCAAT+TGG | + | chr7_3:80984213-80984232 | None:intergenic | 35.0% |
| CTTACCAGGTAGAAACATAA+GGG | + | chr7_3:80984250-80984269 | None:intergenic | 35.0% | |
| ACTTACCAGGTAGAAACATA+AGG | + | chr7_3:80984251-80984270 | None:intergenic | 35.0% | |
| TCAACAAGCTCTTATATCGA+GGG | + | chr7_3:80984496-80984515 | None:intergenic | 35.0% | |
| TTAATTATTGCAGGGATGGA+TGG | - | chr7_3:80984851-80984870 | Msa1129080:intron | 35.0% | |
| ! | GAGATAAATTGGCTTCTTTG+GGG | + | chr7_3:80985578-80985597 | None:intergenic | 35.0% |
| ! | CGAGATAAATTGGCTTCTTT+GGG | + | chr7_3:80985579-80985598 | None:intergenic | 35.0% |
| ! | ACGAGATAAATTGGCTTCTT+TGG | + | chr7_3:80985580-80985599 | None:intergenic | 35.0% |
| AAGAAGCCAATTTATCTCGT+CGG | - | chr7_3:80985580-80985599 | Msa1129080:intron | 35.0% | |
| ATAAGTACTAGATCAACCGT+TGG | + | chr7_3:80985652-80985671 | None:intergenic | 35.0% | |
| TGCGAACAAATTTGACAGAA+AGG | + | chr7_3:80985711-80985730 | None:intergenic | 35.0% | |
| ACAGTTACATGTAGTTCTTC+AGG | + | chr7_3:80985857-80985876 | None:intergenic | 35.0% | |
| TTGACTAATGCCATCTTCAA+TGG | + | chr7_3:80986092-80986111 | None:intergenic | 35.0% | |
| AGTGTGTGTTACCAAAGTTT+AGG | + | chr7_3:80986233-80986252 | None:intergenic | 35.0% | |
| TTGTCTGGAAAATAGACCAA+AGG | + | chr7_3:80986362-80986381 | None:intergenic | 35.0% | |
| TTACTCTCTGATCTATTGTC+AGG | - | chr7_3:80986432-80986451 | Msa1129080:intron | 35.0% | |
| TGACAAAGTTTCCTTTCTAG+TGG | - | chr7_3:80986698-80986717 | Msa1129080:intron | 35.0% | |
| TGTTATCATTGCCACTAGAA+AGG | + | chr7_3:80986712-80986731 | None:intergenic | 35.0% | |
| CTTTGAGCTTCATTTACACT+GGG | + | chr7_3:80986740-80986759 | None:intergenic | 35.0% | |
| TCTTTGAGCTTCATTTACAC+TGG | + | chr7_3:80986741-80986760 | None:intergenic | 35.0% | |
| AAATGAAGCTCAAAGACTTG+CGG | - | chr7_3:80986745-80986764 | Msa1129080:CDS | 35.0% | |
| ! | ATCCGTATCTTTAAGGACAA+TGG | - | chr7_3:80986788-80986807 | Msa1129080:CDS | 35.0% |
| ! | TCCGTATCTTTAAGGACAAT+GGG | - | chr7_3:80986789-80986808 | Msa1129080:CDS | 35.0% |
| CTGATCAATCAAAACACTGT+TGG | + | chr7_3:80986934-80986953 | None:intergenic | 35.0% | |
| ! | TTGATCAGTCTCCTTTAAAG+TGG | - | chr7_3:80986946-80986965 | Msa1129080:intron | 35.0% |
| ! | AAGATTGTTCGCCACTTTAA+AGG | + | chr7_3:80986960-80986979 | None:intergenic | 35.0% |
| TTGAGGAGTAAACACTAAAG+GGG | + | chr7_3:80987010-80987029 | None:intergenic | 35.0% | |
| GTTTGAGGAGTAAACACTAA+AGG | + | chr7_3:80987012-80987031 | None:intergenic | 35.0% | |
| TCCTCAAACATGATTGTCTT+CGG | - | chr7_3:80987023-80987042 | Msa1129080:intron | 35.0% | |
| CACTGTTTAACATTGCAGTA+TGG | - | chr7_3:80987100-80987119 | Msa1129080:intron | 35.0% | |
| !!! | GCTAGCCTTTTCTTATTACA+CGG | - | chr7_3:80987132-80987151 | Msa1129080:CDS | 35.0% |
| TTGATTAATTGTGCTCTGCA+TGG | - | chr7_3:80987220-80987239 | Msa1129080:intron | 35.0% | |
| TGGTCTTCTAACAATCATCA+AGG | - | chr7_3:80987262-80987281 | Msa1129080:intron | 35.0% | |
| GGTCTTCTAACAATCATCAA+GGG | - | chr7_3:80987263-80987282 | Msa1129080:intron | 35.0% | |
| ATCTGAATTCTGTCATACTG+GGG | + | chr7_3:80987343-80987362 | None:intergenic | 35.0% | |
| GACAGAATTCAGATATGCAA+TGG | - | chr7_3:80987349-80987368 | Msa1129080:intron | 35.0% | |
| !! | TTGCAAACTGCCTTTTGTTT+TGG | - | chr7_3:80987737-80987756 | Msa1129080:CDS | 35.0% |
| !!! | GCCTTTTGTTTTGGAAAAGA+CGG | - | chr7_3:80987746-80987765 | Msa1129080:CDS | 35.0% |
| ! | TCCGTCTTTTCCAAAACAAA+AGG | + | chr7_3:80987750-80987769 | None:intergenic | 35.0% |
| GAACTGATTGAGTGATATAG+AGG | - | chr7_3:80987897-80987916 | Msa1129080:intron | 35.0% | |
| ! | AGGCTCTAATGATACAAAAC+CGG | - | chr7_3:80987917-80987936 | Msa1129080:intron | 35.0% |
| TCTAATGATACAAAACCGGA+AGG | - | chr7_3:80987921-80987940 | Msa1129080:intron | 35.0% | |
| ACTGGTATGTAACTAACGAA+TGG | - | chr7_3:80987946-80987965 | Msa1129080:intron | 35.0% | |
| GTATGTAACTAACGAATGGA+AGG | - | chr7_3:80987950-80987969 | Msa1129080:intron | 35.0% | |
| ATCTGTGATGTTCTCTACAT+TGG | - | chr7_3:80988079-80988098 | Msa1129080:intron | 35.0% | |
| GAGGATGGAAAGATAGTAAA+AGG | - | chr7_3:80988101-80988120 | Msa1129080:intron | 35.0% | |
| AAGATAGTAAAAGGTCTGTC+TGG | - | chr7_3:80988110-80988129 | Msa1129080:intron | 35.0% | |
| TTCTATGATTGATTGGGTGA+AGG | - | chr7_3:80988298-80988317 | Msa1129080:intron | 35.0% | |
| !! | ATTGATTGGGTGAAGGTATT+CGG | - | chr7_3:80988305-80988324 | Msa1129080:intron | 35.0% |
| ! | AAAAGATTGCTTGCTGAAAC+AGG | + | chr7_3:80988338-80988357 | None:intergenic | 35.0% |
| !!! | TAGAGTGTTGGTTAGTTTTG+TGG | - | chr7_3:80988542-80988561 | Msa1129080:intron | 35.0% |
| GATCTCTAAGTTTGACATGT+AGG | + | chr7_3:80988667-80988686 | None:intergenic | 35.0% | |
| TCATCCAGAATTTGTGAGAA+TGG | - | chr7_3:80988776-80988795 | Msa1129080:intron | 35.0% | |
| TCCATGCCTTTCATTCTTAT+AGG | + | chr7_3:80989424-80989443 | None:intergenic | 35.0% | |
| ACTTAATCTGCAGGTACAAT+TGG | + | chr7_3:80989477-80989496 | None:intergenic | 35.0% | |
| AGCTGATTAATATATGTGGG+TGG | - | chr7_3:80989690-80989709 | Msa1129080:five_prime_UTR | 35.0% | |
| !! | GAATGGGTTGATATGAAGGA+AGG | - | chr7_3:80983570-80983589 | Msa1129080:three_prime_UTR | 40.0% |
| TTTCACTTGCCGTTCATTCA+TGG | - | chr7_3:80983858-80983877 | Msa1129080:CDS | 40.0% | |
| TTGCTGAAGCCATGAATGAA+CGG | + | chr7_3:80983870-80983889 | None:intergenic | 40.0% | |
| !!! | GCTTCAGCAATAATGGGTTT+TGG | - | chr7_3:80983880-80983899 | Msa1129080:CDS | 40.0% |
| ATCTGATCCATTGAACGGTA+AGG | - | chr7_3:80984005-80984024 | Msa1129080:intron | 40.0% | |
| ! | GAGCAAAGTTGTTACTTACC+AGG | + | chr7_3:80984264-80984283 | None:intergenic | 40.0% |
| TATATCGAGGGACGAAGTAA+CGG | + | chr7_3:80984484-80984503 | None:intergenic | 40.0% | |
| GTCAACAAGCTCTTATATCG+AGG | + | chr7_3:80984497-80984516 | None:intergenic | 40.0% | |
| GTTGAAGATTGGGAAGATGT+AGG | - | chr7_3:80984752-80984771 | Msa1129080:intron | 40.0% | |
| GCGTTTAATTATTGCAGGGA+TGG | - | chr7_3:80984847-80984866 | Msa1129080:intron | 40.0% | |
| ACAACACAACACAGCATACT+TGG | + | chr7_3:80984915-80984934 | None:intergenic | 40.0% | |
| AATGGTGTTCGATCATGAAC+AGG | + | chr7_3:80985111-80985130 | None:intergenic | 40.0% | |
| CATGATCGAACACCATTTGA+AGG | - | chr7_3:80985114-80985133 | Msa1129080:CDS | 40.0% | |
| !! | ACTGGTGAAACTTGTTGAAG+AGG | - | chr7_3:80985528-80985547 | Msa1129080:intron | 40.0% |
| GCAACCATTGTTACCTATCT+TGG | - | chr7_3:80985823-80985842 | Msa1129080:intron | 40.0% | |
| ACCATTGTTACCTATCTTGG+AGG | - | chr7_3:80985826-80985845 | Msa1129080:intron | 40.0% | |
| ATCAGGTGATCCATTGAAGA+TGG | - | chr7_3:80986079-80986098 | Msa1129080:intron | 40.0% | |
| AAGCTTCTTACTGGAAGACA+TGG | + | chr7_3:80986182-80986201 | None:intergenic | 40.0% | |
| GTGTGTTACCAAAGTTTAGG+AGG | + | chr7_3:80986230-80986249 | None:intergenic | 40.0% | |
| GCTGGCTAATATCATACCAA+AGG | - | chr7_3:80986456-80986475 | Msa1129080:intron | 40.0% | |
| TACCAAAGGACACTCTTCTT+TGG | - | chr7_3:80986470-80986489 | Msa1129080:intron | 40.0% | |
| !! | TTCCAAAGAAGAGTGTCCTT+TGG | + | chr7_3:80986475-80986494 | None:intergenic | 40.0% |
| AATGAAGCTCAAAGACTTGC+GGG | - | chr7_3:80986746-80986765 | Msa1129080:CDS | 40.0% | |
| GCCCATTGTCCTTAAAGATA+CGG | + | chr7_3:80986793-80986812 | None:intergenic | 40.0% | |
| CGTTGCACATACCAAAAGAA+GGG | + | chr7_3:80986819-80986838 | None:intergenic | 40.0% | |
| ! | CCTTCTTTTGGTATGTGCAA+CGG | - | chr7_3:80986817-80986836 | Msa1129080:CDS | 40.0% |
| ACCGAAGACAATCATGTTTG+AGG | + | chr7_3:80987027-80987046 | None:intergenic | 40.0% | |
| CAAACATGATTGTCTTCGGT+AGG | - | chr7_3:80987027-80987046 | Msa1129080:intron | 40.0% | |
| ! | GATTGTCTTCGGTAGGATTT+TGG | - | chr7_3:80987034-80987053 | Msa1129080:intron | 40.0% |
| CATTGCAGTATGGTATGAAC+TGG | - | chr7_3:80987110-80987129 | Msa1129080:intron | 40.0% | |
| ! | AAGGAGGCATGATTTAGTCA+TGG | - | chr7_3:80987307-80987326 | Msa1129080:intron | 40.0% |
| TCTGAATTCTGTCATACTGG+GGG | + | chr7_3:80987342-80987361 | None:intergenic | 40.0% | |
| TATGCAATGGATCGACTAGT+TGG | - | chr7_3:80987362-80987381 | Msa1129080:intron | 40.0% | |
| ! | ATGCAATGGATCGACTAGTT+GGG | - | chr7_3:80987363-80987382 | Msa1129080:intron | 40.0% |
| GATGACCATCGTGATGTATT+CGG | - | chr7_3:80987795-80987814 | Msa1129080:intron | 40.0% | |
| ATGACCATCGTGATGTATTC+GGG | - | chr7_3:80987796-80987815 | Msa1129080:intron | 40.0% | |
| GTATTCGGGATCAATGTTGT+CGG | - | chr7_3:80987810-80987829 | Msa1129080:intron | 40.0% | |
| TATTCGGGATCAATGTTGTC+GGG | - | chr7_3:80987811-80987830 | Msa1129080:intron | 40.0% | |
| TGTAGAGAACATCACAGATC+CGG | + | chr7_3:80988078-80988097 | None:intergenic | 40.0% | |
| TGTGATGTTCTCTACATTGG+AGG | - | chr7_3:80988082-80988101 | Msa1129080:intron | 40.0% | |
| ATGTTCTCTACATTGGAGGA+TGG | - | chr7_3:80988086-80988105 | Msa1129080:intron | 40.0% | |
| AATAAGACAGGACCTTCATC+TGG | + | chr7_3:80988140-80988159 | None:intergenic | 40.0% | |
| TGATAACCGACGAATAAGAC+AGG | + | chr7_3:80988152-80988171 | None:intergenic | 40.0% | |
| GTCGGTTATCACATGTTGAT+GGG | - | chr7_3:80988161-80988180 | Msa1129080:intron | 40.0% | |
| TCCTGTAAACAGATCAGGAT+GGG | + | chr7_3:80988252-80988271 | None:intergenic | 40.0% | |
| TTCCTGTAAACAGATCAGGA+TGG | + | chr7_3:80988253-80988272 | None:intergenic | 40.0% | |
| CTCACAAATTCTGGATGATC+AGG | + | chr7_3:80988774-80988793 | None:intergenic | 40.0% | |
| TGTGGAGAGGAATGAACATT+TGG | - | chr7_3:80989098-80989117 | Msa1129080:CDS | 40.0% | |
| AGTCTCGATTAACATCTCTG+AGG | + | chr7_3:80989210-80989229 | None:intergenic | 40.0% | |
| CAGAGATGTTAATCGAGACT+CGG | - | chr7_3:80989210-80989229 | Msa1129080:CDS | 40.0% | |
| ! | ATCGAGACTCGGTTAAGATT+AGG | - | chr7_3:80989221-80989240 | Msa1129080:CDS | 40.0% |
| ! | CCACTGGAAATGACAGATTT+TGG | + | chr7_3:80989357-80989376 | None:intergenic | 40.0% |
| ! | CCAAAATCTGTCATTTCCAG+TGG | - | chr7_3:80989354-80989373 | Msa1129080:CDS | 40.0% |
| ! | AGTGGTTCTACCAAAAATGC+CGG | - | chr7_3:80989372-80989391 | Msa1129080:CDS | 40.0% |
| ! | TAAAATCGACCCGGCATTTT+TGG | + | chr7_3:80989385-80989404 | None:intergenic | 40.0% |
| GGGAAGCCTATAAGAATGAA+AGG | - | chr7_3:80989415-80989434 | Msa1129080:CDS | 40.0% | |
| GCCTATAAGAATGAAAGGCA+TGG | - | chr7_3:80989420-80989439 | Msa1129080:CDS | 40.0% | |
| CAACTTCAGACTTAATCTGC+AGG | + | chr7_3:80989486-80989505 | None:intergenic | 40.0% | |
| TTACTTGATCAAGAAGAGGG+AGG | - | chr7_3:80989519-80989538 | Msa1129080:five_prime_UTR | 40.0% | |
| ! | GGGGTTTGATCATTTTCAGA+AGG | + | chr7_3:80989595-80989614 | None:intergenic | 40.0% |
| !! | TGGGTTGATATGAAGGAAGG+AGG | - | chr7_3:80983573-80983592 | Msa1129080:three_prime_UTR | 45.0% |
| GATGAGGAGAGCGAAAATGA+AGG | + | chr7_3:80983688-80983707 | None:intergenic | 45.0% | |
| GAAGGAACCTTACCGTTCAA+TGG | + | chr7_3:80984015-80984034 | None:intergenic | 45.0% | |
| !! | AAGTTGGGTTGACACCACTT+TGG | - | chr7_3:80984094-80984113 | Msa1129080:CDS | 45.0% |
| !! | AGTTGGGTTGACACCACTTT+GGG | - | chr7_3:80984095-80984114 | Msa1129080:CDS | 45.0% |
| !! | TTGACACCACTTTGGGATGA+TGG | - | chr7_3:80984102-80984121 | Msa1129080:CDS | 45.0% |
| !! | TGACACCACTTTGGGATGAT+GGG | - | chr7_3:80984103-80984122 | Msa1129080:CDS | 45.0% |
| !! | CACTTTGGGATGATGGGTAT+GGG | - | chr7_3:80984109-80984128 | Msa1129080:CDS | 45.0% |
| TCAATTGGGCAAAACCAACG+TGG | + | chr7_3:80984198-80984217 | None:intergenic | 45.0% | |
| ACATAAGGGTGGGAGAATCT+TGG | + | chr7_3:80984236-80984255 | None:intergenic | 45.0% | |
| CCAGGTAGAAACATAAGGGT+GGG | + | chr7_3:80984246-80984265 | None:intergenic | 45.0% | |
| ACCAGGTAGAAACATAAGGG+TGG | + | chr7_3:80984247-80984266 | None:intergenic | 45.0% | |
| GATTGGGAAGATGTAGGAGA+AGG | - | chr7_3:80984758-80984777 | Msa1129080:intron | 45.0% | |
| CATACTTGGCAAGAGCTTGA+TGG | + | chr7_3:80984901-80984920 | None:intergenic | 45.0% | |
| GAATCGCCGACGAGATAAAT+TGG | + | chr7_3:80985589-80985608 | None:intergenic | 45.0% | |
| ATCAACCGTTGGATTACGAG+CGG | + | chr7_3:80985641-80985660 | None:intergenic | 45.0% | |
| ACAACACTGATAGACTCACC+AGG | + | chr7_3:80985685-80985704 | None:intergenic | 45.0% | |
| AGGATGTAGCTGTGGTTGAA+AGG | + | chr7_3:80985787-80985806 | None:intergenic | 45.0% | |
| TCAACCACAGCTACATCCTT+CGG | - | chr7_3:80985788-80985807 | Msa1129080:intron | 45.0% | |
| TTGCAACTGAGATCTACCGA+AGG | + | chr7_3:80985807-80985826 | None:intergenic | 45.0% | |
| GCCTCCAAGATAGGTAACAA+TGG | + | chr7_3:80985830-80985849 | None:intergenic | 45.0% | |
| GACATGGCAGCAATGAAGTA+AGG | + | chr7_3:80986166-80986185 | None:intergenic | 45.0% | |
| TCTGATCTATTGTCAGGAGC+TGG | - | chr7_3:80986438-80986457 | Msa1129080:intron | 45.0% | |
| ! | CTGAAGTACTTGTGCTTGCT+AGG | - | chr7_3:80986554-80986573 | Msa1129080:CDS | 45.0% |
| CCGTTGCACATACCAAAAGA+AGG | + | chr7_3:80986820-80986839 | None:intergenic | 45.0% | |
| GTAGTGCAGGAAGATTGCAT+TGG | - | chr7_3:80987242-80987261 | Msa1129080:intron | 45.0% | |
| AATCATGCCTCCTTGTACGA+CGG | + | chr7_3:80987301-80987320 | None:intergenic | 45.0% | |
| CTGAATTCTGTCATACTGGG+GGG | + | chr7_3:80987341-80987360 | None:intergenic | 45.0% | |
| ATCTTTAAGCCCACTACCAG+GGG | + | chr7_3:80987778-80987797 | None:intergenic | 45.0% | |
| CATCTTTAAGCCCACTACCA+GGG | + | chr7_3:80987779-80987798 | None:intergenic | 45.0% | |
| TCATCTTTAAGCCCACTACC+AGG | + | chr7_3:80987780-80987799 | None:intergenic | 45.0% | |
| TGATCCCGAATACATCACGA+TGG | + | chr7_3:80987803-80987822 | None:intergenic | 45.0% | |
| ATACAAAACCGGAAGGCTAC+TGG | - | chr7_3:80987928-80987947 | Msa1129080:intron | 45.0% | |
| GTTACATACCAGTAGCCTTC+CGG | + | chr7_3:80987939-80987958 | None:intergenic | 45.0% | |
| ! | GAAGGTCCTGTCTTATTCGT+CGG | - | chr7_3:80988143-80988162 | Msa1129080:intron | 45.0% |
| ! | CGTCGGTTATCACATGTTGA+TGG | - | chr7_3:80988160-80988179 | Msa1129080:intron | 45.0% |
| !! | AGAAGGGTATTGCTCTTCGT+GGG | - | chr7_3:80988222-80988241 | Msa1129080:intron | 45.0% |
| TCTCACGTTCTCCTATATCC+CGG | - | chr7_3:80988377-80988396 | Msa1129080:intron | 45.0% | |
| ! | ACGTGAGGCTCTCCATTTTA+AGG | - | chr7_3:80988406-80988425 | Msa1129080:CDS | 45.0% |
| GCTGCCATTCTCACAAATTC+TGG | + | chr7_3:80988783-80988802 | None:intergenic | 45.0% | |
| !! | ATTGTGCCATTTGGAGCTGT+AGG | - | chr7_3:80988819-80988838 | Msa1129080:intron | 45.0% |
| !! | AATCAAGCCTTGTTGTGGAG+AGG | - | chr7_3:80989085-80989104 | Msa1129080:CDS | 45.0% |
| GTTCATTCCTCTCCACAACA+AGG | + | chr7_3:80989095-80989114 | None:intergenic | 45.0% | |
| ACCTTCAGAGATGAGAACAG+TGG | - | chr7_3:80989319-80989338 | Msa1129080:CDS | 45.0% | |
| TCCACTGTTCTCATCTCTGA+AGG | + | chr7_3:80989323-80989342 | None:intergenic | 45.0% | |
| !!! | GGCATTTTTGGTAGAACCAC+TGG | + | chr7_3:80989373-80989392 | None:intergenic | 45.0% |
| ! | GTGGTTCTACCAAAAATGCC+GGG | - | chr7_3:80989373-80989392 | Msa1129080:CDS | 45.0% |
| !!! | TACTATAATATTTTTAATTA+AGG | + | chr7_3:80984719-80984738 | None:intergenic | 5.0% |
| CCATACCCATCATCCCAAAG+TGG | + | chr7_3:80984111-80984130 | None:intergenic | 50.0% | |
| !! | CCACTTTGGGATGATGGGTA+TGG | - | chr7_3:80984108-80984127 | Msa1129080:CDS | 50.0% |
| TTGGGCAAAACCAACGTGGT+GGG | + | chr7_3:80984194-80984213 | None:intergenic | 50.0% | |
| ATTGGGCAAAACCAACGTGG+TGG | + | chr7_3:80984195-80984214 | None:intergenic | 50.0% | |
| AGGGTGGGAGAATCTTGGAA+AGG | + | chr7_3:80984231-80984250 | None:intergenic | 50.0% | |
| ! | CCCACCCTTATGTTTCTACC+TGG | - | chr7_3:80984243-80984262 | Msa1129080:intron | 50.0% |
| !! | GAGCTTGATGGTGCAAAGAG+AGG | + | chr7_3:80984889-80984908 | None:intergenic | 50.0% |
| TATCTCGTCGGCGATTCCTT+AGG | - | chr7_3:80985592-80985611 | Msa1129080:intron | 50.0% | |
| TCTACCGAAGGATGTAGCTG+TGG | + | chr7_3:80985795-80985814 | None:intergenic | 50.0% | |
| TCAGGCAAAGCCTCCAAGAT+AGG | + | chr7_3:80985839-80985858 | None:intergenic | 50.0% | |
| ! | CAATGGGCACACCCTTCTTT+TGG | - | chr7_3:80986805-80986824 | Msa1129080:CDS | 50.0% |
| CTTGCATGTACCGTCGTACA+AGG | - | chr7_3:80987288-80987307 | Msa1129080:intron | 50.0% | |
| ATTCTGTCATACTGGGGGGA+AGG | + | chr7_3:80987337-80987356 | None:intergenic | 50.0% | |
| GAAAAGACGGAAATCACCCC+TGG | - | chr7_3:80987759-80987778 | Msa1129080:CDS | 50.0% | |
| CTGTCTGGTGTTCCAGATGA+AGG | - | chr7_3:80988125-80988144 | Msa1129080:intron | 50.0% | |
| !! | CAGAAGGGTATTGCTCTTCG+TGG | - | chr7_3:80988221-80988240 | Msa1129080:intron | 50.0% |
| GCCCATCCTGATCTGTTTAC+AGG | - | chr7_3:80988248-80988267 | Msa1129080:intron | 50.0% | |
| !! | GATTGGGTGAAGGTATTCGG+CGG | - | chr7_3:80988308-80988327 | Msa1129080:intron | 50.0% |
| !! | ATTGGGTGAAGGTATTCGGC+GGG | - | chr7_3:80988309-80988328 | Msa1129080:intron | 50.0% |
| GTGAGAATGGCAGCACGATT+CGG | - | chr7_3:80988789-80988808 | Msa1129080:intron | 50.0% | |
| AGCTCCAAATGGCACAATCG+TGG | + | chr7_3:80988817-80988836 | None:intergenic | 50.0% | |
| TCTTCGCCTACAGCTCCAAA+TGG | + | chr7_3:80988828-80988847 | None:intergenic | 50.0% | |
| CTGAGGTAATCGCTGACAAC+TGG | + | chr7_3:80989193-80989212 | None:intergenic | 50.0% | |
| CAGAGATGAGAACAGTGGAG+AGG | - | chr7_3:80989324-80989343 | Msa1129080:CDS | 50.0% | |
| AGATGAGAACAGTGGAGAGG+TGG | - | chr7_3:80989327-80989346 | Msa1129080:CDS | 50.0% | |
| CTTGATCAAGAAGAGGGAGG+AGG | - | chr7_3:80989522-80989541 | Msa1129080:five_prime_UTR | 50.0% | |
| AGAGGGAGGAGGATCCTTAT+AGG | - | chr7_3:80989533-80989552 | Msa1129080:five_prime_UTR | 50.0% | |
| CGAGGGACGAAGTAACGGTA+CGG | + | chr7_3:80984479-80984498 | None:intergenic | 55.0% | |
| ATTGCAGGGATGGATGGCAC+TGG | - | chr7_3:80984857-80984876 | Msa1129080:intron | 55.0% | |
| ! | AGGGATGGATGGCACTGGAT+CGG | - | chr7_3:80984862-80984881 | Msa1129080:intron | 55.0% |
| ! | GAGTGCAAGGCATCCACCTA+AGG | + | chr7_3:80985611-80985630 | None:intergenic | 55.0% |
| CGTTGGATTACGAGCGGCAA+CGG | + | chr7_3:80985635-80985654 | None:intergenic | 55.0% | |
| CGTTGCCGCTCGTAATCCAA+CGG | - | chr7_3:80985633-80985652 | Msa1129080:intron | 55.0% | |
| ! | TGTGCTCTGCATGGTAGTGC+AGG | - | chr7_3:80987229-80987248 | Msa1129080:intron | 55.0% |
| GCATGTACCGTCGTACAAGG+AGG | - | chr7_3:80987291-80987310 | Msa1129080:intron | 55.0% | |
| ACGGAAATCACCCCTGGTAG+TGG | - | chr7_3:80987765-80987784 | Msa1129080:CDS | 55.0% | |
| CGGAAATCACCCCTGGTAGT+GGG | - | chr7_3:80987766-80987785 | Msa1129080:CDS | 55.0% | |
| !! | TTGGGTGAAGGTATTCGGCG+GGG | - | chr7_3:80988310-80988329 | Msa1129080:intron | 55.0% |
| CACGTTCTCCTATATCCCGG+TGG | - | chr7_3:80988380-80988399 | Msa1129080:intron | 55.0% | |
| ! | GGTGCCACGATTGTGCCATT+TGG | - | chr7_3:80988810-80988829 | Msa1129080:intron | 55.0% |
| !! | TTGATGGTGGCCCACCACGT+TGG | - | chr7_3:80984181-80984200 | Msa1129080:intron | 60.0% |
| ! | GGGATGGATGGCACTGGATC+GGG | - | chr7_3:80984863-80984882 | Msa1129080:intron | 60.0% |
| CTCGTCGGCGATTCCTTAGG+TGG | - | chr7_3:80985595-80985614 | Msa1129080:intron | 60.0% | |
| CACGTGCACCACCGGGATAT+AGG | + | chr7_3:80988391-80988410 | None:intergenic | 60.0% | |
| ATATCCCGGTGGTGCACGTG+AGG | - | chr7_3:80988391-80988410 | Msa1129080:intron | 60.0% | |
| AGAGCCTCACGTGCACCACC+GGG | + | chr7_3:80988398-80988417 | None:intergenic | 65.0% | |
| GAGAGCCTCACGTGCACCAC+CGG | + | chr7_3:80988399-80988418 | None:intergenic | 65.0% | |
| GAGCGGCAACGGCGAGTGCA+AGG | + | chr7_3:80985624-80985643 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 80983540 | 80989778 | 80983540 | ID=Msa1129080;Name=Msa1129080 |
| chr7_3 | mRNA | 80983540 | 80989778 | 80983540 | ID=Msa1129080-mRNA-1;Parent=Msa1129080;Name=Msa1129080-mRNA-1;_AED=0.14;_eAED=0.14;_QI=312|1|1|1|0.92|0.85|14|148|701 |
| chr7_3 | exon | 80983540 | 80983991 | 80983540 | ID=Msa1129080-mRNA-1:exon:23478;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80984076 | 80984161 | 80984076 | ID=Msa1129080-mRNA-1:exon:23477;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80984458 | 80984571 | 80984458 | ID=Msa1129080-mRNA-1:exon:23476;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80984891 | 80985260 | 80984891 | ID=Msa1129080-mRNA-1:exon:23475;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80985934 | 80986067 | 80985934 | ID=Msa1129080-mRNA-1:exon:23474;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80986492 | 80986600 | 80986492 | ID=Msa1129080-mRNA-1:exon:23473;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80986743 | 80986864 | 80986743 | ID=Msa1129080-mRNA-1:exon:23472;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80987128 | 80987234 | 80987128 | ID=Msa1129080-mRNA-1:exon:23471;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80987416 | 80987520 | 80987416 | ID=Msa1129080-mRNA-1:exon:23470;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80987633 | 80987791 | 80987633 | ID=Msa1129080-mRNA-1:exon:23469;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80988183 | 80988238 | 80988183 | ID=Msa1129080-mRNA-1:exon:23468;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80988403 | 80988454 | 80988403 | ID=Msa1129080-mRNA-1:exon:23467;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80989054 | 80989723 | 80989054 | ID=Msa1129080-mRNA-1:exon:23466;Parent=Msa1129080-mRNA-1 |
| chr7_3 | exon | 80989749 | 80989778 | 80989749 | ID=Msa1129080-mRNA-1:exon:23465;Parent=Msa1129080-mRNA-1 |
| chr7_3 | five_prime_UTR | 80989749 | 80989778 | 80989749 | ID=Msa1129080-mRNA-1:five_prime_utr;Parent=Msa1129080-mRNA-1 |
| chr7_3 | five_prime_UTR | 80989442 | 80989723 | 80989442 | ID=Msa1129080-mRNA-1:five_prime_utr;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80989054 | 80989441 | 80989054 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80988403 | 80988454 | 80988403 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80988183 | 80988238 | 80988183 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80987633 | 80987791 | 80987633 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80987416 | 80987520 | 80987416 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80987128 | 80987234 | 80987128 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80986743 | 80986864 | 80986743 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80986492 | 80986600 | 80986492 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80985934 | 80986067 | 80985934 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80984891 | 80985260 | 80984891 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80984458 | 80984571 | 80984458 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80984076 | 80984161 | 80984076 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | CDS | 80983688 | 80983991 | 80983688 | ID=Msa1129080-mRNA-1:cds;Parent=Msa1129080-mRNA-1 |
| chr7_3 | three_prime_UTR | 80983540 | 80983687 | 80983540 | ID=Msa1129080-mRNA-1:three_prime_utr;Parent=Msa1129080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
