Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927290 | XP_013465233.1 | 74.138 | 116 | 9 | 2 | 58 | 153 | 107 | 221 | 7.03e-46 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0927290 | 0.830710 | 2.519057e-55 | -8.615850e-47 |
| Msa0014710 | Msa0927290 | 0.821184 | 4.620553e-53 | -8.615850e-47 |
| Msa0015390 | Msa0927290 | 0.802667 | 5.031633e-49 | -8.615850e-47 |
| Msa0017070 | Msa0927290 | 0.802968 | 4.360951e-49 | -8.615850e-47 |
| Msa0017510 | Msa0927290 | 0.804547 | 2.050218e-49 | -8.615850e-47 |
| Msa0031340 | Msa0927290 | 0.819314 | 1.239811e-52 | -8.615850e-47 |
| Msa0036140 | Msa0927290 | 0.817305 | 3.532556e-52 | -8.615850e-47 |
| Msa0036920 | Msa0927290 | 0.816728 | 4.762123e-52 | -8.615850e-47 |
| Msa0039330 | Msa0927290 | 0.826165 | 3.150553e-54 | -8.615850e-47 |
| Msa0045790 | Msa0927290 | 0.817642 | 2.965951e-52 | -8.615850e-47 |
| Msa0046160 | Msa0927290 | 0.814558 | 1.449293e-51 | -8.615850e-47 |
| Msa0064970 | Msa0927290 | 0.824737 | 6.862335e-54 | -8.615850e-47 |
| Msa0086760 | Msa0927290 | 0.805771 | 1.136686e-49 | -8.615850e-47 |
| Msa0095560 | Msa0927290 | 0.820639 | 6.168291e-53 | -8.615850e-47 |
| Msa0096450 | Msa0927290 | 0.806510 | 7.944080e-50 | -8.615850e-47 |
| Msa0109900 | Msa0927290 | 0.808148 | 3.571354e-50 | -8.615850e-47 |
| Msa0112750 | Msa0927290 | 0.808232 | 3.427434e-50 | -8.615850e-47 |
| Msa0119960 | Msa0927290 | 0.815301 | 9.914829e-52 | -8.615850e-47 |
| Msa0606960 | Msa0927290 | 0.810367 | 1.193970e-50 | -8.615850e-47 |
| Msa0612930 | Msa0927290 | 0.818000 | 2.462757e-52 | -8.615850e-47 |
| Msa0616160 | Msa0927290 | 0.825730 | 3.996799e-54 | -8.615850e-47 |
| Msa0616700 | Msa0927290 | 0.802752 | 4.833326e-49 | -8.615850e-47 |
| Msa0617360 | Msa0927290 | 0.801858 | 7.382240e-49 | -8.615850e-47 |
| Msa0626090 | Msa0927290 | 0.843391 | 1.441948e-58 | -8.615850e-47 |
| Msa0638930 | Msa0927290 | -0.817837 | 2.680751e-52 | -8.615850e-47 |
| Msa0653510 | Msa0927290 | 0.813852 | 2.074815e-51 | -8.615850e-47 |
| Msa0657970 | Msa0927290 | 0.843514 | 1.337147e-58 | -8.615850e-47 |
| Msa0663240 | Msa0927290 | 0.801459 | 8.915469e-49 | -8.615850e-47 |
| Msa0663810 | Msa0927290 | 0.802293 | 6.009749e-49 | -8.615850e-47 |
| Msa0664950 | Msa0927290 | 0.817198 | 3.733560e-52 | -8.615850e-47 |
| Msa0670030 | Msa0927290 | 0.800012 | 1.759954e-48 | -8.615850e-47 |
| Msa0673460 | Msa0927290 | 0.812807 | 3.520906e-51 | -8.615850e-47 |
| Msa0681250 | Msa0927290 | 0.805112 | 1.562337e-49 | -8.615850e-47 |
| Msa0681270 | Msa0927290 | 0.814112 | 1.818935e-51 | -8.615850e-47 |
| Msa0685750 | Msa0927290 | 0.804307 | 2.300381e-49 | -8.615850e-47 |
| Msa0687070 | Msa0927290 | 0.805654 | 1.202506e-49 | -8.615850e-47 |
| Msa0688070 | Msa0927290 | 0.819691 | 1.016697e-52 | -8.615850e-47 |
| Msa0688270 | Msa0927290 | 0.811060 | 8.457406e-51 | -8.615850e-47 |
| Msa0688480 | Msa0927290 | 0.808224 | 3.440130e-50 | -8.615850e-47 |
| Msa0689800 | Msa0927290 | 0.814063 | 1.864157e-51 | -8.615850e-47 |
| Msa0693380 | Msa0927290 | 0.825836 | 3.771182e-54 | -8.615850e-47 |
| Msa0695430 | Msa0927290 | 0.849128 | 3.945398e-60 | -8.615850e-47 |
| Msa0696640 | Msa0927290 | 0.818803 | 1.619507e-52 | -8.615850e-47 |
| Msa0697060 | Msa0927290 | 0.807373 | 5.218658e-50 | -8.615850e-47 |
| Msa0708910 | Msa0927290 | 0.803131 | 4.035314e-49 | -8.615850e-47 |
| Msa0716530 | Msa0927290 | 0.838056 | 3.607398e-57 | -8.615850e-47 |
| Msa0724210 | Msa0927290 | 0.827090 | 1.895543e-54 | -8.615850e-47 |
| Msa0731940 | Msa0927290 | 0.805518 | 1.284368e-49 | -8.615850e-47 |
| Msa0741570 | Msa0927290 | 0.809251 | 2.075174e-50 | -8.615850e-47 |
| Msa0744040 | Msa0927290 | 0.813701 | 2.240869e-51 | -8.615850e-47 |
| Msa0753720 | Msa0927290 | 0.832037 | 1.187718e-55 | -8.615850e-47 |
| Msa0758500 | Msa0927290 | 0.830225 | 3.310341e-55 | -8.615850e-47 |
| Msa0760130 | Msa0927290 | 0.840534 | 8.204608e-58 | -8.615850e-47 |
| Msa0766630 | Msa0927290 | 0.846255 | 2.436598e-59 | -8.615850e-47 |
| Msa0789250 | Msa0927290 | 0.801402 | 9.156317e-49 | -8.615850e-47 |
| Msa0790510 | Msa0927290 | 0.824139 | 9.489327e-54 | -8.615850e-47 |
| Msa0796700 | Msa0927290 | 0.828447 | 8.944541e-55 | -8.615850e-47 |
| Msa0806090 | Msa0927290 | 0.815230 | 1.028279e-51 | -8.615850e-47 |
| Msa0806230 | Msa0927290 | 0.813614 | 2.341039e-51 | -8.615850e-47 |
| Msa0806260 | Msa0927290 | 0.849434 | 3.241834e-60 | -8.615850e-47 |
| Msa0806270 | Msa0927290 | 0.837087 | 6.393346e-57 | -8.615850e-47 |
| Msa0806280 | Msa0927290 | 0.851493 | 8.561450e-61 | -8.615850e-47 |
| Msa0806660 | Msa0927290 | 0.801548 | 8.547467e-49 | -8.615850e-47 |
| Msa0807030 | Msa0927290 | 0.809428 | 1.901549e-50 | -8.615850e-47 |
| Msa0810220 | Msa0927290 | 0.826964 | 2.032101e-54 | -8.615850e-47 |
| Msa0813400 | Msa0927290 | 0.819747 | 9.875208e-53 | -8.615850e-47 |
| Msa0820850 | Msa0927290 | 0.835742 | 1.405251e-56 | -8.615850e-47 |
| Msa0822650 | Msa0927290 | 0.821822 | 3.291087e-53 | -8.615850e-47 |
| Msa0828540 | Msa0927290 | 0.816632 | 5.002472e-52 | -8.615850e-47 |
| Msa0828850 | Msa0927290 | 0.822966 | 1.784783e-53 | -8.615850e-47 |
| Msa0832340 | Msa0927290 | 0.813088 | 3.054748e-51 | -8.615850e-47 |
| Msa0121380 | Msa0927290 | 0.810366 | 1.194782e-50 | -8.615850e-47 |
| Msa0122590 | Msa0927290 | 0.817208 | 3.714144e-52 | -8.615850e-47 |
| Msa0123300 | Msa0927290 | 0.819756 | 9.825965e-53 | -8.615850e-47 |
| Msa0130970 | Msa0927290 | 0.809426 | 1.903463e-50 | -8.615850e-47 |
| Msa0131770 | Msa0927290 | 0.805632 | 1.215545e-49 | -8.615850e-47 |
| Msa0140860 | Msa0927290 | 0.808444 | 3.088485e-50 | -8.615850e-47 |
| Msa0142220 | Msa0927290 | 0.819866 | 9.276179e-53 | -8.615850e-47 |
| Msa0153910 | Msa0927290 | 0.805014 | 1.637773e-49 | -8.615850e-47 |
| Msa0157290 | Msa0927290 | 0.803860 | 2.848892e-49 | -8.615850e-47 |
| Msa0166870 | Msa0927290 | 0.822374 | 2.451763e-53 | -8.615850e-47 |
| Msa0178930 | Msa0927290 | 0.823739 | 1.177755e-53 | -8.615850e-47 |
| Msa0188830 | Msa0927290 | 0.823887 | 1.087236e-53 | -8.615850e-47 |
| Msa0201070 | Msa0927290 | 0.825324 | 4.986900e-54 | -8.615850e-47 |
| Msa0210450 | Msa0927290 | 0.840539 | 8.184379e-58 | -8.615850e-47 |
| Msa0211110 | Msa0927290 | 0.808862 | 2.514507e-50 | -8.615850e-47 |
| Msa0212990 | Msa0927290 | 0.800422 | 1.451821e-48 | -8.615850e-47 |
| Msa0213520 | Msa0927290 | 0.813764 | 2.169562e-51 | -8.615850e-47 |
| Msa0216910 | Msa0927290 | 0.801675 | 8.051785e-49 | -8.615850e-47 |
| Msa0218240 | Msa0927290 | 0.820670 | 6.068219e-53 | -8.615850e-47 |
| Msa0220580 | Msa0927290 | 0.872189 | 3.849427e-67 | -8.615850e-47 |
| Msa0220740 | Msa0927290 | 0.809616 | 1.732634e-50 | -8.615850e-47 |
| Msa0225520 | Msa0927290 | 0.813819 | 2.110657e-51 | -8.615850e-47 |
| Msa0231000 | Msa0927290 | 0.804869 | 1.755819e-49 | -8.615850e-47 |
| Msa0233080 | Msa0927290 | 0.811523 | 6.709914e-51 | -8.615850e-47 |
| Msa0233300 | Msa0927290 | 0.815257 | 1.014203e-51 | -8.615850e-47 |
| Msa0237660 | Msa0927290 | 0.819447 | 1.155813e-52 | -8.615850e-47 |
| Msa0375630 | Msa0927290 | 0.816703 | 4.823513e-52 | -8.615850e-47 |
| Msa0376590 | Msa0927290 | 0.829389 | 5.291090e-55 | -8.615850e-47 |
| Msa0379640 | Msa0927290 | 0.819970 | 8.780653e-53 | -8.615850e-47 |
| Msa0388950 | Msa0927290 | 0.804289 | 2.319812e-49 | -8.615850e-47 |
| Msa0389320 | Msa0927290 | 0.814105 | 1.825007e-51 | -8.615850e-47 |
| Msa0389340 | Msa0927290 | 0.804437 | 2.160830e-49 | -8.615850e-47 |
| Msa0392400 | Msa0927290 | 0.803334 | 3.663858e-49 | -8.615850e-47 |
| Msa0397750 | Msa0927290 | 0.803993 | 2.674334e-49 | -8.615850e-47 |
| Msa0397780 | Msa0927290 | 0.805175 | 1.515415e-49 | -8.615850e-47 |
| Msa0399300 | Msa0927290 | 0.803509 | 3.369246e-49 | -8.615850e-47 |
| Msa0402290 | Msa0927290 | 0.813420 | 2.583441e-51 | -8.615850e-47 |
| Msa0432300 | Msa0927290 | 0.810833 | 9.471101e-51 | -8.615850e-47 |
| Msa0436370 | Msa0927290 | 0.828069 | 1.103323e-54 | -8.615850e-47 |
| Msa0439970 | Msa0927290 | 0.800260 | 1.566965e-48 | -8.615850e-47 |
| Msa0440520 | Msa0927290 | 0.814689 | 1.355309e-51 | -8.615850e-47 |
| Msa0440750 | Msa0927290 | 0.809415 | 1.914251e-50 | -8.615850e-47 |
| Msa0443260 | Msa0927290 | 0.826612 | 2.465786e-54 | -8.615850e-47 |
| Msa0455900 | Msa0927290 | 0.818160 | 2.266128e-52 | -8.615850e-47 |
| Msa0469940 | Msa0927290 | -0.804779 | 1.834162e-49 | -8.615850e-47 |
| Msa0475490 | Msa0927290 | 0.805406 | 1.355947e-49 | -8.615850e-47 |
| Msa0242430 | Msa0927290 | 0.826266 | 2.981798e-54 | -8.615850e-47 |
| Msa0243710 | Msa0927290 | 0.825370 | 4.864026e-54 | -8.615850e-47 |
| Msa0249560 | Msa0927290 | 0.804327 | 2.278818e-49 | -8.615850e-47 |
| Msa0251320 | Msa0927290 | 0.808218 | 3.449641e-50 | -8.615850e-47 |
| Msa0258760 | Msa0927290 | 0.823656 | 1.231373e-53 | -8.615850e-47 |
| Msa0266720 | Msa0927290 | 0.819928 | 8.977064e-53 | -8.615850e-47 |
| Msa0270100 | Msa0927290 | 0.817173 | 3.783060e-52 | -8.615850e-47 |
| Msa0270520 | Msa0927290 | 0.804787 | 1.827115e-49 | -8.615850e-47 |
| Msa0271110 | Msa0927290 | 0.828657 | 7.960450e-55 | -8.615850e-47 |
| Msa0273100 | Msa0927290 | 0.821909 | 3.142055e-53 | -8.615850e-47 |
| Msa0274730 | Msa0927290 | 0.800561 | 1.360389e-48 | -8.615850e-47 |
| Msa0279160 | Msa0927290 | 0.820611 | 6.258451e-53 | -8.615850e-47 |
| Msa0281030 | Msa0927290 | 0.800921 | 1.148595e-48 | -8.615850e-47 |
| Msa0285450 | Msa0927290 | 0.822647 | 2.117982e-53 | -8.615850e-47 |
| Msa0288100 | Msa0927290 | 0.804967 | 1.675053e-49 | -8.615850e-47 |
| Msa0292930 | Msa0927290 | 0.810720 | 1.001778e-50 | -8.615850e-47 |
| Msa0305190 | Msa0927290 | 0.807555 | 4.774640e-50 | -8.615850e-47 |
| Msa0306210 | Msa0927290 | -0.803353 | 3.630672e-49 | -8.615850e-47 |
| Msa0313560 | Msa0927290 | 0.857712 | 1.354057e-62 | -8.615850e-47 |
| Msa0313960 | Msa0927290 | 0.819625 | 1.052935e-52 | -8.615850e-47 |
| Msa0315290 | Msa0927290 | 0.816194 | 6.271783e-52 | -8.615850e-47 |
| Msa0315530 | Msa0927290 | 0.801791 | 7.621860e-49 | -8.615850e-47 |
| Msa0315730 | Msa0927290 | 0.814878 | 1.231279e-51 | -8.615850e-47 |
| Msa0323080 | Msa0927290 | 0.803793 | 2.942810e-49 | -8.615850e-47 |
| Msa0326520 | Msa0927290 | 0.821603 | 3.698090e-53 | -8.615850e-47 |
| Msa0340470 | Msa0927290 | 0.823569 | 1.290607e-53 | -8.615850e-47 |
| Msa0344690 | Msa0927290 | -0.802287 | 6.026791e-49 | -8.615850e-47 |
| Msa0346180 | Msa0927290 | 0.805926 | 1.054391e-49 | -8.615850e-47 |
| Msa0350870 | Msa0927290 | 0.816902 | 4.352116e-52 | -8.615850e-47 |
| Msa0354800 | Msa0927290 | -0.803967 | 2.707157e-49 | -8.615850e-47 |
| Msa0355170 | Msa0927290 | 0.805301 | 1.425927e-49 | -8.615850e-47 |
| Msa0355220 | Msa0927290 | 0.809286 | 2.040170e-50 | -8.615850e-47 |
| Msa0484780 | Msa0927290 | 0.842895 | 1.955117e-58 | -8.615850e-47 |
| Msa0492880 | Msa0927290 | 0.828139 | 1.061237e-54 | -8.615850e-47 |
| Msa0498220 | Msa0927290 | 0.810735 | 9.944467e-51 | -8.615850e-47 |
| Msa0503060 | Msa0927290 | 0.817609 | 3.017312e-52 | -8.615850e-47 |
| Msa0509900 | Msa0927290 | 0.807215 | 5.634621e-50 | -8.615850e-47 |
| Msa0512900 | Msa0927290 | 0.833815 | 4.294035e-56 | -8.615850e-47 |
| Msa0516370 | Msa0927290 | 0.817589 | 3.048640e-52 | -8.615850e-47 |
| Msa0530940 | Msa0927290 | 0.815546 | 8.745635e-52 | -8.615850e-47 |
| Msa0532350 | Msa0927290 | 0.831026 | 2.107072e-55 | -8.615850e-47 |
| Msa0533070 | Msa0927290 | 0.803170 | 3.961959e-49 | -8.615850e-47 |
| Msa0536220 | Msa0927290 | 0.814176 | 1.760367e-51 | -8.615850e-47 |
| Msa0541130 | Msa0927290 | 0.818012 | 2.447156e-52 | -8.615850e-47 |
| Msa0545210 | Msa0927290 | 0.826157 | 3.163749e-54 | -8.615850e-47 |
| Msa0548280 | Msa0927290 | -0.804014 | 2.646853e-49 | -8.615850e-47 |
| Msa0555720 | Msa0927290 | 0.805410 | 1.353332e-49 | -8.615850e-47 |
| Msa0561910 | Msa0927290 | 0.810096 | 1.366290e-50 | -8.615850e-47 |
| Msa0564390 | Msa0927290 | 0.809632 | 1.719090e-50 | -8.615850e-47 |
| Msa0572480 | Msa0927290 | 0.839856 | 1.233950e-57 | -8.615850e-47 |
| Msa0576200 | Msa0927290 | 0.818058 | 2.389233e-52 | -8.615850e-47 |
| Msa0602390 | Msa0927290 | 0.812579 | 3.949215e-51 | -8.615850e-47 |
| Msa0843780 | Msa0927290 | -0.812331 | 4.474099e-51 | -8.615850e-47 |
| Msa0844240 | Msa0927290 | 0.805619 | 1.223008e-49 | -8.615850e-47 |
| Msa0850450 | Msa0927290 | 0.804147 | 2.483201e-49 | -8.615850e-47 |
| Msa0861130 | Msa0927290 | 0.841722 | 3.999201e-58 | -8.615850e-47 |
| Msa0870530 | Msa0927290 | 0.801831 | 7.479389e-49 | -8.615850e-47 |
| Msa0876850 | Msa0927290 | -0.815553 | 8.717386e-52 | -8.615850e-47 |
| Msa0880140 | Msa0927290 | 0.804329 | 2.276083e-49 | -8.615850e-47 |
| Msa0880950 | Msa0927290 | 0.822545 | 2.236577e-53 | -8.615850e-47 |
| Msa0885280 | Msa0927290 | 0.826997 | 1.994925e-54 | -8.615850e-47 |
| Msa0885290 | Msa0927290 | 0.801361 | 9.336550e-49 | -8.615850e-47 |
| Msa0892080 | Msa0927290 | 0.801863 | 7.366575e-49 | -8.615850e-47 |
| Msa0904950 | Msa0927290 | 0.804259 | 2.354286e-49 | -8.615850e-47 |
| Msa0907070 | Msa0927290 | 0.822429 | 2.380736e-53 | -8.615850e-47 |
| Msa0909120 | Msa0927290 | 0.823382 | 1.427239e-53 | -8.615850e-47 |
| Msa0909140 | Msa0927290 | 0.807029 | 6.172113e-50 | -8.615850e-47 |
| Msa0909620 | Msa0927290 | 0.817355 | 3.443010e-52 | -8.615850e-47 |
| Msa0910000 | Msa0927290 | 0.802329 | 5.907427e-49 | -8.615850e-47 |
| Msa0918220 | Msa0927290 | 0.805862 | 1.087645e-49 | -8.615850e-47 |
| Msa0924310 | Msa0927290 | 0.812618 | 3.871576e-51 | -8.615850e-47 |
| Msa0925290 | Msa0927290 | 0.856521 | 3.041727e-62 | -8.615850e-47 |
| Msa0925810 | Msa0927290 | 0.803141 | 4.017139e-49 | -8.615850e-47 |
| Msa0926890 | Msa0927290 | 0.801337 | 9.444878e-49 | -8.615850e-47 |
| Msa0927280 | Msa0927290 | 0.851158 | 1.064630e-60 | -8.615850e-47 |
| Msa0927290 | Msa0927380 | 0.810375 | 1.189272e-50 | -8.615850e-47 |
| Msa0927290 | Msa0935670 | 0.812477 | 4.157583e-51 | -8.615850e-47 |
| Msa0927290 | Msa0935910 | 0.829735 | 4.358528e-55 | -8.615850e-47 |
| Msa0927290 | Msa0936210 | 0.813577 | 2.385032e-51 | -8.615850e-47 |
| Msa0927290 | Msa0947660 | 0.804897 | 1.732528e-49 | -8.615850e-47 |
| Msa0927290 | Msa0954910 | 0.813689 | 2.254087e-51 | -8.615850e-47 |
| Msa0927290 | Msa0954920 | 0.811592 | 6.483169e-51 | -8.615850e-47 |
| Msa0927290 | Msa0964900 | 0.807051 | 6.103793e-50 | -8.615850e-47 |
| Msa0927290 | Msa0967580 | 0.808942 | 2.416863e-50 | -8.615850e-47 |
| Msa0927290 | Msa0969450 | 0.820225 | 7.674441e-53 | -8.615850e-47 |
| Msa0927290 | Msa0969520 | 0.826440 | 2.709449e-54 | -8.615850e-47 |
| Msa0927290 | Msa0969600 | 0.814787 | 1.289608e-51 | -8.615850e-47 |
| Msa0927290 | Msa0976670 | 0.828071 | 1.102210e-54 | -8.615850e-47 |
| Msa0927290 | Msa0990350 | 0.815427 | 9.298986e-52 | -8.615850e-47 |
| Msa0927290 | Msa0990960 | 0.804478 | 2.118800e-49 | -8.615850e-47 |
| Msa0927290 | Msa0999120 | 0.819637 | 1.046314e-52 | -8.615850e-47 |
| Msa0927290 | Msa1006850 | 0.804108 | 2.530114e-49 | -8.615850e-47 |
| Msa0927290 | Msa1014540 | 0.833068 | 6.594577e-56 | -8.615850e-47 |
| Msa0927290 | Msa1015790 | 0.821541 | 3.822674e-53 | -8.615850e-47 |
| Msa0927290 | Msa1030970 | 0.806656 | 7.400092e-50 | -8.615850e-47 |
| Msa0927290 | Msa1035300 | 0.812903 | 3.354257e-51 | -8.615850e-47 |
| Msa0927290 | Msa1035310 | 0.800510 | 1.393146e-48 | -8.615850e-47 |
| Msa0927290 | Msa1045200 | 0.823652 | 1.234343e-53 | -8.615850e-47 |
| Msa0927290 | Msa1052830 | 0.802499 | 5.449707e-49 | -8.615850e-47 |
| Msa0927290 | Msa1053280 | 0.812541 | 4.026317e-51 | -8.615850e-47 |
| Msa0927290 | Msa1058580 | 0.806207 | 9.202227e-50 | -8.615850e-47 |
| Msa0927290 | Msa1059570 | 0.828602 | 8.204182e-55 | -8.615850e-47 |
| Msa0927290 | Msa1065610 | 0.802419 | 5.660358e-49 | -8.615850e-47 |
| Msa0927290 | Msa1068200 | -0.802169 | 6.374257e-49 | -8.615850e-47 |
| Msa0927290 | Msa1071110 | 0.810935 | 9.002030e-51 | -8.615850e-47 |
| Msa0927290 | Msa1075080 | -0.801290 | 9.655802e-49 | -8.615850e-47 |
| Msa0927290 | Msa1075220 | -0.848279 | 6.781423e-60 | -8.615850e-47 |
| Msa0927290 | Msa1075540 | 0.810343 | 1.208436e-50 | -8.615850e-47 |
| Msa0927290 | Msa1075650 | 0.829239 | 5.752626e-55 | -8.615850e-47 |
| Msa0927290 | Msa1079430 | 0.812426 | 4.264528e-51 | -8.615850e-47 |
| Msa0927290 | Msa1081590 | 0.808283 | 3.341301e-50 | -8.615850e-47 |
| Msa0927290 | Msa1081880 | 0.803507 | 3.373021e-49 | -8.615850e-47 |
| Msa0927290 | Msa1082500 | 0.855349 | 6.697709e-62 | -8.615850e-47 |
| Msa0927290 | Msa1084260 | 0.820188 | 7.826680e-53 | -8.615850e-47 |
| Msa0927290 | Msa1084900 | 0.817685 | 2.901361e-52 | -8.615850e-47 |
| Msa0927290 | Msa1089040 | 0.800744 | 1.248267e-48 | -8.615850e-47 |
| Msa0927290 | Msa1114030 | 0.807634 | 4.592172e-50 | -8.615850e-47 |
| Msa0927290 | Msa1116130 | -0.814098 | 1.831913e-51 | -8.615850e-47 |
| Msa0927290 | Msa1116260 | 0.802899 | 4.505705e-49 | -8.615850e-47 |
| Msa0927290 | Msa1116440 | 0.813379 | 2.637068e-51 | -8.615850e-47 |
| Msa0927290 | Msa1117170 | 0.816475 | 5.426406e-52 | -8.615850e-47 |
| Msa0927290 | Msa1121490 | 0.813946 | 1.978249e-51 | -8.615850e-47 |
| Msa0927290 | Msa1131220 | 0.803209 | 3.889099e-49 | -8.615850e-47 |
| Msa0927290 | Msa1139000 | -0.829037 | 6.440227e-55 | -8.615850e-47 |
| Msa0927290 | Msa1144720 | -0.809928 | 1.484454e-50 | -8.615850e-47 |
| Msa0927290 | Msa1158310 | 0.801137 | 1.037551e-48 | -8.615850e-47 |
| Msa0927290 | Msa1160670 | 0.827752 | 1.315343e-54 | -8.615850e-47 |
| Msa0927290 | Msa1162550 | -0.833695 | 4.601690e-56 | -8.615850e-47 |
| Msa0927290 | Msa1167220 | 0.806909 | 6.542426e-50 | -8.615850e-47 |
| Msa0927290 | Msa1171610 | 0.808932 | 2.428991e-50 | -8.615850e-47 |
| Msa0927290 | Msa1174040 | 0.815705 | 8.061027e-52 | -8.615850e-47 |
| Msa0927290 | Msa1178110 | 0.803539 | 3.321964e-49 | -8.615850e-47 |
| Msa0927290 | Msa1179770 | 0.827836 | 1.255764e-54 | -8.615850e-47 |
| Msa0927290 | Msa1188710 | 0.816885 | 4.389533e-52 | -8.615850e-47 |
| Msa0927290 | Msa1192990 | 0.832503 | 9.108153e-56 | -8.615850e-47 |
| Msa0927290 | Msa1224480 | 0.815542 | 8.762975e-52 | -8.615850e-47 |
| Msa0927290 | Msa1233890 | 0.825762 | 3.927055e-54 | -8.615850e-47 |
| Msa0927290 | Msa1239720 | 0.842020 | 3.335859e-58 | -8.615850e-47 |
| Msa0927290 | Msa1241130 | -0.800477 | 1.415048e-48 | -8.615850e-47 |
| Msa0927290 | Msa1242220 | 0.813118 | 3.009787e-51 | -8.615850e-47 |
| Msa0927290 | Msa1246510 | 0.800217 | 1.598169e-48 | -8.615850e-47 |
| Msa0927290 | Msa1249490 | 0.803297 | 3.727938e-49 | -8.615850e-47 |
| Msa0927290 | Msa1261780 | 0.803240 | 3.831534e-49 | -8.615850e-47 |
| Msa0927290 | Msa1268700 | 0.826103 | 3.259572e-54 | -8.615850e-47 |
| Msa0927290 | Msa1270610 | 0.802090 | 6.616820e-49 | -8.615850e-47 |
| Msa0927290 | Msa1273430 | 0.805261 | 1.453971e-49 | -8.615850e-47 |
| Msa0927290 | Msa1277660 | 0.807107 | 5.940647e-50 | -8.615850e-47 |
| Msa0927290 | Msa1283840 | 0.801620 | 8.262681e-49 | -8.615850e-47 |
| Msa0927290 | Msa1283860 | 0.814382 | 1.584984e-51 | -8.615850e-47 |
| Msa0927290 | Msa1284680 | 0.840396 | 8.919418e-58 | -8.615850e-47 |
| Msa0927290 | Msa1288550 | 0.803795 | 2.938826e-49 | -8.615850e-47 |
| Msa0927290 | Msa1291660 | 0.865522 | 5.556225e-65 | -8.615850e-47 |
| Msa0927290 | Msa1307070 | 0.846452 | 2.153475e-59 | -8.615850e-47 |
| Msa0927290 | Msa1313140 | 0.802760 | 4.813587e-49 | -8.615850e-47 |
| Msa0927290 | Msa1316200 | 0.850874 | 1.280780e-60 | -8.615850e-47 |
| Msa0927290 | Msa1322890 | 0.840410 | 8.845329e-58 | -8.615850e-47 |
| Msa0927290 | Msa1327680 | 0.801193 | 1.010703e-48 | -8.615850e-47 |
| Msa0927290 | Msa1329700 | 0.806784 | 6.951074e-50 | -8.615850e-47 |
| Msa0927290 | Msa1341520 | 0.802969 | 4.359756e-49 | -8.615850e-47 |
| Msa0927290 | Msa1353470 | 0.813628 | 2.324949e-51 | -8.615850e-47 |
| Msa0927290 | Msa1356370 | 0.804397 | 2.202819e-49 | -8.615850e-47 |
| Msa0927290 | Msa1357530 | 0.800398 | 1.468369e-48 | -8.615850e-47 |
| Msa0927290 | Msa1360060 | 0.816532 | 5.268606e-52 | -8.615850e-47 |
| Msa0927290 | Msa1372760 | 0.838969 | 2.096552e-57 | -8.615850e-47 |
| Msa0927290 | Msa1373030 | 0.826894 | 2.111100e-54 | -8.615850e-47 |
| Msa0927290 | Msa1378760 | 0.803621 | 3.194926e-49 | -8.615850e-47 |
| Msa0927290 | Msa1379850 | 0.828682 | 7.848531e-55 | -8.615850e-47 |
| Msa0927290 | Msa1384330 | 0.809703 | 1.659545e-50 | -8.615850e-47 |
| Msa0927290 | Msa1384350 | 0.807218 | 5.626464e-50 | -8.615850e-47 |
| Msa0927290 | Msa1388510 | 0.829330 | 5.469074e-55 | -8.615850e-47 |
| Msa0927290 | Msa1388750 | 0.805088 | 1.580634e-49 | -8.615850e-47 |
| Msa0927290 | Msa1388930 | 0.803488 | 3.404187e-49 | -8.615850e-47 |
| Msa0927290 | Msa1390050 | 0.801161 | 1.026208e-48 | -8.615850e-47 |
| Msa0927290 | Msa1392260 | 0.833286 | 5.818137e-56 | -8.615850e-47 |
| Msa0927290 | Msa1393410 | 0.805460 | 1.320618e-49 | -8.615850e-47 |
| Msa0927290 | Msa1397610 | 0.818085 | 2.356516e-52 | -8.615850e-47 |
| Msa0927290 | Msa1397860 | 0.812211 | 4.753121e-51 | -8.615850e-47 |
| Msa0927290 | Msa1409700 | 0.820964 | 5.191507e-53 | -8.615850e-47 |
| Msa0927290 | Msa1411020 | 0.814423 | 1.552313e-51 | -8.615850e-47 |
| Msa0927290 | Msa1420290 | 0.844913 | 5.632463e-59 | -8.615850e-47 |
| Msa0927290 | Msa1424290 | 0.812687 | 3.739919e-51 | -8.615850e-47 |
| Msa0927290 | Msa1424680 | 0.804983 | 1.662449e-49 | -8.615850e-47 |
| Msa0927290 | Msa1429900 | 0.819186 | 1.325323e-52 | -8.615850e-47 |
| Msa0927290 | Msa1434350 | 0.810242 | 1.270231e-50 | -8.615850e-47 |
| Msa0927290 | Msa1435270 | 0.806389 | 8.425015e-50 | -8.615850e-47 |
| Msa0927290 | Msa1435420 | 0.803281 | 3.756788e-49 | -8.615850e-47 |
| Msa0927290 | Msa1436480 | 0.825533 | 4.450888e-54 | -8.615850e-47 |
| Msa0927290 | Msa1439320 | 0.818225 | 2.190642e-52 | -8.615850e-47 |
| Msa0927290 | Msa1451620 | -0.833665 | 4.679780e-56 | -8.615850e-47 |
| Msa0927290 | Msa1452240 | 0.804159 | 2.468971e-49 | -8.615850e-47 |
| Msa0927290 | Msa1453560 | 0.814758 | 1.309000e-51 | -8.615850e-47 |
| Msa0927290 | Msa1454860 | 0.800640 | 1.310944e-48 | -8.615850e-47 |
| Msa0927290 | Msa1460050 | 0.817560 | 3.096005e-52 | -8.615850e-47 |
| Msa0927290 | Msa1466540 | 0.804266 | 2.346191e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927290 | MtrunA17_Chr2g0325521 | 74.138 | 116 | 9 | 2 | 58 | 153 | 107 | 221 | 6.47e-50 | 160 |
| Msa0927290 | MtrunA17_Chr4g0041051 | 56.034 | 116 | 30 | 2 | 58 | 153 | 116 | 230 | 2.31e-34 | 120 |
| Msa0927290 | MtrunA17_Chr4g0045901 | 35.897 | 117 | 53 | 3 | 58 | 154 | 124 | 238 | 3.16e-14 | 67.8 |
| Msa0927290 | MtrunA17_Chr8g0384241 | 96.154 | 26 | 1 | 0 | 30 | 55 | 366 | 391 | 3.17e-11 | 60.5 |
| Msa0927290 | MtrunA17_Chr1g0152991 | 79.310 | 29 | 6 | 0 | 30 | 58 | 33 | 61 | 6.93e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCATCTTATGATAATA+AGG | 0.187887 | 6_2:+71550692 | Msa0927290:CDS |
| CTTATCTCATGACTGTCTTT+TGG | 0.232859 | 6_2:-71550555 | None:intergenic |
| AACCTGCGTCAAATCACTTT+TGG | 0.254045 | 6_2:-71550044 | None:intergenic |
| AAGGGCAGAGAATGCAACTT+TGG | 0.427512 | 6_2:+71550711 | Msa0927290:CDS |
| ATGGTTAATATAGAAGTTGC+TGG | 0.428166 | 6_2:+71546882 | Msa0927290:CDS |
| AGGGCAGAGAATGCAACTTT+GGG | 0.451743 | 6_2:+71550712 | Msa0927290:CDS |
| ACTTCATCTTATGATAATAA+GGG | 0.489015 | 6_2:+71550693 | Msa0927290:CDS |
| GGATGGCCTATGCGCGATGA+TGG | 0.495602 | 6_2:+71550007 | Msa0927290:CDS |
| GATGGCCTATGCGCGATGAT+GGG | 0.500818 | 6_2:+71550008 | Msa0927290:CDS |
| TGGTTAATATAGAAGTTGCT+GGG | 0.515156 | 6_2:+71546883 | Msa0927290:CDS |
| AATGCAGCACAAGCAAGTGA+AGG | 0.583141 | 6_2:+71550522 | Msa0927290:CDS |
| ATGCAGCACAAGCAAGTGAA+GGG | 0.608119 | 6_2:+71550523 | Msa0927290:CDS |
| AAATCCCCATCATCGCGCAT+AGG | 0.609170 | 6_2:-71550013 | None:intergenic |
| ATCCAAAAGTGATTTGACGC+AGG | 0.613434 | 6_2:+71550042 | Msa0927290:CDS |
| GCACTAGAGAGATATGATGC+AGG | 0.616522 | 6_2:+71546912 | Msa0927290:CDS |
| ATAAGATTTGAATCACAAGA+AGG | 0.621854 | 6_2:+71550573 | Msa0927290:CDS |
| GCAGAGAATGCAACTTTGGG+AGG | 0.622770 | 6_2:+71550715 | Msa0927290:CDS |
| GGTTAATATAGAAGTTGCTG+GGG | 0.629673 | 6_2:+71546884 | Msa0927290:CDS |
| CTAGAGAGATATGATGCAGG+TGG | 0.635595 | 6_2:+71546915 | Msa0927290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTCAAAAAATATATAATAAA+GGG | - | chr6_2:71549685-71549704 | None:intergenic | 10.0% |
| !! | TCTCAAAAAATATATAATAA+AGG | - | chr6_2:71549686-71549705 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAGATTTTTTATT+TGG | + | chr6_2:71549695-71549714 | Msa0927290:intron | 10.0% |
| !!! | ATTTTAAAATGCTTTATTTT+TGG | + | chr6_2:71550091-71550110 | Msa0927290:intron | 10.0% |
| !!! | ATATGTTTTATATAAAGTGT+AGG | + | chr6_2:71547086-71547105 | Msa0927290:intron | 15.0% |
| !!! | TTTTTAATTATACTTATTGG+TGG | + | chr6_2:71547185-71547204 | Msa0927290:intron | 15.0% |
| !!! | TTTTAATTATACTTATTGGT+GGG | + | chr6_2:71547186-71547205 | Msa0927290:intron | 15.0% |
| !! | TTAATCAGTTTATTGTTTAT+GGG | + | chr6_2:71547496-71547515 | Msa0927290:intron | 15.0% |
| !!! | TGTTGTATATATTTTTAACT+TGG | - | chr6_2:71547963-71547982 | None:intergenic | 15.0% |
| !! | AATCACATATAGAAAAATTA+TGG | - | chr6_2:71549346-71549365 | None:intergenic | 15.0% |
| !! | TTATAACTTCATATAAGTTT+AGG | + | chr6_2:71549396-71549415 | Msa0927290:intron | 15.0% |
| !!! | AAAAAAAACCTACTTTTTTT+GGG | - | chr6_2:71549850-71549869 | None:intergenic | 15.0% |
| !!! | AAAAAAAAACCTACTTTTTT+TGG | - | chr6_2:71549851-71549870 | None:intergenic | 15.0% |
| !! | GAATATAGTATTATTTAGAA+TGG | - | chr6_2:71549903-71549922 | None:intergenic | 15.0% |
| !!! | AATTTTCTTTTCTAAAAGAA+GGG | + | chr6_2:71550243-71550262 | Msa0927290:intron | 15.0% |
| !!! | TTTGAAATTTGAAATGTTTG+CGG | + | chr6_2:71547312-71547331 | Msa0927290:intron | 20.0% |
| !! | AGAAACATATAATCATTTGA+AGG | + | chr6_2:71547399-71547418 | Msa0927290:intron | 20.0% |
| !! | GAAACATATAATCATTTGAA+GGG | + | chr6_2:71547400-71547419 | Msa0927290:intron | 20.0% |
| !! | CTTAATCAGTTTATTGTTTA+TGG | + | chr6_2:71547495-71547514 | Msa0927290:intron | 20.0% |
| !!! | TTTATTAGTGTGGTTTTTTT+TGG | + | chr6_2:71547858-71547877 | Msa0927290:intron | 20.0% |
| !!! | ATCATCAAAAGGTATAAAAT+AGG | - | chr6_2:71548223-71548242 | None:intergenic | 20.0% |
| !! | TGTTCATAATAATATGCAAT+TGG | + | chr6_2:71548260-71548279 | Msa0927290:intron | 20.0% |
| !! | TTATGTCATTGTAAAGTTTA+TGG | + | chr6_2:71548518-71548537 | Msa0927290:intron | 20.0% |
| !! | TATCAATTTATTGTTGAATG+AGG | - | chr6_2:71548643-71548662 | None:intergenic | 20.0% |
| !! | ATAAATTTATGTGAAACTCA+AGG | + | chr6_2:71549064-71549083 | Msa0927290:intron | 20.0% |
| !! | ATTGAAACTTTAACCAAATA+AGG | - | chr6_2:71549236-71549255 | None:intergenic | 20.0% |
| !! | ATATATGAAGAACATTTATG+GGG | - | chr6_2:71549573-71549592 | None:intergenic | 20.0% |
| !! | CATATATGAAGAACATTTAT+GGG | - | chr6_2:71549574-71549593 | None:intergenic | 20.0% |
| !! | TCATATATGAAGAACATTTA+TGG | - | chr6_2:71549575-71549594 | None:intergenic | 20.0% |
| !! | GAGAAATTGTAATATATATC+AGG | - | chr6_2:71549647-71549666 | None:intergenic | 20.0% |
| !! | ATATATTACAATTTCTCCTT+TGG | + | chr6_2:71549650-71549669 | Msa0927290:intron | 20.0% |
| !! | TAAGCTATAAGTTATTTACA+AGG | + | chr6_2:71549786-71549805 | Msa0927290:intron | 20.0% |
| !! | AAGCTATAAGTTATTTACAA+GGG | + | chr6_2:71549787-71549806 | Msa0927290:intron | 20.0% |
| !!! | GTTATATTTTAAGAAGTAAC+TGG | + | chr6_2:71550064-71550083 | Msa0927290:intron | 20.0% |
| !! | ACTTATATAAATTCCATATC+AGG | + | chr6_2:71550115-71550134 | Msa0927290:intron | 20.0% |
| !! | CTTATATAAATTCCATATCA+GGG | + | chr6_2:71550116-71550135 | Msa0927290:intron | 20.0% |
| !!! | CAATTTTCTTTTCTAAAAGA+AGG | + | chr6_2:71550242-71550261 | Msa0927290:intron | 20.0% |
| !!! | GGAATGGAATAATTTAATTT+TGG | + | chr6_2:71550264-71550283 | Msa0927290:intron | 20.0% |
| !! | ACTTCATCTTATGATAATAA+GGG | + | chr6_2:71550693-71550712 | Msa0927290:CDS | 20.0% |
| ! | AATAACTCGATATAGAGAAT+TGG | + | chr6_2:71547061-71547080 | Msa0927290:intron | 25.0% |
| ! | ATTTATTTGATCATCTGTGA+TGG | + | chr6_2:71547133-71547152 | Msa0927290:intron | 25.0% |
| ! | TTTATTTGATCATCTGTGAT+GGG | + | chr6_2:71547134-71547153 | Msa0927290:intron | 25.0% |
| ! | ACAAATGTTAGAATAGAGAA+AGG | - | chr6_2:71547355-71547374 | None:intergenic | 25.0% |
| ! | ATAATCATTTGAAGGGAAAA+TGG | + | chr6_2:71547407-71547426 | Msa0927290:intron | 25.0% |
| ! | TCATCCCCTATATATAATTA+GGG | - | chr6_2:71547522-71547541 | None:intergenic | 25.0% |
| ! | TTCATCCCCTATATATAATT+AGG | - | chr6_2:71547523-71547542 | None:intergenic | 25.0% |
| ! | AAATGGAGATGAAATGATAT+TGG | + | chr6_2:71547580-71547599 | Msa0927290:intron | 25.0% |
| ! | GAAATGATATTGGTATAGTA+AGG | + | chr6_2:71547590-71547609 | Msa0927290:intron | 25.0% |
| ! | AATTGAACGTGCTAAATAAA+TGG | - | chr6_2:71547727-71547746 | None:intergenic | 25.0% |
| ! | AACACTTCAATAAATGATGT+TGG | - | chr6_2:71547840-71547859 | None:intergenic | 25.0% |
| !! | TATTGAAGTGTTTATTAGTG+TGG | + | chr6_2:71547848-71547867 | Msa0927290:intron | 25.0% |
| ! | AAGACAACAATATCATCAAA+AGG | - | chr6_2:71548234-71548253 | None:intergenic | 25.0% |
| ! | CATTGTGAGGAAAATAAAAT+TGG | + | chr6_2:71548297-71548316 | Msa0927290:intron | 25.0% |
| ! | AACAACATTTATTGCAGTTT+AGG | - | chr6_2:71548361-71548380 | None:intergenic | 25.0% |
| !! | TCAATTTGTTCCTTAAATAG+GGG | - | chr6_2:71548486-71548505 | None:intergenic | 25.0% |
| !! | CTCAATTTGTTCCTTAAATA+GGG | - | chr6_2:71548487-71548506 | None:intergenic | 25.0% |
| ! | TTTACATCTGAATGTATGTT+TGG | + | chr6_2:71548829-71548848 | Msa0927290:intron | 25.0% |
| !! | AGATTACCTCTAGAAAAAAA+AGG | - | chr6_2:71548879-71548898 | None:intergenic | 25.0% |
| ! | AAGGAATAAGGATAATCATA+TGG | - | chr6_2:71549191-71549210 | None:intergenic | 25.0% |
| ! | TTTCAATTCCAATATCATCT+TGG | - | chr6_2:71549285-71549304 | None:intergenic | 25.0% |
| !!! | TATGATTTGTTATTCTCCAA+TGG | + | chr6_2:71549441-71549460 | Msa0927290:intron | 25.0% |
| ! | CAAAATAATAGTTAAGCCAT+TGG | - | chr6_2:71549460-71549479 | None:intergenic | 25.0% |
| ! | TTGTAATATATATCAGGCAT+GGG | - | chr6_2:71549641-71549660 | None:intergenic | 25.0% |
| ! | ATTGTAATATATATCAGGCA+TGG | - | chr6_2:71549642-71549661 | None:intergenic | 25.0% |
| ! | TCAATTACTTATTTAGAGAG+TGG | + | chr6_2:71549945-71549964 | Msa0927290:intron | 25.0% |
| !! | TTTTTGTGTAATGTAGCTTT+TGG | + | chr6_2:71550201-71550220 | Msa0927290:intron | 25.0% |
| ! | TCTACACAAATATACAAACA+TGG | + | chr6_2:71550389-71550408 | Msa0927290:intron | 25.0% |
| !! | GTGTACCTTTTTAAATTAGT+TGG | + | chr6_2:71550446-71550465 | Msa0927290:intron | 25.0% |
| ! | TCTGTCCAACTAATTTAAAA+AGG | - | chr6_2:71550454-71550473 | None:intergenic | 25.0% |
| ! | ATAAGATTTGAATCACAAGA+AGG | + | chr6_2:71550573-71550592 | Msa0927290:CDS | 25.0% |
| !!! | AAGAAGGTGGATTAAATAAA+TGG | + | chr6_2:71550589-71550608 | Msa0927290:intron | 25.0% |
| ! | CACTTCATCTTATGATAATA+AGG | + | chr6_2:71550692-71550711 | Msa0927290:CDS | 25.0% |
| ATGGTTAATATAGAAGTTGC+TGG | + | chr6_2:71546882-71546901 | Msa0927290:CDS | 30.0% | |
| TGGTTAATATAGAAGTTGCT+GGG | + | chr6_2:71546883-71546902 | Msa0927290:CDS | 30.0% | |
| !! | AGTTTTGTCAACAAGTATGT+CGG | + | chr6_2:71546947-71546966 | Msa0927290:intron | 30.0% |
| AGAAGTTGCATTTATGTTGA+CGG | + | chr6_2:71547015-71547034 | Msa0927290:intron | 30.0% | |
| !!! | CATTTATGTTGACGGATTTT+GGG | + | chr6_2:71547023-71547042 | Msa0927290:intron | 30.0% |
| TTATTTGATCATCTGTGATG+GGG | + | chr6_2:71547135-71547154 | Msa0927290:intron | 30.0% | |
| !!! | TTGAAGGGAAAATGGTTTTT+TGG | + | chr6_2:71547415-71547434 | Msa0927290:intron | 30.0% |
| TATGGGCCCTAATTATATAT+AGG | + | chr6_2:71547513-71547532 | Msa0927290:intron | 30.0% | |
| ATGGGCCCTAATTATATATA+GGG | + | chr6_2:71547514-71547533 | Msa0927290:intron | 30.0% | |
| TGGTATAGTAAGGATTGATA+AGG | + | chr6_2:71547600-71547619 | Msa0927290:intron | 30.0% | |
| CGTGCTAAATAAATGGAATA+GGG | - | chr6_2:71547720-71547739 | None:intergenic | 30.0% | |
| ACGTGCTAAATAAATGGAAT+AGG | - | chr6_2:71547721-71547740 | None:intergenic | 30.0% | |
| ! | TCACTCTTTTTCTGCAAAAA+TGG | + | chr6_2:71548015-71548034 | Msa0927290:intron | 30.0% |
| TAGCAAAATCATCACACAAT+GGG | - | chr6_2:71548086-71548105 | None:intergenic | 30.0% | |
| TTAGCAAAATCATCACACAA+TGG | - | chr6_2:71548087-71548106 | None:intergenic | 30.0% | |
| !!! | CTGGTTTTTTTTCCTACAAT+TGG | - | chr6_2:71548152-71548171 | None:intergenic | 30.0% |
| ! | TTTTTATCTGCTACATTGTG+AGG | + | chr6_2:71548284-71548303 | Msa0927290:intron | 30.0% |
| TTACTTTATCTTGCACAGTA+TGG | + | chr6_2:71548426-71548445 | Msa0927290:intron | 30.0% | |
| GAAAAATCCATGAAACTGTT+AGG | + | chr6_2:71548448-71548467 | Msa0927290:intron | 30.0% | |
| ! | CCTCAATTTGTTCCTTAAAT+AGG | - | chr6_2:71548488-71548507 | None:intergenic | 30.0% |
| CCTATTTAAGGAACAAATTG+AGG | + | chr6_2:71548485-71548504 | Msa0927290:intron | 30.0% | |
| GTGTTCATAATCATGAAAGA+TGG | + | chr6_2:71548587-71548606 | Msa0927290:intron | 30.0% | |
| TTCATAATCATGAAAGATGG+AGG | + | chr6_2:71548590-71548609 | Msa0927290:intron | 30.0% | |
| AAGATTCAAAGTAGATAGCA+AGG | - | chr6_2:71548746-71548765 | None:intergenic | 30.0% | |
| !!! | TAAGCACCTTTTTTTTCTAG+AGG | + | chr6_2:71548870-71548889 | Msa0927290:intron | 30.0% |
| ATTAATTACCGAAGGGTTTA+GGG | - | chr6_2:71548948-71548967 | None:intergenic | 30.0% | |
| AATTAATTACCGAAGGGTTT+AGG | - | chr6_2:71548949-71548968 | None:intergenic | 30.0% | |
| ACAGCAAATTAATTACCGAA+GGG | - | chr6_2:71548955-71548974 | None:intergenic | 30.0% | |
| AACAGCAAATTAATTACCGA+AGG | - | chr6_2:71548956-71548975 | None:intergenic | 30.0% | |
| !!! | GTTCTGATCTAAGCATTTTT+TGG | + | chr6_2:71548973-71548992 | Msa0927290:intron | 30.0% |
| GTATATGACTTATCAAACCA+TGG | + | chr6_2:71549122-71549141 | Msa0927290:intron | 30.0% | |
| TTATCCTTATTCCTTTCTTG+AGG | + | chr6_2:71549196-71549215 | Msa0927290:intron | 30.0% | |
| ACTTTAACCAAATAAGGACT+TGG | - | chr6_2:71549230-71549249 | None:intergenic | 30.0% | |
| TTGAAACTCCAAGATGATAT+TGG | + | chr6_2:71549274-71549293 | Msa0927290:intron | 30.0% | |
| !! | ATTGAAAGTGTTACTTTGTG+TGG | + | chr6_2:71549298-71549317 | Msa0927290:intron | 30.0% |
| GAGACAAATCTAAACTTATG+AGG | + | chr6_2:71549517-71549536 | Msa0927290:intron | 30.0% | |
| CTTAATGTTGAAGAATGTGT+TGG | + | chr6_2:71549759-71549778 | Msa0927290:intron | 30.0% | |
| !!! | AAAACCTACTTTTTTTGGGT+AGG | - | chr6_2:71549846-71549865 | None:intergenic | 30.0% |
| !!! | AATGTAGCTTTTGGTTTTCA+AGG | + | chr6_2:71550210-71550229 | Msa0927290:intron | 30.0% |
| !!! | ATGTAGCTTTTGGTTTTCAA+GGG | + | chr6_2:71550211-71550230 | Msa0927290:intron | 30.0% |
| !! | TCTTTTCTAAAAGAAGGGAA+TGG | + | chr6_2:71550248-71550267 | Msa0927290:intron | 30.0% |
| AAGTGTAAGCATAACTAAGT+TGG | - | chr6_2:71550351-71550370 | None:intergenic | 30.0% | |
| AACTTAGTTATGCTTACACT+TGG | + | chr6_2:71550350-71550369 | Msa0927290:intron | 30.0% | |
| TGTAATAACTTCAGCTAGTA+AGG | - | chr6_2:71550481-71550500 | None:intergenic | 30.0% | |
| GTGATGCTCTAATTGAATAA+GGG | - | chr6_2:71550618-71550637 | None:intergenic | 30.0% | |
| AGTGATGCTCTAATTGAATA+AGG | - | chr6_2:71550619-71550638 | None:intergenic | 30.0% | |
| AACAAAAAACTGTCGATACT+CGG | - | chr6_2:71550800-71550819 | None:intergenic | 30.0% | |
| GGTTAATATAGAAGTTGCTG+GGG | + | chr6_2:71546884-71546903 | Msa0927290:CDS | 35.0% | |
| !!! | GCATTTATGTTGACGGATTT+TGG | + | chr6_2:71547022-71547041 | Msa0927290:intron | 35.0% |
| ACGAACTTGTGATATAGTGT+CGG | + | chr6_2:71547258-71547277 | Msa0927290:intron | 35.0% | |
| TGGGCCCTAATTATATATAG+GGG | + | chr6_2:71547515-71547534 | Msa0927290:intron | 35.0% | |
| TTGGAATTGATGAGAGCAAA+TGG | + | chr6_2:71547563-71547582 | Msa0927290:intron | 35.0% | |
| GTAGATGCAGTGAGTTATAT+AGG | - | chr6_2:71547909-71547928 | None:intergenic | 35.0% | |
| TGTATTGAGTTCAGAAAAGC+TGG | - | chr6_2:71547989-71548008 | None:intergenic | 35.0% | |
| CTTGAATCACTTCCAATTGT+AGG | + | chr6_2:71548137-71548156 | Msa0927290:intron | 35.0% | |
| ACTAAAGCTGCAGAAATTGT+TGG | + | chr6_2:71548178-71548197 | Msa0927290:intron | 35.0% | |
| AGTTTAGGCAGATGATGTAA+AGG | - | chr6_2:71548346-71548365 | None:intergenic | 35.0% | |
| GATTCTTCCTAACAGTTTCA+TGG | - | chr6_2:71548458-71548477 | None:intergenic | 35.0% | |
| GGAACAAATTGAGGAGATTT+CGG | + | chr6_2:71548494-71548513 | Msa0927290:intron | 35.0% | |
| ! | GAGTCATGATTATCTTTTGC+AGG | + | chr6_2:71548904-71548923 | Msa0927290:intron | 35.0% |
| TCAAGGCTACTATTTGTTCA+TGG | + | chr6_2:71549081-71549100 | Msa0927290:intron | 35.0% | |
| ! | TTGTTTCTTCTCTCTTACCA+TGG | - | chr6_2:71549142-71549161 | None:intergenic | 35.0% |
| ATGGTAAGAGAGAAGAAACA+AGG | + | chr6_2:71549141-71549160 | Msa0927290:intron | 35.0% | |
| ACAAGGTCAATATCTTTGTG+AGG | + | chr6_2:71549158-71549177 | Msa0927290:intron | 35.0% | |
| TGAACCTACCCAAAAAAAGT+AGG | + | chr6_2:71549839-71549858 | Msa0927290:intron | 35.0% | |
| TTTAGAGAGTGGTTATGCAA+TGG | + | chr6_2:71549956-71549975 | Msa0927290:intron | 35.0% | |
| !! | TCACTTGATTGCTTTTCTCT+TGG | + | chr6_2:71549986-71550005 | Msa0927290:CDS | 35.0% |
| !! | TTGATTGCTTTTCTCTTGGA+TGG | + | chr6_2:71549990-71550009 | Msa0927290:CDS | 35.0% |
| AATTCCATATCAGGGAAGAA+AGG | + | chr6_2:71550124-71550143 | Msa0927290:intron | 35.0% | |
| ATTCCATATCAGGGAAGAAA+GGG | + | chr6_2:71550125-71550144 | Msa0927290:intron | 35.0% | |
| ! | CTTATCTCATGACTGTCTTT+TGG | - | chr6_2:71550558-71550577 | None:intergenic | 35.0% |
| AGATTTGAATCACAAGAAGG+TGG | + | chr6_2:71550576-71550595 | Msa0927290:intron | 35.0% | |
| CTATGTTGTGAACACAAAAC+AGG | + | chr6_2:71550637-71550656 | Msa0927290:intron | 35.0% | |
| !!! | GAGTATCGACAGTTTTTTGT+TGG | + | chr6_2:71550799-71550818 | Msa0927290:CDS | 35.0% |
| CGAACTTGTGATATAGTGTC+GGG | + | chr6_2:71547259-71547278 | Msa0927290:intron | 40.0% | |
| ! | GAAGATGAAGTTGCTGATTG+TGG | + | chr6_2:71547540-71547559 | Msa0927290:intron | 40.0% |
| ! | ATGAAGTTGCTGATTGTGGT+TGG | + | chr6_2:71547544-71547563 | Msa0927290:intron | 40.0% |
| AAATCTACACACACGTGACA+TGG | - | chr6_2:71547658-71547677 | None:intergenic | 40.0% | |
| GGAAAGCTAACATGCAATCT+TGG | - | chr6_2:71547888-71547907 | None:intergenic | 40.0% | |
| ! | CTGCAGCTTTAGTTATCTTC+TGG | - | chr6_2:71548171-71548190 | None:intergenic | 40.0% |
| AAAGCTGCAGAAATTGTTGG+CGG | + | chr6_2:71548181-71548200 | Msa0927290:intron | 40.0% | |
| GAATCTCTTGCCCCTATTTA+AGG | + | chr6_2:71548473-71548492 | Msa0927290:intron | 40.0% | |
| ACCTTAAACCCTAAACCCTT+CGG | + | chr6_2:71548937-71548956 | Msa0927290:intron | 40.0% | |
| TGCACCTCAAGAAAGGAATA+AGG | - | chr6_2:71549203-71549222 | None:intergenic | 40.0% | |
| GCAACTTCCAAGTCCTTATT+TGG | + | chr6_2:71549220-71549239 | Msa0927290:intron | 40.0% | |
| ! | TAAAGGGCAAGTTGAACCAA+AGG | - | chr6_2:71549669-71549688 | None:intergenic | 40.0% |
| ATCCAAAAGTGATTTGACGC+AGG | + | chr6_2:71550042-71550061 | Msa0927290:CDS | 40.0% | |
| ! | AACCTGCGTCAAATCACTTT+TGG | - | chr6_2:71550047-71550066 | None:intergenic | 40.0% |
| ! | AAGAAAGGGTGCATCAAGAA+AGG | + | chr6_2:71550139-71550158 | Msa0927290:intron | 40.0% |
| ! | AGAAAGGGTGCATCAAGAAA+GGG | + | chr6_2:71550140-71550159 | Msa0927290:intron | 40.0% |
| GCACTAGAGAGATATGATGC+AGG | + | chr6_2:71546912-71546931 | Msa0927290:CDS | 45.0% | |
| CTAGAGAGATATGATGCAGG+TGG | + | chr6_2:71546915-71546934 | Msa0927290:CDS | 45.0% | |
| TCAACAAGTATGTCGGACTC+CGG | + | chr6_2:71546954-71546973 | Msa0927290:intron | 45.0% | |
| !! | GATCATCTGTGATGGGGTTT+TGG | + | chr6_2:71547141-71547160 | Msa0927290:intron | 45.0% |
| CAGCACTTCAGTGTATCACT+AGG | + | chr6_2:71547811-71547830 | Msa0927290:intron | 45.0% | |
| AAGCTGCAGAAATTGTTGGC+GGG | + | chr6_2:71548182-71548201 | Msa0927290:intron | 45.0% | |
| AGGCTTGAACAACAGTGTTG+AGG | - | chr6_2:71548623-71548642 | None:intergenic | 45.0% | |
| ! | ACCGAAGGGTTTAGGGTTTA+AGG | - | chr6_2:71548941-71548960 | None:intergenic | 45.0% |
| TGGAAGTTGCACCTCAAGAA+AGG | - | chr6_2:71549210-71549229 | None:intergenic | 45.0% | |
| ! | ACTTTGTGTGGCGTTTGTTG+TGG | + | chr6_2:71549310-71549329 | Msa0927290:intron | 45.0% |
| !! | CTTTGTGTGGCGTTTGTTGT+GGG | + | chr6_2:71549311-71549330 | Msa0927290:intron | 45.0% |
| AGTGGTTATGCAATGGATGC+AGG | + | chr6_2:71549963-71549982 | Msa0927290:intron | 45.0% | |
| GCTCAGCACTATGAGTTTGA+TGG | + | chr6_2:71550297-71550316 | Msa0927290:intron | 45.0% | |
| AATGCAGCACAAGCAAGTGA+AGG | + | chr6_2:71550522-71550541 | Msa0927290:CDS | 45.0% | |
| ATGCAGCACAAGCAAGTGAA+GGG | + | chr6_2:71550523-71550542 | Msa0927290:CDS | 45.0% | |
| AAGGGCAGAGAATGCAACTT+TGG | + | chr6_2:71550711-71550730 | Msa0927290:CDS | 45.0% | |
| AGGGCAGAGAATGCAACTTT+GGG | + | chr6_2:71550712-71550731 | Msa0927290:CDS | 45.0% | |
| !!! | TTTTTTTTAATTATACTTAT+TGG | + | chr6_2:71547182-71547201 | Msa0927290:intron | 5.0% |
| !!! | TCATTTTAATAATTTTTAAT+AGG | + | chr6_2:71547629-71547648 | Msa0927290:intron | 5.0% |
| AAATGCAGCCAATCCACAGC+CGG | - | chr6_2:71546976-71546995 | None:intergenic | 50.0% | |
| TGCAGAAATTGTTGGCGGGA+AGG | + | chr6_2:71548186-71548205 | Msa0927290:intron | 50.0% | |
| AAATCCCCATCATCGCGCAT+AGG | - | chr6_2:71550016-71550035 | None:intergenic | 50.0% | |
| GCACCCTTTCTTCCCTGATA+TGG | - | chr6_2:71550131-71550150 | None:intergenic | 50.0% | |
| GCAGAGAATGCAACTTTGGG+AGG | + | chr6_2:71550715-71550734 | Msa0927290:CDS | 50.0% | |
| GATGGCCTATGCGCGATGAT+GGG | + | chr6_2:71550008-71550027 | Msa0927290:CDS | 55.0% | |
| ATGGCCTATGCGCGATGATG+GGG | + | chr6_2:71550009-71550028 | Msa0927290:CDS | 55.0% | |
| AGTATGTCGGACTCCGGCTG+TGG | + | chr6_2:71546960-71546979 | Msa0927290:intron | 60.0% | |
| CTCCACCATGACACGATGCG+CGG | - | chr6_2:71547285-71547304 | None:intergenic | 60.0% | |
| GGATGGCCTATGCGCGATGA+TGG | + | chr6_2:71550007-71550026 | Msa0927290:CDS | 60.0% | |
| GTCGGACTCCGGCTGTGGAT+TGG | + | chr6_2:71546965-71546984 | Msa0927290:intron | 65.0% | |
| TCGGGCCGCGCATCGTGTCA+TGG | + | chr6_2:71547277-71547296 | Msa0927290:intron | 70.0% | |
| GGCCGCGCATCGTGTCATGG+TGG | + | chr6_2:71547280-71547299 | Msa0927290:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 71546882 | 71550870 | 71546882 | ID=Msa0927290;Name=Msa0927290 |
| chr6_2 | mRNA | 71546882 | 71550870 | 71546882 | ID=Msa0927290-mRNA-1;Parent=Msa0927290;Name=Msa0927290-mRNA-1;_AED=0.45;_eAED=0.55;_QI=0|0|0.16|1|0|0.16|6|0|154 |
| chr6_2 | exon | 71546882 | 71546960 | 71546882 | ID=Msa0927290-mRNA-1:exon:11894;Parent=Msa0927290-mRNA-1 |
| chr6_2 | exon | 71547957 | 71547963 | 71547957 | ID=Msa0927290-mRNA-1:exon:11895;Parent=Msa0927290-mRNA-1 |
| chr6_2 | exon | 71549985 | 71550063 | 71549985 | ID=Msa0927290-mRNA-1:exon:11896;Parent=Msa0927290-mRNA-1 |
| chr6_2 | exon | 71550217 | 71550222 | 71550217 | ID=Msa0927290-mRNA-1:exon:11897;Parent=Msa0927290-mRNA-1 |
| chr6_2 | exon | 71550513 | 71550594 | 71550513 | ID=Msa0927290-mRNA-1:exon:11898;Parent=Msa0927290-mRNA-1 |
| chr6_2 | exon | 71550659 | 71550870 | 71550659 | ID=Msa0927290-mRNA-1:exon:11899;Parent=Msa0927290-mRNA-1 |
| chr6_2 | CDS | 71546882 | 71546960 | 71546882 | ID=Msa0927290-mRNA-1:cds;Parent=Msa0927290-mRNA-1 |
| chr6_2 | CDS | 71547957 | 71547963 | 71547957 | ID=Msa0927290-mRNA-1:cds;Parent=Msa0927290-mRNA-1 |
| chr6_2 | CDS | 71549985 | 71550063 | 71549985 | ID=Msa0927290-mRNA-1:cds;Parent=Msa0927290-mRNA-1 |
| chr6_2 | CDS | 71550217 | 71550222 | 71550217 | ID=Msa0927290-mRNA-1:cds;Parent=Msa0927290-mRNA-1 |
| chr6_2 | CDS | 71550513 | 71550594 | 71550513 | ID=Msa0927290-mRNA-1:cds;Parent=Msa0927290-mRNA-1 |
| chr6_2 | CDS | 71550659 | 71550870 | 71550659 | ID=Msa0927290-mRNA-1:cds;Parent=Msa0927290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
