AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1089250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1089250 MtrunA17_Chr2g0329911 99.187 861 7 0 1 861 1 861 0.0 1770
Msa1089250 MtrunA17_Chr2g0329901 75.173 866 207 3 1 861 1 863 0.0 1369
Msa1089250 MtrunA17_Chr8g0342881 75.501 849 206 2 14 861 9 856 0.0 1353
Msa1089250 MtrunA17_Chr8g0343021 71.065 864 239 3 7 861 3 864 0.0 1284
Msa1089250 MtrunA17_Chr8g0342951 71.346 869 240 3 1 861 1 868 0.0 1283
Msa1089250 MtrunA17_Chr8g0343031 71.445 865 235 5 7 861 3 865 0.0 1276
Msa1089250 MtrunA17_Chr8g0344211 69.965 869 252 3 1 861 1 868 0.0 1274
Msa1089250 MtrunA17_Chr5g0406871 70.473 867 242 5 7 861 3 867 0.0 1269
Msa1089250 MtrunA17_Chr8g0342971 70.149 871 249 6 1 861 1 870 0.0 1269
Msa1089250 MtrunA17_Chr8g0343011 70.034 871 245 3 1 861 1 865 0.0 1266
Msa1089250 MtrunA17_Chr8g0342891 69.222 861 258 4 6 861 3 861 0.0 1257
Msa1089250 MtrunA17_Chr8g0342921 67.995 878 255 6 1 861 1 869 0.0 1234
Msa1089250 MtrunA17_Chr3g0120071 65.349 860 287 6 8 861 4 858 0.0 1171
Msa1089250 MtrunA17_Chr8g0342931 71.238 751 214 2 112 861 1 750 0.0 1122
Msa1089250 MtrunA17_Chr1g0191921 62.457 871 300 8 1 861 5 858 0.0 1117
Msa1089250 MtrunA17_Chr8g0342901 63.152 863 268 9 9 861 6 828 0.0 1107
Msa1089250 MtrunA17_Chr7g0272791 59.456 883 320 11 1 861 1 867 0.0 1065
Msa1089250 MtrunA17_Chr1g0205611 56.552 870 345 10 9 861 3 856 0.0 1012
Msa1089250 MtrunA17_Chr8g0343001 58.178 856 303 8 9 861 4 807 0.0 998
Msa1089250 MtrunA17_Chr8g0342991 57.643 857 306 10 9 861 4 807 0.0 989
Msa1089250 MtrunA17_Chr8g0342981 58.293 820 295 11 58 861 35 823 0.0 942
Msa1089250 MtrunA17_Chr8g0344201 46.036 845 434 14 29 860 91 926 0.0 736
Msa1089250 MtrunA17_Chr8g0377101 44.811 819 427 14 57 861 109 916 0.0 690
Msa1089250 MtrunA17_Chr3g0118651 42.361 864 451 15 11 861 74 903 0.0 681
Msa1089250 MtrunA17_Chr3g0118641 41.744 860 466 15 19 861 61 902 0.0 667
Msa1089250 MtrunA17_Chr8g0338451 42.561 820 430 15 50 844 47 850 0.0 656
Msa1089250 MtrunA17_Chr4g0047281 41.383 824 436 14 53 860 102 894 0.0 627
Msa1089250 MtrunA17_Chr4g0033171 45.698 709 371 9 161 861 23 725 0.0 625
Msa1089250 MtrunA17_Chr3g0118621 43.693 769 411 11 106 861 106 865 0.0 615
Msa1089250 MtrunA17_Chr8g0344241 70.886 395 114 1 468 861 67 461 0.0 585
Msa1089250 MtrunA17_Chr8g0344241 50.685 73 29 2 287 359 9 74 2.76e-12 70.1
Msa1089250 MtrunA17_Chr6g0471951 40.426 517 261 7 316 827 11 485 4.61e-132 404
Msa1089250 MtrunA17_Chr7g0218231 59.829 117 46 1 516 631 16 132 3.25e-41 147
Msa1089250 MtrunA17_Chr6g0468081 53.933 89 40 1 544 631 1 89 2.28e-25 100
Msa1089250 MtrunA17_Chr3g0137991 48.413 126 46 3 738 861 1 109 3.52e-25 100
Msa1089250 MtrunA17_Chr2g0277191 58.333 60 24 1 735 794 58 116 1.44e-17 79.7
Msa1089250 MtrunA17_Chr7g0272781 54.839 62 28 0 754 815 8 69 2.75e-17 77.8
Msa1089250 MtrunA17_Chr4g0047271 42.857 91 51 1 771 860 1 91 7.40e-16 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1089250 AT1G55020.1 60.182 879 312 10 1 861 1 859 0.0 1079
Msa1089250 AT3G22400.1 57.077 869 336 10 14 861 34 886 0.0 1019
Msa1089250 AT1G72520.1 45.255 822 431 11 50 861 114 926 0.0 721
Msa1089250 AT1G17420.1 44.289 858 445 13 14 861 85 919 0.0 712
Msa1089250 AT3G45140.1 43.705 826 427 19 50 861 95 896 0.0 662
Msa1089250 AT1G67560.1 44.161 822 427 14 57 861 111 917 0.0 658
Msa1089250 AT3G45140.2 45.229 765 393 15 110 861 3 754 0.0 650

Find 199 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATTTCCAAACTTCTTAA+AGG 0.131647 7_3:-2602024 None:intergenic
CTTCATGCAGCTGTTAATTT+TGG 0.135058 7_3:+2601747 Msa1089250:CDS
GCTTGGAAAGGCTACCTTTC+TGG 0.147026 7_3:+2598948 Msa1089250:CDS
GTCTTGGACCCATGTCTTTA+TGG 0.177320 7_3:-2601541 None:intergenic
GAAGTTTAACCTTTCCTATT+TGG 0.185897 7_3:-2599617 None:intergenic
TATGATGTCTACAATGATTT+AGG 0.198014 7_3:+2599503 Msa1089250:CDS
ACTCAATAATGCCATATTTA+AGG 0.200843 7_3:+2600693 Msa1089250:CDS
AGGATACAAAAGTTTATAAA+TGG 0.201433 7_3:-2601110 None:intergenic
TCGATAAGTGTCTGAAATTT+TGG 0.216610 7_3:-2601900 None:intergenic
CTCATGATGGATTAGATATA+TGG 0.224741 7_3:+2601514 Msa1089250:CDS
CTTCTAAAGTTTACAAGAAT+TGG 0.234179 7_3:+2601242 Msa1089250:CDS
TCTTCACGAGCTTGCATCTT+AGG 0.236547 7_3:-2601681 None:intergenic
GATAATCTTACTGCTTTCTT+AGG 0.245074 7_3:+2596742 Msa1089250:CDS
ACCAGTGTTGGTGGAGTTAT+TGG 0.257398 7_3:+2596688 Msa1089250:CDS
GAAATACCTTGAAGTACTTT+AGG 0.278008 7_3:-2600065 None:intergenic
TTAGAGGCCTTTAAGAAGTT+TGG 0.281957 7_3:+2602017 Msa1089250:CDS
ACTGTGAGCCCTTCTAAATT+AGG 0.288323 7_3:-2600515 None:intergenic
GAGTTTATTCGCCTTAAATA+TGG 0.300979 7_3:-2600704 None:intergenic
TCTTCTCTGTAATGGACTAA+TGG 0.308219 7_3:-2599416 None:intergenic
CTTCCAAGAGATGAAGCTTT+TGG 0.309488 7_3:+2599792 Msa1089250:CDS
AATAGGGGTCATAAGATAAA+AGG 0.310068 7_3:+2596619 Msa1089250:CDS
AAGTAGATGCTTCCATGATT+TGG 0.311647 7_3:-2599129 None:intergenic
ATTAGGTTCTAGGTGTTCTT+TGG 0.320520 7_3:-2600498 None:intergenic
GCCCTTCTAAATTAGGTTCT+AGG 0.324988 7_3:-2600508 None:intergenic
CCAATTCTTCTTCTCTGTAA+TGG 0.332097 7_3:-2599424 None:intergenic
CTTCAGATAGAGATACTATT+AGG 0.343809 7_3:-2602179 None:intergenic
GATAGCTTTGATGAAGTTCA+TGG 0.345965 7_3:+2599927 Msa1089250:CDS
CACCTAGAACCTAATTTAGA+AGG 0.346924 7_3:+2600506 Msa1089250:CDS
GAAGGATGAAGCAAAGTATA+AGG 0.351751 7_3:-2602125 None:intergenic
TGCCTGCTGATCTTATAAAA+AGG 0.357335 7_3:+2601284 Msa1089250:CDS
GGTCAAGGTTTCGACATTCT+TGG 0.358750 7_3:+2596709 Msa1089250:CDS
AATCATGCTCGTCCTGTTCT+TGG 0.365294 7_3:+2599545 Msa1089250:CDS
ATCAGATACAAGGGCATTAG+AGG 0.370748 7_3:+2602001 Msa1089250:CDS
TATTCAGCTGACCCTTTCTC+TGG 0.371851 7_3:-2601828 None:intergenic
CTTGTATCTGATGTCCAGTT+TGG 0.373343 7_3:-2601990 None:intergenic
TGAAGACAGCAGATCACATT+TGG 0.374523 7_3:-2600268 None:intergenic
GAAGAATTGGATAATTTAAG+AGG 0.378647 7_3:+2599437 Msa1089250:CDS
TGACCAAAAGCTTCATCTCT+TGG 0.391538 7_3:-2599795 None:intergenic
GCGGTCAAGTTTGTGGTGTT+TGG 0.393878 7_3:-2599178 None:intergenic
GAACTGGCAGAAAGCCAAAT+AGG 0.394315 7_3:+2599603 Msa1089250:CDS
GTTGATGAGAAAGAACGTTT+TGG 0.396705 7_3:+2596651 Msa1089250:CDS
GGATACAAAAGTTTATAAAT+GGG 0.397641 7_3:-2601109 None:intergenic
TCAAAGCTATCAAACTCATT+TGG 0.400263 7_3:-2599915 None:intergenic
TGACAGTACTATCTGGTTAC+TGG 0.400978 7_3:+2600880 Msa1089250:CDS
CGTGTATATATATACCTTGT+TGG 0.402484 7_3:-2599211 None:intergenic
GATGATGACATGGGAATTCC+TGG 0.404317 7_3:+2599039 Msa1089250:CDS
CCATTACAGAGAAGAAGAAT+TGG 0.410502 7_3:+2599424 Msa1089250:CDS
AAGTTTGCACTACTGTCATA+TGG 0.411943 7_3:+2601712 Msa1089250:CDS
GTGTGGCAAACTCAACTCTA+TGG 0.415566 7_3:-2600798 None:intergenic
GTTTATCAACCCGCGCTAGA+AGG 0.415970 7_3:+2600854 Msa1089250:CDS
TCTAATCCATCATGAGCATA+AGG 0.416079 7_3:-2601507 None:intergenic
CAAGTTCTTTCCACCAAGCT+TGG 0.416248 7_3:-2601617 None:intergenic
AAATGTGATCTGCTGTCTTC+AGG 0.419247 7_3:+2600270 Msa1089250:CDS
ATTTCTTTGAGCACAGGTAA+TGG 0.423088 7_3:-2600002 None:intergenic
GTAAGTCCTTCCTCACTAGA+AGG 0.433641 7_3:-2602143 None:intergenic
TTTGCAAGAGAAATGCTTGC+TGG 0.439835 7_3:+2600238 Msa1089250:CDS
AAGCTAGATAGTCAAGTCTA+TGG 0.439854 7_3:+2600455 Msa1089250:CDS
CCACCACCTAAAGTACTTCA+AGG 0.442382 7_3:+2600059 Msa1089250:CDS
TACAAGAATTGGACTTTGCC+AGG 0.442800 7_3:+2601253 Msa1089250:CDS
CTACAATGATTTAGGAAATC+CGG 0.445050 7_3:+2599511 Msa1089250:CDS
CTTGAAGACATTCCAAATCA+TGG 0.449276 7_3:+2599117 Msa1089250:CDS
GGGTGACGGGGATATTGAAT+AGG 0.449380 7_3:+2596602 Msa1089250:CDS
TAAACTGTTATTTAGAGGAA+TGG 0.452635 7_3:+2601431 Msa1089250:intron
GGTGACGGGGATATTGAATA+GGG 0.454200 7_3:+2596603 Msa1089250:CDS
AATTTAAGAGGAGATGGAAC+AGG 0.457209 7_3:+2599449 Msa1089250:CDS
TTGGATAATTTAAGAGGAGA+TGG 0.457945 7_3:+2599443 Msa1089250:CDS
ATTACCTCGTTACCAACATT+GGG 0.468046 7_3:+2598979 Msa1089250:CDS
CGAAAGATTTCTTTGAGCAC+AGG 0.468335 7_3:-2600008 None:intergenic
TTCTCTTGCTCGACAATCCC+TGG 0.469936 7_3:+2601159 Msa1089250:CDS
AAAGTATAAGGCATCTGAAC+CGG 0.470881 7_3:-2602113 None:intergenic
CATGCTCGTCCTGTTCTTGG+AGG 0.471870 7_3:+2599548 Msa1089250:CDS
AGGAGATTCATGCCAGAGAA+AGG 0.472743 7_3:+2601816 Msa1089250:CDS
GCACCATGTTCATCTCCGTC+AGG 0.473569 7_3:-2600821 None:intergenic
TCTACTTTGTATGCAACTCC+TGG 0.474359 7_3:+2599145 Msa1089250:CDS
AATTACCTCGTTACCAACAT+TGG 0.475554 7_3:+2598978 Msa1089250:CDS
TCATCAGACCCTCCAAGAAC+AGG 0.477028 7_3:-2599557 None:intergenic
GAGAGAGAGACAATCCAAAC+TGG 0.477917 7_3:+2601976 Msa1089250:CDS
TGGTGTTAAGCTTGTGGTAG+AGG 0.478787 7_3:+2601479 Msa1089250:CDS
TGATACCTCCATCGTTGACC+AGG 0.480839 7_3:-2601177 None:intergenic
CTGTTAGTTGCTATGACAAA+TGG 0.485866 7_3:-2601067 None:intergenic
CCTTGATAATATCTCTATAA+CGG 0.488021 7_3:-2601928 None:intergenic
TGAAGTTCATGGATTGTATG+AGG 0.488443 7_3:+2599938 Msa1089250:CDS
AGAAAATGCGGTCAAGTTTG+TGG 0.492571 7_3:-2599185 None:intergenic
CTTCATCCTTCTAGTGAGGA+AGG 0.493335 7_3:+2602137 Msa1089250:CDS
AAGATTACAGACTCTAATGC+TGG 0.496355 7_3:-2599876 None:intergenic
GCAAATGGAAAAGGGAAGCT+TGG 0.496407 7_3:+2598931 Msa1089250:intron
ATTTAGAGGAATGGCAATTG+AGG 0.498020 7_3:+2601440 Msa1089250:intron
TAAACCGTCCAACTCTTAGT+AGG 0.498943 7_3:+2601796 Msa1089250:CDS
GATTACCCTTATGCTCATGA+TGG 0.501130 7_3:+2601501 Msa1089250:CDS
TACTATCTGGTTACTGGCTA+AGG 0.505546 7_3:+2600886 Msa1089250:CDS
TGAATATCCTTATCCTCGTA+GGG 0.505776 7_3:+2599577 Msa1089250:CDS
TTATTAATTGAACAGTAAGT+AGG 0.507897 7_3:+2600191 Msa1089250:intron
ACCAATAACTCCACCAACAC+TGG 0.508894 7_3:-2596689 None:intergenic
GTTGGTGGAGTTATTGGTCA+AGG 0.511646 7_3:+2596694 Msa1089250:CDS
CGAGTAGCATAAGCCTTCGT+TGG 0.513089 7_3:-2600731 None:intergenic
CAAACTGGACATCAGATACA+AGG 0.515129 7_3:+2601991 Msa1089250:CDS
CCTTGAAGTACTTTAGGTGG+TGG 0.515750 7_3:-2600059 None:intergenic
ATCATCAACTTGTCAGCCAT+TGG 0.519374 7_3:+2600936 Msa1089250:CDS
ATAAATAGTTTAACCAGTGT+TGG 0.520445 7_3:+2596676 Msa1089250:CDS
TGACTATCTAGCTTGCTTCG+CGG 0.521367 7_3:-2600446 None:intergenic
AATAGTTTAACCAGTGTTGG+TGG 0.524770 7_3:+2596679 Msa1089250:CDS
TCATGATGGATTAGATATAT+GGG 0.524917 7_3:+2601515 Msa1089250:CDS
GCTAGTCAAAAGTCCACAAA+AGG 0.525330 7_3:+2601857 Msa1089250:CDS
GTGTTTGGCATTATAAATCC+AGG 0.526188 7_3:-2599163 None:intergenic
GCTGACAAGTTGATGATAGC+AGG 0.527862 7_3:-2600930 None:intergenic
CCGTTATAGAGATATTATCA+AGG 0.528835 7_3:+2601928 Msa1089250:CDS
ATTCTGAACTCCAAGCTTGG+TGG 0.533029 7_3:+2601607 Msa1089250:CDS
AAGGTGTTGACAGTACTATC+TGG 0.533260 7_3:+2600873 Msa1089250:CDS
GGAGATTCATGCCAGAGAAA+GGG 0.533470 7_3:+2601817 Msa1089250:CDS
CTAATCCATCATGAGCATAA+GGG 0.533765 7_3:-2601506 None:intergenic
ATGAATATCCTTATCCTCGT+AGG 0.539701 7_3:+2599576 Msa1089250:CDS
TGGAAAGAACTTGTAGAGGT+TGG 0.540154 7_3:+2601627 Msa1089250:CDS
TTGAGTCATGATGATCTAGC+AGG 0.544752 7_3:-2600676 None:intergenic
TTGGATTGTCTCTCTCTCCA+AGG 0.544752 7_3:-2601971 None:intergenic
TTCTTGATGTAAAATGCTCC+AGG 0.545064 7_3:-2599057 None:intergenic
TTAACACCACATGGGGAAGA+TGG 0.545155 7_3:-2601465 None:intergenic
GGTAATTATACCTTCCAGAA+AGG 0.548726 7_3:-2598962 None:intergenic
TGTTCATCTCCGTCAGGGTG+TGG 0.548827 7_3:-2600815 None:intergenic
AAGATTCTGAACTCCAAGCT+TGG 0.549849 7_3:+2601604 Msa1089250:CDS
TTTGGACAGTATTCCTATGG+TGG 0.549856 7_3:+2601765 Msa1089250:CDS
GTCACTGCTCAAGAAAAGGA+TGG 0.551825 7_3:-2600756 None:intergenic
GATTTAGGAAATCCGGAGAA+AGG 0.552556 7_3:+2599518 Msa1089250:CDS
GTTTAATATTAAACCACCAT+AGG 0.555608 7_3:-2601778 None:intergenic
TGACAAAACTTTGAAGCCAC+TGG 0.555755 7_3:+2600775 Msa1089250:CDS
AACTTTAGAAGACATTTCCA+TGG 0.557234 7_3:-2601230 None:intergenic
CCCATGTGGTGTTAAGCTTG+TGG 0.560091 7_3:+2601473 Msa1089250:CDS
ACCACAAGCTTAACACCACA+TGG 0.560657 7_3:-2601474 None:intergenic
AATAAACTCGACTCCAACGA+AGG 0.561264 7_3:+2600718 Msa1089250:CDS
AAAGAAATCTTTCGAACCGA+TGG 0.561372 7_3:+2600017 Msa1089250:CDS
ATCTTGCTAAGTACATCTGT+TGG 0.562012 7_3:-2599975 None:intergenic
GTCATCTGTGGTGTAGTACA+AGG 0.566258 7_3:-2601571 None:intergenic
CTGTAATGGACTAATGGAGC+CGG 0.568264 7_3:-2599410 None:intergenic
GCTTCTGATGAAGTGTACCT+TGG 0.568815 7_3:+2601954 Msa1089250:CDS
AATGGAGCCGGTGTTTCACT+AGG 0.568995 7_3:-2599398 None:intergenic
AGAAGGGCTCACAGTAGAAG+AGG 0.571068 7_3:+2600523 Msa1089250:CDS
TTTGTGGGGAAGATATTCCA+TGG 0.571326 7_3:+2601213 Msa1089250:CDS
GCTAAGACACCGTCTTGGAC+CGG 0.576095 7_3:+2602094 Msa1089250:CDS
GAGAAGCTAAGACACCGTCT+TGG 0.580287 7_3:+2602089 Msa1089250:CDS
TCGTTACCAACATTGGGAGC+AGG 0.580669 7_3:+2598985 Msa1089250:CDS
ATGCTCGTCCTGTTCTTGGA+GGG 0.582766 7_3:+2599549 Msa1089250:CDS
ACCTAGAACCTAATTTAGAA+GGG 0.587489 7_3:+2600507 Msa1089250:CDS
ATGAATCTCCTACTAAGAGT+TGG 0.587805 7_3:-2601804 None:intergenic
GAGAACGCAAAGAGTGGGAA+AGG 0.590166 7_3:+2599471 Msa1089250:CDS
CTTTAGGTGGTGGATACTTG+AGG 0.590324 7_3:-2600049 None:intergenic
ATAATATCTCTATAACGGAA+AGG 0.590956 7_3:-2601923 None:intergenic
CTGTCAACACCTTCTAGCGC+GGG 0.591310 7_3:-2600863 None:intergenic
GATTGTCCTGCTCCCAATGT+TGG 0.594856 7_3:-2598991 None:intergenic
TCAGCAGGCAATGCTTGACC+TGG 0.597933 7_3:-2601271 None:intergenic
GAACAGTAAGTAGGTCTGCA+TGG 0.598243 7_3:+2600200 Msa1089250:intron
CTATCTAGCTTGCTTCGCGG+AGG 0.598943 7_3:-2600443 None:intergenic
GAACAGGAGAACGCAAAGAG+TGG 0.600744 7_3:+2599465 Msa1089250:CDS
TATCTAGCTTGCTTCGCGGA+GGG 0.601690 7_3:-2600442 None:intergenic
CTTCAAGAGTCAAACTCACA+AGG 0.601849 7_3:-2599101 None:intergenic
CAGATCCTAAAAGTGAGAGT+AGG 0.603906 7_3:+2599754 Msa1089250:intron
GAAGTTCATGGATTGTATGA+GGG 0.604985 7_3:+2599939 Msa1089250:CDS
CGACAATCCCTGGTCAACGA+TGG 0.605478 7_3:+2601169 Msa1089250:CDS
CTTGAGGAACTGTTCACCAT+CGG 0.606084 7_3:-2600033 None:intergenic
GAAAGCAGTATCTCAAAATG+TGG 0.606848 7_3:+2599851 Msa1089250:CDS
ATACCTTGAAGTACTTTAGG+TGG 0.608053 7_3:-2600062 None:intergenic
GTTCATGGATTGTATGAGGG+TGG 0.608173 7_3:+2599942 Msa1089250:CDS
CACCCTGACGGAGATGAACA+TGG 0.612917 7_3:+2600818 Msa1089250:CDS
GATACAAAAGTTTATAAATG+GGG 0.613101 7_3:-2601108 None:intergenic
AGATTACAGACTCTAATGCT+GGG 0.615002 7_3:-2599875 None:intergenic
GGCAGAAAGCCAAATAGGAA+AGG 0.615902 7_3:+2599608 Msa1089250:CDS
TTTGCTTCATCCTTCTAGTG+AGG 0.617630 7_3:+2602133 Msa1089250:CDS
ATCTCCTACTAAGAGTTGGA+CGG 0.618286 7_3:-2601800 None:intergenic
GAACTTGTAGAGGTTGGTCA+TGG 0.619559 7_3:+2601633 Msa1089250:CDS
GTGACGGGGATATTGAATAG+GGG 0.620162 7_3:+2596604 Msa1089250:CDS
TGGAAAAGGGAAGCTTGGAA+AGG 0.620625 7_3:+2598936 Msa1089250:CDS
CACCATGTTCATCTCCGTCA+GGG 0.621638 7_3:-2600820 None:intergenic
CAATCCCTGGTCAACGATGG+AGG 0.623263 7_3:+2601172 Msa1089250:CDS
AGTACAAGGAGACATAGTCT+TGG 0.623306 7_3:-2601557 None:intergenic
AACAGGAGAACGCAAAGAGT+GGG 0.626268 7_3:+2599466 Msa1089250:CDS
ACTGTCAACACCTTCTAGCG+CGG 0.626642 7_3:-2600864 None:intergenic
ATATCTTCCTAGTGAAACAC+CGG 0.628847 7_3:+2599391 Msa1089250:CDS
TTGAGTTTGCCACACCCTGA+CGG 0.630643 7_3:+2600806 Msa1089250:CDS
TTGGTGGAAAGAACTTGTAG+AGG 0.633539 7_3:+2601623 Msa1089250:CDS
TATGGGCTGCCATAAAGACA+TGG 0.637221 7_3:+2601532 Msa1089250:CDS
CACAAGCTTAACACCACATG+GGG 0.639779 7_3:-2601472 None:intergenic
TGCTCCCAATGTTGGTAACG+AGG 0.641203 7_3:-2598983 None:intergenic
TTCATTGTATCACGATAGTG+AGG 0.644461 7_3:-2601130 None:intergenic
TTGTCTAAGTATGTCATCTG+TGG 0.645976 7_3:-2601583 None:intergenic
ATTAGTGCAACTAAACCTGA+TGG 0.649396 7_3:+2596787 Msa1089250:CDS
GGAAAGGCTACCTTTCTGGA+AGG 0.651708 7_3:+2598952 Msa1089250:CDS
GATACCTCCATCGTTGACCA+GGG 0.658313 7_3:-2601176 None:intergenic
CCACAAGCTTAACACCACAT+GGG 0.659696 7_3:-2601473 None:intergenic
GGGTCATAAGATAAAAGGAA+CGG 0.661938 7_3:+2596624 Msa1089250:CDS
CCTTGTTGGCAAAGAAAATG+CGG 0.665349 7_3:-2599197 None:intergenic
AATATCCTTATCCTCGTAGG+GGG 0.667235 7_3:+2599579 Msa1089250:CDS
GCATCTGAACCGGTCCAAGA+CGG 0.668784 7_3:-2602103 None:intergenic
AAACTCAACTCTATGGCCAG+TGG 0.669772 7_3:-2600791 None:intergenic
ATGGGCTGCCATAAAGACAT+GGG 0.671205 7_3:+2601533 Msa1089250:CDS
TTTGAATGGGATGATGACAT+GGG 0.675782 7_3:+2599030 Msa1089250:CDS
AAACTGGACATCAGATACAA+GGG 0.678771 7_3:+2601992 Msa1089250:CDS
TCAACTGAAGAGAAACAGAA+CGG 0.681236 7_3:-2596765 None:intergenic
GAATATCCTTATCCTCGTAG+GGG 0.688179 7_3:+2599578 Msa1089250:CDS
GCTTGCATCTTAGGCCACCA+CGG 0.690210 7_3:-2601672 None:intergenic
GAGGATCCATCTTCCCCATG+TGG 0.690379 7_3:+2601459 Msa1089250:CDS
TCATAAGATAAAAGGAACGG+TGG 0.723426 7_3:+2596627 Msa1089250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAATTAAAAAATTGTA+TGG + chr7_3:2599363-2599382 Msa1089250:intron 10.0%
!!! AAAAAAAAAAAGTAGTTTTA+AGG - chr7_3:2600100-2600119 None:intergenic 10.0%
!! TTAATTATATTATAATCGTA+TGG + chr7_3:2600588-2600607 Msa1089250:intron 10.0%
!! ATAATTTACAAAGAAAAAGT+AGG - chr7_3:2596980-2596999 None:intergenic 15.0%
!!! ATTTATAAACTAGTTTATAG+CGG + chr7_3:2597249-2597268 Msa1089250:intron 15.0%
!!! TTAATTTGCTATATATAGTA+AGG + chr7_3:2597579-2597598 Msa1089250:intron 15.0%
!!! TAATTTGCTATATATAGTAA+GGG + chr7_3:2597580-2597599 Msa1089250:intron 15.0%
!!! TTTTAAAATGATTTGTGTTT+GGG - chr7_3:2597949-2597968 None:intergenic 15.0%
!!! ATTTTAAAATGATTTGTGTT+TGG - chr7_3:2597950-2597969 None:intergenic 15.0%
!!! TATTTATTTTTTCGGTAAAA+AGG - chr7_3:2598008-2598027 None:intergenic 15.0%
!! TTGTTTAAAAAACTGAAATA+CGG + chr7_3:2598620-2598639 Msa1089250:intron 15.0%
!!! CAAGTGTTTTTTTTTATATT+TGG + chr7_3:2598806-2598825 Msa1089250:intron 15.0%
!!! ATTCAAAATTCATTTTGAAT+GGG + chr7_3:2599017-2599036 Msa1089250:CDS 15.0%
!! TACCATATCATTTATTAATT+TGG + chr7_3:2599661-2599680 Msa1089250:intron 15.0%
!! TACCAAATTAATAAATGATA+TGG - chr7_3:2599666-2599685 None:intergenic 15.0%
!!! ACAATTGTATTTGATTTTAA+AGG + chr7_3:2600631-2600650 Msa1089250:intron 15.0%
!! ACATTATAATTAACATAGAA+AGG - chr7_3:2601397-2601416 None:intergenic 15.0%
!! ACCAGTAAACTAATTTATAA+CGG + chr7_3:2597209-2597228 Msa1089250:intron 20.0%
!! AAATACCTTCATATTTAATG+CGG + chr7_3:2597849-2597868 Msa1089250:intron 20.0%
!! TTTAACCCTTATAAGATTTA+AGG - chr7_3:2597875-2597894 None:intergenic 20.0%
!!! AAAAAGGAGAAGAATTTTAA+TGG - chr7_3:2597992-2598011 None:intergenic 20.0%
!!! ATATTTTAGTATACTTTGGT+GGG - chr7_3:2598045-2598064 None:intergenic 20.0%
!! TTTCTCATACCATTTATTAA+GGG - chr7_3:2598192-2598211 None:intergenic 20.0%
!!! CATTCAAAATTCATTTTGAA+TGG + chr7_3:2599016-2599035 Msa1089250:CDS 20.0%
!! TCATTACTAAATACTCATTT+AGG + chr7_3:2599283-2599302 Msa1089250:intron 20.0%
!! TAATTAAAAAATTGTATGGC+AGG + chr7_3:2599367-2599386 Msa1089250:intron 20.0%
!!! TCATTTATTAATTTGGTACT+TGG + chr7_3:2599668-2599687 Msa1089250:intron 20.0%
!! TTATTAATTGAACAGTAAGT+AGG + chr7_3:2600191-2600210 Msa1089250:intron 20.0%
!!! ATTTACAAAACTTTTACCAA+TGG - chr7_3:2600955-2600974 None:intergenic 20.0%
!! GATACAAAAGTTTATAAATG+GGG - chr7_3:2601111-2601130 None:intergenic 20.0%
!! GGATACAAAAGTTTATAAAT+GGG - chr7_3:2601112-2601131 None:intergenic 20.0%
!! AGGATACAAAAGTTTATAAA+TGG - chr7_3:2601113-2601132 None:intergenic 20.0%
!!! TATTATAGTTTTCGTATAAC+TGG + chr7_3:2601338-2601357 Msa1089250:intron 20.0%
! ATAAATAGTTTAACCAGTGT+TGG + chr7_3:2596676-2596695 Msa1089250:CDS 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG - chr7_3:2596888-2596907 None:intergenic 25.0%
! AAGTATAGTATAGTTGTAGA+TGG - chr7_3:2597060-2597079 None:intergenic 25.0%
! TATACTTTATGAGTGTCAAA+CGG + chr7_3:2597073-2597092 Msa1089250:intron 25.0%
!! CTTTGTTTGACAAAAAATAG+CGG + chr7_3:2597183-2597202 Msa1089250:intron 25.0%
!! TCCGTTATAAATTAGTTTAC+TGG - chr7_3:2597213-2597232 None:intergenic 25.0%
! TCAAGTGAAATGAGAAAAAT+AGG + chr7_3:2597377-2597396 Msa1089250:intron 25.0%
! GTTCAATTTCACTATAATGT+TGG - chr7_3:2597642-2597661 None:intergenic 25.0%
! AATTGAACTTGAATCTCTTA+TGG + chr7_3:2597654-2597673 Msa1089250:intron 25.0%
!!! TTATGGTTTGTTTGATTAGA+GGG + chr7_3:2597671-2597690 Msa1089250:intron 25.0%
!!! AGATCTTGTTCATTTTTTGA+GGG + chr7_3:2597738-2597757 Msa1089250:intron 25.0%
!!! CATATTTTAGTATACTTTGG+TGG - chr7_3:2598046-2598065 None:intergenic 25.0%
!!! CCACATATTTTAGTATACTT+TGG - chr7_3:2598049-2598068 None:intergenic 25.0%
! CCAAAGTATACTAAAATATG+TGG + chr7_3:2598046-2598065 Msa1089250:intron 25.0%
! ACAAAAATGCCCTTAATAAA+TGG + chr7_3:2598180-2598199 Msa1089250:intron 25.0%
! CTTTCTCATACCATTTATTA+AGG - chr7_3:2598193-2598212 None:intergenic 25.0%
!! TCTAAAGTGACTCATAATTT+CGG + chr7_3:2598324-2598343 Msa1089250:intron 25.0%
!!! TAAACACTTGTTATTGTGTT+TGG - chr7_3:2598410-2598429 None:intergenic 25.0%
!! GAAATACGGAATTTGAAATT+TGG + chr7_3:2598634-2598653 Msa1089250:intron 25.0%
!!! TTGGCTTTTACTAATAATGT+TGG + chr7_3:2598825-2598844 Msa1089250:intron 25.0%
!!! GTTTTGATTTTGTTAGCAAA+TGG + chr7_3:2598916-2598935 Msa1089250:intron 25.0%
!! ATTTTGTTAGCAAATGGAAA+AGG + chr7_3:2598922-2598941 Msa1089250:intron 25.0%
!! TTTTGTTAGCAAATGGAAAA+GGG + chr7_3:2598923-2598942 Msa1089250:intron 25.0%
! GAAGAATTGGATAATTTAAG+AGG + chr7_3:2599437-2599456 Msa1089250:CDS 25.0%
! TATGATGTCTACAATGATTT+AGG + chr7_3:2599503-2599522 Msa1089250:CDS 25.0%
!! TCATCAGATTTTCTTACTTA+TGG + chr7_3:2599825-2599844 Msa1089250:CDS 25.0%
! ACTCAATAATGCCATATTTA+AGG + chr7_3:2600693-2600712 Msa1089250:CDS 25.0%
!! TCTTGATTCTTGATGATAAT+AGG + chr7_3:2601020-2601039 Msa1089250:intron 25.0%
!! TCATCGAAAAAACATTTTTG+TGG + chr7_3:2601197-2601216 Msa1089250:CDS 25.0%
!! CATCGAAAAAACATTTTTGT+GGG + chr7_3:2601198-2601217 Msa1089250:CDS 25.0%
!! ATCGAAAAAACATTTTTGTG+GGG + chr7_3:2601199-2601218 Msa1089250:CDS 25.0%
!!! CTTCTAAAGTTTACAAGAAT+TGG + chr7_3:2601242-2601261 Msa1089250:CDS 25.0%
!! ATAGAAAGGTCTTTAAGTTT+AGG - chr7_3:2601383-2601402 None:intergenic 25.0%
!! GTTTGTAAACTGTTATTTAG+AGG + chr7_3:2601426-2601445 Msa1089250:intron 25.0%
!! TAAACTGTTATTTAGAGGAA+TGG + chr7_3:2601431-2601450 Msa1089250:intron 25.0%
!!! TCATGATGGATTAGATATAT+GGG + chr7_3:2601515-2601534 Msa1089250:CDS 25.0%
! GTTTAATATTAAACCACCAT+AGG - chr7_3:2601781-2601800 None:intergenic 25.0%
!! ATAATATCTCTATAACGGAA+AGG - chr7_3:2601926-2601945 None:intergenic 25.0%
!! CCTTGATAATATCTCTATAA+CGG - chr7_3:2601931-2601950 None:intergenic 25.0%
! CTTATTTCCAAACTTCTTAA+AGG - chr7_3:2602027-2602046 None:intergenic 25.0%
AATAGGGGTCATAAGATAAA+AGG + chr7_3:2596619-2596638 Msa1089250:CDS 30.0%
GATAATCTTACTGCTTTCTT+AGG + chr7_3:2596742-2596761 Msa1089250:CDS 30.0%
TGTTCAAATATCATTTCTCG+AGG - chr7_3:2596864-2596883 None:intergenic 30.0%
TTATTTGAACAACCATTTGG+TGG - chr7_3:2597021-2597040 None:intergenic 30.0%
!! GTGTTATTTGAACAACCATT+TGG - chr7_3:2597024-2597043 None:intergenic 30.0%
TATAGTATAGTTGTAGATGG+AGG - chr7_3:2597057-2597076 None:intergenic 30.0%
!! CTTATGGTTTGTTTGATTAG+AGG + chr7_3:2597670-2597689 Msa1089250:intron 30.0%
!! TATGGTTTGTTTGATTAGAG+GGG + chr7_3:2597672-2597691 Msa1089250:intron 30.0%
!!! GAGATCTTGTTCATTTTTTG+AGG + chr7_3:2597737-2597756 Msa1089250:intron 30.0%
!!! GATCTTGTTCATTTTTTGAG+GGG + chr7_3:2597739-2597758 Msa1089250:intron 30.0%
! AAGCTAATTTTATCTCCCTT+TGG + chr7_3:2597787-2597806 Msa1089250:intron 30.0%
! TAATTTTATCTCCCTTTGGA+AGG + chr7_3:2597791-2597810 Msa1089250:intron 30.0%
!! AATTTTATCTCCCTTTGGAA+GGG + chr7_3:2597792-2597811 Msa1089250:intron 30.0%
!!! AGAGGGGAAATTTTAATTGA+AGG - chr7_3:2597916-2597935 None:intergenic 30.0%
!! AGGAGAAGAATTTTAATGGT+GGG - chr7_3:2597988-2598007 None:intergenic 30.0%
!! AAGGAGAAGAATTTTAATGG+TGG - chr7_3:2597989-2598008 None:intergenic 30.0%
AAGCGTCATATAATTTGAGA+CGG - chr7_3:2598092-2598111 None:intergenic 30.0%
!! CTAAAGTGTAAGTAGTTTTG+GGG - chr7_3:2598362-2598381 None:intergenic 30.0%
! CCTAAAGTGTAAGTAGTTTT+GGG - chr7_3:2598363-2598382 None:intergenic 30.0%
! TCCTAAAGTGTAAGTAGTTT+TGG - chr7_3:2598364-2598383 None:intergenic 30.0%
! AAACTACTTACACTTTAGGA+CGG + chr7_3:2598364-2598383 Msa1089250:intron 30.0%
! GGTTCAGATAACAATTTGTT+TGG - chr7_3:2598440-2598459 None:intergenic 30.0%
ATTGAAAGAAAACAAGACAG+AGG + chr7_3:2598487-2598506 Msa1089250:intron 30.0%
CGTGTATATATATACCTTGT+TGG - chr7_3:2599214-2599233 None:intergenic 30.0%
ATATATACACGTGATTAACC+AGG + chr7_3:2599223-2599242 Msa1089250:intron 30.0%
ACACAGGTGTATGAAAAATT+AGG + chr7_3:2599250-2599269 Msa1089250:intron 30.0%
ATTATCTTCCTCGTGATTTA+TGG - chr7_3:2599351-2599370 None:intergenic 30.0%
TTGGATAATTTAAGAGGAGA+TGG + chr7_3:2599443-2599462 Msa1089250:CDS 30.0%
CTACAATGATTTAGGAAATC+CGG + chr7_3:2599511-2599530 Msa1089250:CDS 30.0%
GAAGTTTAACCTTTCCTATT+TGG - chr7_3:2599620-2599639 None:intergenic 30.0%
TCAAAGCTATCAAACTCATT+TGG - chr7_3:2599918-2599937 None:intergenic 30.0%
! GAAATACCTTGAAGTACTTT+AGG - chr7_3:2600068-2600087 None:intergenic 30.0%
!! AGATCCAAAAGCACTTAATA+GGG - chr7_3:2600135-2600154 None:intergenic 30.0%
ACTACTCTAAACCAAAAAGT+TGG + chr7_3:2600317-2600336 Msa1089250:intron 30.0%
! GCAAAGAAAATCCAACTTTT+TGG - chr7_3:2600331-2600350 None:intergenic 30.0%
GATCATTGTTTGGTTATTAC+AGG + chr7_3:2600415-2600434 Msa1089250:intron 30.0%
ACCTAGAACCTAATTTAGAA+GGG + chr7_3:2600507-2600526 Msa1089250:CDS 30.0%
GAGTTTATTCGCCTTAAATA+TGG - chr7_3:2600707-2600726 None:intergenic 30.0%
! AACTTTAGAAGACATTTCCA+TGG - chr7_3:2601233-2601252 None:intergenic 30.0%
! TACCTTTTTATAAGATCAGC+AGG - chr7_3:2601289-2601308 None:intergenic 30.0%
!! CTCATGATGGATTAGATATA+TGG + chr7_3:2601514-2601533 Msa1089250:CDS 30.0%
! AATTTTGGACAGTATTCCTA+TGG + chr7_3:2601762-2601781 Msa1089250:CDS 30.0%
!! TCGATAAGTGTCTGAAATTT+TGG - chr7_3:2601903-2601922 None:intergenic 30.0%
CCGTTATAGAGATATTATCA+AGG + chr7_3:2601928-2601947 Msa1089250:CDS 30.0%
GGGTCATAAGATAAAAGGAA+CGG + chr7_3:2596624-2596643 Msa1089250:CDS 35.0%
TCATAAGATAAAAGGAACGG+TGG + chr7_3:2596627-2596646 Msa1089250:CDS 35.0%
!! GTTGATGAGAAAGAACGTTT+TGG + chr7_3:2596651-2596670 Msa1089250:CDS 35.0%
! AATAGTTTAACCAGTGTTGG+TGG + chr7_3:2596679-2596698 Msa1089250:CDS 35.0%
TCAACTGAAGAGAAACAGAA+CGG - chr7_3:2596768-2596787 None:intergenic 35.0%
ATTAGTGCAACTAAACCTGA+TGG + chr7_3:2596787-2596806 Msa1089250:CDS 35.0%
!! GAAATGAAGAAAGTACCATC+AGG - chr7_3:2596805-2596824 None:intergenic 35.0%
GATCGAGAGAAAAAAACAGT+AGG + chr7_3:2597399-2597418 Msa1089250:intron 35.0%
!! ATTTTATCTCCCTTTGGAAG+GGG + chr7_3:2597793-2597812 Msa1089250:intron 35.0%
!!! CTTGAGTTGAGACTTTTTTG+AGG + chr7_3:2597825-2597844 Msa1089250:intron 35.0%
TAAGGCCGCATTAAATATGA+AGG - chr7_3:2597857-2597876 None:intergenic 35.0%
ATGCGGCCTTAAATCTTATA+AGG + chr7_3:2597866-2597885 Msa1089250:intron 35.0%
TGCGGCCTTAAATCTTATAA+GGG + chr7_3:2597867-2597886 Msa1089250:intron 35.0%
!! TGATTTGTGTTTGGGTTGAT+AGG - chr7_3:2597941-2597960 None:intergenic 35.0%
!! GGAGAAGAATTTTAATGGTG+GGG - chr7_3:2597987-2598006 None:intergenic 35.0%
TTTAGTATACTTTGGTGGGA+AGG - chr7_3:2598041-2598060 None:intergenic 35.0%
CCCAAAACTACTTACACTTT+AGG + chr7_3:2598360-2598379 Msa1089250:intron 35.0%
CACACTTACATGTATTGAGT+GGG - chr7_3:2598461-2598480 None:intergenic 35.0%
CAATACATGTAAGTGTGCTT+AGG + chr7_3:2598464-2598483 Msa1089250:intron 35.0%
TCACCAATTCCACACATTTA+TGG + chr7_3:2598538-2598557 Msa1089250:intron 35.0%
CTTCCATAAATGTGTGGAAT+TGG - chr7_3:2598544-2598563 None:intergenic 35.0%
AGACTTGCATCATATTCGTA+CGG - chr7_3:2598746-2598765 None:intergenic 35.0%
GGTAATTATACCTTCCAGAA+AGG - chr7_3:2598965-2598984 None:intergenic 35.0%
AATTACCTCGTTACCAACAT+TGG + chr7_3:2598978-2598997 Msa1089250:CDS 35.0%
ATTACCTCGTTACCAACATT+GGG + chr7_3:2598979-2598998 Msa1089250:CDS 35.0%
! TTTTGAATGGGATGATGACA+TGG + chr7_3:2599029-2599048 Msa1089250:CDS 35.0%
TTTGAATGGGATGATGACAT+GGG + chr7_3:2599030-2599049 Msa1089250:CDS 35.0%
TTCTTGATGTAAAATGCTCC+AGG - chr7_3:2599060-2599079 None:intergenic 35.0%
CTTGAAGACATTCCAAATCA+TGG + chr7_3:2599117-2599136 Msa1089250:CDS 35.0%
AAGTAGATGCTTCCATGATT+TGG - chr7_3:2599132-2599151 None:intergenic 35.0%
GTGTTTGGCATTATAAATCC+AGG - chr7_3:2599166-2599185 None:intergenic 35.0%
ACTTTAAGCCATAAATCACG+AGG + chr7_3:2599340-2599359 Msa1089250:intron 35.0%
ATATCTTCCTAGTGAAACAC+CGG + chr7_3:2599391-2599410 Msa1089250:CDS 35.0%
!! TCTTCTCTGTAATGGACTAA+TGG - chr7_3:2599419-2599438 None:intergenic 35.0%
CCAATTCTTCTTCTCTGTAA+TGG - chr7_3:2599427-2599446 None:intergenic 35.0%
CCATTACAGAGAAGAAGAAT+TGG + chr7_3:2599424-2599443 Msa1089250:CDS 35.0%
AATTTAAGAGGAGATGGAAC+AGG + chr7_3:2599449-2599468 Msa1089250:CDS 35.0%
ATGAATATCCTTATCCTCGT+AGG + chr7_3:2599576-2599595 Msa1089250:CDS 35.0%
TGAATATCCTTATCCTCGTA+GGG + chr7_3:2599577-2599596 Msa1089250:CDS 35.0%
GAAAGCAGTATCTCAAAATG+TGG + chr7_3:2599851-2599870 Msa1089250:CDS 35.0%
AGATTACAGACTCTAATGCT+GGG - chr7_3:2599878-2599897 None:intergenic 35.0%
AAGATTACAGACTCTAATGC+TGG - chr7_3:2599879-2599898 None:intergenic 35.0%
!! GATAGCTTTGATGAAGTTCA+TGG + chr7_3:2599927-2599946 Msa1089250:CDS 35.0%
! TGAAGTTCATGGATTGTATG+AGG + chr7_3:2599938-2599957 Msa1089250:CDS 35.0%
! GAAGTTCATGGATTGTATGA+GGG + chr7_3:2599939-2599958 Msa1089250:CDS 35.0%
ATCTTGCTAAGTACATCTGT+TGG - chr7_3:2599978-2599997 None:intergenic 35.0%
ATTTCTTTGAGCACAGGTAA+TGG - chr7_3:2600005-2600024 None:intergenic 35.0%
AAAGAAATCTTTCGAACCGA+TGG + chr7_3:2600017-2600036 Msa1089250:CDS 35.0%
! ATACCTTGAAGTACTTTAGG+TGG - chr7_3:2600065-2600084 None:intergenic 35.0%
!! GATCCAAAAGCACTTAATAG+GGG - chr7_3:2600134-2600153 None:intergenic 35.0%
!! GAGATCCAAAAGCACTTAAT+AGG - chr7_3:2600136-2600155 None:intergenic 35.0%
! TGTCATTAGTTCGATGGATT+TGG + chr7_3:2600378-2600397 Msa1089250:intron 35.0%
! GTCATTAGTTCGATGGATTT+GGG + chr7_3:2600379-2600398 Msa1089250:intron 35.0%
CTTCATGAAGGATCATTGTT+TGG + chr7_3:2600405-2600424 Msa1089250:intron 35.0%
AAGCTAGATAGTCAAGTCTA+TGG + chr7_3:2600455-2600474 Msa1089250:CDS 35.0%
!! ATTAGGTTCTAGGTGTTCTT+TGG - chr7_3:2600501-2600520 None:intergenic 35.0%
CACCTAGAACCTAATTTAGA+AGG + chr7_3:2600506-2600525 Msa1089250:CDS 35.0%
! TTTTGTCACTGCTCAAGAAA+AGG - chr7_3:2600763-2600782 None:intergenic 35.0%
CTGTTAGTTGCTATGACAAA+TGG - chr7_3:2601070-2601089 None:intergenic 35.0%
TTCATTGTATCACGATAGTG+AGG - chr7_3:2601133-2601152 None:intergenic 35.0%
TGCCTGCTGATCTTATAAAA+AGG + chr7_3:2601284-2601303 Msa1089250:CDS 35.0%
ATTTAGAGGAATGGCAATTG+AGG + chr7_3:2601440-2601459 Msa1089250:intron 35.0%
CTAATCCATCATGAGCATAA+GGG - chr7_3:2601509-2601528 None:intergenic 35.0%
TCTAATCCATCATGAGCATA+AGG - chr7_3:2601510-2601529 None:intergenic 35.0%
AAGTTTGCACTACTGTCATA+TGG + chr7_3:2601712-2601731 Msa1089250:CDS 35.0%
! CTTCATGCAGCTGTTAATTT+TGG + chr7_3:2601747-2601766 Msa1089250:CDS 35.0%
ATGAATCTCCTACTAAGAGT+TGG - chr7_3:2601807-2601826 None:intergenic 35.0%
AAACTGGACATCAGATACAA+GGG + chr7_3:2601992-2602011 Msa1089250:CDS 35.0%
! TTAGAGGCCTTTAAGAAGTT+TGG + chr7_3:2602017-2602036 Msa1089250:CDS 35.0%
! AAAGTATAAGGCATCTGAAC+CGG - chr7_3:2602116-2602135 None:intergenic 35.0%
GAAGGATGAAGCAAAGTATA+AGG - chr7_3:2602128-2602147 None:intergenic 35.0%
! CCATTTGGTGGACAACTTAT+GGG - chr7_3:2597009-2597028 None:intergenic 40.0%
! ACCATTTGGTGGACAACTTA+TGG - chr7_3:2597010-2597029 None:intergenic 40.0%
GTTGTAGATGGAGGAAATTG+AGG - chr7_3:2597048-2597067 None:intergenic 40.0%
ACTTTATGAGTGTCAAACGG+AGG + chr7_3:2597076-2597095 Msa1089250:intron 40.0%
CTTTATGAGTGTCAAACGGA+GGG + chr7_3:2597077-2597096 Msa1089250:intron 40.0%
TTTGATTAGAGGGGAGAAAG+AGG + chr7_3:2597681-2597700 Msa1089250:intron 40.0%
!!! TCATTTTTTGAGGGGAAGTG+AGG + chr7_3:2597747-2597766 Msa1089250:intron 40.0%
CAAAAACTTCCCCTTCCAAA+GGG - chr7_3:2597805-2597824 None:intergenic 40.0%
!! TTTGGGTTGATAGGATAGAG+GGG - chr7_3:2597932-2597951 None:intergenic 40.0%
!! GTTTGGGTTGATAGGATAGA+GGG - chr7_3:2597933-2597952 None:intergenic 40.0%
!! TGTTTGGGTTGATAGGATAG+AGG - chr7_3:2597934-2597953 None:intergenic 40.0%
!! GAAGAATTTTAATGGTGGGG+AGG - chr7_3:2597984-2598003 None:intergenic 40.0%
! CGTCATATAATTTGAGACGG+AGG - chr7_3:2598089-2598108 None:intergenic 40.0%
!! TACTTACACTTTAGGACGGA+GGG + chr7_3:2598368-2598387 Msa1089250:intron 40.0%
GCACACTTACATGTATTGAG+TGG - chr7_3:2598462-2598481 None:intergenic 40.0%
GTAGTGCTTCCATAAATGTG+TGG - chr7_3:2598550-2598569 None:intergenic 40.0%
!! TTATGGAAGCACTACGACAA+TGG + chr7_3:2598555-2598574 Msa1089250:intron 40.0%
TGCATTGAAGTATGAACCGT+CGG - chr7_3:2598596-2598615 None:intergenic 40.0%
CTTCAAGAGTCAAACTCACA+AGG - chr7_3:2599104-2599123 None:intergenic 40.0%
TCTACTTTGTATGCAACTCC+TGG + chr7_3:2599145-2599164 Msa1089250:CDS 40.0%
AGAAAATGCGGTCAAGTTTG+TGG - chr7_3:2599188-2599207 None:intergenic 40.0%
CCTTGTTGGCAAAGAAAATG+CGG - chr7_3:2599200-2599219 None:intergenic 40.0%
GATTTAGGAAATCCGGAGAA+AGG + chr7_3:2599518-2599537 Msa1089250:CDS 40.0%
! GCATGATTTTCACCTTTCTC+CGG - chr7_3:2599533-2599552 None:intergenic 40.0%
GAATATCCTTATCCTCGTAG+GGG + chr7_3:2599578-2599597 Msa1089250:CDS 40.0%
AATATCCTTATCCTCGTAGG+GGG + chr7_3:2599579-2599598 Msa1089250:CDS 40.0%
CAGATCCTAAAAGTGAGAGT+AGG + chr7_3:2599754-2599773 Msa1089250:intron 40.0%
!! TCACTCCTACTCTCACTTTT+AGG - chr7_3:2599762-2599781 None:intergenic 40.0%
! CTTCCAAGAGATGAAGCTTT+TGG + chr7_3:2599792-2599811 Msa1089250:CDS 40.0%
TGACCAAAAGCTTCATCTCT+TGG - chr7_3:2599798-2599817 None:intergenic 40.0%
CGAAAGATTTCTTTGAGCAC+AGG - chr7_3:2600011-2600030 None:intergenic 40.0%
! ATGCCCCTATTAAGTGCTTT+TGG + chr7_3:2600128-2600147 Msa1089250:intron 40.0%
TTTGCAAGAGAAATGCTTGC+TGG + chr7_3:2600238-2600257 Msa1089250:CDS 40.0%
TGAAGACAGCAGATCACATT+TGG - chr7_3:2600271-2600290 None:intergenic 40.0%
AAATGTGATCTGCTGTCTTC+AGG + chr7_3:2600270-2600289 Msa1089250:CDS 40.0%
GATCGATGTCATTAGTTCGA+TGG + chr7_3:2600372-2600391 Msa1089250:intron 40.0%
GCCCTTCTAAATTAGGTTCT+AGG - chr7_3:2600511-2600530 None:intergenic 40.0%
ACTGTGAGCCCTTCTAAATT+AGG - chr7_3:2600518-2600537 None:intergenic 40.0%
TTGAGTCATGATGATCTAGC+AGG - chr7_3:2600679-2600698 None:intergenic 40.0%
AATAAACTCGACTCCAACGA+AGG + chr7_3:2600718-2600737 Msa1089250:CDS 40.0%
!! TGACAAAACTTTGAAGCCAC+TGG + chr7_3:2600775-2600794 Msa1089250:CDS 40.0%
!! AAGGTGTTGACAGTACTATC+TGG + chr7_3:2600873-2600892 Msa1089250:CDS 40.0%
TGACAGTACTATCTGGTTAC+TGG + chr7_3:2600880-2600899 Msa1089250:CDS 40.0%
! TACTATCTGGTTACTGGCTA+AGG + chr7_3:2600886-2600905 Msa1089250:CDS 40.0%
ATCATCAACTTGTCAGCCAT+TGG + chr7_3:2600936-2600955 Msa1089250:CDS 40.0%
TTTGTGGGGAAGATATTCCA+TGG + chr7_3:2601213-2601232 Msa1089250:CDS 40.0%
TACAAGAATTGGACTTTGCC+AGG + chr7_3:2601253-2601272 Msa1089250:CDS 40.0%
GATTACCCTTATGCTCATGA+TGG + chr7_3:2601501-2601520 Msa1089250:CDS 40.0%
AGTACAAGGAGACATAGTCT+TGG - chr7_3:2601560-2601579 None:intergenic 40.0%
AAGATTCTGAACTCCAAGCT+TGG + chr7_3:2601604-2601623 Msa1089250:CDS 40.0%
TTGGTGGAAAGAACTTGTAG+AGG + chr7_3:2601623-2601642 Msa1089250:CDS 40.0%
TGGAAAGAACTTGTAGAGGT+TGG + chr7_3:2601627-2601646 Msa1089250:CDS 40.0%
TTTGGACAGTATTCCTATGG+TGG + chr7_3:2601765-2601784 Msa1089250:CDS 40.0%
TAAACCGTCCAACTCTTAGT+AGG + chr7_3:2601796-2601815 Msa1089250:CDS 40.0%
ATCTCCTACTAAGAGTTGGA+CGG - chr7_3:2601803-2601822 None:intergenic 40.0%
GCTAGTCAAAAGTCCACAAA+AGG + chr7_3:2601857-2601876 Msa1089250:CDS 40.0%
! GTCTTCAAGTATGCCTTTTG+TGG - chr7_3:2601873-2601892 None:intergenic 40.0%
CTTGTATCTGATGTCCAGTT+TGG - chr7_3:2601993-2602012 None:intergenic 40.0%
CAAACTGGACATCAGATACA+AGG + chr7_3:2601991-2602010 Msa1089250:CDS 40.0%
!! ATCAGATACAAGGGCATTAG+AGG + chr7_3:2602001-2602020 Msa1089250:CDS 40.0%
TTTGCTTCATCCTTCTAGTG+AGG + chr7_3:2602133-2602152 Msa1089250:CDS 40.0%
!! GAGGAAGGACTTACTTTTAG+AGG + chr7_3:2602152-2602171 Msa1089250:CDS 40.0%
!! GGTGACGGGGATATTGAATA+GGG + chr7_3:2596603-2596622 Msa1089250:CDS 45.0%
! GTGACGGGGATATTGAATAG+GGG + chr7_3:2596604-2596623 Msa1089250:CDS 45.0%
!! ACCAGTGTTGGTGGAGTTAT+TGG + chr7_3:2596688-2596707 Msa1089250:CDS 45.0%
ACCAATAACTCCACCAACAC+TGG - chr7_3:2596692-2596711 None:intergenic 45.0%
! GTTGGTGGAGTTATTGGTCA+AGG + chr7_3:2596694-2596713 Msa1089250:CDS 45.0%
GGTCAAGGTTTCGACATTCT+TGG + chr7_3:2596709-2596728 Msa1089250:CDS 45.0%
CCCATAAGTTGTCCACCAAA+TGG + chr7_3:2597006-2597025 Msa1089250:intron 45.0%
GCAAAAACTTCCCCTTCCAA+AGG - chr7_3:2597806-2597825 None:intergenic 45.0%
!! CTACTTACACTTTAGGACGG+AGG + chr7_3:2598367-2598386 Msa1089250:intron 45.0%
AGCACTACGACAATGGTTGT+TGG + chr7_3:2598562-2598581 Msa1089250:intron 45.0%
GTTGTTGGATCAAGATCCGA+CGG + chr7_3:2598577-2598596 Msa1089250:intron 45.0%
TTTATGCACTCTGCGTACGT+TGG - chr7_3:2598691-2598710 None:intergenic 45.0%
GCATCATATTCGTACGGACT+TGG - chr7_3:2598740-2598759 None:intergenic 45.0%
GCAAATGGAAAAGGGAAGCT+TGG + chr7_3:2598931-2598950 Msa1089250:intron 45.0%
TGGAAAAGGGAAGCTTGGAA+AGG + chr7_3:2598936-2598955 Msa1089250:CDS 45.0%
GATGATGACATGGGAATTCC+TGG + chr7_3:2599039-2599058 Msa1089250:CDS 45.0%
! CCGCATTTTCTTTGCCAACA+AGG + chr7_3:2599197-2599216 Msa1089250:CDS 45.0%
! TGATTAACCAGGTGTCACAC+AGG + chr7_3:2599234-2599253 Msa1089250:intron 45.0%
!! CTGTAATGGACTAATGGAGC+CGG - chr7_3:2599413-2599432 None:intergenic 45.0%
AACAGGAGAACGCAAAGAGT+GGG + chr7_3:2599466-2599485 Msa1089250:CDS 45.0%
AATCATGCTCGTCCTGTTCT+TGG + chr7_3:2599545-2599564 Msa1089250:CDS 45.0%
GAACTGGCAGAAAGCCAAAT+AGG + chr7_3:2599603-2599622 Msa1089250:CDS 45.0%
GGCAGAAAGCCAAATAGGAA+AGG + chr7_3:2599608-2599627 Msa1089250:CDS 45.0%
! GTTCATGGATTGTATGAGGG+TGG + chr7_3:2599942-2599961 Msa1089250:CDS 45.0%
CTTGAGGAACTGTTCACCAT+CGG - chr7_3:2600036-2600055 None:intergenic 45.0%
!! CTTTAGGTGGTGGATACTTG+AGG - chr7_3:2600052-2600071 None:intergenic 45.0%
! CCTTGAAGTACTTTAGGTGG+TGG - chr7_3:2600062-2600081 None:intergenic 45.0%
! CCACCACCTAAAGTACTTCA+AGG + chr7_3:2600059-2600078 Msa1089250:CDS 45.0%
GAACAGTAAGTAGGTCTGCA+TGG + chr7_3:2600200-2600219 Msa1089250:intron 45.0%
!! TGACTATCTAGCTTGCTTCG+CGG - chr7_3:2600449-2600468 None:intergenic 45.0%
GTCACTGCTCAAGAAAAGGA+TGG - chr7_3:2600759-2600778 None:intergenic 45.0%
AAACTCAACTCTATGGCCAG+TGG - chr7_3:2600794-2600813 None:intergenic 45.0%
GTGTGGCAAACTCAACTCTA+TGG - chr7_3:2600801-2600820 None:intergenic 45.0%
!! GCTGACAAGTTGATGATAGC+AGG - chr7_3:2600933-2600952 None:intergenic 45.0%
TTAACACCACATGGGGAAGA+TGG - chr7_3:2601468-2601487 None:intergenic 45.0%
CACAAGCTTAACACCACATG+GGG - chr7_3:2601475-2601494 None:intergenic 45.0%
CCACAAGCTTAACACCACAT+GGG - chr7_3:2601476-2601495 None:intergenic 45.0%
ACCACAAGCTTAACACCACA+TGG - chr7_3:2601477-2601496 None:intergenic 45.0%
! TGGTGTTAAGCTTGTGGTAG+AGG + chr7_3:2601479-2601498 Msa1089250:CDS 45.0%
! TATGGGCTGCCATAAAGACA+TGG + chr7_3:2601532-2601551 Msa1089250:CDS 45.0%
! ATGGGCTGCCATAAAGACAT+GGG + chr7_3:2601533-2601552 Msa1089250:CDS 45.0%
GTCTTGGACCCATGTCTTTA+TGG - chr7_3:2601544-2601563 None:intergenic 45.0%
ATTCTGAACTCCAAGCTTGG+TGG + chr7_3:2601607-2601626 Msa1089250:CDS 45.0%
CAAGTTCTTTCCACCAAGCT+TGG - chr7_3:2601620-2601639 None:intergenic 45.0%
! GAACTTGTAGAGGTTGGTCA+TGG + chr7_3:2601633-2601652 Msa1089250:CDS 45.0%
ATAAGAAAAACGAGCCGTGG+TGG + chr7_3:2601658-2601677 Msa1089250:CDS 45.0%
TCTTCACGAGCTTGCATCTT+AGG - chr7_3:2601684-2601703 None:intergenic 45.0%
AGGAGATTCATGCCAGAGAA+AGG + chr7_3:2601816-2601835 Msa1089250:CDS 45.0%
GGAGATTCATGCCAGAGAAA+GGG + chr7_3:2601817-2601836 Msa1089250:CDS 45.0%
TATTCAGCTGACCCTTTCTC+TGG - chr7_3:2601831-2601850 None:intergenic 45.0%
GCTTCTGATGAAGTGTACCT+TGG + chr7_3:2601954-2601973 Msa1089250:CDS 45.0%
TTGGATTGTCTCTCTCTCCA+AGG - chr7_3:2601974-2601993 None:intergenic 45.0%
GAGAGAGAGACAATCCAAAC+TGG + chr7_3:2601976-2601995 Msa1089250:CDS 45.0%
CTTCATCCTTCTAGTGAGGA+AGG + chr7_3:2602137-2602156 Msa1089250:CDS 45.0%
GTAAGTCCTTCCTCACTAGA+AGG - chr7_3:2602146-2602165 None:intergenic 45.0%
!!! AAAGATTTTATTTATTTTTT+CGG - chr7_3:2598016-2598035 None:intergenic 5.0%
!!! TACATTTAATAATTTTTATT+TGG + chr7_3:2598894-2598913 Msa1089250:intron 5.0%
!! GGGTGACGGGGATATTGAAT+AGG + chr7_3:2596602-2596621 Msa1089250:CDS 50.0%
! ATGGTGGGGAGGCAAATGAA+GGG - chr7_3:2597973-2597992 None:intergenic 50.0%
! AATGGTGGGGAGGCAAATGA+AGG - chr7_3:2597974-2597993 None:intergenic 50.0%
GCTTGGAAAGGCTACCTTTC+TGG + chr7_3:2598948-2598967 Msa1089250:CDS 50.0%
GGAAAGGCTACCTTTCTGGA+AGG + chr7_3:2598952-2598971 Msa1089250:CDS 50.0%
!! TGCTCCCAATGTTGGTAACG+AGG - chr7_3:2598986-2599005 None:intergenic 50.0%
TCGTTACCAACATTGGGAGC+AGG + chr7_3:2598985-2599004 Msa1089250:CDS 50.0%
GATTGTCCTGCTCCCAATGT+TGG - chr7_3:2598994-2599013 None:intergenic 50.0%
GCGGTCAAGTTTGTGGTGTT+TGG - chr7_3:2599181-2599200 None:intergenic 50.0%
TCATACACCTGTGTGACACC+TGG - chr7_3:2599244-2599263 None:intergenic 50.0%
AATGGAGCCGGTGTTTCACT+AGG - chr7_3:2599401-2599420 None:intergenic 50.0%
GAACAGGAGAACGCAAAGAG+TGG + chr7_3:2599465-2599484 Msa1089250:CDS 50.0%
GAGAACGCAAAGAGTGGGAA+AGG + chr7_3:2599471-2599490 Msa1089250:CDS 50.0%
ATGCTCGTCCTGTTCTTGGA+GGG + chr7_3:2599549-2599568 Msa1089250:CDS 50.0%
TCATCAGACCCTCCAAGAAC+AGG - chr7_3:2599560-2599579 None:intergenic 50.0%
GGATTTGGGCGACTTCATGA+AGG + chr7_3:2600393-2600412 Msa1089250:intron 50.0%
!! TATCTAGCTTGCTTCGCGGA+GGG - chr7_3:2600445-2600464 None:intergenic 50.0%
AGAAGGGCTCACAGTAGAAG+AGG + chr7_3:2600523-2600542 Msa1089250:CDS 50.0%
CGAGTAGCATAAGCCTTCGT+TGG - chr7_3:2600734-2600753 None:intergenic 50.0%
TTGAGTTTGCCACACCCTGA+CGG + chr7_3:2600806-2600825 Msa1089250:CDS 50.0%
CACCATGTTCATCTCCGTCA+GGG - chr7_3:2600823-2600842 None:intergenic 50.0%
GTTTATCAACCCGCGCTAGA+AGG + chr7_3:2600854-2600873 Msa1089250:CDS 50.0%
ACTGTCAACACCTTCTAGCG+CGG - chr7_3:2600867-2600886 None:intergenic 50.0%
TTCTCTTGCTCGACAATCCC+TGG + chr7_3:2601159-2601178 Msa1089250:CDS 50.0%
GATACCTCCATCGTTGACCA+GGG - chr7_3:2601179-2601198 None:intergenic 50.0%
TGATACCTCCATCGTTGACC+AGG - chr7_3:2601180-2601199 None:intergenic 50.0%
! CCCATGTGGTGTTAAGCTTG+TGG + chr7_3:2601473-2601492 Msa1089250:CDS 50.0%
GCGATAAGAAAAACGAGCCG+TGG + chr7_3:2601655-2601674 Msa1089250:CDS 50.0%
GAGAAGCTAAGACACCGTCT+TGG + chr7_3:2602089-2602108 Msa1089250:CDS 50.0%
CATGCTCGTCCTGTTCTTGG+AGG + chr7_3:2599548-2599567 Msa1089250:CDS 55.0%
GTTCTCCCCCTACGAGGATA+AGG - chr7_3:2599587-2599606 None:intergenic 55.0%
TATCCTCGTAGGGGGAGAAC+TGG + chr7_3:2599587-2599606 Msa1089250:CDS 55.0%
!! CTATCTAGCTTGCTTCGCGG+AGG - chr7_3:2600446-2600465 None:intergenic 55.0%
TGTTCATCTCCGTCAGGGTG+TGG - chr7_3:2600818-2600837 None:intergenic 55.0%
CACCCTGACGGAGATGAACA+TGG + chr7_3:2600818-2600837 Msa1089250:CDS 55.0%
GCACCATGTTCATCTCCGTC+AGG - chr7_3:2600824-2600843 None:intergenic 55.0%
CTGTCAACACCTTCTAGCGC+GGG - chr7_3:2600866-2600885 None:intergenic 55.0%
CGACAATCCCTGGTCAACGA+TGG + chr7_3:2601169-2601188 Msa1089250:CDS 55.0%
CAATCCCTGGTCAACGATGG+AGG + chr7_3:2601172-2601191 Msa1089250:CDS 55.0%
TCAGCAGGCAATGCTTGACC+TGG - chr7_3:2601274-2601293 None:intergenic 55.0%
GAGGATCCATCTTCCCCATG+TGG + chr7_3:2601459-2601478 Msa1089250:CDS 55.0%
GCTTGCATCTTAGGCCACCA+CGG - chr7_3:2601675-2601694 None:intergenic 55.0%
GCTAAGACACCGTCTTGGAC+CGG + chr7_3:2602094-2602113 Msa1089250:CDS 55.0%
GCATCTGAACCGGTCCAAGA+CGG - chr7_3:2602106-2602125 None:intergenic 55.0%
CTGCCAGTTCTCCCCCTACG+AGG - chr7_3:2599593-2599612 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 2596592 2602199 2596592 ID=Msa1089250;Name=Msa1089250
chr7_3 mRNA 2596592 2602199 2596592 ID=Msa1089250-mRNA-1;Parent=Msa1089250;Name=Msa1089250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|9|0|861
chr7_3 exon 2596592 2596808 2596592 ID=Msa1089250-mRNA-1:exon:1101;Parent=Msa1089250-mRNA-1
chr7_3 exon 2598932 2599218 2598932 ID=Msa1089250-mRNA-1:exon:1102;Parent=Msa1089250-mRNA-1
chr7_3 exon 2599389 2599629 2599389 ID=Msa1089250-mRNA-1:exon:1103;Parent=Msa1089250-mRNA-1
chr7_3 exon 2599757 2600080 2599757 ID=Msa1089250-mRNA-1:exon:1104;Parent=Msa1089250-mRNA-1
chr7_3 exon 2600206 2600291 2600206 ID=Msa1089250-mRNA-1:exon:1105;Parent=Msa1089250-mRNA-1
chr7_3 exon 2600437 2600544 2600437 ID=Msa1089250-mRNA-1:exon:1106;Parent=Msa1089250-mRNA-1
chr7_3 exon 2600653 2600957 2600653 ID=Msa1089250-mRNA-1:exon:1107;Parent=Msa1089250-mRNA-1
chr7_3 exon 2601042 2601305 2601042 ID=Msa1089250-mRNA-1:exon:1108;Parent=Msa1089250-mRNA-1
chr7_3 exon 2601446 2602199 2601446 ID=Msa1089250-mRNA-1:exon:1109;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2596592 2596808 2596592 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2598932 2599218 2598932 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2599389 2599629 2599389 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2599757 2600080 2599757 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2600206 2600291 2600206 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2600437 2600544 2600437 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2600653 2600957 2600653 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2601042 2601305 2601042 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
chr7_3 CDS 2601446 2602199 2601446 ID=Msa1089250-mRNA-1:cds;Parent=Msa1089250-mRNA-1
Gene Sequence

>Msa1089250

ATGTTTTCAGGGGTGACGGGGATATTGAATAGGGGTCATAAGATAAAAGGAACGGTGGTGTTGATGAGAAAGAACGTTTTGGATATAAATAGTTTAACCAGTGTTGGTGGAGTTATTGGTCAAGGTTTCGACATTCTTGGTTCAACACTTGATAATCTTACTGCTTTCTTAGGCCGTTCTGTTTCTCTTCAGTTGATTAGTGCAACTAAACCTGATGCAAATGGAAAAGGGAAGCTTGGAAAGGCTACCTTTCTGGAAGGTATAATTACCTCGTTACCAACATTGGGAGCAGGACAATCTGCATTCAAAATTCATTTTGAATGGGATGATGACATGGGAATTCCTGGAGCATTTTACATCAAGAACTTTATGCAAACTGAGTTTTTCCTTGTGAGTTTGACTCTTGAAGACATTCCAAATCATGGAAGCATCTACTTTGTATGCAACTCCTGGATTTATAATGCCAAACACCACAAACTTGACCGCATTTTCTTTGCCAACAAGGCATATCTTCCTAGTGAAACACCGGCTCCATTAGTCCATTACAGAGAAGAAGAATTGGATAATTTAAGAGGAGATGGAACAGGAGAACGCAAAGAGTGGGAAAGGATCTATGATTATGATGTCTACAATGATTTAGGAAATCCGGAGAAAGGTGAAAATCATGCTCGTCCTGTTCTTGGAGGGTCTGATGAATATCCTTATCCTCGTAGGGGGAGAACTGGCAGAAAGCCAAATAGGAAAGATCCTAAAAGTGAGAGTAGGAGTGATTTTGTGTATCTTCCAAGAGATGAAGCTTTTGGTCACTTGAAGTCATCAGATTTTCTTACTTATGGACTGAAAGCAGTATCTCAAAATGTGGTCCCAGCATTAGAGTCTGTAATCTTTGATTTAAATTTCACACCAAATGAGTTTGATAGCTTTGATGAAGTTCATGGATTGTATGAGGGTGGAATTAAGCTGCCAACAGATGTACTTAGCAAGATAAGTCCATTACCTGTGCTCAAAGAAATCTTTCGAACCGATGGTGAACAGTTCCTCAAGTATCCACCACCTAAAGTACTTCAAGTAAGTAGGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTTGCTGGAGTAAATCCAAATGTGATCTGCTGTCTTCAGGAGTTCCCTCCGCGAAGCAAGCTAGATAGTCAAGTCTATGGTGATCACACTAGTAAAATAACCAAAGAACACCTAGAACCTAATTTAGAAGGGCTCACAGTAGAAGAGGCAATTCAAAACAAGAAATTGTTCCTGCTAGATCATCATGACTCAATAATGCCATATTTAAGGCGAATAAACTCGACTCCAACGAAGGCTTATGCTACTCGAACCATCCTTTTCTTGAGCAGTGACAAAACTTTGAAGCCACTGGCCATAGAGTTGAGTTTGCCACACCCTGACGGAGATGAACATGGTGCTGTTAGTCATGTTTATCAACCCGCGCTAGAAGGTGTTGACAGTACTATCTGGTTACTGGCTAAGGCTTATGTAGTTGTGAATGATTCCTGCTATCATCAACTTGTCAGCCATTGGTTAAATACTCATGCAGTTGTTGAACCATTTGTCATAGCAACTAACAGACATCTGAGTTATCTTCACCCCATTTATAAACTTTTGTATCCTCACTATCGTGATACAATGAATATAAATTCTCTTGCTCGACAATCCCTGGTCAACGATGGAGGTATCATCGAAAAAACATTTTTGTGGGGAAGATATTCCATGGAAATGTCTTCTAAAGTTTACAAGAATTGGACTTTGCCAGGTCAAGCATTGCCTGCTGATCTTATAAAAAGAGGAATGGCAATTGAGGATCCATCTTCCCCATGTGGTGTTAAGCTTGTGGTAGAGGATTACCCTTATGCTCATGATGGATTAGATATATGGGCTGCCATAAAGACATGGGTCCAAGACTATGTCTCCTTGTACTACACCACAGATGACATACTTAGACAAGATTCTGAACTCCAAGCTTGGTGGAAAGAACTTGTAGAGGTTGGTCATGGCGATAAGAAAAACGAGCCGTGGTGGCCTAAGATGCAAGCTCGTGAAGAGCTAGTCGAAGTTTGCACTACTGTCATATGGATTGCTTCAGCTCTTCATGCAGCTGTTAATTTTGGACAGTATTCCTATGGTGGTTTAATATTAAACCGTCCAACTCTTAGTAGGAGATTCATGCCAGAGAAAGGGTCAGCTGAATACAACGAGCTAGTCAAAAGTCCACAAAAGGCATACTTGAAGACAATTACACCAAAATTTCAGACACTTATCGACCTTTCCGTTATAGAGATATTATCAAGGCATGCTTCTGATGAAGTGTACCTTGGAGAGAGAGACAATCCAAACTGGACATCAGATACAAGGGCATTAGAGGCCTTTAAGAAGTTTGGAAATAAGTTAGCAGAAATTGAGAAGAATCTTGCTCAGAGAAACAATGATGAGAAGCTAAGACACCGTCTTGGACCGGTTCAGATGCCTTATACTTTGCTTCATCCTTCTAGTGAGGAAGGACTTACTTTTAGAGGAATTCCTAATAGTATCTCTATCTGA
Protein sequence

>Msa1089250

MFSGVTGILNRGHKIKGTVVLMRKNVLDINSLTSVGGVIGQGFDILGSTLDNLTAFLGRSVSLQLISATKPDANGKGKLGKATFLEGIITSLPTLGAGQSAFKIHFEWDDDMGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIYFVCNSWIYNAKHHKLDRIFFANKAYLPSETPAPLVHYREEELDNLRGDGTGERKEWERIYDYDVYNDLGNPEKGENHARPVLGGSDEYPYPRRGRTGRKPNRKDPKSESRSDFVYLPRDEAFGHLKSSDFLTYGLKAVSQNVVPALESVIFDLNFTPNEFDSFDEVHGLYEGGIKLPTDVLSKISPLPVLKEIFRTDGEQFLKYPPPKVLQVSRSAWMTDEEFAREMLAGVNPNVICCLQEFPPRSKLDSQVYGDHTSKITKEHLEPNLEGLTVEEAIQNKKLFLLDHHDSIMPYLRRINSTPTKAYATRTILFLSSDKTLKPLAIELSLPHPDGDEHGAVSHVYQPALEGVDSTIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSYLHPIYKLLYPHYRDTMNINSLARQSLVNDGGIIEKTFLWGRYSMEMSSKVYKNWTLPGQALPADLIKRGMAIEDPSSPCGVKLVVEDYPYAHDGLDIWAAIKTWVQDYVSLYYTTDDILRQDSELQAWWKELVEVGHGDKKNEPWWPKMQAREELVEVCTTVIWIASALHAAVNFGQYSYGGLILNRPTLSRRFMPEKGSAEYNELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKKFGNKLAEIEKNLAQRNNDEKLRHRLGPVQMPYTLLHPSSEEGLTFRGIPNSISI*