AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1084900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084900 MtrunA17_Chr6g0460371 93.220 118 7 1 226 343 104 220 7.36e-68 232
Msa1084900 MtrunA17_Chr5g0433851 52.778 180 63 5 3 180 5 164 4.54e-47 169
Msa1084900 MtrunA17_Chr3g0109841 55.782 147 49 4 399 533 124 266 3.75e-38 149
Msa1084900 MtrunA17_Chr3g0109791 73.563 87 22 1 3 89 20 105 1.09e-36 139
Msa1084900 MtrunA17_Chr2g0328811 93.750 64 4 0 359 422 94 157 5.15e-33 130
Msa1084900 MtrunA17_Chr1g0173711 77.273 66 14 1 359 423 94 159 5.04e-29 118
Msa1084900 MtrunA17_Chr7g0258001 80.000 60 12 0 359 418 94 153 5.82e-28 115
Msa1084900 MtrunA17_Chr6g0481061 72.973 74 20 0 16 89 32 105 1.11e-27 115
Msa1084900 MtrunA17_Chr5g0433761 75.000 72 18 0 462 533 192 263 2.62e-26 113
Msa1084900 MtrunA17_Chr7g0276421 72.464 69 19 0 21 89 6 74 1.53e-25 111
Msa1084900 MtrunA17_Chr6g0481131 42.177 147 69 5 399 533 123 265 1.13e-20 96.3
Msa1084900 MtrunA17_Chr6g0469431 46.465 99 53 0 30 128 39 137 2.59e-20 90.1
Msa1084900 MtrunA17_Chr1g0181771 60.294 68 27 0 22 89 28 95 3.54e-20 91.3
Msa1084900 MtrunA17_Chr6g0481171 56.579 76 30 1 458 533 65 137 4.02e-20 94.4
Msa1084900 MtrunA17_Chr8g0348391 45.714 105 52 1 30 129 53 157 1.43e-19 90.1
Msa1084900 MtrunA17_Chr5g0396491 84.000 50 7 1 86 134 140 189 3.10e-17 84.3
Msa1084900 MtrunA17_Chr4g0034381 76.596 47 11 0 123 169 134 180 2.36e-16 79.0
Msa1084900 MtrunA17_Chr4g0038851 70.000 50 14 1 86 134 132 181 5.38e-15 77.4
Msa1084900 MtrunA17_Chr7g0269581 50.000 70 35 0 464 533 190 259 2.89e-13 72.8
Msa1084900 MtrunA17_Chr4g0070011 38.889 90 50 1 449 533 170 259 7.92e-12 68.2
Msa1084900 MtrunA17_Chr1g0195241 42.045 88 46 1 451 533 157 244 9.79e-12 67.8
Msa1084900 MtrunA17_Chr2g0301621 38.961 77 46 1 457 533 182 257 7.40e-11 65.1
Msa1084900 MtrunA17_Chr3g0085681 68.293 41 13 0 86 126 109 149 8.80e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084900 AT1G17760.1 69.492 118 35 1 226 343 104 220 1.14e-49 182
Msa1084900 AT5G17300.1 75.000 76 19 0 19 94 33 108 1.55e-29 120
Msa1084900 AT3G57650.1 76.923 65 14 1 359 422 93 157 3.81e-28 116
Msa1084900 AT5G37260.1 72.603 73 20 0 21 93 16 88 1.31e-27 112
Msa1084900 AT1G51260.1 79.661 59 12 0 359 417 94 152 2.61e-27 114
Msa1084900 AT2G46830.1 70.833 72 21 0 18 89 1 72 1.85e-25 110
Msa1084900 AT1G18330.1 74.194 62 16 0 29 90 38 99 1.35e-24 105
Msa1084900 AT3G10113.1 74.194 62 16 0 29 90 53 114 1.53e-24 105
Msa1084900 AT1G01060.8 66.667 72 24 0 18 89 1 72 1.82e-24 108
Msa1084900 AT1G01060.2 66.667 72 24 0 18 89 1 72 1.82e-24 108
Msa1084900 AT1G01060.3 66.667 72 24 0 18 89 1 72 1.82e-24 108
Msa1084900 AT1G01060.1 66.667 72 24 0 18 89 1 72 1.82e-24 108
Msa1084900 AT1G01060.7 66.667 72 24 0 18 89 1 72 1.82e-24 108
Msa1084900 AT1G01060.4 66.667 72 24 0 18 89 1 72 1.85e-24 108
Msa1084900 AT1G18330.2 74.194 62 16 0 29 90 64 125 2.59e-24 105
Msa1084900 AT5G37180.1 43.357 143 66 5 401 533 118 255 3.93e-21 98.2
Msa1084900 AT3G09600.4 50.549 91 45 0 30 120 32 122 1.34e-19 89.4
Msa1084900 AT3G09600.2 50.549 91 45 0 30 120 32 122 1.39e-19 89.7
Msa1084900 AT3G09600.6 50.549 91 45 0 30 120 32 122 1.39e-19 89.7
Msa1084900 AT3G09600.1 50.549 91 45 0 30 120 32 122 1.78e-19 89.7
Msa1084900 AT3G09600.7 50.549 91 45 0 30 120 32 122 1.78e-19 89.7
Msa1084900 AT4G01280.1 45.098 102 56 0 30 131 48 149 3.32e-19 89.0
Msa1084900 AT4G01280.2 45.098 102 56 0 30 131 48 149 3.34e-19 89.0
Msa1084900 AT5G37180.2 59.701 67 27 0 467 533 1 67 4.36e-19 91.3
Msa1084900 AT5G52660.1 51.250 80 39 0 30 109 61 140 3.61e-18 86.3
Msa1084900 AT5G52660.2 51.250 80 39 0 30 109 61 140 3.87e-18 86.3
Msa1084900 AT5G02840.4 46.392 97 52 0 24 120 31 127 1.69e-17 83.2
Msa1084900 AT5G02840.3 48.352 91 47 0 30 120 37 127 2.40e-17 83.2
Msa1084900 AT1G01520.2 51.250 80 39 0 30 109 50 129 2.56e-17 82.4
Msa1084900 AT1G01520.4 51.250 80 39 0 30 109 50 129 2.56e-17 82.4
Msa1084900 AT5G02840.5 46.392 97 52 0 24 120 31 127 2.78e-17 82.8
Msa1084900 AT5G02840.1 48.352 91 47 0 30 120 37 127 3.16e-17 82.8
Msa1084900 AT5G02840.2 48.352 91 47 0 30 120 37 127 3.16e-17 82.8
Msa1084900 AT1G01520.3 51.250 80 39 0 30 109 50 129 3.25e-17 82.8
Msa1084900 AT1G01520.1 51.250 80 39 0 30 109 50 129 3.43e-17 82.8
Msa1084900 AT1G73370.3 36.879 141 74 3 405 533 128 265 5.46e-15 79.0
Msa1084900 AT1G73370.1 36.879 141 74 3 405 533 128 265 5.46e-15 79.0
Msa1084900 AT1G73370.2 36.879 141 74 3 405 533 84 221 6.03e-15 78.6
Msa1084900 AT4G34360.1 65.957 47 16 0 123 169 129 175 4.84e-14 72.4
Msa1084900 AT1G50420.1 66.667 48 15 1 88 134 145 192 4.26e-13 72.0
Msa1084900 AT5G49190.2 43.421 76 40 1 458 533 176 248 2.06e-12 70.5
Msa1084900 AT5G49190.3 43.421 76 40 1 458 533 120 192 2.08e-12 70.5
Msa1084900 AT4G02280.1 44.286 70 39 0 464 533 192 261 2.15e-12 70.5
Msa1084900 AT5G49190.1 43.421 76 40 1 458 533 186 258 2.20e-12 70.5

Find 152 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAGAAACTATTTCTTTA+AGG 0.117142 7_2:-85235566 None:intergenic
GTTAATAAAAGTCACATATT+TGG 0.150657 7_2:-85235456 None:intergenic
TTCTCTATCCATGGTTATTT+TGG 0.163461 7_2:+85234987 Msa1084900:three_prime_UTR
TTAATTGTATATTTGCTATT+TGG 0.172257 7_2:+85228453 Msa1084900:five_prime_UTR
GCCCTCGCACTATTAAATTT+TGG 0.193492 7_2:-85231408 None:intergenic
AAGGATGACTTTAGAAGATT+TGG 0.210702 7_2:+85235681 Msa1084900:three_prime_UTR
TAATCACTTATGGTAGCTTT+TGG 0.225195 7_2:-85228164 None:intergenic
CACTCTAATTCTTGAACTTT+AGG 0.233684 7_2:-85235478 None:intergenic
GATACTTTCCTGAATAAATT+AGG 0.247966 7_2:+85230060 Msa1084900:CDS
TGCTAACACCTAATTTATTC+AGG 0.253669 7_2:-85230068 None:intergenic
AAGCTACCATAAGTGATTAT+TGG 0.255346 7_2:+85228168 Msa1084900:five_prime_UTR
AGTGACATTGATTGGCTTAT+TGG 0.258738 7_2:+85231840 Msa1084900:CDS
CAGAATTAATTCTACACATT+TGG 0.260801 7_2:-85235127 None:intergenic
GCAATATCTATGCAGGTTAT+AGG 0.262706 7_2:+85232191 Msa1084900:intron
TTTAAATTCTTTCTTCATAA+TGG 0.266444 7_2:-85232061 None:intergenic
TAAAGTCGACATTATGAAAA+AGG 0.281405 7_2:+85235406 Msa1084900:three_prime_UTR
ACTTATTTCTAGAAAGAAAC+TGG 0.284035 7_2:+85232237 Msa1084900:CDS
ATACATGTTTGGTTTGCTTC+TGG 0.285725 7_2:+85228236 Msa1084900:five_prime_UTR
ATAATATATTCTCTTGGTTA+TGG 0.286140 7_2:+85230462 Msa1084900:CDS
ACATTTATCTCGATAACTTT+TGG 0.297735 7_2:+85229890 Msa1084900:CDS
TCAAGCTATTGTTGAGTCTA+TGG 0.304822 7_2:+85229595 Msa1084900:CDS
CTGCTGTGTAAGTGATTCAT+AGG 0.311038 7_2:+85228355 Msa1084900:five_prime_UTR
TGATAGATTGATCTTTGATT+TGG 0.314068 7_2:+85235816 Msa1084900:three_prime_UTR
AATTGTTGTAGGAGTGGTTT+AGG 0.315975 7_2:+85228205 Msa1084900:five_prime_UTR
GCACAAGTTAGAATCAATTA+TGG 0.323401 7_2:-85235188 None:intergenic
ACAGAAATTGAATTGTTTAG+AGG 0.333046 7_2:+85228268 Msa1084900:five_prime_UTR
GTCTATGGAAGGTGAGAAAA+TGG 0.336276 7_2:+85229610 Msa1084900:CDS
CTACATTGAAAGGTGTTCAT+AGG 0.336704 7_2:+85229849 Msa1084900:CDS
TTTGGTCAAGCAGATGTTCT+TGG 0.337396 7_2:+85235005 Msa1084900:three_prime_UTR
AGCTACCATAAGTGATTATT+GGG 0.348370 7_2:+85228169 Msa1084900:five_prime_UTR
CAAGTAACATTCCTAAACTT+TGG 0.348603 7_2:+85235047 Msa1084900:three_prime_UTR
AGGAGCTGTGTATACATGTT+TGG 0.351208 7_2:+85228225 Msa1084900:five_prime_UTR
CAGGATATATTACCAACTTC+TGG 0.358258 7_2:-85231282 None:intergenic
TCATGAAAAGTAAGTATCTA+AGG 0.362124 7_2:+85235662 Msa1084900:three_prime_UTR
CCCATCACATTGAACAACTT+TGG 0.363703 7_2:+85231227 Msa1084900:CDS
TTGGCTTATTGGATGGGTCT+TGG 0.364550 7_2:+85231851 Msa1084900:CDS
ATCTGATGTGTTTCTTCTTG+TGG 0.368845 7_2:-85231160 None:intergenic
TATTGGATGGGTCTTGGCTC+AGG 0.379258 7_2:+85231857 Msa1084900:CDS
AGAACTGTTGATGTCTTATC+TGG 0.386030 7_2:+85234284 Msa1084900:CDS
TTACATGTTAAAATTGTTGT+AGG 0.394227 7_2:+85228194 Msa1084900:five_prime_UTR
ATCACAGGAGTGACATTGAT+TGG 0.396953 7_2:+85231832 Msa1084900:intron
AGCCTTTCTAAAGTCATTGC+CGG 0.398907 7_2:+85231037 Msa1084900:CDS
TGTATAACTTTAAAGCTTCA+AGG 0.400585 7_2:-85228763 None:intergenic
TTCTCCATGGTCATTGGGTC+TGG 0.401517 7_2:-85234924 None:intergenic
AAGTAACATTCCTAAACTTT+GGG 0.406887 7_2:+85235048 Msa1084900:three_prime_UTR
GGAACAGAAATTTGCCTTGT+GGG 0.409718 7_2:-85231502 None:intergenic
AGCTCAACTACCCAAAGTTT+AGG 0.411617 7_2:-85235058 None:intergenic
TCCAAAGTTGTTCAATGTGA+TGG 0.413856 7_2:-85231228 None:intergenic
GTTACTTGTCCGTCGATGTC+TGG 0.414111 7_2:-85235032 None:intergenic
TAACACCCAATAATCACTTA+TGG 0.414180 7_2:-85228174 None:intergenic
ATGCTTGCTGTACCACCAAC+TGG 0.416506 7_2:+85231477 Msa1084900:CDS
TGGAAATTACTATGCCTTGA+AGG 0.432083 7_2:+85228549 Msa1084900:CDS
TAATTGATTCTAACTTGTGC+TGG 0.435668 7_2:+85235191 Msa1084900:three_prime_UTR
TTGCTATTTGGATTTGATGC+AGG 0.436132 7_2:+85228465 Msa1084900:exon
TTCATTATAATATATTCTCT+TGG 0.436209 7_2:+85230456 Msa1084900:CDS
GATGTGTCTGACATACATTT+TGG 0.437370 7_2:-85235851 None:intergenic
CTTGGTTCAAAATCATCATA+AGG 0.439067 7_2:-85234734 None:intergenic
GCAGCTTTGCAACTGAGCTC+AGG 0.439257 7_2:-85234658 None:intergenic
AAAACTTCTCCATGGTCATT+GGG 0.439760 7_2:-85234929 None:intergenic
GGATTTGAAATCAAAGCTAT+AGG 0.445820 7_2:-85230010 None:intergenic
TAGATTGATCTTTGATTTGG+AGG 0.445997 7_2:+85235819 Msa1084900:three_prime_UTR
ATCACAACATTGAATATTGT+GGG 0.458572 7_2:-85234963 None:intergenic
TGCTATTTGGATTTGATGCA+GGG 0.461845 7_2:+85228466 Msa1084900:exon
GTTTCAGACTTCGGATTCCA+TGG 0.472468 7_2:-85229809 None:intergenic
TGATACAGCAGGTGCTGCTC+AGG 0.476534 7_2:+85230104 Msa1084900:CDS
AATTCATAGGTTTAAGCAGT+GGG 0.481485 7_2:+85234825 Msa1084900:intron
AGACATATAATTGCAAGGTT+AGG 0.481535 7_2:+85235713 Msa1084900:three_prime_UTR
TCACAGCGCACGGGTTGCCT+TGG 0.481689 7_2:+85232027 Msa1084900:intron
TACATTGAAAGGTGTTCATA+GGG 0.482070 7_2:+85229850 Msa1084900:CDS
GATCACAACATTGAATATTG+TGG 0.486777 7_2:-85234964 None:intergenic
CATTGATTGGCTTATTGGAT+GGG 0.486891 7_2:+85231845 Msa1084900:CDS
AATGAACGTGTACACAAATC+AGG 0.489813 7_2:+85235375 Msa1084900:three_prime_UTR
AATTGCAAGGTTAGGACTGC+TGG 0.493967 7_2:+85235721 Msa1084900:three_prime_UTR
AGCATCAGGCCCTGTGTGGA+TGG 0.495690 7_2:+85231007 Msa1084900:CDS
TGAATGTAAAGTGATATGTT+TGG 0.503494 7_2:-85235271 None:intergenic
CATCAACAGTTCTATCATTG+AGG 0.503528 7_2:-85234274 None:intergenic
CCAAAGTTGTTCAATGTGAT+GGG 0.504943 7_2:-85231227 None:intergenic
TAAAGTTATACAGTCGAGCC+TGG 0.508531 7_2:+85228774 Msa1084900:CDS
GAATGAAGGGAAAACCTTCA+AGG 0.514108 7_2:-85228563 None:intergenic
TAAAGATGAATCATCATTGA+AGG 0.515984 7_2:+85232262 Msa1084900:CDS
GGATCAGACATAATAGCATC+AGG 0.520650 7_2:+85230993 Msa1084900:intron
ACGTTCATTTAGCATGTGCT+TGG 0.521491 7_2:-85235361 None:intergenic
GCTTCTTCTCGAGTCTTCAC+AGG 0.521524 7_2:+85234417 Msa1084900:CDS
ATAATGTCGACTTTATATGT+TGG 0.527989 7_2:-85235398 None:intergenic
TACCACAAGGCAGACCTCCT+GGG 0.528966 7_2:-85230518 None:intergenic
GCCTTGTGGGATCCAGTTGG+TGG 0.529757 7_2:-85231489 None:intergenic
GTTGTGATCTTCTCTATCCA+TGG 0.530423 7_2:+85234978 Msa1084900:three_prime_UTR
AGAATTAGAGTGGTTTAGTG+AGG 0.535375 7_2:+85235489 Msa1084900:three_prime_UTR
AAAAGAGCAATCCATTGTGC+AGG 0.535750 7_2:-85229662 None:intergenic
GAAAATGTTGATGATACAGC+AGG 0.537015 7_2:+85230093 Msa1084900:CDS
TTGGACATAGTTTCAGACTT+CGG 0.539407 7_2:-85229818 None:intergenic
ACATTGATTGGCTTATTGGA+TGG 0.541072 7_2:+85231844 Msa1084900:CDS
AACCGGCAATGACTTTAGAA+AGG 0.541989 7_2:-85231039 None:intergenic
TGTTAAAATTGTTGTAGGAG+TGG 0.544738 7_2:+85228199 Msa1084900:five_prime_UTR
AAGTTCTGTTAGCCAGAAGT+TGG 0.544913 7_2:+85231270 Msa1084900:CDS
CTAAAGTTCAAGAATTAGAG+TGG 0.545919 7_2:+85235479 Msa1084900:three_prime_UTR
CTCAGTTGCAAAGCTGCAGA+TGG 0.547696 7_2:+85234664 Msa1084900:CDS
TATCTATGCAGGTTATAGGT+TGG 0.550771 7_2:+85232195 Msa1084900:intron
ATAGGGGTGATTATTCATGT+TGG 0.550825 7_2:+85228373 Msa1084900:five_prime_UTR
TCATCATAAGGAGTATCCAC+TGG 0.551333 7_2:-85234722 None:intergenic
AACCAAAATTTAATAGTGCG+AGG 0.552564 7_2:+85231406 Msa1084900:CDS
TTTCGTTGGTCACAGCGCAC+GGG 0.554146 7_2:+85232018 Msa1084900:intron
CAGCTTTGCAACTGAGCTCA+GGG 0.554908 7_2:-85234657 None:intergenic
CTTATTTCTAGAAAGAAACT+GGG 0.562750 7_2:+85232238 Msa1084900:CDS
AAGGTTAGGACTGCTGGCGA+AGG 0.562911 7_2:+85235727 Msa1084900:three_prime_UTR
AACATTATTAACATTTGCAG+AGG 0.563575 7_2:-85231523 None:intergenic
TCACAAAACAGAGAGAAAAG+TGG 0.563691 7_2:+85228717 Msa1084900:CDS
CGAGGGCAGTATACAGAGAA+CGG 0.564609 7_2:+85231424 Msa1084900:CDS
TGCTGTGTAAGTGATTCATA+GGG 0.564797 7_2:+85228356 Msa1084900:five_prime_UTR
AAGGTCATGTCTACATTGAA+AGG 0.565200 7_2:+85229839 Msa1084900:CDS
TTTCAGACTTCGGATTCCAT+GGG 0.572108 7_2:-85229808 None:intergenic
ACCAAAATTTAATAGTGCGA+GGG 0.577057 7_2:+85231407 Msa1084900:CDS
TTTCAATGTAGACATGACCT+TGG 0.582305 7_2:-85229837 None:intergenic
AGGTTATAGGTTGGTCAATG+TGG 0.584576 7_2:+85232204 Msa1084900:intron
CGTAGACCGCGACTTACAAG+AGG 0.586650 7_2:+85235792 Msa1084900:three_prime_UTR
GTGAGGTTATATTCATGCTG+AGG 0.588002 7_2:+85235506 Msa1084900:three_prime_UTR
TATAGGCTAGTGGTGACCCA+TGG 0.588816 7_2:+85229792 Msa1084900:intron
ATCAACAGTTCTATCATTGA+GGG 0.591263 7_2:-85234273 None:intergenic
AGTTGTTCAATGTGATGGGT+AGG 0.596093 7_2:-85231223 None:intergenic
AGTGGATGGGGAGATACTGC+AGG 0.599037 7_2:+85234856 Msa1084900:CDS
AGATACTGCAGGAAGAGTGA+AGG 0.602197 7_2:+85234867 Msa1084900:CDS
CTGCTTGACCAAAATAACCA+TGG 0.605295 7_2:-85234995 None:intergenic
TTGTGAGGAAAGTCTATCAG+AGG 0.607948 7_2:+85231188 Msa1084900:CDS
CTTGGCTTGCCAGACATCGA+CGG 0.607998 7_2:+85235023 Msa1084900:three_prime_UTR
AGGTTAGGACTGCTGGCGAA+GGG 0.609643 7_2:+85235728 Msa1084900:three_prime_UTR
GAAGTCTGAAACTATGTCCA+AGG 0.615623 7_2:+85229820 Msa1084900:CDS
TTTGCCTTGTGGGATCCAGT+TGG 0.616706 7_2:-85231492 None:intergenic
GCTATTGTTGAGTCTATGGA+AGG 0.617292 7_2:+85229599 Msa1084900:CDS
TAATGGCCATCGTGCTACCA+AGG 0.618127 7_2:-85232044 None:intergenic
TATCCACTGGAAGTGCTGAA+AGG 0.620301 7_2:-85234709 None:intergenic
ACACAAGACATATAATTGCA+AGG 0.621590 7_2:+85235708 Msa1084900:three_prime_UTR
AGTTCCAGACCCAATGACCA+TGG 0.624410 7_2:+85234920 Msa1084900:exon
GCTATGTACTCCATCCACAC+AGG 0.627247 7_2:-85231017 None:intergenic
AGGAACAGAAATTTGCCTTG+TGG 0.630281 7_2:-85231503 None:intergenic
CACATCAGATGACTGTTGTG+AGG 0.630283 7_2:+85231173 Msa1084900:CDS
TAATTCATAGGTTTAAGCAG+TGG 0.631942 7_2:+85234824 Msa1084900:intron
CTATGTACTCCATCCACACA+GGG 0.637483 7_2:-85231016 None:intergenic
AACAGTTCTATCATTGAGGG+AGG 0.642694 7_2:-85234270 None:intergenic
ACCACCAACTGGATCCCACA+AGG 0.642757 7_2:+85231488 Msa1084900:CDS
TAATAGCATCAGGCCCTGTG+TGG 0.645875 7_2:+85231003 Msa1084900:CDS
ATGCTGCTGAACCTGCACAA+TGG 0.650823 7_2:+85229651 Msa1084900:CDS
GCTGCAGATGGCACTAACAG+TGG 0.655252 7_2:+85234676 Msa1084900:CDS
ATTCCTTTCAGCACTTCCAG+TGG 0.655307 7_2:+85234706 Msa1084900:CDS
ACCACAAGGCAGACCTCCTG+GGG 0.657543 7_2:-85230517 None:intergenic
TATCACCCTCTTGTAAGTCG+CGG 0.658226 7_2:-85235798 None:intergenic
TGTGAGGAAAGTCTATCAGA+GGG 0.681127 7_2:+85231189 Msa1084900:CDS
ATTCATAGGTTTAAGCAGTG+GGG 0.687027 7_2:+85234826 Msa1084900:intron
ACTATAGGAATATTGCACAA+TGG 0.690152 7_2:+85234460 Msa1084900:CDS
GGGTTGCCTTGGTAGCACGA+TGG 0.694385 7_2:+85232038 Msa1084900:CDS
ATGTATGTCAGACACATCCG+CGG 0.706053 7_2:+85235856 Msa1084900:three_prime_UTR
GTAGACCGCGACTTACAAGA+GGG 0.725543 7_2:+85235793 Msa1084900:three_prime_UTR
GCTGTGTAAGTGATTCATAG+GGG 0.803078 7_2:+85228357 Msa1084900:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTTCACTTAATATA+TGG - chr7_2:85229035-85229054 None:intergenic 10.0%
!!! TTGAAATATTTTTAAACTTA+AGG + chr7_2:85233285-85233304 Msa1084900:intron 10.0%
!!! TGAAATATTTTTAAACTTAA+GGG + chr7_2:85233286-85233305 Msa1084900:intron 10.0%
!! TTTCTTTAATTATTAAGTTT+AGG + chr7_2:85233787-85233806 Msa1084900:intron 10.0%
!!! TTAATTGTATATTTGCTATT+TGG + chr7_2:85228453-85228472 Msa1084900:five_prime_UTR 15.0%
!! AAATTTATGTATACTTCTAT+AGG + chr7_2:85228676-85228695 Msa1084900:intron 15.0%
!! CATTAATAAATCAGAAAATA+TGG + chr7_2:85228884-85228903 Msa1084900:intron 15.0%
!! TTCATTATAATATATTCTCT+TGG + chr7_2:85230456-85230475 Msa1084900:CDS 15.0%
!! AACTAAAATACAAAACTAAT+AGG - chr7_2:85230724-85230743 None:intergenic 15.0%
!!! ATTAAATTTTGGTTGATATT+CGG - chr7_2:85231400-85231419 None:intergenic 15.0%
!!! TAAAATTTTAAGAACTTCAA+GGG - chr7_2:85231562-85231581 None:intergenic 15.0%
!!! TTAAAATTTTAAGAACTTCA+AGG - chr7_2:85231563-85231582 None:intergenic 15.0%
!! TAATATTACTTCAAATTACA+AGG + chr7_2:85231950-85231969 Msa1084900:intron 15.0%
!! AATATTACTTCAAATTACAA+GGG + chr7_2:85231951-85231970 Msa1084900:intron 15.0%
!! TTTAAATTCTTTCTTCATAA+TGG - chr7_2:85232064-85232083 None:intergenic 15.0%
!!! TTATTAAGTTTAGGATTTTT+TGG + chr7_2:85233796-85233815 Msa1084900:intron 15.0%
!! AAATTTATATATCAGACTAA+AGG - chr7_2:85234004-85234023 None:intergenic 15.0%
!! TTAGTCTGATATATAAATTT+AGG + chr7_2:85234004-85234023 Msa1084900:intron 15.0%
!! TTTATATTCATTTATATGCA+CGG + chr7_2:85234043-85234062 Msa1084900:intron 15.0%
!! TTAAACCTATGAATTAAAAT+AGG - chr7_2:85234820-85234839 None:intergenic 15.0%
!! TTACATGTTAAAATTGTTGT+AGG + chr7_2:85228194-85228213 Msa1084900:five_prime_UTR 20.0%
!!! AATTTTGAATTTTCAGATCT+TGG + chr7_2:85228818-85228837 Msa1084900:intron 20.0%
!! TTCACTTAATATATGGTTTA+TGG - chr7_2:85229028-85229047 None:intergenic 20.0%
!! AAGTGAAAATTTATGATGAA+TGG + chr7_2:85229041-85229060 Msa1084900:intron 20.0%
!! TAATAATTCTTGTGGATTTA+AGG - chr7_2:85229496-85229515 None:intergenic 20.0%
!!! TGCTATATGACTATTTTTAT+AGG + chr7_2:85229775-85229794 Msa1084900:intron 20.0%
!! AAAACCATATACTATAATTG+GGG - chr7_2:85230272-85230291 None:intergenic 20.0%
!! GAAAACCATATACTATAATT+GGG - chr7_2:85230273-85230292 None:intergenic 20.0%
!! AGAAAACCATATACTATAAT+TGG - chr7_2:85230274-85230293 None:intergenic 20.0%
!! CAAAAAATATTTATTTGGCT+TGG + chr7_2:85230393-85230412 Msa1084900:intron 20.0%
!! ATAATATATTCTCTTGGTTA+TGG + chr7_2:85230462-85230481 Msa1084900:CDS 20.0%
!!! TCAGTAACTTTCAATTTTTT+TGG + chr7_2:85230836-85230855 Msa1084900:intron 20.0%
!!! GTATCACTTTTCAAAATTTT+GGG + chr7_2:85231112-85231131 Msa1084900:intron 20.0%
!!! AGTTTTTTGATGAAATTGAT+TGG + chr7_2:85231451-85231470 Msa1084900:CDS 20.0%
!!! GTTCTTAAAATTTTAAGTTC+TGG + chr7_2:85231567-85231586 Msa1084900:intron 20.0%
!!! CAAAGTTAATATAGTTTGTT+AGG + chr7_2:85231713-85231732 Msa1084900:intron 20.0%
!! TGCTCAAAATAAATTAGTAT+AGG + chr7_2:85231750-85231769 Msa1084900:intron 20.0%
!!! CAAAGAATTTTGCATATAAT+AGG - chr7_2:85231889-85231908 None:intergenic 20.0%
!!! ATATTCTATTTCTTTTTCGT+TGG + chr7_2:85232004-85232023 Msa1084900:intron 20.0%
!!! GTAAATTTAGAATTGCATTA+AGG + chr7_2:85232128-85232147 Msa1084900:intron 20.0%
!! TACTAAGTAAAACTGTTAAA+AGG - chr7_2:85232834-85232853 None:intergenic 20.0%
!! AAATGAAAAGAACTCATTAT+AGG - chr7_2:85233317-85233336 None:intergenic 20.0%
!!! TTATGTAGTAATTTCGTTTT+TGG + chr7_2:85233504-85233523 Msa1084900:intron 20.0%
!! TACATTGAATTATATATGCA+AGG - chr7_2:85233533-85233552 None:intergenic 20.0%
!! GCATATATAATTCAATGTAA+AGG + chr7_2:85233534-85233553 Msa1084900:intron 20.0%
!!! ACTTGATATCAATCTTATTT+TGG + chr7_2:85233662-85233681 Msa1084900:intron 20.0%
!!! CTTGATATCAATCTTATTTT+GGG + chr7_2:85233663-85233682 Msa1084900:intron 20.0%
!! ACCAAATAAATAAACCATAT+TGG - chr7_2:85233947-85233966 None:intergenic 20.0%
!! AGGTTTATATAAAGAGAAAT+TGG - chr7_2:85233984-85234003 None:intergenic 20.0%
!! TTATATTCATTTATATGCAC+GGG + chr7_2:85234044-85234063 Msa1084900:intron 20.0%
!! TCATTTGTCTCAATATAATT+AGG + chr7_2:85234162-85234181 Msa1084900:intron 20.0%
!! AAAATTCATGTCAAAAGTTA+AGG - chr7_2:85234203-85234222 None:intergenic 20.0%
!!! ATGAATTTTGACAATTGATT+TGG + chr7_2:85234214-85234233 Msa1084900:intron 20.0%
!!! TGAATTTTGACAATTGATTT+GGG + chr7_2:85234215-85234234 Msa1084900:intron 20.0%
!! GTAACTTATGTTAAATCTTT+AGG + chr7_2:85234482-85234501 Msa1084900:intron 20.0%
!!! ATTTGAGATCATATCTTTAA+AGG + chr7_2:85234526-85234545 Msa1084900:intron 20.0%
!!! ACAATCCTATTTTAATTCAT+AGG + chr7_2:85234812-85234831 Msa1084900:intron 20.0%
!! GTTAATAAAAGTCACATATT+TGG - chr7_2:85235459-85235478 None:intergenic 20.0%
!!! GAATAGAAACTATTTCTTTA+AGG - chr7_2:85235569-85235588 None:intergenic 20.0%
!! ATGCTATATGAAATCAAAAA+TGG - chr7_2:85235617-85235636 None:intergenic 20.0%
!!! ACTTTTTTGGATATTTGATT+TGG - chr7_2:85235643-85235662 None:intergenic 20.0%
! ACAGAAATTGAATTGTTTAG+AGG + chr7_2:85228268-85228287 Msa1084900:five_prime_UTR 25.0%
!!! TTAAGCTGTTTTGAACAAAA+TGG + chr7_2:85228305-85228324 Msa1084900:five_prime_UTR 25.0%
! CAGATAAGATTAAGAATGAA+GGG - chr7_2:85228579-85228598 None:intergenic 25.0%
! ACAGATAAGATTAAGAATGA+AGG - chr7_2:85228580-85228599 None:intergenic 25.0%
!!! TGTATAACTTTAAAGCTTCA+AGG - chr7_2:85228766-85228785 None:intergenic 25.0%
!! GAAAATATGGTCTAAGTTTT+TGG + chr7_2:85228897-85228916 Msa1084900:intron 25.0%
!!! ATTTTCAAGTTTAAACCTCA+AGG - chr7_2:85229093-85229112 None:intergenic 25.0%
!! AACTCCTATATCATGAATTT+TGG - chr7_2:85229297-85229316 None:intergenic 25.0%
!! AGAAAGCATAATAATTCTTG+TGG - chr7_2:85229504-85229523 None:intergenic 25.0%
!! ACATTTATCTCGATAACTTT+TGG + chr7_2:85229890-85229909 Msa1084900:CDS 25.0%
! GATACTTTCCTGAATAAATT+AGG + chr7_2:85230060-85230079 Msa1084900:CDS 25.0%
! AAAATGTATGGAGCTAATTA+CGG - chr7_2:85230203-85230222 None:intergenic 25.0%
! AAACCATATACTATAATTGG+GGG - chr7_2:85230271-85230290 None:intergenic 25.0%
! AGCATTAGTAAATTAGTCAA+TGG - chr7_2:85230310-85230329 None:intergenic 25.0%
!!! GTTTTATTCTTCTTGCTTAT+AGG + chr7_2:85230579-85230598 Msa1084900:intron 25.0%
! TTACATTCGTTTCATTAGAA+AGG + chr7_2:85230607-85230626 Msa1084900:intron 25.0%
! TAGAAAGGTTAATGATAAGA+AGG + chr7_2:85230622-85230641 Msa1084900:intron 25.0%
! AGAAAGGTTAATGATAAGAA+GGG + chr7_2:85230623-85230642 Msa1084900:intron 25.0%
! ATACAAAACTAATAGGACAA+TGG - chr7_2:85230717-85230736 None:intergenic 25.0%
!! ACCTTTTTATGAGATGATAA+TGG + chr7_2:85230763-85230782 Msa1084900:intron 25.0%
! TCCATTATCATCTCATAAAA+AGG - chr7_2:85230767-85230786 None:intergenic 25.0%
! CATACAAAAGATTAACTAAC+CGG - chr7_2:85231059-85231078 None:intergenic 25.0%
!! GTTATGCAATTCTTATTTCT+TGG + chr7_2:85231078-85231097 Msa1084900:intron 25.0%
!! TTATTTCTTGGTGCATAATT+TGG + chr7_2:85231090-85231109 Msa1084900:intron 25.0%
!!! GGTATCACTTTTCAAAATTT+TGG + chr7_2:85231111-85231130 Msa1084900:intron 25.0%
! TGATTCTGTAGTTTCTATTA+AGG + chr7_2:85231328-85231347 Msa1084900:intron 25.0%
! AACATTATTAACATTTGCAG+AGG - chr7_2:85231526-85231545 None:intergenic 25.0%
!!! CTTAAAATTTTAAGTTCTGG+TGG + chr7_2:85231570-85231589 Msa1084900:intron 25.0%
! AATTTGCAAGTGAAAATTTC+AGG + chr7_2:85231783-85231802 Msa1084900:intron 25.0%
!!! ACTTATTTCTAGAAAGAAAC+TGG + chr7_2:85232237-85232256 Msa1084900:CDS 25.0%
!!! CTTATTTCTAGAAAGAAACT+GGG + chr7_2:85232238-85232257 Msa1084900:CDS 25.0%
! TAAAGATGAATCATCATTGA+AGG + chr7_2:85232262-85232281 Msa1084900:CDS 25.0%
!! GTAAATAAATCCAAGCATTT+TGG + chr7_2:85232284-85232303 Msa1084900:intron 25.0%
! AATCACTATGTAATAATGAC+TGG - chr7_2:85232362-85232381 None:intergenic 25.0%
!!! TTTTGTTTGAGTTGTTCTTT+TGG + chr7_2:85232408-85232427 Msa1084900:intron 25.0%
!!! ATTCTCTTTTTTGCTTTCAT+AGG + chr7_2:85232487-85232506 Msa1084900:intron 25.0%
!! AGTATTGAAAAATGTTACGT+AGG - chr7_2:85232654-85232673 None:intergenic 25.0%
! AACAACTAACATAGAAAGAT+AGG + chr7_2:85232700-85232719 Msa1084900:intron 25.0%
! ACAACTAACATAGAAAGATA+GGG + chr7_2:85232701-85232720 Msa1084900:intron 25.0%
!!! TTTCTTTTGTTTGTGAATGT+AGG + chr7_2:85232935-85232954 Msa1084900:intron 25.0%
!!! TTCTTTTGTTTGTGAATGTA+GGG + chr7_2:85232936-85232955 Msa1084900:intron 25.0%
! TATGTCTAAACATAGCTAAA+TGG + chr7_2:85233162-85233181 Msa1084900:intron 25.0%
!! AAACATAGCTAAATGGTTTT+TGG + chr7_2:85233169-85233188 Msa1084900:intron 25.0%
!! AAACCTTATAATAGCTCTTT+TGG - chr7_2:85233231-85233250 None:intergenic 25.0%
!! TATAAGGTTTTGCTTATACT+TGG + chr7_2:85233241-85233260 Msa1084900:intron 25.0%
! GTTAAAAACGAAATTCAAGT+TGG - chr7_2:85233471-85233490 None:intergenic 25.0%
!!! AGTAAGTTGTGATTAGTTTT+TGG + chr7_2:85233573-85233592 Msa1084900:intron 25.0%
!!! ATTAGTTTTTGGAAAGGAAT+TGG + chr7_2:85233584-85233603 Msa1084900:intron 25.0%
!!! TCAACTTTGTTTTTAGACTT+TGG + chr7_2:85233720-85233739 Msa1084900:intron 25.0%
! GCCAATATGGTTTATTTATT+TGG + chr7_2:85233943-85233962 Msa1084900:intron 25.0%
! AAGTCTGATATATATTGTGA+TGG + chr7_2:85234073-85234092 Msa1084900:intron 25.0%
! TCTCAATATAATTAGGTTTG+TGG + chr7_2:85234169-85234188 Msa1084900:intron 25.0%
!! ATTATGTAATCTAAGCATTG+TGG + chr7_2:85234352-85234371 Msa1084900:intron 25.0%
!! GTAATTTTGTAATGCACTTT+TGG + chr7_2:85234583-85234602 Msa1084900:intron 25.0%
! ATCACAACATTGAATATTGT+GGG - chr7_2:85234966-85234985 None:intergenic 25.0%
! AAGTAACATTCCTAAACTTT+GGG + chr7_2:85235048-85235067 Msa1084900:three_prime_UTR 25.0%
! CAGAATTAATTCTACACATT+TGG - chr7_2:85235130-85235149 None:intergenic 25.0%
! ATGCTAAAAATCAATTGTAG+AGG - chr7_2:85235232-85235251 None:intergenic 25.0%
! TGAATGTAAAGTGATATGTT+TGG - chr7_2:85235274-85235293 None:intergenic 25.0%
!!! ATAATGTCGACTTTATATGT+TGG - chr7_2:85235401-85235420 None:intergenic 25.0%
! TAAAGTCGACATTATGAAAA+AGG + chr7_2:85235406-85235425 Msa1084900:three_prime_UTR 25.0%
! AATCAAAAATGGAACTGTAA+AGG - chr7_2:85235606-85235625 None:intergenic 25.0%
!!! CTTACTTTTCATGACTTTTT+TGG - chr7_2:85235656-85235675 None:intergenic 25.0%
! TCATGAAAAGTAAGTATCTA+AGG + chr7_2:85235662-85235681 Msa1084900:three_prime_UTR 25.0%
! TGATAGATTGATCTTTGATT+TGG + chr7_2:85235816-85235835 Msa1084900:three_prime_UTR 25.0%
! AATCACTTATGGTAGCTTTT+GGG - chr7_2:85228166-85228185 None:intergenic 30.0%
! TAATCACTTATGGTAGCTTT+TGG - chr7_2:85228167-85228186 None:intergenic 30.0%
AAGCTACCATAAGTGATTAT+TGG + chr7_2:85228168-85228187 Msa1084900:five_prime_UTR 30.0%
AGCTACCATAAGTGATTATT+GGG + chr7_2:85228169-85228188 Msa1084900:five_prime_UTR 30.0%
TAACACCCAATAATCACTTA+TGG - chr7_2:85228177-85228196 None:intergenic 30.0%
TGTTAAAATTGTTGTAGGAG+TGG + chr7_2:85228199-85228218 Msa1084900:five_prime_UTR 30.0%
! CTACTTGATCAATTTTCATG+TGG + chr7_2:85228529-85228548 Msa1084900:CDS 30.0%
TATGTATACTTCTATAGGCA+AGG + chr7_2:85228681-85228700 Msa1084900:intron 30.0%
! CTCTGTTTTGTGATAGTATA+TGG - chr7_2:85228710-85228729 None:intergenic 30.0%
AAAGATTCTTCTTGCAAAAG+AGG + chr7_2:85228854-85228873 Msa1084900:intron 30.0%
ATGTTCTGTGGTGAAAATAA+AGG - chr7_2:85228925-85228944 None:intergenic 30.0%
!!! TGCTCAGAAGTTTTTTTCTA+AGG + chr7_2:85228980-85228999 Msa1084900:CDS 30.0%
!!! ATTGCTTTTTGTTCTGTTTG+TGG + chr7_2:85229175-85229194 Msa1084900:intron 30.0%
GTCACCAAAATTCATGATAT+AGG + chr7_2:85229290-85229309 Msa1084900:intron 30.0%
CTGATAGGATACTTAAAACT+TGG + chr7_2:85229454-85229473 Msa1084900:intron 30.0%
TATATGCTACCTTCAAGAAA+GGG - chr7_2:85229565-85229584 None:intergenic 30.0%
ATATATGCTACCTTCAAGAA+AGG - chr7_2:85229566-85229585 None:intergenic 30.0%
AATAGTCATATAGCATTGCA+CGG - chr7_2:85229770-85229789 None:intergenic 30.0%
!!! TGACTATTTTTATAGGCTAG+TGG + chr7_2:85229782-85229801 Msa1084900:intron 30.0%
!! TACATTGAAAGGTGTTCATA+GGG + chr7_2:85229850-85229869 Msa1084900:CDS 30.0%
! GGATTTGAAATCAAAGCTAT+AGG - chr7_2:85230013-85230032 None:intergenic 30.0%
! ATCAAGTACTGCATGAAAAA+AGG - chr7_2:85230034-85230053 None:intergenic 30.0%
TGCTAACACCTAATTTATTC+AGG - chr7_2:85230071-85230090 None:intergenic 30.0%
AGTACAGTGAACAAAATGTA+TGG - chr7_2:85230215-85230234 None:intergenic 30.0%
ATTCCCCCAATTATAGTATA+TGG + chr7_2:85230265-85230284 Msa1084900:intron 30.0%
TTATTCTTCTTGCTTATAGG+CGG + chr7_2:85230582-85230601 Msa1084900:intron 30.0%
GAAAGGTTAATGATAAGAAG+GGG + chr7_2:85230624-85230643 Msa1084900:intron 30.0%
AAAGGTTAATGATAAGAAGG+GGG + chr7_2:85230625-85230644 Msa1084900:intron 30.0%
AAGTTACTGATGACTCTATT+AGG - chr7_2:85230826-85230845 None:intergenic 30.0%
TTTGTGCTTCTTAGTTTATG+CGG + chr7_2:85230890-85230909 Msa1084900:intron 30.0%
TACACATTATCAAATCAAGC+AGG - chr7_2:85231304-85231323 None:intergenic 30.0%
ACACCTTATCATCAAAATGT+AGG - chr7_2:85231354-85231373 None:intergenic 30.0%
AACCAAAATTTAATAGTGCG+AGG + chr7_2:85231406-85231425 Msa1084900:CDS 30.0%
ACCAAAATTTAATAGTGCGA+GGG + chr7_2:85231407-85231426 Msa1084900:CDS 30.0%
TGCACTTAGTAACAACAAAA+CGG - chr7_2:85231657-85231676 None:intergenic 30.0%
TACAAAGAACAAAGAAAGAG+AGG - chr7_2:85232111-85232130 None:intergenic 30.0%
TTGCATAAATCATGTAAGCA+AGG - chr7_2:85232568-85232587 None:intergenic 30.0%
ATGGTTAATGAAGGTAAACT+AGG + chr7_2:85232726-85232745 Msa1084900:intron 30.0%
! TTAGTAGCTAGACTTTTTGT+TGG + chr7_2:85232848-85232867 Msa1084900:intron 30.0%
! TTGGAAAGAAAAGCACAATA+TGG + chr7_2:85232867-85232886 Msa1084900:intron 30.0%
!!! TTCTTGGTGCTTTTTACTAA+GGG + chr7_2:85232902-85232921 Msa1084900:intron 30.0%
GGATCTTCATACAAATAACT+GGG + chr7_2:85232967-85232986 Msa1084900:intron 30.0%
!!! TTTGTTTTTTGGATCATAGC+GGG - chr7_2:85233015-85233034 None:intergenic 30.0%
!!! CTTTGTTTTTTGGATCATAG+CGG - chr7_2:85233016-85233035 None:intergenic 30.0%
GCTATGATCCAAAAAACAAA+GGG + chr7_2:85233015-85233034 Msa1084900:intron 30.0%
CTATGATCCAAAAAACAAAG+GGG + chr7_2:85233016-85233035 Msa1084900:intron 30.0%
CTTCCAAAAGAGCTATTATA+AGG + chr7_2:85233225-85233244 Msa1084900:intron 30.0%
!!! GTTGTGATTAGTTTTTGGAA+AGG + chr7_2:85233578-85233597 Msa1084900:intron 30.0%
!!! ACTTTGTTTTTAGACTTTGG+TGG + chr7_2:85233723-85233742 Msa1084900:intron 30.0%
ACACAATAAACCAAGTAAAG+TGG + chr7_2:85233830-85233849 Msa1084900:intron 30.0%
AGAATAGAGAGAAATACAAG+TGG + chr7_2:85233916-85233935 Msa1084900:intron 30.0%
!!! TATTTCCACTTTTTACCTTG+AGG + chr7_2:85234109-85234128 Msa1084900:intron 30.0%
ATCAACAGTTCTATCATTGA+GGG - chr7_2:85234276-85234295 None:intergenic 30.0%
! GTAAGTTGACATGTTCTTAA+TGG + chr7_2:85234377-85234396 Msa1084900:intron 30.0%
!! CCTATAGTGTTTTTATCGTA+TGG - chr7_2:85234448-85234467 None:intergenic 30.0%
CCATACGATAAAAACACTAT+AGG + chr7_2:85234445-85234464 Msa1084900:CDS 30.0%
ACTATAGGAATATTGCACAA+TGG + chr7_2:85234460-85234479 Msa1084900:CDS 30.0%
GGTTCCAATAACATGTAATA+AGG + chr7_2:85234547-85234566 Msa1084900:intron 30.0%
CACTCCTTATTACATGTTAT+TGG - chr7_2:85234554-85234573 None:intergenic 30.0%
TGTCAGTTCAAATGACAAAA+AGG - chr7_2:85234617-85234636 None:intergenic 30.0%
CTTGGTTCAAAATCATCATA+AGG - chr7_2:85234737-85234756 None:intergenic 30.0%
! CTTATGATGATTTTGAACCA+AGG + chr7_2:85234735-85234754 Msa1084900:CDS 30.0%
AAGTACAAAGAGATTTACCT+TGG - chr7_2:85234755-85234774 None:intergenic 30.0%
TCTCTTTGTACTTCATAAAG+TGG + chr7_2:85234762-85234781 Msa1084900:intron 30.0%
TAATTCATAGGTTTAAGCAG+TGG + chr7_2:85234824-85234843 Msa1084900:intron 30.0%
AATTCATAGGTTTAAGCAGT+GGG + chr7_2:85234825-85234844 Msa1084900:intron 30.0%
GATCACAACATTGAATATTG+TGG - chr7_2:85234967-85234986 None:intergenic 30.0%
! TTCTCTATCCATGGTTATTT+TGG + chr7_2:85234987-85235006 Msa1084900:three_prime_UTR 30.0%
CAAGTAACATTCCTAAACTT+TGG + chr7_2:85235047-85235066 Msa1084900:three_prime_UTR 30.0%
!! GTGTTTAGTTCCATTTTTAG+AGG + chr7_2:85235090-85235109 Msa1084900:three_prime_UTR 30.0%
!! TTTAGTTCCATTTTTAGAGG+AGG + chr7_2:85235093-85235112 Msa1084900:three_prime_UTR 30.0%
!! AATTTTGCCTCCTCTAAAAA+TGG - chr7_2:85235103-85235122 None:intergenic 30.0%
GCACAAGTTAGAATCAATTA+TGG - chr7_2:85235191-85235210 None:intergenic 30.0%
! TAATTGATTCTAACTTGTGC+TGG + chr7_2:85235191-85235210 Msa1084900:three_prime_UTR 30.0%
CACTCTAATTCTTGAACTTT+AGG - chr7_2:85235481-85235500 None:intergenic 30.0%
CTAAAGTTCAAGAATTAGAG+TGG + chr7_2:85235479-85235498 Msa1084900:three_prime_UTR 30.0%
! AAGGATGACTTTAGAAGATT+TGG + chr7_2:85235681-85235700 Msa1084900:three_prime_UTR 30.0%
ACACAAGACATATAATTGCA+AGG + chr7_2:85235708-85235727 Msa1084900:three_prime_UTR 30.0%
AGACATATAATTGCAAGGTT+AGG + chr7_2:85235713-85235732 Msa1084900:three_prime_UTR 30.0%
AATGCTGAGAAAAATTTAGG+TGG + chr7_2:85235751-85235770 Msa1084900:three_prime_UTR 30.0%
AGAAAAATTTAGGTGGTGAA+TGG + chr7_2:85235758-85235777 Msa1084900:three_prime_UTR 30.0%
!! TAGATTGATCTTTGATTTGG+AGG + chr7_2:85235819-85235838 Msa1084900:three_prime_UTR 30.0%
!! TAGCTTTTGGGGATAACTTA+TGG - chr7_2:85228154-85228173 None:intergenic 35.0%
! ATCACTTATGGTAGCTTTTG+GGG - chr7_2:85228165-85228184 None:intergenic 35.0%
AATTGTTGTAGGAGTGGTTT+AGG + chr7_2:85228205-85228224 Msa1084900:five_prime_UTR 35.0%
!! ATACATGTTTGGTTTGCTTC+TGG + chr7_2:85228236-85228255 Msa1084900:five_prime_UTR 35.0%
TGCTGTGTAAGTGATTCATA+GGG + chr7_2:85228356-85228375 Msa1084900:five_prime_UTR 35.0%
ATAGGGGTGATTATTCATGT+TGG + chr7_2:85228373-85228392 Msa1084900:five_prime_UTR 35.0%
!! TTGCTATTTGGATTTGATGC+AGG + chr7_2:85228465-85228484 Msa1084900:exon 35.0%
! TGCTATTTGGATTTGATGCA+GGG + chr7_2:85228466-85228485 Msa1084900:exon 35.0%
TGGAAATTACTATGCCTTGA+AGG + chr7_2:85228549-85228568 Msa1084900:CDS 35.0%
TCACAAAACAGAGAGAAAAG+TGG + chr7_2:85228717-85228736 Msa1084900:CDS 35.0%
AATTTATGATGAATGGCCCT+TGG + chr7_2:85229048-85229067 Msa1084900:intron 35.0%
TTTGCATTTAGCATCTCCAA+GGG - chr7_2:85229067-85229086 None:intergenic 35.0%
! TGAACTTTTCCCTTTCTTGA+AGG + chr7_2:85229553-85229572 Msa1084900:intron 35.0%
TCAAGCTATTGTTGAGTCTA+TGG + chr7_2:85229595-85229614 Msa1084900:CDS 35.0%
AAGTATTCATCAGCGAAAAG+AGG + chr7_2:85229687-85229706 Msa1084900:intron 35.0%
!!! AAAAGAGGTTTTGGAGCAAA+TGG + chr7_2:85229702-85229721 Msa1084900:intron 35.0%
!!! AAAGAGGTTTTGGAGCAAAT+GGG + chr7_2:85229703-85229722 Msa1084900:intron 35.0%
ATAGTCATATAGCATTGCAC+GGG - chr7_2:85229769-85229788 None:intergenic 35.0%
TTGGACATAGTTTCAGACTT+CGG - chr7_2:85229821-85229840 None:intergenic 35.0%
TTTCAATGTAGACATGACCT+TGG - chr7_2:85229840-85229859 None:intergenic 35.0%
AAGGTCATGTCTACATTGAA+AGG + chr7_2:85229839-85229858 Msa1084900:CDS 35.0%
!! CTACATTGAAAGGTGTTCAT+AGG + chr7_2:85229849-85229868 Msa1084900:CDS 35.0%
!!! CATAGGGTTTTGAAAGCAAA+TGG + chr7_2:85229866-85229885 Msa1084900:CDS 35.0%
AACAGTTCATTCTTCAAACC+TGG - chr7_2:85229916-85229935 None:intergenic 35.0%
!! GAAAATGTTGATGATACAGC+AGG + chr7_2:85230093-85230112 Msa1084900:CDS 35.0%
TGGTAAACAACTTACCAACA+TGG - chr7_2:85230697-85230716 None:intergenic 35.0%
! ATAATGGAATCTCACCTAAG+TGG + chr7_2:85230779-85230798 Msa1084900:intron 35.0%
TAATGGAATCTCACCTAAGT+GGG + chr7_2:85230780-85230799 Msa1084900:intron 35.0%
! TTTTCCAATGATGTGCTAAC+AGG + chr7_2:85230972-85230991 Msa1084900:intron 35.0%
TTTGGGTCAATTACAATTGC+AGG + chr7_2:85231129-85231148 Msa1084900:intron 35.0%
ATCTGATGTGTTTCTTCTTG+TGG - chr7_2:85231163-85231182 None:intergenic 35.0%
CCAAAGTTGTTCAATGTGAT+GGG - chr7_2:85231230-85231249 None:intergenic 35.0%
TCCAAAGTTGTTCAATGTGA+TGG - chr7_2:85231231-85231250 None:intergenic 35.0%
CAGGATATATTACCAACTTC+TGG - chr7_2:85231285-85231304 None:intergenic 35.0%
!! AGGCCTACATTTTGATGATA+AGG + chr7_2:85231348-85231367 Msa1084900:intron 35.0%
!! TTGATGATAAGGTGTTTTGC+AGG + chr7_2:85231359-85231378 Msa1084900:intron 35.0%
!! AGTGACATTGATTGGCTTAT+TGG + chr7_2:85231840-85231859 Msa1084900:CDS 35.0%
!! ACATTGATTGGCTTATTGGA+TGG + chr7_2:85231844-85231863 Msa1084900:CDS 35.0%
!! CATTGATTGGCTTATTGGAT+GGG + chr7_2:85231845-85231864 Msa1084900:CDS 35.0%
GAGGTTTAGAGAAACATACA+GGG - chr7_2:85232092-85232111 None:intergenic 35.0%
AGAGGTTTAGAGAAACATAC+AGG - chr7_2:85232093-85232112 None:intergenic 35.0%
CAACATTGCAATATCTATGC+AGG + chr7_2:85232184-85232203 Msa1084900:intron 35.0%
GCAATATCTATGCAGGTTAT+AGG + chr7_2:85232191-85232210 Msa1084900:intron 35.0%
TATCTATGCAGGTTATAGGT+TGG + chr7_2:85232195-85232214 Msa1084900:intron 35.0%
TCATCAAAAGCCAAAATGCT+TGG - chr7_2:85232297-85232316 None:intergenic 35.0%
!! GTTGTTCTTTTGGTTGTTGA+TGG + chr7_2:85232418-85232437 Msa1084900:intron 35.0%
!! CTTTTGGTTGTTGATGGAAA+AGG + chr7_2:85232424-85232443 Msa1084900:intron 35.0%
AACATAGAAAGATAGGGACA+TGG + chr7_2:85232707-85232726 Msa1084900:intron 35.0%
!!! GTTCTTGGTGCTTTTTACTA+AGG + chr7_2:85232901-85232920 Msa1084900:intron 35.0%
TTTGTATGAAGATCCCTCAA+TGG - chr7_2:85232962-85232981 None:intergenic 35.0%
GGGATCTTCATACAAATAAC+TGG + chr7_2:85232966-85232985 Msa1084900:intron 35.0%
!!! TTGTTTTTTGGATCATAGCG+GGG - chr7_2:85233014-85233033 None:intergenic 35.0%
CGCTATGATCCAAAAAACAA+AGG + chr7_2:85233014-85233033 Msa1084900:intron 35.0%
!!! AACTTAGCCCCTTTGTTTTT+TGG - chr7_2:85233026-85233045 None:intergenic 35.0%
AAAAACAAAGGGGCTAAGTT+TGG + chr7_2:85233026-85233045 Msa1084900:intron 35.0%
TGGAAGTTAGAAAACTGTCA+TGG - chr7_2:85233211-85233230 None:intergenic 35.0%
! GATGTTGATTGTAATTGTCG+TGG + chr7_2:85233627-85233646 Msa1084900:intron 35.0%
TGATCTCTTTCCACTTTACT+TGG - chr7_2:85233843-85233862 None:intergenic 35.0%
GTGGAAAGAGATCAACAATA+TGG + chr7_2:85233849-85233868 Msa1084900:intron 35.0%
GATAACCTCAAGGTAAAAAG+TGG - chr7_2:85234117-85234136 None:intergenic 35.0%
CATCAACAGTTCTATCATTG+AGG - chr7_2:85234277-85234296 None:intergenic 35.0%
AGAACTGTTGATGTCTTATC+TGG + chr7_2:85234284-85234303 Msa1084900:CDS 35.0%
AGTTGACATGTTCTTAATGG+TGG + chr7_2:85234380-85234399 Msa1084900:intron 35.0%
ATTCATAGGTTTAAGCAGTG+GGG + chr7_2:85234826-85234845 Msa1084900:intron 35.0%
AAAACTTCTCCATGGTCATT+GGG - chr7_2:85234932-85234951 None:intergenic 35.0%
AAAAACTTCTCCATGGTCAT+TGG - chr7_2:85234933-85234952 None:intergenic 35.0%
AATGAACGTGTACACAAATC+AGG + chr7_2:85235375-85235394 Msa1084900:three_prime_UTR 35.0%
AGAATTAGAGTGGTTTAGTG+AGG + chr7_2:85235489-85235508 Msa1084900:three_prime_UTR 35.0%
GGGAATGCTGAGAAAAATTT+AGG + chr7_2:85235748-85235767 Msa1084900:three_prime_UTR 35.0%
!! TGTCTGACATACATTTTGGT+TGG - chr7_2:85235850-85235869 None:intergenic 35.0%
! GATGTGTCTGACATACATTT+TGG - chr7_2:85235854-85235873 None:intergenic 35.0%
AGGAGCTGTGTATACATGTT+TGG + chr7_2:85228225-85228244 Msa1084900:five_prime_UTR 40.0%
CTGCTGTGTAAGTGATTCAT+AGG + chr7_2:85228355-85228374 Msa1084900:five_prime_UTR 40.0%
GCTGTGTAAGTGATTCATAG+GGG + chr7_2:85228357-85228376 Msa1084900:five_prime_UTR 40.0%
TTGATGCAGGGTCAAAAAGA+AGG + chr7_2:85228478-85228497 Msa1084900:exon 40.0%
GAATGAAGGGAAAACCTTCA+AGG - chr7_2:85228566-85228585 None:intergenic 40.0%
TAAAGTTATACAGTCGAGCC+TGG + chr7_2:85228774-85228793 Msa1084900:CDS 40.0%
! AATACCTTCGATTTTTCGCC+AGG - chr7_2:85228795-85228814 None:intergenic 40.0%
! CTTTGTATCGACATGTTCTG+TGG - chr7_2:85228937-85228956 None:intergenic 40.0%
GTTTGCATTTAGCATCTCCA+AGG - chr7_2:85229068-85229087 None:intergenic 40.0%
GCTAAATGCAAACTTCCTTG+AGG + chr7_2:85229075-85229094 Msa1084900:intron 40.0%
GACTCTTGTGTGTCACAAAA+AGG + chr7_2:85229147-85229166 Msa1084900:intron 40.0%
AGGATACTTAAAACTTGGCC+TGG + chr7_2:85229459-85229478 Msa1084900:intron 40.0%
! CTTGTGGATTTAAGGCTCAA+TGG - chr7_2:85229488-85229507 None:intergenic 40.0%
GCTATTGTTGAGTCTATGGA+AGG + chr7_2:85229599-85229618 Msa1084900:CDS 40.0%
GTCTATGGAAGGTGAGAAAA+TGG + chr7_2:85229610-85229629 Msa1084900:CDS 40.0%
AAAAGAGCAATCCATTGTGC+AGG - chr7_2:85229665-85229684 None:intergenic 40.0%
! TCATCAGCGAAAAGAGGTTT+TGG + chr7_2:85229693-85229712 Msa1084900:intron 40.0%
CAGCTTCTTCAGAAAGCTTA+TGG - chr7_2:85229729-85229748 None:intergenic 40.0%
TTTCAGACTTCGGATTCCAT+GGG - chr7_2:85229811-85229830 None:intergenic 40.0%
! GAAGTCTGAAACTATGTCCA+AGG + chr7_2:85229820-85229839 Msa1084900:CDS 40.0%
! TATCTCGATAACTTTTGGCC+AGG + chr7_2:85229895-85229914 Msa1084900:CDS 40.0%
AAGCAGATTAGAATCAACGC+AGG - chr7_2:85229961-85229980 None:intergenic 40.0%
ATTCATGCCAGCAACATTTC+AGG + chr7_2:85229984-85230003 Msa1084900:intron 40.0%
GAGCTAATTACGGCACATTA+AGG - chr7_2:85230193-85230212 None:intergenic 40.0%
GGGGAATGAACTTTCATATG+TGG - chr7_2:85230252-85230271 None:intergenic 40.0%
GGTTGGAAATCTTTCGAAGT+TGG + chr7_2:85230353-85230372 Msa1084900:intron 40.0%
!! AGACTCTTTTATTTGACCCC+AGG + chr7_2:85230501-85230520 Msa1084900:CDS 40.0%
CATTGTCTGCATATACCACA+AGG - chr7_2:85230534-85230553 None:intergenic 40.0%
GAATTTATGCTCAGCCATGT+TGG + chr7_2:85230680-85230699 Msa1084900:intron 40.0%
TGATCCTGTTAGCACATCAT+TGG - chr7_2:85230979-85230998 None:intergenic 40.0%
GGATCAGACATAATAGCATC+AGG + chr7_2:85230993-85231012 Msa1084900:intron 40.0%
!! AGCCTTTCTAAAGTCATTGC+CGG + chr7_2:85231037-85231056 Msa1084900:CDS 40.0%
! AACCGGCAATGACTTTAGAA+AGG - chr7_2:85231042-85231061 None:intergenic 40.0%
TTGTGAGGAAAGTCTATCAG+AGG + chr7_2:85231188-85231207 Msa1084900:CDS 40.0%
TGTGAGGAAAGTCTATCAGA+GGG + chr7_2:85231189-85231208 Msa1084900:CDS 40.0%
!! AGTTGTTCAATGTGATGGGT+AGG - chr7_2:85231226-85231245 None:intergenic 40.0%
CCCATCACATTGAACAACTT+TGG + chr7_2:85231227-85231246 Msa1084900:CDS 40.0%
AAGTTCTGTTAGCCAGAAGT+TGG + chr7_2:85231270-85231289 Msa1084900:CDS 40.0%
! GCCCTCGCACTATTAAATTT+TGG - chr7_2:85231411-85231430 None:intergenic 40.0%
GGAACAGAAATTTGCCTTGT+GGG - chr7_2:85231505-85231524 None:intergenic 40.0%
AGGAACAGAAATTTGCCTTG+TGG - chr7_2:85231506-85231525 None:intergenic 40.0%
CACTTCTGATATGCAATCAC+AGG + chr7_2:85231817-85231836 Msa1084900:intron 40.0%
ATCACAGGAGTGACATTGAT+TGG + chr7_2:85231832-85231851 Msa1084900:intron 40.0%
GTTTAGAGAAACATACAGGG+AGG - chr7_2:85232089-85232108 None:intergenic 40.0%
!! AGGTTATAGGTTGGTCAATG+TGG + chr7_2:85232204-85232223 Msa1084900:intron 40.0%
GATAGGGACATGGTTAATGA+AGG + chr7_2:85232717-85232736 Msa1084900:intron 40.0%
ATGGAATCAGCTGTTGTTCT+TGG + chr7_2:85232886-85232905 Msa1084900:intron 40.0%
!!! TGTTTTTTGGATCATAGCGG+GGG - chr7_2:85233013-85233032 None:intergenic 40.0%
!! GGTACTATGTAACTTGCTGA+AGG + chr7_2:85233047-85233066 Msa1084900:intron 40.0%
!! TGTCGAATGAAAGAAGCATC+AGG + chr7_2:85233369-85233388 Msa1084900:intron 40.0%
TACAAGTGGAGAAGCCAATA+TGG + chr7_2:85233930-85233949 Msa1084900:intron 40.0%
CAACATGCATGATAACCTCA+AGG - chr7_2:85234127-85234146 None:intergenic 40.0%
AACAGTTCTATCATTGAGGG+AGG - chr7_2:85234273-85234292 None:intergenic 40.0%
!! TCATCATAAGGAGTATCCAC+TGG - chr7_2:85234725-85234744 None:intergenic 40.0%
GTTGTGATCTTCTCTATCCA+TGG + chr7_2:85234978-85234997 Msa1084900:three_prime_UTR 40.0%
CTGCTTGACCAAAATAACCA+TGG - chr7_2:85234998-85235017 None:intergenic 40.0%
TTTGGTCAAGCAGATGTTCT+TGG + chr7_2:85235005-85235024 Msa1084900:three_prime_UTR 40.0%
AGCTCAACTACCCAAAGTTT+AGG - chr7_2:85235061-85235080 None:intergenic 40.0%
!!! TTAGCATGTGCTTGGTTTTG+CGG - chr7_2:85235356-85235375 None:intergenic 40.0%
ACGTTCATTTAGCATGTGCT+TGG - chr7_2:85235364-85235383 None:intergenic 40.0%
GTGAGGTTATATTCATGCTG+AGG + chr7_2:85235506-85235525 Msa1084900:three_prime_UTR 40.0%
!!! CTGACATACATTTTGGTTGG+TGG - chr7_2:85235847-85235866 None:intergenic 40.0%
! TCACTGAAGCACTTGCTGAT+AGG + chr7_2:85229439-85229458 Msa1084900:intron 45.0%
! TTTAAGGCTCAATGGAGTCC+AGG - chr7_2:85229480-85229499 None:intergenic 45.0%
GTTTCAGACTTCGGATTCCA+TGG - chr7_2:85229812-85229831 None:intergenic 45.0%
! ATGCTGCTTCTATGCTCTTG+AGG + chr7_2:85230325-85230344 Msa1084900:intron 45.0%
CTTCTATGCTCTTGAGGTCA+CGG + chr7_2:85230331-85230350 Msa1084900:intron 45.0%
TTCTATGCTCTTGAGGTCAC+GGG + chr7_2:85230332-85230351 Msa1084900:intron 45.0%
!! CTCTTTTATTTGACCCCAGG+AGG + chr7_2:85230504-85230523 Msa1084900:CDS 45.0%
TAATGATAAGAAGGGGGCAG+AGG + chr7_2:85230631-85230650 Msa1084900:intron 45.0%
AATGATAAGAAGGGGGCAGA+GGG + chr7_2:85230632-85230651 Msa1084900:intron 45.0%
! GAATCTCACCTAAGTGGGTT+CGG + chr7_2:85230785-85230804 Msa1084900:intron 45.0%
CTATGTACTCCATCCACACA+GGG - chr7_2:85231019-85231038 None:intergenic 45.0%
CACATCAGATGACTGTTGTG+AGG + chr7_2:85231173-85231192 Msa1084900:CDS 45.0%
!! TAAGGTGTTTTGCAGGCTAG+AGG + chr7_2:85231366-85231385 Msa1084900:intron 45.0%
!! AAGGTGTTTTGCAGGCTAGA+GGG + chr7_2:85231367-85231386 Msa1084900:intron 45.0%
TTGGCTTATTGGATGGGTCT+TGG + chr7_2:85231851-85231870 Msa1084900:CDS 45.0%
TTGTGAATGTAGGGCCATTG+AGG + chr7_2:85232945-85232964 Msa1084900:intron 45.0%
TGTGAATGTAGGGCCATTGA+GGG + chr7_2:85232946-85232965 Msa1084900:intron 45.0%
TTGCTGAAGGCTTCACTCAT+CGG + chr7_2:85233060-85233079 Msa1084900:intron 45.0%
AAGTTGGAAGACAGCAGTGA+AGG - chr7_2:85233455-85233474 None:intergenic 45.0%
GGTTAAGTGTGTGAAGACTC+TGG + chr7_2:85234236-85234255 Msa1084900:intron 45.0%
ATTCCTTTCAGCACTTCCAG+TGG + chr7_2:85234706-85234725 Msa1084900:CDS 45.0%
!! TATCCACTGGAAGTGCTGAA+AGG - chr7_2:85234712-85234731 None:intergenic 45.0%
!!! AAGCAGTGGGGTTTTGAAAG+TGG + chr7_2:85234838-85234857 Msa1084900:CDS 45.0%
!!! AGTGGGGTTTTGAAAGTGGA+TGG + chr7_2:85234842-85234861 Msa1084900:CDS 45.0%
!!! GTGGGGTTTTGAAAGTGGAT+GGG + chr7_2:85234843-85234862 Msa1084900:CDS 45.0%
!!! TGGGGTTTTGAAAGTGGATG+GGG + chr7_2:85234844-85234863 Msa1084900:CDS 45.0%
AGATACTGCAGGAAGAGTGA+AGG + chr7_2:85234867-85234886 Msa1084900:CDS 45.0%
CCTGCTGAAAAACTTCTCCA+TGG - chr7_2:85234940-85234959 None:intergenic 45.0%
!! CCATGGAGAAGTTTTTCAGC+AGG + chr7_2:85234937-85234956 Msa1084900:three_prime_UTR 45.0%
AATTGCAAGGTTAGGACTGC+TGG + chr7_2:85235721-85235740 Msa1084900:three_prime_UTR 45.0%
TATCACCCTCTTGTAAGTCG+CGG - chr7_2:85235801-85235820 None:intergenic 45.0%
ATGTATGTCAGACACATCCG+CGG + chr7_2:85235856-85235875 Msa1084900:three_prime_UTR 45.0%
!! TATATCAAAAAATATTTATT+TGG + chr7_2:85230388-85230407 Msa1084900:intron 5.0%
ATGCTGCTGAACCTGCACAA+TGG + chr7_2:85229651-85229670 Msa1084900:CDS 50.0%
TCATATAGCATTGCACGGGC+TGG - chr7_2:85229765-85229784 None:intergenic 50.0%
TATAGGCTAGTGGTGACCCA+TGG + chr7_2:85229792-85229811 Msa1084900:intron 50.0%
TAGGACGCCTGAAATGTTGC+TGG - chr7_2:85229994-85230013 None:intergenic 50.0%
TCACATGACCGAACCCACTT+AGG - chr7_2:85230796-85230815 None:intergenic 50.0%
TAATAGCATCAGGCCCTGTG+TGG + chr7_2:85231003-85231022 Msa1084900:CDS 50.0%
GCTATGTACTCCATCCACAC+AGG - chr7_2:85231020-85231039 None:intergenic 50.0%
CGAGGGCAGTATACAGAGAA+CGG + chr7_2:85231424-85231443 Msa1084900:CDS 50.0%
!! ATGCTTGCTGTACCACCAAC+TGG + chr7_2:85231477-85231496 Msa1084900:CDS 50.0%
TTTGCCTTGTGGGATCCAGT+TGG - chr7_2:85231495-85231514 None:intergenic 50.0%
TATTGGATGGGTCTTGGCTC+AGG + chr7_2:85231857-85231876 Msa1084900:CDS 50.0%
! TTTTCGTTGGTCACAGCGCA+CGG + chr7_2:85232017-85232036 Msa1084900:intron 50.0%
TAATGGCCATCGTGCTACCA+AGG - chr7_2:85232047-85232066 None:intergenic 50.0%
GCTTCTTCTCGAGTCTTCAC+AGG + chr7_2:85234417-85234436 Msa1084900:CDS 50.0%
CAGCTTTGCAACTGAGCTCA+GGG - chr7_2:85234660-85234679 None:intergenic 50.0%
CTCAGTTGCAAAGCTGCAGA+TGG + chr7_2:85234664-85234683 Msa1084900:CDS 50.0%
AGTTCCAGACCCAATGACCA+TGG + chr7_2:85234920-85234939 Msa1084900:exon 50.0%
TTCTCCATGGTCATTGGGTC+TGG - chr7_2:85234927-85234946 None:intergenic 50.0%
GTTACTTGTCCGTCGATGTC+TGG - chr7_2:85235035-85235054 None:intergenic 50.0%
GTAGACCGCGACTTACAAGA+GGG + chr7_2:85235793-85235812 Msa1084900:three_prime_UTR 50.0%
CGAGCCTGGCGAAAAATCGA+AGG + chr7_2:85228788-85228807 Msa1084900:CDS 55.0%
!! TGATACAGCAGGTGCTGCTC+AGG + chr7_2:85230104-85230123 Msa1084900:CDS 55.0%
ATGCTCTTGAGGTCACGGGT+TGG + chr7_2:85230336-85230355 Msa1084900:intron 55.0%
TACCACAAGGCAGACCTCCT+GGG - chr7_2:85230521-85230540 None:intergenic 55.0%
ATACCACAAGGCAGACCTCC+TGG - chr7_2:85230522-85230541 None:intergenic 55.0%
ACCACCAACTGGATCCCACA+AGG + chr7_2:85231488-85231507 Msa1084900:CDS 55.0%
TTTCGTTGGTCACAGCGCAC+GGG + chr7_2:85232018-85232037 Msa1084900:intron 55.0%
GCAGCTTTGCAACTGAGCTC+AGG - chr7_2:85234661-85234680 None:intergenic 55.0%
GCTGCAGATGGCACTAACAG+TGG + chr7_2:85234676-85234695 Msa1084900:CDS 55.0%
AGTGGATGGGGAGATACTGC+AGG + chr7_2:85234856-85234875 Msa1084900:CDS 55.0%
!! CTTGGCTTGCCAGACATCGA+CGG + chr7_2:85235023-85235042 Msa1084900:three_prime_UTR 55.0%
AAGGTTAGGACTGCTGGCGA+AGG + chr7_2:85235727-85235746 Msa1084900:three_prime_UTR 55.0%
AGGTTAGGACTGCTGGCGAA+GGG + chr7_2:85235728-85235747 Msa1084900:three_prime_UTR 55.0%
CGTAGACCGCGACTTACAAG+AGG + chr7_2:85235792-85235811 Msa1084900:three_prime_UTR 55.0%
ACCACAAGGCAGACCTCCTG+GGG - chr7_2:85230520-85230539 None:intergenic 60.0%
AGCATCAGGCCCTGTGTGGA+TGG + chr7_2:85231007-85231026 Msa1084900:CDS 60.0%
GCCTTGTGGGATCCAGTTGG+TGG - chr7_2:85231492-85231511 None:intergenic 60.0%
GGATGGGTCTTGGCTCAGGT+AGG + chr7_2:85231861-85231880 Msa1084900:intron 60.0%
! GGGTTGCCTTGGTAGCACGA+TGG + chr7_2:85232038-85232057 Msa1084900:CDS 60.0%
ACCCCAGGAGGTCTGCCTTG+TGG + chr7_2:85230516-85230535 Msa1084900:intron 65.0%
! TCACAGCGCACGGGTTGCCT+TGG + chr7_2:85232027-85232046 Msa1084900:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 85228146 85235886 85228146 ID=Msa1084900;Name=Msa1084900
chr7_2 mRNA 85228146 85235886 85228146 ID=Msa1084900-mRNA-1;Parent=Msa1084900;Name=Msa1084900-mRNA-1;_AED=0.23;_eAED=0.25;_QI=335|0.41|0.55|0.94|0.88|0.94|18|950|537
chr7_2 exon 85228146 85228570 85228146 ID=Msa1084900-mRNA-1:exon:22979;Parent=Msa1084900-mRNA-1
chr7_2 exon 85228698 85228809 85228698 ID=Msa1084900-mRNA-1:exon:22980;Parent=Msa1084900-mRNA-1
chr7_2 exon 85228940 85229001 85228940 ID=Msa1084900-mRNA-1:exon:22981;Parent=Msa1084900-mRNA-1
chr7_2 exon 85229575 85229688 85229575 ID=Msa1084900-mRNA-1:exon:22982;Parent=Msa1084900-mRNA-1
chr7_2 exon 85229797 85229916 85229797 ID=Msa1084900-mRNA-1:exon:22983;Parent=Msa1084900-mRNA-1
chr7_2 exon 85230006 85230125 85230006 ID=Msa1084900-mRNA-1:exon:22984;Parent=Msa1084900-mRNA-1
chr7_2 exon 85230450 85230525 85230450 ID=Msa1084900-mRNA-1:exon:22985;Parent=Msa1084900-mRNA-1
chr7_2 exon 85230994 85231058 85230994 ID=Msa1084900-mRNA-1:exon:22986;Parent=Msa1084900-mRNA-1
chr7_2 exon 85231151 85231291 85231151 ID=Msa1084900-mRNA-1:exon:22987;Parent=Msa1084900-mRNA-1
chr7_2 exon 85231381 85231553 85231381 ID=Msa1084900-mRNA-1:exon:22988;Parent=Msa1084900-mRNA-1
chr7_2 exon 85231839 85231878 85231839 ID=Msa1084900-mRNA-1:exon:22989;Parent=Msa1084900-mRNA-1
chr7_2 exon 85232033 85232092 85232033 ID=Msa1084900-mRNA-1:exon:22990;Parent=Msa1084900-mRNA-1
chr7_2 exon 85232206 85232283 85232206 ID=Msa1084900-mRNA-1:exon:22991;Parent=Msa1084900-mRNA-1
chr7_2 exon 85234252 85234305 85234252 ID=Msa1084900-mRNA-1:exon:22992;Parent=Msa1084900-mRNA-1
chr7_2 exon 85234409 85234481 85234409 ID=Msa1084900-mRNA-1:exon:22993;Parent=Msa1084900-mRNA-1
chr7_2 exon 85234569 85234582 85234569 ID=Msa1084900-mRNA-1:exon:22994;Parent=Msa1084900-mRNA-1
chr7_2 exon 85234638 85234756 85234638 ID=Msa1084900-mRNA-1:exon:22995;Parent=Msa1084900-mRNA-1
chr7_2 exon 85234834 85235886 85234834 ID=Msa1084900-mRNA-1:exon:22996;Parent=Msa1084900-mRNA-1
chr7_2 five_prime_UTR 85228146 85228480 85228146 ID=Msa1084900-mRNA-1:five_prime_utr;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85228481 85228570 85228481 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85228698 85228809 85228698 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85228940 85229001 85228940 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85229575 85229688 85229575 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85229797 85229916 85229797 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85230006 85230125 85230006 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85230450 85230525 85230450 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85230994 85231058 85230994 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85231151 85231291 85231151 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85231381 85231553 85231381 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85231839 85231878 85231839 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85232033 85232092 85232033 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85232206 85232283 85232206 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85234252 85234305 85234252 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85234409 85234481 85234409 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85234569 85234582 85234569 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85234638 85234756 85234638 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 CDS 85234834 85234936 85234834 ID=Msa1084900-mRNA-1:cds;Parent=Msa1084900-mRNA-1
chr7_2 three_prime_UTR 85234937 85235886 85234937 ID=Msa1084900-mRNA-1:three_prime_utr;Parent=Msa1084900-mRNA-1
Gene Sequence

>Msa1084900

ATGCAGGGTCAAAAAGAAGGAATGCATTTTGTTGTACATGTACAAAAACTACTTGATCAATTTTCATGTGGAAATTACTATGCCTTGAAGGCAAGGAAACCATATACTATCACAAAACAGAGAGAAAAGTGGACAAATGAAGAACATAAGACGTTCCTTGAAGCTTTAAAGTTATACAGTCGAGCCTGGCGAAAAATCGAAGAACATGTCGATACAAAGACTGCTGTGCAGATTCGAAGTCGTGCTCAGAAGTTTTTTTCTAAGGTAGCATATATTTTTACAAATCAAGCTATTGTTGAGTCTATGGAAGGTGAGAAAATGGTTCATATAATTGATCTTAATGCTGCTGAACCTGCACAATGGATTGCTCTTTTACAAGCTAGTGGTGACCCATGGAATCCGAAGTCTGAAACTATGTCCAAGGTCATGTCTACATTGAAAGGTGTTCATAGGGTTTTGAAAGCAAATGGCACATTTATCTCGATAACTTTTGGCCAGGCGTCCTATAGCTTTGATTTCAAATCCTTTTTTCATGCAGTACTTGATTTAAGCGATACTTTCCTGAATAAATTAGGTGTTAGCAGAGAAAATGTTGATGATACAGCAGGTGCTGCTCAGATCTTTTTCATTATAATATATTCTCTTGGTTATGGAAAGTATCTTCATAGAAGACTCTTTTATTTGACCCCAGGAGGATCAGACATAATAGCATCAGGCCCTGTGTGGATGGAGTACATAGCCTTTCTAAAGTCATTGCCGGCTGCACATCCACAAGAAGAAACACATCAGATGACTGTTGTGAGGAAAGTCTATCAGAGGGCTATTATTACTCCTACCCATCACATTGAACAACTTTGGAAAGACTATGATAGTTTTGAAAGTTCTGTTAGCCAGAAGTTGGCTAGAGGGCTTATATCCGAATATCAACCAAAATTTAATAGTGCGAGGGCAGTATACAGAGAACGGAAGAAGTTTTTTGATGAAATTGATTGGAATATGCTTGCTGTACCACCAACTGGATCCCACAAGGCAAATTTCTGTTCCTCTGCAAATGTTAATAATGTTGTGATCTTGAGTGACATTGATTGGCTTATTGGATGGGTCTTGGCTCAGCGCACGGGTTGCCTTGGTAGCACGATGGCCATTATGAAGAAAGAATTTAAATACCTCCCTGTTATAGGTTGGTCAATGTGGTTTGCTGAATACTTATTTCTAGAAAGAAACTGGGCTAAAGATGAATCATCATTGAAGACTCTGGAAAAGCTCAGACCTCCCTCAATGATAGAACTGTTGATGTCTTATCTGCTACTACAGCTTCTTCTCGAGTCTTCACAGGAGAAGCCATACGATAAAAACACTATAGGAATATTGCACAATGGAGTGCACACACATAGTCTAATGATAAATGATACCCTGAGCTCAGTTGCAAAGCTGCAGATGGCACTAACAGTGGCTGATGCATTCCTTTCAGCACTTCCAGTGGATACTCCTTATGATGATTTTGAACCAAGGTTTAAGCAGTGGGGTTTTGAAAGTGGATGGGGAGATACTGCAGGAAGAGTGAAGGATACAATGAGAACTTTGTTAGAAGTACTCAAGTTCCAGACCCAATGA
Protein sequence

>Msa1084900

MQGQKEGMHFVVHVQKLLDQFSCGNYYALKARKPYTITKQREKWTNEEHKTFLEALKLYSRAWRKIEEHVDTKTAVQIRSRAQKFFSKVAYIFTNQAIVESMEGEKMVHIIDLNAAEPAQWIALLQASGDPWNPKSETMSKVMSTLKGVHRVLKANGTFISITFGQASYSFDFKSFFHAVLDLSDTFLNKLGVSRENVDDTAGAAQIFFIIIYSLGYGKYLHRRLFYLTPGGSDIIASGPVWMEYIAFLKSLPAAHPQEETHQMTVVRKVYQRAIITPTHHIEQLWKDYDSFESSVSQKLARGLISEYQPKFNSARAVYRERKKFFDEIDWNMLAVPPTGSHKANFCSSANVNNVVILSDIDWLIGWVLAQRTGCLGSTMAIMKKEFKYLPVIGWSMWFAEYLFLERNWAKDESSLKTLEKLRPPSMIELLMSYLLLQLLLESSQEKPYDKNTIGILHNGVHTHSLMINDTLSSVAKLQMALTVADAFLSALPVDTPYDDFEPRFKQWGFESGWGDTAGRVKDTMRTLLEVLKFQTQ*