Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084250 | PNY16965.1 | 70.175 | 114 | 20 | 2 | 71 | 184 | 115 | 214 | 9.19e-40 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084250 | sp|P08770|TRA1_MAIZE | 35.897 | 117 | 74 | 1 | 206 | 321 | 230 | 346 | 7.31e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084250 | A0A2K3PNV1 | 70.175 | 114 | 20 | 2 | 71 | 184 | 115 | 214 | 4.39e-40 | 153 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0376580 | Msa1084250 | 0.985070 | 1.947158e-162 | -8.615850e-47 |
| Msa0516380 | Msa1084250 | 0.910309 | 2.163264e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084250 | MtrunA17_Chr5g0395271 | 69.298 | 114 | 21 | 2 | 71 | 184 | 114 | 213 | 6.33e-42 | 148 |
| Msa1084250 | MtrunA17_Chr8g0354631 | 50.394 | 127 | 63 | 0 | 203 | 329 | 158 | 284 | 2.12e-39 | 147 |
| Msa1084250 | MtrunA17_Chr5g0402891 | 54.032 | 124 | 57 | 0 | 206 | 329 | 46 | 169 | 6.93e-37 | 139 |
| Msa1084250 | MtrunA17_Chr4g0052601 | 33.742 | 163 | 101 | 2 | 162 | 323 | 75 | 231 | 6.61e-23 | 98.6 |
| Msa1084250 | MtrunA17_Chr7g0263231 | 34.234 | 111 | 73 | 0 | 208 | 318 | 545 | 655 | 2.60e-14 | 73.9 |
| Msa1084250 | MtrunA17_Chr7g0263261 | 32.432 | 111 | 75 | 0 | 208 | 318 | 486 | 596 | 2.73e-13 | 70.9 |
| Msa1084250 | MtrunA17_Chr2g0308821 | 30.081 | 123 | 85 | 1 | 208 | 329 | 133 | 255 | 4.02e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084250 | AT1G65020.1 | 45.536 | 112 | 44 | 4 | 73 | 184 | 116 | 210 | 8.65e-18 | 83.2 |
Find 62 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGAAAGATTGTGTTTA+GGG | 0.198355 | 7_2:-84515765 | Msa1084250:CDS |
| CTTAGCACAGCTCCAATATA+TGG | 0.238263 | 7_2:-84519838 | Msa1084250:CDS |
| ATCTTGTTCTCCTTACTAAA+AGG | 0.244750 | 7_2:-84521165 | Msa1084250:intron |
| CTTCAAGAAAGATTGTGTTT+AGG | 0.294344 | 7_2:-84515766 | Msa1084250:CDS |
| TCAGAAACATACCATAGTTT+AGG | 0.300619 | 7_2:+84520484 | None:intergenic |
| TGAGACTCAACTACTCTAAA+AGG | 0.310066 | 7_2:+84515836 | None:intergenic |
| AACTAACCTATCCCATATAT+TGG | 0.313425 | 7_2:+84519826 | None:intergenic |
| TTCTCTTCTCCCTTGCTAAT+AGG | 0.341493 | 7_2:-84521375 | Msa1084250:intron |
| TTCTTGAAGGGGTATTCAAA+TGG | 0.363906 | 7_2:+84515780 | None:intergenic |
| ACATACCATAGTTTAGGATT+TGG | 0.369028 | 7_2:+84520490 | None:intergenic |
| TCCATTCAGTATCAATGAAA+TGG | 0.370949 | 7_2:+84515612 | None:intergenic |
| TACTACCAAATCCTAAACTA+TGG | 0.377578 | 7_2:-84520495 | Msa1084250:intron |
| GCACCAATTGTTCACGGGTA+AGG | 0.391578 | 7_2:+84520004 | None:intergenic |
| TACCCTTACCCGTGAACAAT+TGG | 0.395683 | 7_2:-84520007 | Msa1084250:CDS |
| TATCAATGAAATGGACAGTT+GGG | 0.396600 | 7_2:+84515621 | None:intergenic |
| TCTTGAAGGGGTATTCAAAT+GGG | 0.402321 | 7_2:+84515781 | None:intergenic |
| TCCATTTCATTGATACTGAA+TGG | 0.412760 | 7_2:-84515613 | Msa1084250:CDS |
| CTAAACACAATCTTTCTTGA+AGG | 0.421143 | 7_2:+84515767 | None:intergenic |
| TAAAGAGTGCACTTCTTAGC+TGG | 0.440342 | 7_2:-84519906 | Msa1084250:CDS |
| AAAGAGGTTGCTCTCTAGTT+GGG | 0.453648 | 7_2:-84519929 | Msa1084250:CDS |
| AAAAGAGGTTGCTCTCTAGT+TGG | 0.458121 | 7_2:-84519930 | Msa1084250:CDS |
| TCTTTGAGCTTCCATGTCAA+TGG | 0.459562 | 7_2:+84521444 | None:intergenic |
| CACCAATTGTTCACGGGTAA+GGG | 0.472652 | 7_2:+84520005 | None:intergenic |
| TGGAAGCTCAAAGAGCAAAT+AGG | 0.475178 | 7_2:-84521435 | Msa1084250:CDS |
| TGGAAAATCACCAGCAGGAA+TGG | 0.484754 | 7_2:+84520041 | None:intergenic |
| GAAGAGTCGTTGAGGGATTG+AGG | 0.486035 | 7_2:-84515518 | None:intergenic |
| AGTAAGGAGAACAAGATCAA+TGG | 0.488423 | 7_2:+84521171 | None:intergenic |
| ATTGTGTCACTCGTGTGGTT+TGG | 0.489867 | 7_2:+84515554 | None:intergenic |
| GTGAGTAAATTGACATGGAT+TGG | 0.494445 | 7_2:+84521466 | None:intergenic |
| AGCCCCTCTCTGTTCAAGAT+AGG | 0.496950 | 7_2:+84520552 | None:intergenic |
| TTAGCACAGCTCCAATATAT+GGG | 0.498327 | 7_2:-84519837 | Msa1084250:CDS |
| TAAACACAATCTTTCTTGAA+GGG | 0.504065 | 7_2:+84515768 | None:intergenic |
| AAAAGTTGAAGAGTCGTTGA+GGG | 0.509511 | 7_2:-84515525 | Msa1084250:CDS |
| CTCTAAAAGGAAGTTTAGAA+AGG | 0.509865 | 7_2:+84515849 | None:intergenic |
| TCAGTTGCACCAATTGTTCA+CGG | 0.521759 | 7_2:+84519998 | None:intergenic |
| TTACTAGTTAGAAATTCTCT+AGG | 0.524564 | 7_2:+84520523 | None:intergenic |
| CAGTTGCACCAATTGTTCAC+GGG | 0.536510 | 7_2:+84519999 | None:intergenic |
| ATTTGCAGTACCATTCCTGC+TGG | 0.540904 | 7_2:-84520051 | Msa1084250:intron |
| CAATTTACTCACCATTGACA+TGG | 0.548406 | 7_2:-84521455 | Msa1084250:CDS |
| TGCACTTCTTAGCTGGAAGA+AGG | 0.549066 | 7_2:-84519899 | Msa1084250:CDS |
| CAATTGGTGCAACTGAAGCT+AGG | 0.551121 | 7_2:-84519991 | Msa1084250:CDS |
| GTATCAATGAAATGGACAGT+TGG | 0.562063 | 7_2:+84515620 | None:intergenic |
| CATATATTGGAGCTGTGCTA+AGG | 0.567562 | 7_2:+84519839 | None:intergenic |
| CTTGAAGGGGTATTCAAATG+GGG | 0.567978 | 7_2:+84515782 | None:intergenic |
| GCAGCTGCTGCACCATTGCA+AGG | 0.568115 | 7_2:-84515908 | Msa1084250:CDS |
| AATCCTATCTTGAACAGAGA+GGG | 0.568927 | 7_2:-84520555 | Msa1084250:CDS |
| ACAGCTCCAATATATGGGAT+AGG | 0.575735 | 7_2:-84519832 | Msa1084250:intron |
| AAACACAATCTTTCTTGAAG+GGG | 0.576428 | 7_2:+84515769 | None:intergenic |
| AGAACAAGATCAATGGTTTG+TGG | 0.580661 | 7_2:+84521178 | None:intergenic |
| TCAGATGGAAAATCACCAGC+AGG | 0.586827 | 7_2:+84520036 | None:intergenic |
| CAATGGTGAGTAAATTGACA+TGG | 0.601830 | 7_2:+84521461 | None:intergenic |
| AAATGAAAGACCTATTAGCA+AGG | 0.610297 | 7_2:+84521365 | None:intergenic |
| AATGAAAGACCTATTAGCAA+GGG | 0.612530 | 7_2:+84521366 | None:intergenic |
| GACATATTGTGTCACTCGTG+TGG | 0.615371 | 7_2:+84515549 | None:intergenic |
| CTAAAAGCATCACCTTGCAA+TGG | 0.621536 | 7_2:+84515896 | None:intergenic |
| ATCAATGAAATGGACAGTTG+GGG | 0.624130 | 7_2:+84515622 | None:intergenic |
| GTAAGGGTAACAACTTCAGA+TGG | 0.625627 | 7_2:+84520021 | None:intergenic |
| ATCCTATCTTGAACAGAGAG+GGG | 0.651255 | 7_2:-84520554 | Msa1084250:CDS |
| AGTTTACTATAGAAGTCAAG+CGG | 0.674051 | 7_2:+84515657 | None:intergenic |
| AGCAAGGGAGAAGAGAACAG+TGG | 0.681694 | 7_2:+84521381 | None:intergenic |
| GAATCCTATCTTGAACAGAG+AGG | 0.702978 | 7_2:-84520556 | Msa1084250:CDS |
| GGTGAAGAAGAATCAGCATG+AGG | 0.709031 | 7_2:+84521199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTAATTTTAAGTATTAT+GGG | + | chr7_2:84517443-84517462 | None:intergenic | 10.0% |
| !!! | TTATGTAATTTTAAGTATTA+TGG | + | chr7_2:84517444-84517463 | None:intergenic | 10.0% |
| !! | TTAAACAAAGTAAATAAAAT+GGG | - | chr7_2:84518898-84518917 | Msa1084250:intron | 10.0% |
| !! | TACAAACAAAAAAATAAAAA+GGG | + | chr7_2:84520311-84520330 | None:intergenic | 10.0% |
| !!! | AATAAAAATACCTTTTAGTA+AGG | + | chr7_2:84515840-84515859 | None:intergenic | 15.0% |
| !!! | ACACATTTTACAATTTATTA+TGG | - | chr7_2:84515889-84515908 | Msa1084250:CDS | 15.0% |
| !!! | ATTCTCTTTTAAATAGTTAT+TGG | - | chr7_2:84516677-84516696 | Msa1084250:intron | 15.0% |
| !!! | CTTTTTTATTTTGTTTTTGA+TGG | + | chr7_2:84517047-84517066 | None:intergenic | 15.0% |
| !! | TCAAAAACAAAATAAAAAAG+AGG | - | chr7_2:84517047-84517066 | Msa1084250:intron | 15.0% |
| !!! | CTGGATTTTATATTAAAAAA+TGG | + | chr7_2:84517563-84517582 | None:intergenic | 15.0% |
| !! | CATTAAGTAAATATAAACTT+AGG | - | chr7_2:84517584-84517603 | Msa1084250:intron | 15.0% |
| !! | AAGAATAAAACAAAAAGTAA+GGG | - | chr7_2:84518336-84518355 | Msa1084250:intron | 15.0% |
| !! | AAGGATGTATTAAATTTATA+AGG | - | chr7_2:84518841-84518860 | Msa1084250:intron | 15.0% |
| !! | CTTAAACAAAGTAAATAAAA+TGG | - | chr7_2:84518897-84518916 | Msa1084250:intron | 15.0% |
| !! | TTAAACAAAATTACTATTTC+AGG | - | chr7_2:84519193-84519212 | Msa1084250:intron | 15.0% |
| !!! | ATTTTTTTTTATCAGAAATC+AGG | + | chr7_2:84520170-84520189 | None:intergenic | 15.0% |
| !! | GTACAAACAAAAAAATAAAA+AGG | + | chr7_2:84520312-84520331 | None:intergenic | 15.0% |
| !!! | TTACTACTATTTTCATAATT+TGG | - | chr7_2:84520666-84520685 | Msa1084250:intron | 15.0% |
| !!! | AGTAAGTTTTAATATGATTA+TGG | - | chr7_2:84521036-84521055 | Msa1084250:intron | 15.0% |
| !! | AAAAAGAAAACAGCAAAAAT+AGG | + | chr7_2:84515715-84515734 | None:intergenic | 20.0% |
| !! | CAACTAAAGGAAAAAAAAAA+TGG | + | chr7_2:84516034-84516053 | None:intergenic | 20.0% |
| !!! | CTTTTTTTACTATTCTGATT+AGG | - | chr7_2:84516218-84516237 | Msa1084250:intron | 20.0% |
| !! | AATATATATGAAACCAAATC+TGG | + | chr7_2:84516619-84516638 | None:intergenic | 20.0% |
| !!! | AGATTTGGTTTCATATATAT+TGG | - | chr7_2:84516618-84516637 | Msa1084250:intron | 20.0% |
| !! | GTTTATATTTACTTAATGAC+TGG | + | chr7_2:84517582-84517601 | None:intergenic | 20.0% |
| !! | AATGGCCTAATTAAATATAA+GGG | + | chr7_2:84517643-84517662 | None:intergenic | 20.0% |
| !! | GTTTCTTGAATTATATTGAA+TGG | + | chr7_2:84517661-84517680 | None:intergenic | 20.0% |
| !!! | CATTGTAAATTTTAAATTGC+TGG | + | chr7_2:84517836-84517855 | None:intergenic | 20.0% |
| !! | ATGTAAATTATGTAGTATTC+TGG | + | chr7_2:84517875-84517894 | None:intergenic | 20.0% |
| !! | GAATACTACATAATTTACAT+TGG | - | chr7_2:84517875-84517894 | Msa1084250:intron | 20.0% |
| !!! | TATTAATTTGAACTCAATCA+AGG | + | chr7_2:84518057-84518076 | None:intergenic | 20.0% |
| !! | TAATGATATTTATTTGAGTG+TGG | + | chr7_2:84518114-84518133 | None:intergenic | 20.0% |
| !! | TTTACTATGATGAAATATGT+TGG | + | chr7_2:84518174-84518193 | None:intergenic | 20.0% |
| !! | GAAGAATAAAACAAAAAGTA+AGG | - | chr7_2:84518335-84518354 | Msa1084250:intron | 20.0% |
| !! | AAAATGTCTTCAAACATATT+AGG | - | chr7_2:84518514-84518533 | Msa1084250:intron | 20.0% |
| !! | AAATGTCTTCAAACATATTA+GGG | - | chr7_2:84518515-84518534 | Msa1084250:intron | 20.0% |
| !!! | TTTATTACTTCGATAGTTTT+TGG | + | chr7_2:84518760-84518779 | None:intergenic | 20.0% |
| !!! | AAATAAAATGGGTTGATAAT+TGG | - | chr7_2:84518909-84518928 | Msa1084250:intron | 20.0% |
| !!! | CTTTTATAGACACAAAATTA+GGG | - | chr7_2:84519605-84519624 | Msa1084250:intron | 20.0% |
| !!! | TTTATTTTTTTGTTTGTACG+TGG | - | chr7_2:84520313-84520332 | Msa1084250:intron | 20.0% |
| !!! | TTTTCTTTTTTCATTGTTGC+AGG | - | chr7_2:84515725-84515744 | Msa1084250:CDS | 25.0% |
| ! | TTACAATTTATTATGGTGTC+TGG | - | chr7_2:84515896-84515915 | Msa1084250:CDS | 25.0% |
| ! | ATAAACATTAACCACATTGA+TGG | - | chr7_2:84516003-84516022 | Msa1084250:intron | 25.0% |
| ! | ACATACATACAAACAACTAA+AGG | + | chr7_2:84516047-84516066 | None:intergenic | 25.0% |
| ! | TGTATGTATGTTTGTAATCT+AGG | - | chr7_2:84516056-84516075 | Msa1084250:intron | 25.0% |
| ! | GTATGTATGTTTGTAATCTA+GGG | - | chr7_2:84516057-84516076 | Msa1084250:intron | 25.0% |
| ! | TATGTATGTTTGTAATCTAG+GGG | - | chr7_2:84516058-84516077 | Msa1084250:intron | 25.0% |
| !! | TAAGTGCTTGTTTGAATTTT+CGG | + | chr7_2:84516173-84516192 | None:intergenic | 25.0% |
| ! | TTACAATTGAGAGTAATGAA+TGG | - | chr7_2:84516266-84516285 | Msa1084250:intron | 25.0% |
| ! | TTACTAGTTAGAAATTCTCT+AGG | + | chr7_2:84516472-84516491 | None:intergenic | 25.0% |
| ! | TCATATATATTGGCATGTAA+TGG | - | chr7_2:84516628-84516647 | Msa1084250:intron | 25.0% |
| !!! | AATACTGTGTAATTTCTAGT+TGG | - | chr7_2:84516717-84516736 | Msa1084250:intron | 25.0% |
| ! | ATTCTTTACGTCATAAATAC+TGG | + | chr7_2:84516817-84516836 | None:intergenic | 25.0% |
| !! | TAAATTACTCAACTTTTGAC+TGG | + | chr7_2:84516861-84516880 | None:intergenic | 25.0% |
| ! | ATTCGAAAGATAAGAACAAA+TGG | + | chr7_2:84517193-84517212 | None:intergenic | 25.0% |
| ! | GATGTAGATGCTATTAATTA+GGG | - | chr7_2:84517262-84517281 | Msa1084250:intron | 25.0% |
| ! | TGGTTTCTTAAAATATCAGT+AGG | + | chr7_2:84517506-84517525 | None:intergenic | 25.0% |
| !! | CTAATTAAATATAAGGGCAT+AGG | + | chr7_2:84517637-84517656 | None:intergenic | 25.0% |
| ! | CTATGCCCTTATATTTAATT+AGG | - | chr7_2:84517635-84517654 | Msa1084250:intron | 25.0% |
| ! | GAATGGCCTAATTAAATATA+AGG | + | chr7_2:84517644-84517663 | None:intergenic | 25.0% |
| !! | AGGTTTCTTATTTATGGTTA+TGG | + | chr7_2:84517683-84517702 | None:intergenic | 25.0% |
| !! | GTCTAAAGGTTTCTTATTTA+TGG | + | chr7_2:84517689-84517708 | None:intergenic | 25.0% |
| !! | TTATATTGTCTCTTTTTGTG+CGG | + | chr7_2:84517954-84517973 | None:intergenic | 25.0% |
| !!! | ATTCTTCTTTTTTCAAGTCT+GGG | + | chr7_2:84518322-84518341 | None:intergenic | 25.0% |
| !!! | TATTCTTCTTTTTTCAAGTC+TGG | + | chr7_2:84518323-84518342 | None:intergenic | 25.0% |
| ! | TATGTTTAATGCTTATGCTA+AGG | + | chr7_2:84518413-84518432 | None:intergenic | 25.0% |
| ! | GATTAATAGGGTTATAACTT+AGG | + | chr7_2:84519078-84519097 | None:intergenic | 25.0% |
| ! | ATCTGGTTAAGAGATTAATA+GGG | + | chr7_2:84519090-84519109 | None:intergenic | 25.0% |
| ! | AATCTGGTTAAGAGATTAAT+AGG | + | chr7_2:84519091-84519110 | None:intergenic | 25.0% |
| ! | AAATTGAGAGTTATGACTTA+AGG | + | chr7_2:84519147-84519166 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTAACTCAACACT+AGG | + | chr7_2:84519184-84519203 | None:intergenic | 25.0% |
| ! | TATTTCAGGATTAAAAGCTA+GGG | - | chr7_2:84519207-84519226 | Msa1084250:intron | 25.0% |
| ! | CAATCACATAAATTGATCTT+AGG | + | chr7_2:84519250-84519269 | None:intergenic | 25.0% |
| !! | GCTTTTATAGACACAAAATT+AGG | - | chr7_2:84519604-84519623 | Msa1084250:intron | 25.0% |
| ! | AGTCAATTACTTGTAATTCA+TGG | + | chr7_2:84519903-84519922 | None:intergenic | 25.0% |
| ! | ACTCTCAAAACATTACAAAA+AGG | - | chr7_2:84519920-84519939 | Msa1084250:CDS | 25.0% |
| ! | AAACAATATCTGAACTGAAA+CGG | + | chr7_2:84520071-84520090 | None:intergenic | 25.0% |
| !!! | AGAAATCAGGTTGTTTTTTA+GGG | + | chr7_2:84520157-84520176 | None:intergenic | 25.0% |
| ! | AAACTAAAAACAAAACCCTA+AGG | + | chr7_2:84520238-84520257 | None:intergenic | 25.0% |
| ! | AATAAAGATGTCATTGTATG+TGG | + | chr7_2:84520736-84520755 | None:intergenic | 25.0% |
| !! | TTTTCTCTTATAATCAGCTA+TGG | - | chr7_2:84520826-84520845 | Msa1084250:intron | 25.0% |
| ! | TGCATATTAAAACTCATTGT+TGG | + | chr7_2:84520930-84520949 | None:intergenic | 25.0% |
| ! | TAAACACAATCTTTCTTGAA+GGG | + | chr7_2:84521227-84521246 | None:intergenic | 25.0% |
| ! | TTCAAGAAAGATTGTGTTTA+GGG | - | chr7_2:84521227-84521246 | Msa1084250:CDS | 25.0% |
| ! | CTGAATGGAAATATCAAAAA+AGG | - | chr7_2:84521394-84521413 | Msa1084250:CDS | 25.0% |
| AATGAAAGACCTATTAGCAA+GGG | + | chr7_2:84515629-84515648 | None:intergenic | 30.0% | |
| AAATGAAAGACCTATTAGCA+AGG | + | chr7_2:84515630-84515649 | None:intergenic | 30.0% | |
| TGATGAAGCTGAAAATTGAT+GGG | + | chr7_2:84515691-84515710 | None:intergenic | 30.0% | |
| ATGATGAAGCTGAAAATTGA+TGG | + | chr7_2:84515692-84515711 | None:intergenic | 30.0% | |
| ATCTTGTTCTCCTTACTAAA+AGG | - | chr7_2:84515827-84515846 | Msa1084250:CDS | 30.0% | |
| TACAAATGTGGTTGAGATTA+AGG | - | chr7_2:84515948-84515967 | Msa1084250:intron | 30.0% | |
| ATGTATGTTTGTAATCTAGG+GGG | - | chr7_2:84516059-84516078 | Msa1084250:intron | 30.0% | |
| ! | ATTTTGCAAAAGCTGCATTT+TGG | + | chr7_2:84516112-84516131 | None:intergenic | 30.0% |
| ! | CTTTTGCAAAATCATGGTAA+AGG | - | chr7_2:84516120-84516139 | Msa1084250:intron | 30.0% |
| GAAAATTCAAACAAGCACTT+AGG | - | chr7_2:84516172-84516191 | Msa1084250:intron | 30.0% | |
| CAATTGTAACTGAGCTTAAT+TGG | + | chr7_2:84516255-84516274 | None:intergenic | 30.0% | |
| ! | CATTTTCTGAACTTGTATAG+AGG | - | chr7_2:84516381-84516400 | Msa1084250:intron | 30.0% |
| TACTACCAAATCCTAAACTA+TGG | - | chr7_2:84516497-84516516 | Msa1084250:intron | 30.0% | |
| ! | ACATACCATAGTTTAGGATT+TGG | + | chr7_2:84516505-84516524 | None:intergenic | 30.0% |
| TCAGAAACATACCATAGTTT+AGG | + | chr7_2:84516511-84516530 | None:intergenic | 30.0% | |
| ACTTCAAAATTTGCCAGATT+TGG | - | chr7_2:84516603-84516622 | Msa1084250:intron | 30.0% | |
| !! | TCATAAATACTGGTTTGCAA+GGG | + | chr7_2:84516807-84516826 | None:intergenic | 30.0% |
| AACTAACCTATCCCATATAT+TGG | + | chr7_2:84517169-84517188 | None:intergenic | 30.0% | |
| GGATGTAGATGCTATTAATT+AGG | - | chr7_2:84517261-84517280 | Msa1084250:intron | 30.0% | |
| ATTCTGGATGACTGTAATTA+TGG | + | chr7_2:84517859-84517878 | None:intergenic | 30.0% | |
| ACTACATAATTTACATTGGC+AGG | - | chr7_2:84517879-84517898 | Msa1084250:intron | 30.0% | |
| ACTGTACTTGCAAAAATGAT+GGG | + | chr7_2:84518086-84518105 | None:intergenic | 30.0% | |
| TACTGTACTTGCAAAAATGA+TGG | + | chr7_2:84518087-84518106 | None:intergenic | 30.0% | |
| GATAGTACTTGTAGTTATTG+TGG | + | chr7_2:84518370-84518389 | None:intergenic | 30.0% | |
| CTAGACAAAAATGTGTTAAC+TGG | - | chr7_2:84518538-84518557 | Msa1084250:intron | 30.0% | |
| ATTGGGCTATGATAAATATC+TGG | - | chr7_2:84518726-84518745 | Msa1084250:intron | 30.0% | |
| ATTTATAAGTTCGTATCCAC+AGG | - | chr7_2:84518780-84518799 | Msa1084250:intron | 30.0% | |
| TTTATAAGTTCGTATCCACA+GGG | - | chr7_2:84518781-84518800 | Msa1084250:intron | 30.0% | |
| !! | CGGTAAAAGCGTTAAAATAA+AGG | - | chr7_2:84518822-84518841 | Msa1084250:intron | 30.0% |
| TAAATTTATAAGGTTGCCCT+AGG | - | chr7_2:84518851-84518870 | Msa1084250:intron | 30.0% | |
| !! | AAATTAACCTAGCTTTACGA+CGG | - | chr7_2:84519008-84519027 | Msa1084250:intron | 30.0% |
| TAGGGTTATAACTTAGGAAA+GGG | + | chr7_2:84519072-84519091 | None:intergenic | 30.0% | |
| ATAGGGTTATAACTTAGGAA+AGG | + | chr7_2:84519073-84519092 | None:intergenic | 30.0% | |
| CTATTTCAGGATTAAAAGCT+AGG | - | chr7_2:84519206-84519225 | Msa1084250:intron | 30.0% | |
| TTATGTGATTGAAAGAAGCT+AGG | - | chr7_2:84519259-84519278 | Msa1084250:intron | 30.0% | |
| TATGTGATTGAAAGAAGCTA+GGG | - | chr7_2:84519260-84519279 | Msa1084250:intron | 30.0% | |
| AGAGTTCGTAACAAATTACA+TGG | - | chr7_2:84519366-84519385 | Msa1084250:intron | 30.0% | |
| !!! | CAGAAATCAGGTTGTTTTTT+AGG | + | chr7_2:84520158-84520177 | None:intergenic | 30.0% |
| TATGAAGTTGTTTGCTTGTA+TGG | - | chr7_2:84520437-84520456 | Msa1084250:intron | 30.0% | |
| TGTTTGATCAAGTGTTCATT+AGG | - | chr7_2:84520522-84520541 | Msa1084250:CDS | 30.0% | |
| ATAGGATTAAACCACATTGA+AGG | + | chr7_2:84520548-84520567 | None:intergenic | 30.0% | |
| AAGCTAGATTCAATCTACAT+AGG | + | chr7_2:84520566-84520585 | None:intergenic | 30.0% | |
| ! | GATTGAATCTAGCTTATGTT+TGG | - | chr7_2:84520571-84520590 | Msa1084250:CDS | 30.0% |
| !!! | TGGATCTAGAGAAGTATTTT+GGG | + | chr7_2:84520716-84520735 | None:intergenic | 30.0% |
| AGTAAATGGAGTTACAACTA+AGG | - | chr7_2:84520853-84520872 | Msa1084250:intron | 30.0% | |
| AGCATATGAACATATCGTAA+AGG | + | chr7_2:84520959-84520978 | None:intergenic | 30.0% | |
| ! | CTCTAAAAGGAAGTTTAGAA+AGG | + | chr7_2:84521146-84521165 | None:intergenic | 30.0% |
| AAACACAATCTTTCTTGAAG+GGG | + | chr7_2:84521226-84521245 | None:intergenic | 30.0% | |
| CTAAACACAATCTTTCTTGA+AGG | + | chr7_2:84521228-84521247 | None:intergenic | 30.0% | |
| CTTCAAGAAAGATTGTGTTT+AGG | - | chr7_2:84521226-84521245 | Msa1084250:CDS | 30.0% | |
| AGTTTACTATAGAAGTCAAG+CGG | + | chr7_2:84521338-84521357 | None:intergenic | 30.0% | |
| TATCAATGAAATGGACAGTT+GGG | + | chr7_2:84521374-84521393 | None:intergenic | 30.0% | |
| TCCATTTCATTGATACTGAA+TGG | - | chr7_2:84521379-84521398 | Msa1084250:CDS | 30.0% | |
| TCCATTCAGTATCAATGAAA+TGG | + | chr7_2:84521383-84521402 | None:intergenic | 30.0% | |
| GTGAGTAAATTGACATGGAT+TGG | + | chr7_2:84515529-84515548 | None:intergenic | 35.0% | |
| CAATGGTGAGTAAATTGACA+TGG | + | chr7_2:84515534-84515553 | None:intergenic | 35.0% | |
| CAATTTACTCACCATTGACA+TGG | - | chr7_2:84515537-84515556 | Msa1084250:CDS | 35.0% | |
| !! | TCAATACCTTTTTGGAGGAA+AGG | - | chr7_2:84515750-84515769 | Msa1084250:CDS | 35.0% |
| CAAAAACCTTTCCTCCAAAA+AGG | + | chr7_2:84515759-84515778 | None:intergenic | 35.0% | |
| !! | TTTTGGAGGAAAGGTTTTTG+TGG | - | chr7_2:84515759-84515778 | Msa1084250:CDS | 35.0% |
| ! | TTTGGAGGAAAGGTTTTTGT+GGG | - | chr7_2:84515760-84515779 | Msa1084250:CDS | 35.0% |
| AGAACAAGATCAATGGTTTG+TGG | + | chr7_2:84515817-84515836 | None:intergenic | 35.0% | |
| AGTAAGGAGAACAAGATCAA+TGG | + | chr7_2:84515824-84515843 | None:intergenic | 35.0% | |
| AAATGGATGTTCCATCAATG+TGG | + | chr7_2:84516017-84516036 | None:intergenic | 35.0% | |
| TGTATGTTTGTAATCTAGGG+GGG | - | chr7_2:84516060-84516079 | Msa1084250:intron | 35.0% | |
| ! | ATGCAGCTTTTGCAAAATCA+TGG | - | chr7_2:84516114-84516133 | Msa1084250:intron | 35.0% |
| TTCAAACAAGCACTTAGGTT+AGG | - | chr7_2:84516177-84516196 | Msa1084250:intron | 35.0% | |
| TCAAACAAGCACTTAGGTTA+GGG | - | chr7_2:84516178-84516197 | Msa1084250:intron | 35.0% | |
| TTTCTGAACTTGTATAGAGG+TGG | - | chr7_2:84516384-84516403 | Msa1084250:intron | 35.0% | |
| AATCCTATCTTGAACAGAGA+GGG | - | chr7_2:84516437-84516456 | Msa1084250:intron | 35.0% | |
| GAATTGCGTTGTGAATAAGT+TGG | - | chr7_2:84516739-84516758 | Msa1084250:intron | 35.0% | |
| !! | GTCATAAATACTGGTTTGCA+AGG | + | chr7_2:84516808-84516827 | None:intergenic | 35.0% |
| TTTGACTGGATAAACCAGAT+GGG | + | chr7_2:84516847-84516866 | None:intergenic | 35.0% | |
| !! | TTTTGACTGGATAAACCAGA+TGG | + | chr7_2:84516848-84516867 | None:intergenic | 35.0% |
| TTAGCACAGCTCCAATATAT+GGG | - | chr7_2:84517155-84517174 | Msa1084250:intron | 35.0% | |
| CTAGTAAAATCTCCTGCAAT+CGG | - | chr7_2:84517224-84517243 | Msa1084250:intron | 35.0% | |
| TAGATGCTATTAATTAGGGC+TGG | - | chr7_2:84517266-84517285 | Msa1084250:intron | 35.0% | |
| TATTAATTAGGGCTGGACAT+CGG | - | chr7_2:84517273-84517292 | Msa1084250:intron | 35.0% | |
| CTGTTATAACAGTCGGAATT+GGG | + | chr7_2:84517365-84517384 | None:intergenic | 35.0% | |
| ACTGTTATAACAGTCGGAAT+TGG | + | chr7_2:84517366-84517385 | None:intergenic | 35.0% | |
| AAAGCGACTGTTATAACAGT+CGG | + | chr7_2:84517372-84517391 | None:intergenic | 35.0% | |
| ! | GTTATAACAGTCGCTTTGTT+CGG | - | chr7_2:84517375-84517394 | Msa1084250:intron | 35.0% |
| TTTAAGTATTATGGGCCACA+TGG | + | chr7_2:84517435-84517454 | None:intergenic | 35.0% | |
| ACAGGGAAAAATCATGGTTA+TGG | + | chr7_2:84517526-84517545 | None:intergenic | 35.0% | |
| CTCTTTACAGGGAAAAATCA+TGG | + | chr7_2:84517532-84517551 | None:intergenic | 35.0% | |
| TGGACTTAAGTCTCTTTACA+GGG | + | chr7_2:84517543-84517562 | None:intergenic | 35.0% | |
| ATGGACTTAAGTCTCTTTAC+AGG | + | chr7_2:84517544-84517563 | None:intergenic | 35.0% | |
| ATATAAACTTAGGCCACTCT+TGG | - | chr7_2:84517594-84517613 | Msa1084250:intron | 35.0% | |
| ATAAGAAACCTTTAGACCCA+TGG | - | chr7_2:84517692-84517711 | Msa1084250:intron | 35.0% | |
| ACCATAATTGTCATTGCACT+AGG | - | chr7_2:84517785-84517804 | Msa1084250:intron | 35.0% | |
| ! | GCACAAAGGTACAATAATGT+AGG | + | chr7_2:84518224-84518243 | None:intergenic | 35.0% |
| ! | AGCTCTAGTGATAGTAATGT+AGG | + | chr7_2:84518276-84518295 | None:intergenic | 35.0% |
| TACATTACTATCACTAGAGC+TGG | - | chr7_2:84518275-84518294 | Msa1084250:intron | 35.0% | |
| GGATGCAGTTATAAATCTAG+AGG | + | chr7_2:84518301-84518320 | None:intergenic | 35.0% | |
| !! | TTATCCGTTTTAACCAACCA+CGG | + | chr7_2:84518596-84518615 | None:intergenic | 35.0% |
| TTGGTTAAAACGGATAAACC+AGG | - | chr7_2:84518599-84518618 | Msa1084250:intron | 35.0% | |
| GGACTGTTTCAATTTCTACT+CGG | - | chr7_2:84518802-84518821 | Msa1084250:intron | 35.0% | |
| AAACTAAATCCAACTGCCTA+GGG | + | chr7_2:84518870-84518889 | None:intergenic | 35.0% | |
| AAAACTAAATCCAACTGCCT+AGG | + | chr7_2:84518871-84518890 | None:intergenic | 35.0% | |
| ! | ATTTCTTTGAGAGAGAAGAG+AGG | + | chr7_2:84518992-84519011 | None:intergenic | 35.0% |
| TTAACCAGATTGAATAACCG+TGG | - | chr7_2:84519100-84519119 | Msa1084250:intron | 35.0% | |
| ACTCTCAATTTCCTATCTCT+AGG | - | chr7_2:84519156-84519175 | Msa1084250:intron | 35.0% | |
| ATCACTTCATTAATCCTACG+TGG | - | chr7_2:84519676-84519695 | Msa1084250:intron | 35.0% | |
| TGGTGAAATCAGATCAAAAC+AGG | + | chr7_2:84519883-84519902 | None:intergenic | 35.0% | |
| !!! | CTAGTGGTTTTCTTGTTTTG+TGG | + | chr7_2:84520035-84520054 | None:intergenic | 35.0% |
| !!! | TCAGGTTGTTTTTTAGGGTT+TGG | + | chr7_2:84520152-84520171 | None:intergenic | 35.0% |
| CATGCTGCAGAAGAAAATAA+GGG | + | chr7_2:84520195-84520214 | None:intergenic | 35.0% | |
| ACATGCTGCAGAAGAAAATA+AGG | + | chr7_2:84520196-84520215 | None:intergenic | 35.0% | |
| CAAAACTTACAAGTGTCCAA+AGG | + | chr7_2:84520386-84520405 | None:intergenic | 35.0% | |
| ! | TTGGACACTTGTAAGTTTTG+TGG | - | chr7_2:84520386-84520405 | Msa1084250:intron | 35.0% |
| GTATGGTGTGTTCATATCTA+TGG | - | chr7_2:84520454-84520473 | Msa1084250:intron | 35.0% | |
| !!! | GTGGATCTAGAGAAGTATTT+TGG | + | chr7_2:84520717-84520736 | None:intergenic | 35.0% |
| TTTGTAGCTGAAATAGCTAC+AGG | + | chr7_2:84520763-84520782 | None:intergenic | 35.0% | |
| TTAAATCACCCAGATACTCA+CGG | + | chr7_2:84520800-84520819 | None:intergenic | 35.0% | |
| CTCTTATAATCAGCTATGGA+AGG | - | chr7_2:84520830-84520849 | Msa1084250:intron | 35.0% | |
| AATGGAGTTACAACTAAGGA+TGG | - | chr7_2:84520857-84520876 | Msa1084250:intron | 35.0% | |
| ATGGAGTTACAACTAAGGAT+GGG | - | chr7_2:84520858-84520877 | Msa1084250:intron | 35.0% | |
| TGAGACTCAACTACTCTAAA+AGG | + | chr7_2:84521159-84521178 | None:intergenic | 35.0% | |
| !! | TCTTGAAGGGGTATTCAAAT+GGG | + | chr7_2:84521214-84521233 | None:intergenic | 35.0% |
| !! | TTCTTGAAGGGGTATTCAAA+TGG | + | chr7_2:84521215-84521234 | None:intergenic | 35.0% |
| ATCAATGAAATGGACAGTTG+GGG | + | chr7_2:84521373-84521392 | None:intergenic | 35.0% | |
| GTATCAATGAAATGGACAGT+TGG | + | chr7_2:84521375-84521394 | None:intergenic | 35.0% | |
| AAAAAGTTGAAGAGTCGTTG+AGG | - | chr7_2:84521466-84521485 | Msa1084250:exon | 35.0% | |
| AAAAGTTGAAGAGTCGTTGA+GGG | - | chr7_2:84521467-84521486 | Msa1084250:exon | 35.0% | |
| TCTTTGAGCTTCCATGTCAA+TGG | + | chr7_2:84515551-84515570 | None:intergenic | 40.0% | |
| TGGAAGCTCAAAGAGCAAAT+AGG | - | chr7_2:84515557-84515576 | Msa1084250:CDS | 40.0% | |
| TTCTCTTCTCCCTTGCTAAT+AGG | - | chr7_2:84515617-84515636 | Msa1084250:CDS | 40.0% | |
| ! | TGCAGGCTTCAATACCTTTT+TGG | - | chr7_2:84515742-84515761 | Msa1084250:CDS | 40.0% |
| ! | AGGCTTCAATACCTTTTTGG+AGG | - | chr7_2:84515745-84515764 | Msa1084250:CDS | 40.0% |
| TATCTTTGTCAGTGCTTCAC+AGG | - | chr7_2:84515925-84515944 | Msa1084250:CDS | 40.0% | |
| GAATCCTATCTTGAACAGAG+AGG | - | chr7_2:84516436-84516455 | Msa1084250:intron | 40.0% | |
| ATCCTATCTTGAACAGAGAG+GGG | - | chr7_2:84516438-84516457 | Msa1084250:intron | 40.0% | |
| AGAATGCGTGAAACGTGAAT+AGG | + | chr7_2:84516662-84516681 | None:intergenic | 40.0% | |
| AAAGAATGTATCAGCCCATC+TGG | - | chr7_2:84516830-84516849 | Msa1084250:intron | 40.0% | |
| GTAAGGGTAACAACTTCAGA+TGG | + | chr7_2:84516974-84516993 | None:intergenic | 40.0% | |
| TCAGTTGCACCAATTGTTCA+CGG | + | chr7_2:84516997-84517016 | None:intergenic | 40.0% | |
| AAAAGAGGTTGCTCTCTAGT+TGG | - | chr7_2:84517062-84517081 | Msa1084250:intron | 40.0% | |
| AAAGAGGTTGCTCTCTAGTT+GGG | - | chr7_2:84517063-84517082 | Msa1084250:intron | 40.0% | |
| ! | TAAAGAGTGCACTTCTTAGC+TGG | - | chr7_2:84517086-84517105 | Msa1084250:intron | 40.0% |
| CATATATTGGAGCTGTGCTA+AGG | + | chr7_2:84517156-84517175 | None:intergenic | 40.0% | |
| CTTAGCACAGCTCCAATATA+TGG | - | chr7_2:84517154-84517173 | Msa1084250:intron | 40.0% | |
| ACAGCTCCAATATATGGGAT+AGG | - | chr7_2:84517160-84517179 | Msa1084250:intron | 40.0% | |
| !! | CAATCGGATTTTGATGCAGT+TGG | - | chr7_2:84517240-84517259 | Msa1084250:intron | 40.0% |
| !!! | CTTGGATGGATTGAGGTTTT+GGG | + | chr7_2:84517321-84517340 | None:intergenic | 40.0% |
| !! | GTTCGGTTAAGACGGATTAA+CGG | - | chr7_2:84517392-84517411 | Msa1084250:intron | 40.0% |
| !! | TTCGGTTAAGACGGATTAAC+GGG | - | chr7_2:84517393-84517412 | Msa1084250:intron | 40.0% |
| TTAAATGACCTTGCCAAGAG+TGG | + | chr7_2:84517610-84517629 | None:intergenic | 40.0% | |
| GCCTAGTGCAATGACAATTA+TGG | + | chr7_2:84517789-84517808 | None:intergenic | 40.0% | |
| AATTGTCATTGCACTAGGCA+AGG | - | chr7_2:84517790-84517809 | Msa1084250:intron | 40.0% | |
| TGTACCTTTGTGCAACAGTT+TGG | - | chr7_2:84518231-84518250 | Msa1084250:intron | 40.0% | |
| GTACCTTTGTGCAACAGTTT+GGG | - | chr7_2:84518232-84518251 | Msa1084250:intron | 40.0% | |
| TAACCCAAACTGTTGCACAA+AGG | + | chr7_2:84518238-84518257 | None:intergenic | 40.0% | |
| ! | TTTAACCAACCACGGGTTAA+CGG | + | chr7_2:84518588-84518607 | None:intergenic | 40.0% |
| ! | TAACCCGTGGTTGGTTAAAA+CGG | - | chr7_2:84518589-84518608 | Msa1084250:intron | 40.0% |
| !! | TATCCGTTTTAACCAACCAC+GGG | + | chr7_2:84518595-84518614 | None:intergenic | 40.0% |
| AACGGATAAACCAGGTTACT+CGG | - | chr7_2:84518607-84518626 | Msa1084250:intron | 40.0% | |
| AACCCATGTATGGACATTGT+TGG | - | chr7_2:84518632-84518651 | Msa1084250:intron | 40.0% | |
| GTCCAACAATGTCCATACAT+GGG | + | chr7_2:84518637-84518656 | None:intergenic | 40.0% | |
| TGTCCAACAATGTCCATACA+TGG | + | chr7_2:84518638-84518657 | None:intergenic | 40.0% | |
| ATACTAGTATAGCAGCGGTT+CGG | + | chr7_2:84518708-84518727 | None:intergenic | 40.0% | |
| AACCGCTGCTATACTAGTAT+TGG | - | chr7_2:84518708-84518727 | Msa1084250:intron | 40.0% | |
| ACCGCTGCTATACTAGTATT+GGG | - | chr7_2:84518709-84518728 | Msa1084250:intron | 40.0% | |
| AGAAATTGAAACAGTCCCTG+TGG | + | chr7_2:84518799-84518818 | None:intergenic | 40.0% | |
| TGAGCAATAGAGGATTCGAA+AGG | + | chr7_2:84518955-84518974 | None:intergenic | 40.0% | |
| TTACTCACAGTGAGCAATAG+AGG | + | chr7_2:84518965-84518984 | None:intergenic | 40.0% | |
| AGTTAATCCGTCGTAAAGCT+AGG | + | chr7_2:84519018-84519037 | None:intergenic | 40.0% | |
| AACACTAGGAACCTAGAGAT+AGG | + | chr7_2:84519170-84519189 | None:intergenic | 40.0% | |
| GATCACAAAGACTCATCTCA+TGG | - | chr7_2:84519395-84519414 | Msa1084250:intron | 40.0% | |
| AACCAGAACCAACTATGAGT+TGG | - | chr7_2:84519489-84519508 | Msa1084250:intron | 40.0% | |
| ACCAGAACCAACTATGAGTT+GGG | - | chr7_2:84519490-84519509 | Msa1084250:intron | 40.0% | |
| AGACAGAAACAGAGCATAGA+CGG | + | chr7_2:84519550-84519569 | None:intergenic | 40.0% | |
| AAACAGGAATAAGAGCTCGA+CGG | + | chr7_2:84519867-84519886 | None:intergenic | 40.0% | |
| ! | GTGCATCAACACTAGTTTCT+TGG | + | chr7_2:84519958-84519977 | None:intergenic | 40.0% |
| ! | TGTTTTGTGGAGTTGTGTCT+GGG | + | chr7_2:84520022-84520041 | None:intergenic | 40.0% |
| !! | TTGTTTTGTGGAGTTGTGTC+TGG | + | chr7_2:84520023-84520042 | None:intergenic | 40.0% |
| CATGTTCGATCCAAAAACCA+TGG | - | chr7_2:84520211-84520230 | Msa1084250:intron | 40.0% | |
| ATCCAAAAACCATGGTCCTT+AGG | - | chr7_2:84520219-84520238 | Msa1084250:intron | 40.0% | |
| TCCAAAAACCATGGTCCTTA+GGG | - | chr7_2:84520220-84520239 | Msa1084250:intron | 40.0% | |
| AAACAAAACCCTAAGGACCA+TGG | + | chr7_2:84520231-84520250 | None:intergenic | 40.0% | |
| GTACGTGGTTTGACAAAAGA+TGG | - | chr7_2:84520328-84520347 | Msa1084250:intron | 40.0% | |
| TGTTCATTAGGCCTTCAATG+TGG | - | chr7_2:84520534-84520553 | Msa1084250:CDS | 40.0% | |
| TTTCCAAACCGTGAGTATCT+GGG | - | chr7_2:84520789-84520808 | Msa1084250:intron | 40.0% | |
| GAGTATCTGGGTGATTTAAC+TGG | - | chr7_2:84520801-84520820 | Msa1084250:intron | 40.0% | |
| TCAGCTATGGAAGGAGTAAA+TGG | - | chr7_2:84520839-84520858 | Msa1084250:intron | 40.0% | |
| TGGAGTTACAACTAAGGATG+GGG | - | chr7_2:84520859-84520878 | Msa1084250:intron | 40.0% | |
| !! | CTAAAAGCATCACCTTGCAA+TGG | + | chr7_2:84521099-84521118 | None:intergenic | 40.0% |
| ! | GCAAGGTGATGCTTTTAGTA+AGG | - | chr7_2:84521101-84521120 | Msa1084250:intron | 40.0% |
| !! | CTTGAAGGGGTATTCAAATG+GGG | + | chr7_2:84521213-84521232 | None:intergenic | 40.0% |
| GGTGAAGAAGAATCAGCATG+AGG | + | chr7_2:84515796-84515815 | None:intergenic | 45.0% | |
| GTGCTTCACAGGTACAAATG+TGG | - | chr7_2:84515936-84515955 | Msa1084250:intron | 45.0% | |
| TGAGCTTTGCAAAATCACGG+TGG | + | chr7_2:84516150-84516169 | None:intergenic | 45.0% | |
| CGGTGAGCTTTGCAAAATCA+CGG | + | chr7_2:84516153-84516172 | None:intergenic | 45.0% | |
| CAGAGAGCTACGACTGATAT+CGG | - | chr7_2:84516337-84516356 | Msa1084250:intron | 45.0% | |
| ATTTGCAGTACCATTCCTGC+TGG | - | chr7_2:84516941-84516960 | Msa1084250:intron | 45.0% | |
| TGGAAAATCACCAGCAGGAA+TGG | + | chr7_2:84516954-84516973 | None:intergenic | 45.0% | |
| TCAGATGGAAAATCACCAGC+AGG | + | chr7_2:84516959-84516978 | None:intergenic | 45.0% | |
| TACCCTTACCCGTGAACAAT+TGG | - | chr7_2:84516985-84517004 | Msa1084250:intron | 45.0% | |
| CACCAATTGTTCACGGGTAA+GGG | + | chr7_2:84516990-84517009 | None:intergenic | 45.0% | |
| CAGTTGCACCAATTGTTCAC+GGG | + | chr7_2:84516996-84517015 | None:intergenic | 45.0% | |
| CAATTGGTGCAACTGAAGCT+AGG | - | chr7_2:84517001-84517020 | Msa1084250:intron | 45.0% | |
| TGCACTTCTTAGCTGGAAGA+AGG | - | chr7_2:84517093-84517112 | Msa1084250:intron | 45.0% | |
| CTGCATCAAAATCCGATTGC+AGG | + | chr7_2:84517239-84517258 | None:intergenic | 45.0% | |
| !!! | GCTTGGATGGATTGAGGTTT+TGG | + | chr7_2:84517322-84517341 | None:intergenic | 45.0% |
| ! | GTCGCTTTGTTCGGTTAAGA+CGG | - | chr7_2:84517384-84517403 | Msa1084250:intron | 45.0% |
| !! | GTTAAGACGGATTAACGGGA+GGG | - | chr7_2:84517397-84517416 | Msa1084250:intron | 45.0% |
| AACCTTTAGACCCATGGTCA+AGG | - | chr7_2:84517698-84517717 | Msa1084250:intron | 45.0% | |
| CTATGTAGAGCCTTGACCAT+GGG | + | chr7_2:84517711-84517730 | None:intergenic | 45.0% | |
| ACTATGTAGAGCCTTGACCA+TGG | + | chr7_2:84517712-84517731 | None:intergenic | 45.0% | |
| CAGTTGCTGATGCTACAACA+TGG | - | chr7_2:84517911-84517930 | Msa1084250:intron | 45.0% | |
| CACATTGCTGCTAGATTGCT+AGG | + | chr7_2:84518456-84518475 | None:intergenic | 45.0% | |
| ATGTGTTAACTGGCCCAATC+CGG | - | chr7_2:84518548-84518567 | Msa1084250:intron | 45.0% | |
| ! | TTAACCAACCACGGGTTAAC+GGG | + | chr7_2:84518587-84518606 | None:intergenic | 45.0% |
| ACGGATAAACCAGGTTACTC+GGG | - | chr7_2:84518608-84518627 | Msa1084250:intron | 45.0% | |
| TTACTCGGGTAACCCATGTA+TGG | - | chr7_2:84518622-84518641 | Msa1084250:intron | 45.0% | |
| TGGACATTGTTGGACACCAA+TGG | - | chr7_2:84518642-84518661 | Msa1084250:intron | 45.0% | |
| CATTGTTGGACACCAATGGA+CGG | - | chr7_2:84518646-84518665 | Msa1084250:intron | 45.0% | |
| TACTAGTATAGCAGCGGTTC+GGG | + | chr7_2:84518707-84518726 | None:intergenic | 45.0% | |
| GCCCAATACTAGTATAGCAG+CGG | + | chr7_2:84518713-84518732 | None:intergenic | 45.0% | |
| GCTTCCACGGTTATTCAATC+TGG | + | chr7_2:84519107-84519126 | None:intergenic | 45.0% | |
| ACGTTCTGACTTTGCTTCCA+CGG | + | chr7_2:84519120-84519139 | None:intergenic | 45.0% | |
| ! | ACCCAACTCATAGTTGGTTC+TGG | + | chr7_2:84519494-84519513 | None:intergenic | 45.0% |
| GATCTCACCCAACTCATAGT+TGG | + | chr7_2:84519500-84519519 | None:intergenic | 45.0% | |
| GCAGACAAACTTTCCTATCG+TGG | - | chr7_2:84519701-84519720 | Msa1084250:intron | 45.0% | |
| TGGGACAAAGGATTTGTCAC+TGG | + | chr7_2:84519759-84519778 | None:intergenic | 45.0% | |
| TGGCACGATGCTTCATTCTT+AGG | - | chr7_2:84519813-84519832 | Msa1084250:intron | 45.0% | |
| AACAGGAATAAGAGCTCGAC+GGG | + | chr7_2:84519866-84519885 | None:intergenic | 45.0% | |
| !! | AGTGTTGATGCACTGTCATC+AGG | - | chr7_2:84519965-84519984 | Msa1084250:CDS | 45.0% |
| ACCTGGTGTCCAAGTTAAGA+AGG | - | chr7_2:84519990-84520009 | Msa1084250:CDS | 45.0% | |
| ! | ACCCTAAGGACCATGGTTTT+TGG | + | chr7_2:84520224-84520243 | None:intergenic | 45.0% |
| CGTGGTTTGACAAAAGATGG+AGG | - | chr7_2:84520331-84520350 | Msa1084250:intron | 45.0% | |
| CAAAAGATGGAGGCAGTAAC+TGG | - | chr7_2:84520341-84520360 | Msa1084250:intron | 45.0% | |
| ! | TAACTGGAGAAGCTTTGGCT+GGG | - | chr7_2:84520357-84520376 | Msa1084250:intron | 45.0% |
| GTTTCCAAACCGTGAGTATC+TGG | - | chr7_2:84520788-84520807 | Msa1084250:intron | 45.0% | |
| ! | ATTGTGTCACTCGTGTGGTT+TGG | + | chr7_2:84521441-84521460 | None:intergenic | 45.0% |
| ! | GACATATTGTGTCACTCGTG+TGG | + | chr7_2:84521446-84521465 | None:intergenic | 45.0% |
| AGCAAGGGAGAAGAGAACAG+TGG | + | chr7_2:84515614-84515633 | None:intergenic | 50.0% | |
| ! | TGTGTCGACGTGTCAAACAC+TGG | + | chr7_2:84515874-84515893 | None:intergenic | 50.0% |
| AGCCCCTCTCTGTTCAAGAT+AGG | + | chr7_2:84516443-84516462 | None:intergenic | 50.0% | |
| GCACCAATTGTTCACGGGTA+AGG | + | chr7_2:84516991-84517010 | None:intergenic | 50.0% | |
| AATTAGGGCTGGACATCGGT+CGG | - | chr7_2:84517277-84517296 | Msa1084250:intron | 50.0% | |
| !! | GGTTAAGACGGATTAACGGG+AGG | - | chr7_2:84517396-84517415 | Msa1084250:intron | 50.0% |
| AACTTAGGCCACTCTTGGCA+AGG | - | chr7_2:84517599-84517618 | Msa1084250:intron | 50.0% | |
| AGCCTTGACCATGGGTCTAA+AGG | + | chr7_2:84517703-84517722 | None:intergenic | 50.0% | |
| AGCAGCAATGTGAGAGACCA+TGG | - | chr7_2:84518464-84518483 | Msa1084250:intron | 50.0% | |
| ATAAGGTTGCCCTAGGCAGT+TGG | - | chr7_2:84518858-84518877 | Msa1084250:intron | 50.0% | |
| ! | AGAAGCTTGGGGTGCGATTT+TGG | + | chr7_2:84519573-84519592 | None:intergenic | 50.0% |
| AAAATCGCACCCCAAGCTTC+TGG | - | chr7_2:84519572-84519591 | Msa1084250:intron | 50.0% | |
| TGAAGTGATCGTGCCACGAT+TGG | + | chr7_2:84519665-84519684 | None:intergenic | 50.0% | |
| AAGTTTGTCTGCTGCCACGT+AGG | + | chr7_2:84519693-84519712 | None:intergenic | 50.0% | |
| TTTCGTGCCACGATGAAGTC+TGG | + | chr7_2:84519733-84519752 | None:intergenic | 50.0% | |
| ! | GTTTGCTGAACGTGGGACAA+AGG | + | chr7_2:84519771-84519790 | None:intergenic | 50.0% |
| !! | ATGAAGCATCGTGCCACGAT+GGG | + | chr7_2:84519809-84519828 | None:intergenic | 50.0% |
| !! | AATGAAGCATCGTGCCACGA+TGG | + | chr7_2:84519810-84519829 | None:intergenic | 50.0% |
| ! | GCCTTCTTAACTTGGACACC+AGG | + | chr7_2:84519994-84520013 | None:intergenic | 50.0% |
| GGGCTTAGGCCTTCTTAACT+TGG | + | chr7_2:84520002-84520021 | None:intergenic | 50.0% | |
| TCTGAACTGAAACGGCGCTA+GGG | + | chr7_2:84520063-84520082 | None:intergenic | 50.0% | |
| ATCTGAACTGAAACGGCGCT+AGG | + | chr7_2:84520064-84520083 | None:intergenic | 50.0% | |
| GGCAGTAACTGGAGAAGCTT+TGG | - | chr7_2:84520352-84520371 | Msa1084250:intron | 50.0% | |
| ! | GTAACTGGAGAAGCTTTGGC+TGG | - | chr7_2:84520356-84520375 | Msa1084250:intron | 50.0% |
| TCACCCAGATACTCACGGTT+TGG | + | chr7_2:84520795-84520814 | None:intergenic | 50.0% | |
| ! | TCAAGTTGCAGCAGCTACTG+AGG | - | chr7_2:84520886-84520905 | Msa1084250:intron | 50.0% |
| ! | GGACATCGGTCGGTTTAGGT+CGG | - | chr7_2:84517287-84517306 | Msa1084250:intron | 55.0% |
| ! | GGTCGGTTTAGGTCGGTAGT+CGG | - | chr7_2:84517294-84517313 | Msa1084250:intron | 55.0% |
| ! | GTCGGTTTAGGTCGGTAGTC+GGG | - | chr7_2:84517295-84517314 | Msa1084250:intron | 55.0% |
| CCTCAATCCATCCAAGCCCA+CGG | - | chr7_2:84517325-84517344 | Msa1084250:intron | 55.0% | |
| TTCTCAACCGTGGGCTTGGA+TGG | + | chr7_2:84517335-84517354 | None:intergenic | 55.0% | |
| CATGTTCTCAACCGTGGGCT+TGG | + | chr7_2:84517339-84517358 | None:intergenic | 55.0% | |
| AGCCCACGGTTGAGAACATG+TGG | - | chr7_2:84517339-84517358 | Msa1084250:intron | 55.0% | |
| GGCCACATGTTCTCAACCGT+GGG | + | chr7_2:84517344-84517363 | None:intergenic | 55.0% | |
| GGATTAACGGGAGGGTTGCT+CGG | - | chr7_2:84517405-84517424 | Msa1084250:intron | 55.0% | |
| GGGTTGCTCGGTTAACCATG+TGG | - | chr7_2:84517417-84517436 | Msa1084250:intron | 55.0% | |
| TGCTTGCTTGCTTCGCTCCA+TGG | + | chr7_2:84518484-84518503 | None:intergenic | 55.0% | |
| !! | GGTTAACGGGCTTTCTGGGT+CGG | + | chr7_2:84518574-84518593 | None:intergenic | 55.0% |
| !! | CACGGGTTAACGGGCTTTCT+GGG | + | chr7_2:84518578-84518597 | None:intergenic | 55.0% |
| AAAGCCCGTTAACCCGTGGT+TGG | - | chr7_2:84518580-84518599 | Msa1084250:intron | 55.0% | |
| ! | CATGGGTTACCCGAGTAACC+TGG | + | chr7_2:84518620-84518639 | None:intergenic | 55.0% |
| TGGACACCAATGGACGGATG+CGG | - | chr7_2:84518652-84518671 | Msa1084250:intron | 55.0% | |
| AATGGACGGATGCGGATGGT+GGG | - | chr7_2:84518660-84518679 | Msa1084250:intron | 55.0% | |
| ! | AGTATAGCAGCGGTTCGGGT+CGG | + | chr7_2:84518703-84518722 | None:intergenic | 55.0% |
| GAGATCCACTGCGTGTTCTG+CGG | - | chr7_2:84519514-84519533 | Msa1084250:intron | 55.0% | |
| AACAGAGCATAGACGGCACC+AGG | + | chr7_2:84519543-84519562 | None:intergenic | 55.0% | |
| CAGAAGCGACCAGAAGCTTG+GGG | + | chr7_2:84519584-84519603 | None:intergenic | 55.0% | |
| CCAGAAGCGACCAGAAGCTT+GGG | + | chr7_2:84519585-84519604 | None:intergenic | 55.0% | |
| TCGTAACGTGGCACGATGGT+GGG | + | chr7_2:84519641-84519660 | None:intergenic | 55.0% | |
| ATCGTAACGTGGCACGATGG+TGG | + | chr7_2:84519642-84519661 | None:intergenic | 55.0% | |
| TGGATCGTAACGTGGCACGA+TGG | + | chr7_2:84519645-84519664 | None:intergenic | 55.0% | |
| GCCACGTTACGATCCAATCG+TGG | - | chr7_2:84519649-84519668 | Msa1084250:intron | 55.0% | |
| GCCACGATTGGATCGTAACG+TGG | + | chr7_2:84519653-84519672 | None:intergenic | 55.0% | |
| ! | AGTCTGGAACGTGCCACGAT+AGG | + | chr7_2:84519717-84519736 | None:intergenic | 55.0% |
| GCACGTTCCAGACTTCATCG+TGG | - | chr7_2:84519723-84519742 | Msa1084250:intron | 55.0% | |
| ! | GTGGCACGTTTGCTGAACGT+GGG | + | chr7_2:84519778-84519797 | None:intergenic | 55.0% |
| TGCACTGTCATCAGGCTACC+TGG | - | chr7_2:84519973-84519992 | Msa1084250:CDS | 55.0% | |
| GTGGAGTTGTGTCTGGGCTT+AGG | + | chr7_2:84520016-84520035 | None:intergenic | 55.0% | |
| ! | AGCTTTGGCTGGGCAACCTT+TGG | - | chr7_2:84520367-84520386 | Msa1084250:intron | 55.0% |
| AGTTGCAGCAGCTACTGAGG+AGG | - | chr7_2:84520889-84520908 | Msa1084250:intron | 55.0% | |
| GCAGCTACTGAGGAGGTAAC+TGG | - | chr7_2:84520896-84520915 | Msa1084250:intron | 55.0% | |
| ACTGAGGAGGTAACTGGAGC+TGG | - | chr7_2:84520902-84520921 | Msa1084250:intron | 55.0% | |
| ! | GGCTGGACATCGGTCGGTTT+AGG | - | chr7_2:84517283-84517302 | Msa1084250:intron | 60.0% |
| !! | CCGTGGGCTTGGATGGATTG+AGG | + | chr7_2:84517328-84517347 | None:intergenic | 60.0% |
| GGGCCACATGTTCTCAACCG+TGG | + | chr7_2:84517345-84517364 | None:intergenic | 60.0% | |
| CTTTCTGGGTCGGCCGGATT+GGG | + | chr7_2:84518564-84518583 | None:intergenic | 60.0% | |
| !! | CCACGGGTTAACGGGCTTTC+TGG | + | chr7_2:84518579-84518598 | None:intergenic | 60.0% |
| CCAGAAAGCCCGTTAACCCG+TGG | - | chr7_2:84518576-84518595 | Msa1084250:intron | 60.0% | |
| CACCAATGGACGGATGCGGA+TGG | - | chr7_2:84518656-84518675 | Msa1084250:intron | 60.0% | |
| CACCATCCGCATCCGTCCAT+TGG | + | chr7_2:84518661-84518680 | None:intergenic | 60.0% | |
| CAATGGACGGATGCGGATGG+TGG | - | chr7_2:84518659-84518678 | Msa1084250:intron | 60.0% | |
| !! | CGGATGCGGATGGTGGGAAA+TGG | - | chr7_2:84518666-84518685 | Msa1084250:intron | 60.0% |
| GGAAACCGCAGAACACGCAG+TGG | + | chr7_2:84519522-84519541 | None:intergenic | 60.0% | |
| CTGCGTGTTCTGCGGTTTCC+TGG | - | chr7_2:84519522-84519541 | Msa1084250:intron | 60.0% | |
| CCCAAGCTTCTGGTCGCTTC+TGG | - | chr7_2:84519582-84519601 | Msa1084250:intron | 60.0% | |
| GCCAGAAGCGACCAGAAGCT+TGG | + | chr7_2:84519586-84519605 | None:intergenic | 60.0% | |
| ! | CGTGGCACGTTTGCTGAACG+TGG | + | chr7_2:84519779-84519798 | None:intergenic | 60.0% |
| CGGCGCTAGGGTTTCACTAG+TGG | + | chr7_2:84520051-84520070 | None:intergenic | 60.0% | |
| GCAGCTGCTGCACCATTGCA+AGG | - | chr7_2:84521084-84521103 | Msa1084250:intron | 60.0% | |
| GCTTTCTGGGTCGGCCGGAT+TGG | + | chr7_2:84518565-84518584 | None:intergenic | 65.0% | |
| ! | AACGGGCTTTCTGGGTCGGC+CGG | + | chr7_2:84518570-84518589 | None:intergenic | 65.0% |
| !! | CGGTTCGGGTCGGTTTTCGC+TGG | + | chr7_2:84518693-84518712 | None:intergenic | 65.0% |
| GCCACGAGATGCTCCCATCG+TGG | - | chr7_2:84519793-84519812 | Msa1084250:intron | 65.0% | |
| !! | GCCACGATGGGAGCATCTCG+TGG | + | chr7_2:84519797-84519816 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84515520 | 84521494 | 84515520 | ID=Msa1084250;Name=Msa1084250 |
| chr7_2 | mRNA | 84515520 | 84521494 | 84515520 | ID=Msa1084250-mRNA-1;Parent=Msa1084250;Name=Msa1084250-mRNA-1;_AED=0.40;_eAED=0.49;_QI=13|0.5|0.6|1|0.25|0.6|5|0|329 |
| chr7_2 | exon | 84515520 | 84515950 | 84515520 | ID=Msa1084250-mRNA-1:exon:22644;Parent=Msa1084250-mRNA-1 |
| chr7_2 | exon | 84519833 | 84520065 | 84519833 | ID=Msa1084250-mRNA-1:exon:22643;Parent=Msa1084250-mRNA-1 |
| chr7_2 | exon | 84520496 | 84520613 | 84520496 | ID=Msa1084250-mRNA-1:exon:22642;Parent=Msa1084250-mRNA-1 |
| chr7_2 | exon | 84521166 | 84521267 | 84521166 | ID=Msa1084250-mRNA-1:exon:22641;Parent=Msa1084250-mRNA-1 |
| chr7_2 | exon | 84521376 | 84521494 | 84521376 | ID=Msa1084250-mRNA-1:exon:22640;Parent=Msa1084250-mRNA-1 |
| chr7_2 | five_prime_UTR | 84521482 | 84521494 | 84521482 | ID=Msa1084250-mRNA-1:five_prime_utr;Parent=Msa1084250-mRNA-1 |
| chr7_2 | CDS | 84521376 | 84521481 | 84521376 | ID=Msa1084250-mRNA-1:cds;Parent=Msa1084250-mRNA-1 |
| chr7_2 | CDS | 84521166 | 84521267 | 84521166 | ID=Msa1084250-mRNA-1:cds;Parent=Msa1084250-mRNA-1 |
| chr7_2 | CDS | 84520496 | 84520613 | 84520496 | ID=Msa1084250-mRNA-1:cds;Parent=Msa1084250-mRNA-1 |
| chr7_2 | CDS | 84519833 | 84520065 | 84519833 | ID=Msa1084250-mRNA-1:cds;Parent=Msa1084250-mRNA-1 |
| chr7_2 | CDS | 84515520 | 84515950 | 84515520 | ID=Msa1084250-mRNA-1:cds;Parent=Msa1084250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
