Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224080 | XP_003597559.1 | 99.187 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224080 | sp|P09918|LOX3_PEA | 92.334 | 861 | 66 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224080 | G7IS30 | 99.187 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1770 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009530 | Msa0224080 | 0.824742 | 6.843275e-54 | -8.615850e-47 |
| Msa0024500 | Msa0224080 | 0.816006 | 6.907033e-52 | -8.615850e-47 |
| Msa0072390 | Msa0224080 | 0.804705 | 1.900415e-49 | -8.615850e-47 |
| Msa0163960 | Msa0224080 | 0.820980 | 5.147647e-53 | -8.615850e-47 |
| Msa0194750 | Msa0224080 | 0.800355 | 1.498460e-48 | -8.615850e-47 |
| Msa0208040 | Msa0224080 | 0.805107 | 1.566206e-49 | -8.615850e-47 |
| Msa0208710 | Msa0224080 | 0.820483 | 6.699114e-53 | -8.615850e-47 |
| Msa0209370 | Msa0224080 | 0.818912 | 1.530391e-52 | -8.615850e-47 |
| Msa0224080 | Msa0225070 | 0.825224 | 5.267275e-54 | -8.615850e-47 |
| Msa0224080 | Msa0367590 | 0.800661 | 1.298021e-48 | -8.615850e-47 |
| Msa0224080 | Msa0427260 | 0.803544 | 3.313363e-49 | -8.615850e-47 |
| Msa0224080 | Msa0456450 | 0.802364 | 5.810841e-49 | -8.615850e-47 |
| Msa0224080 | Msa0457070 | 0.804325 | 2.280784e-49 | -8.615850e-47 |
| Msa0224080 | Msa0538050 | 0.801645 | 8.164406e-49 | -8.615850e-47 |
| Msa0224080 | Msa0561420 | 0.803558 | 3.292563e-49 | -8.615850e-47 |
| Msa0224080 | Msa0568300 | 0.800188 | 1.620174e-48 | -8.615850e-47 |
| Msa0224080 | Msa0615430 | 0.805509 | 1.289854e-49 | -8.615850e-47 |
| Msa0224080 | Msa0625900 | 0.802334 | 5.893019e-49 | -8.615850e-47 |
| Msa0224080 | Msa0632040 | 0.809797 | 1.584263e-50 | -8.615850e-47 |
| Msa0224080 | Msa0654880 | 0.804215 | 2.404217e-49 | -8.615850e-47 |
| Msa0224080 | Msa0691740 | 0.808261 | 3.378469e-50 | -8.615850e-47 |
| Msa0224080 | Msa0698480 | 0.808617 | 2.836577e-50 | -8.615850e-47 |
| Msa0224080 | Msa0698650 | 0.804606 | 1.992611e-49 | -8.615850e-47 |
| Msa0224080 | Msa0755500 | 0.824507 | 7.774576e-54 | -8.615850e-47 |
| Msa0224080 | Msa0827320 | 0.953601 | 1.914833e-111 | -8.615850e-47 |
| Msa0224080 | Msa0834830 | 0.832517 | 9.036273e-56 | -8.615850e-47 |
| Msa0224080 | Msa0861400 | 0.804944 | 1.693533e-49 | -8.615850e-47 |
| Msa0224080 | Msa0876270 | 0.810911 | 9.106379e-51 | -8.615850e-47 |
| Msa0224080 | Msa0917630 | 0.808287 | 3.335940e-50 | -8.615850e-47 |
| Msa0224080 | Msa0967900 | 0.826104 | 3.258267e-54 | -8.615850e-47 |
| Msa0224080 | Msa0975440 | 0.800193 | 1.616814e-48 | -8.615850e-47 |
| Msa0224080 | Msa0998660 | 0.800354 | 1.499350e-48 | -8.615850e-47 |
| Msa0224080 | Msa1089250 | 0.951815 | 9.183427e-110 | -8.615850e-47 |
| Msa0224080 | Msa1191960 | 0.803769 | 2.975766e-49 | -8.615850e-47 |
| Msa0224080 | Msa1228600 | 0.806610 | 7.568120e-50 | -8.615850e-47 |
| Msa0224080 | Msa1320550 | 0.822612 | 2.158150e-53 | -8.615850e-47 |
| Msa0224080 | Msa1327690 | 0.818145 | 2.283698e-52 | -8.615850e-47 |
| Msa0224080 | Msa1342360 | 0.802428 | 5.635452e-49 | -8.615850e-47 |
| Msa0224080 | Msa1346340 | 0.812554 | 3.999315e-51 | -8.615850e-47 |
| Msa0224080 | Msa1350580 | 0.803042 | 4.211078e-49 | -8.615850e-47 |
| Msa0224080 | Msa1364140 | 0.928175 | 4.181905e-92 | -8.615850e-47 |
| Msa0224080 | Msa1369220 | 0.808808 | 2.581839e-50 | -8.615850e-47 |
| Msa0224080 | Msa1456620 | 0.820960 | 5.203425e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224080 | MtrunA17_Chr2g0329911 | 99.187 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1770 |
| Msa0224080 | MtrunA17_Chr2g0329901 | 75.173 | 866 | 207 | 3 | 1 | 861 | 1 | 863 | 0.0 | 1369 |
| Msa0224080 | MtrunA17_Chr8g0342881 | 75.501 | 849 | 206 | 2 | 14 | 861 | 9 | 856 | 0.0 | 1353 |
| Msa0224080 | MtrunA17_Chr8g0343021 | 71.065 | 864 | 239 | 3 | 7 | 861 | 3 | 864 | 0.0 | 1284 |
| Msa0224080 | MtrunA17_Chr8g0342951 | 71.346 | 869 | 240 | 3 | 1 | 861 | 1 | 868 | 0.0 | 1283 |
| Msa0224080 | MtrunA17_Chr8g0343031 | 71.445 | 865 | 235 | 5 | 7 | 861 | 3 | 865 | 0.0 | 1276 |
| Msa0224080 | MtrunA17_Chr8g0344211 | 69.965 | 869 | 252 | 3 | 1 | 861 | 1 | 868 | 0.0 | 1274 |
| Msa0224080 | MtrunA17_Chr5g0406871 | 70.473 | 867 | 242 | 5 | 7 | 861 | 3 | 867 | 0.0 | 1269 |
| Msa0224080 | MtrunA17_Chr8g0342971 | 70.149 | 871 | 249 | 6 | 1 | 861 | 1 | 870 | 0.0 | 1269 |
| Msa0224080 | MtrunA17_Chr8g0343011 | 70.034 | 871 | 245 | 3 | 1 | 861 | 1 | 865 | 0.0 | 1266 |
| Msa0224080 | MtrunA17_Chr8g0342891 | 69.222 | 861 | 258 | 4 | 6 | 861 | 3 | 861 | 0.0 | 1257 |
| Msa0224080 | MtrunA17_Chr8g0342921 | 67.995 | 878 | 255 | 6 | 1 | 861 | 1 | 869 | 0.0 | 1234 |
| Msa0224080 | MtrunA17_Chr3g0120071 | 65.349 | 860 | 287 | 6 | 8 | 861 | 4 | 858 | 0.0 | 1171 |
| Msa0224080 | MtrunA17_Chr8g0342931 | 71.238 | 751 | 214 | 2 | 112 | 861 | 1 | 750 | 0.0 | 1122 |
| Msa0224080 | MtrunA17_Chr1g0191921 | 62.457 | 871 | 300 | 8 | 1 | 861 | 5 | 858 | 0.0 | 1117 |
| Msa0224080 | MtrunA17_Chr8g0342901 | 63.152 | 863 | 268 | 9 | 9 | 861 | 6 | 828 | 0.0 | 1107 |
| Msa0224080 | MtrunA17_Chr7g0272791 | 59.456 | 883 | 320 | 11 | 1 | 861 | 1 | 867 | 0.0 | 1065 |
| Msa0224080 | MtrunA17_Chr1g0205611 | 56.552 | 870 | 345 | 10 | 9 | 861 | 3 | 856 | 0.0 | 1012 |
| Msa0224080 | MtrunA17_Chr8g0343001 | 58.178 | 856 | 303 | 8 | 9 | 861 | 4 | 807 | 0.0 | 998 |
| Msa0224080 | MtrunA17_Chr8g0342991 | 57.643 | 857 | 306 | 10 | 9 | 861 | 4 | 807 | 0.0 | 989 |
| Msa0224080 | MtrunA17_Chr8g0342981 | 58.293 | 820 | 295 | 11 | 58 | 861 | 35 | 823 | 0.0 | 942 |
| Msa0224080 | MtrunA17_Chr8g0344201 | 46.036 | 845 | 434 | 14 | 29 | 860 | 91 | 926 | 0.0 | 736 |
| Msa0224080 | MtrunA17_Chr8g0377101 | 44.811 | 819 | 427 | 14 | 57 | 861 | 109 | 916 | 0.0 | 690 |
| Msa0224080 | MtrunA17_Chr3g0118651 | 42.361 | 864 | 451 | 15 | 11 | 861 | 74 | 903 | 0.0 | 681 |
| Msa0224080 | MtrunA17_Chr3g0118641 | 41.744 | 860 | 466 | 15 | 19 | 861 | 61 | 902 | 0.0 | 667 |
| Msa0224080 | MtrunA17_Chr8g0338451 | 42.561 | 820 | 430 | 15 | 50 | 844 | 47 | 850 | 0.0 | 656 |
| Msa0224080 | MtrunA17_Chr4g0047281 | 41.383 | 824 | 436 | 14 | 53 | 860 | 102 | 894 | 0.0 | 627 |
| Msa0224080 | MtrunA17_Chr4g0033171 | 45.698 | 709 | 371 | 9 | 161 | 861 | 23 | 725 | 0.0 | 625 |
| Msa0224080 | MtrunA17_Chr3g0118621 | 43.693 | 769 | 411 | 11 | 106 | 861 | 106 | 865 | 0.0 | 615 |
| Msa0224080 | MtrunA17_Chr8g0344241 | 70.886 | 395 | 114 | 1 | 468 | 861 | 67 | 461 | 0.0 | 585 |
| Msa0224080 | MtrunA17_Chr8g0344241 | 50.685 | 73 | 29 | 2 | 287 | 359 | 9 | 74 | 2.76e-12 | 70.1 |
| Msa0224080 | MtrunA17_Chr6g0471951 | 40.426 | 517 | 261 | 7 | 316 | 827 | 11 | 485 | 4.61e-132 | 404 |
| Msa0224080 | MtrunA17_Chr7g0218231 | 59.829 | 117 | 46 | 1 | 516 | 631 | 16 | 132 | 3.25e-41 | 147 |
| Msa0224080 | MtrunA17_Chr6g0468081 | 53.933 | 89 | 40 | 1 | 544 | 631 | 1 | 89 | 2.28e-25 | 100 |
| Msa0224080 | MtrunA17_Chr3g0137991 | 48.413 | 126 | 46 | 3 | 738 | 861 | 1 | 109 | 3.52e-25 | 100 |
| Msa0224080 | MtrunA17_Chr2g0277191 | 58.333 | 60 | 24 | 1 | 735 | 794 | 58 | 116 | 1.44e-17 | 79.7 |
| Msa0224080 | MtrunA17_Chr7g0272781 | 54.839 | 62 | 28 | 0 | 754 | 815 | 8 | 69 | 2.75e-17 | 77.8 |
| Msa0224080 | MtrunA17_Chr4g0047271 | 42.857 | 91 | 51 | 1 | 771 | 860 | 1 | 91 | 7.40e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224080 | AT1G55020.1 | 60.182 | 879 | 312 | 10 | 1 | 861 | 1 | 859 | 0.0 | 1079 |
| Msa0224080 | AT3G22400.1 | 57.077 | 869 | 336 | 10 | 14 | 861 | 34 | 886 | 0.0 | 1019 |
| Msa0224080 | AT1G72520.1 | 45.255 | 822 | 431 | 11 | 50 | 861 | 114 | 926 | 0.0 | 721 |
| Msa0224080 | AT1G17420.1 | 44.289 | 858 | 445 | 13 | 14 | 861 | 85 | 919 | 0.0 | 712 |
| Msa0224080 | AT3G45140.1 | 43.705 | 826 | 427 | 19 | 50 | 861 | 95 | 896 | 0.0 | 662 |
| Msa0224080 | AT1G67560.1 | 44.161 | 822 | 427 | 14 | 57 | 861 | 111 | 917 | 0.0 | 658 |
| Msa0224080 | AT3G45140.2 | 45.229 | 765 | 393 | 15 | 110 | 861 | 3 | 754 | 0.0 | 650 |
Find 198 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTTCCAAACTTCTTAA+AGG | 0.131647 | 2_1:+73797507 | None:intergenic |
| CTTCATGCAGCTGTTAATTT+TGG | 0.135058 | 2_1:-73797784 | Msa0224080:CDS |
| GCTTGGAAAGGCTACCTTTC+TGG | 0.147026 | 2_1:-73800586 | Msa0224080:CDS |
| GTCTTGGACCCATGTCTTTA+TGG | 0.177320 | 2_1:+73797990 | None:intergenic |
| GAAGTTTAACCTTTCCTATT+TGG | 0.185897 | 2_1:+73799915 | None:intergenic |
| TATGATGTCTACAATGATTT+AGG | 0.198014 | 2_1:-73800029 | Msa0224080:CDS |
| ACTCAATAATGCCATATTTA+AGG | 0.200843 | 2_1:-73798838 | Msa0224080:CDS |
| AGGATACAAAAGTTTATAAA+TGG | 0.201433 | 2_1:+73798421 | None:intergenic |
| TCGATAAGTGTCTGAAATTT+TGG | 0.216610 | 2_1:+73797631 | None:intergenic |
| CTCATGATGGATTAGATATA+TGG | 0.224741 | 2_1:-73798017 | Msa0224080:CDS |
| CTTCTAAAGTTTACAAGAAT+TGG | 0.234179 | 2_1:-73798289 | Msa0224080:CDS |
| TCTTCACGAGCTTGCATCTT+AGG | 0.236547 | 2_1:+73797850 | None:intergenic |
| GATAATCTTACTGCTTTCTT+AGG | 0.245074 | 2_1:-73802801 | Msa0224080:CDS |
| GAAATACCTTGAAGTACTTT+AGG | 0.278008 | 2_1:+73799467 | None:intergenic |
| ACCAGTGTTGGCGGAGTTAT+TGG | 0.281947 | 2_1:-73802855 | Msa0224080:CDS |
| TTAGAGGCCTTTAAGAAGTT+TGG | 0.281957 | 2_1:-73797514 | Msa0224080:CDS |
| ACTGTGAGCCCTTCTAAATT+AGG | 0.288323 | 2_1:+73799016 | None:intergenic |
| GAGTTTATTCGCCTTAAATA+TGG | 0.300979 | 2_1:+73798827 | None:intergenic |
| TGACAGTACTATTTGGTTAC+TGG | 0.304403 | 2_1:-73798651 | Msa0224080:CDS |
| TCTTCTCTGTAATGGACTAA+TGG | 0.308219 | 2_1:+73800116 | None:intergenic |
| CTTCCAAGAGATGAAGCTTT+TGG | 0.309488 | 2_1:-73799740 | Msa0224080:CDS |
| AATAGGGGTCATAAGATAAA+AGG | 0.310068 | 2_1:-73802924 | Msa0224080:CDS |
| AAGTAGATGCTTCCATGATT+TGG | 0.311647 | 2_1:+73800405 | None:intergenic |
| ATTAGGTTCTAGGTGTTCTT+TGG | 0.320520 | 2_1:+73799033 | None:intergenic |
| GCCCTTCTAAATTAGGTTCT+AGG | 0.324988 | 2_1:+73799023 | None:intergenic |
| CCAATTCTTCTTCTCTGTAA+TGG | 0.332097 | 2_1:+73800108 | None:intergenic |
| CTTCAGATAGAGATACTATT+AGG | 0.343809 | 2_1:+73797352 | None:intergenic |
| GATAGCTTTGATGAAGTTCA+TGG | 0.345965 | 2_1:-73799605 | Msa0224080:CDS |
| CACCTAGAACCTAATTTAGA+AGG | 0.346924 | 2_1:-73799025 | Msa0224080:CDS |
| GAAGGATGAAGCAAAGTATA+AGG | 0.351751 | 2_1:+73797406 | None:intergenic |
| TGCCTGCTGATCTTATAAAA+AGG | 0.357335 | 2_1:-73798247 | Msa0224080:intron |
| GGTCAAGGTTTCGACATTCT+TGG | 0.358750 | 2_1:-73802834 | Msa0224080:CDS |
| AATCATGCTCGTCCTGTTCT+TGG | 0.365294 | 2_1:-73799987 | Msa0224080:CDS |
| ATCAGATACAAGGGCATTAG+AGG | 0.370748 | 2_1:-73797530 | Msa0224080:CDS |
| TATTCAGCTGACCCTTTCTC+TGG | 0.371851 | 2_1:+73797703 | None:intergenic |
| CTTGTATCTGATGTCCAGTT+TGG | 0.373343 | 2_1:+73797541 | None:intergenic |
| TGAAGACAGCAGATCACATT+TGG | 0.374523 | 2_1:+73799263 | None:intergenic |
| GAAGAATTGGATAATTTAAG+AGG | 0.378647 | 2_1:-73800095 | Msa0224080:CDS |
| TGACCAAAAGCTTCATCTCT+TGG | 0.391538 | 2_1:+73799737 | None:intergenic |
| GCGGTCAAGTTTGTGGTGTT+TGG | 0.393878 | 2_1:+73800356 | None:intergenic |
| GAACTGGCAGAAAGCCAAAT+AGG | 0.394315 | 2_1:-73799929 | Msa0224080:CDS |
| GTTGATGAGAAAGAACGTTT+TGG | 0.396705 | 2_1:-73802892 | Msa0224080:CDS |
| GGATACAAAAGTTTATAAAT+GGG | 0.397641 | 2_1:+73798422 | None:intergenic |
| AAGGTGTTGACAGTACTATT+TGG | 0.399757 | 2_1:-73798658 | Msa0224080:CDS |
| TCAAAGCTATCAAACTCATT+TGG | 0.400263 | 2_1:+73799617 | None:intergenic |
| GATGATGACATGGGAATTCC+TGG | 0.404317 | 2_1:-73800495 | Msa0224080:CDS |
| CCATTACAGAGAAGAAGAAT+TGG | 0.410502 | 2_1:-73800108 | Msa0224080:CDS |
| AAGTTTGCACTACTGTCATA+TGG | 0.411943 | 2_1:-73797819 | Msa0224080:CDS |
| GTGTGGCAAACTCAACTCTA+TGG | 0.415566 | 2_1:+73798733 | None:intergenic |
| GTTTATCAACCCGCGCTAGA+AGG | 0.415970 | 2_1:-73798677 | Msa0224080:CDS |
| TCTAATCCATCATGAGCATA+AGG | 0.416079 | 2_1:+73798024 | None:intergenic |
| CAAGTTCTTTCCACCAAGCT+TGG | 0.416248 | 2_1:+73797914 | None:intergenic |
| AAATGTGATCTGCTGTCTTC+AGG | 0.419247 | 2_1:-73799261 | Msa0224080:intron |
| ATTTCTTTGAGCACAGGTAA+TGG | 0.423088 | 2_1:+73799530 | None:intergenic |
| GTAAGTCCTTCCTCACTAGA+AGG | 0.433641 | 2_1:+73797388 | None:intergenic |
| TACTATTTGGTTACTGGCTA+AGG | 0.437631 | 2_1:-73798645 | Msa0224080:CDS |
| TTTGCAAGAGAAATGCTTGC+TGG | 0.439835 | 2_1:-73799293 | Msa0224080:CDS |
| AAGCTAGATAGTCAAGTCTA+TGG | 0.439854 | 2_1:-73799076 | Msa0224080:CDS |
| CCACCACCTAAAGTACTTCA+AGG | 0.442382 | 2_1:-73799473 | Msa0224080:intron |
| TACAAGAATTGGACTTTGCC+AGG | 0.442800 | 2_1:-73798278 | Msa0224080:CDS |
| CTACAATGATTTAGGAAATC+CGG | 0.445050 | 2_1:-73800021 | Msa0224080:CDS |
| CTTGAAGACATTCCAAATCA+TGG | 0.449276 | 2_1:-73800417 | Msa0224080:CDS |
| GGGTGACGGGGATATTGAAT+AGG | 0.449380 | 2_1:-73802941 | Msa0224080:CDS |
| TAAACTGTTATTTAGAGGAA+TGG | 0.452635 | 2_1:-73798100 | Msa0224080:intron |
| GGTGACGGGGATATTGAATA+GGG | 0.454200 | 2_1:-73802940 | Msa0224080:CDS |
| AATTTAAGAGGAGATGGAAC+AGG | 0.457209 | 2_1:-73800083 | Msa0224080:CDS |
| TTGGATAATTTAAGAGGAGA+TGG | 0.457945 | 2_1:-73800089 | Msa0224080:CDS |
| ATTACCTCGTTACCAACATT+GGG | 0.468046 | 2_1:-73800555 | Msa0224080:CDS |
| CGAAAGATTTCTTTGAGCAC+AGG | 0.468335 | 2_1:+73799524 | None:intergenic |
| TTCTCTTGCTCGACAATCCC+TGG | 0.469936 | 2_1:-73798372 | Msa0224080:CDS |
| AAAGTATAAGGCATCTGAAC+CGG | 0.470881 | 2_1:+73797418 | None:intergenic |
| CATGCTCGTCCTGTTCTTGG+AGG | 0.471870 | 2_1:-73799984 | Msa0224080:CDS |
| AGGAGATTCATGCCAGAGAA+AGG | 0.472743 | 2_1:-73797715 | Msa0224080:CDS |
| GCACCATGTTCATCTCCGTC+AGG | 0.473569 | 2_1:+73798710 | None:intergenic |
| TCTACTTTGTATGCAACTCC+TGG | 0.474359 | 2_1:-73800389 | Msa0224080:CDS |
| AATTACCTCGTTACCAACAT+TGG | 0.475554 | 2_1:-73800556 | Msa0224080:CDS |
| TCATCAGACCCTCCAAGAAC+AGG | 0.477028 | 2_1:+73799975 | None:intergenic |
| GAGAGAGAGACAATCCAAAC+TGG | 0.477917 | 2_1:-73797555 | Msa0224080:CDS |
| TGGTGTTAAGCTTGTGGTAG+AGG | 0.478787 | 2_1:-73798052 | Msa0224080:CDS |
| TGATACCTCCATCGTTGACC+AGG | 0.480839 | 2_1:+73798354 | None:intergenic |
| CTGTTAGTTGCTATGACAAA+TGG | 0.485866 | 2_1:+73798464 | None:intergenic |
| CCTTGATAATATCTCTATAA+CGG | 0.488021 | 2_1:+73797603 | None:intergenic |
| TGAAGTTCATGGATTGTATG+AGG | 0.488443 | 2_1:-73799594 | Msa0224080:CDS |
| AGAAAATGCGGTCAAGTTTG+TGG | 0.492571 | 2_1:+73800349 | None:intergenic |
| CTTCATCCTTCTAGTGAGGA+AGG | 0.493335 | 2_1:-73797394 | Msa0224080:CDS |
| AAGATTACAGACTCTAATGC+TGG | 0.496355 | 2_1:+73799656 | None:intergenic |
| GCAAATGGAAAAGGGAAGCT+TGG | 0.496407 | 2_1:-73800603 | Msa0224080:CDS |
| ATTTAGAGGAATGGCAATTG+AGG | 0.498020 | 2_1:-73798091 | Msa0224080:intron |
| TAAACCGTCCAACTCTTAGT+AGG | 0.498943 | 2_1:-73797735 | Msa0224080:CDS |
| GATTACCCTTATGCTCATGA+TGG | 0.501130 | 2_1:-73798030 | Msa0224080:CDS |
| ACCAATAACTCCGCCAACAC+TGG | 0.503977 | 2_1:+73802854 | None:intergenic |
| TGAATATCCTTATCCTCGTA+GGG | 0.505776 | 2_1:-73799955 | Msa0224080:CDS |
| TTATTAATTGAACAGTAAGT+AGG | 0.507897 | 2_1:-73799340 | Msa0224080:intron |
| CGAGTAGCATAAGCCTTCGT+TGG | 0.513089 | 2_1:+73798800 | None:intergenic |
| ATAAATAGTTTAACCAGTGT+TGG | 0.514416 | 2_1:-73802867 | Msa0224080:CDS |
| CAAACTGGACATCAGATACA+AGG | 0.515129 | 2_1:-73797540 | Msa0224080:CDS |
| CCTTGAAGTACTTTAGGTGG+TGG | 0.515750 | 2_1:+73799473 | None:intergenic |
| ATCATCAACTTGTCAGCCAT+TGG | 0.519374 | 2_1:-73798595 | Msa0224080:intron |
| TGACTATCTAGCTTGCTTCG+CGG | 0.521367 | 2_1:+73799085 | None:intergenic |
| TCATGATGGATTAGATATAT+GGG | 0.524917 | 2_1:-73798016 | Msa0224080:CDS |
| GCTAGTCAAAAGTCCACAAA+AGG | 0.525330 | 2_1:-73797674 | Msa0224080:CDS |
| GTGTTTGGCATTATAAATCC+AGG | 0.526188 | 2_1:+73800371 | None:intergenic |
| GCTGACAAGTTGATGATAGC+AGG | 0.527862 | 2_1:+73798601 | None:intergenic |
| CCGTTATAGAGATATTATCA+AGG | 0.528835 | 2_1:-73797603 | Msa0224080:CDS |
| ATTCTGAACTCCAAGCTTGG+TGG | 0.533029 | 2_1:-73797924 | Msa0224080:CDS |
| GGAGATTCATGCCAGAGAAA+GGG | 0.533470 | 2_1:-73797714 | Msa0224080:CDS |
| CTAATCCATCATGAGCATAA+GGG | 0.533765 | 2_1:+73798025 | None:intergenic |
| ATGAATATCCTTATCCTCGT+AGG | 0.539701 | 2_1:-73799956 | Msa0224080:CDS |
| TGGAAAGAACTTGTAGAGGT+TGG | 0.540154 | 2_1:-73797904 | Msa0224080:CDS |
| TTGGATTGTCTCTCTCTCCA+AGG | 0.544752 | 2_1:+73797560 | None:intergenic |
| TTGAGTCATGATGATCTAGC+AGG | 0.544752 | 2_1:+73798855 | None:intergenic |
| TTCTTGATGTAAAATGCTCC+AGG | 0.545064 | 2_1:+73800477 | None:intergenic |
| TTAACACCACATGGGGAAGA+TGG | 0.545155 | 2_1:+73798066 | None:intergenic |
| GGTAATTATACCTTCCAGAA+AGG | 0.548726 | 2_1:+73800572 | None:intergenic |
| TGTTCATCTCCGTCAGGGTG+TGG | 0.548827 | 2_1:+73798716 | None:intergenic |
| AAGATTCTGAACTCCAAGCT+TGG | 0.549849 | 2_1:-73797927 | Msa0224080:CDS |
| TTTGGACAGTATTCCTATGG+TGG | 0.549856 | 2_1:-73797766 | Msa0224080:CDS |
| GTCACTGCTCAAGAAAAGGA+TGG | 0.551825 | 2_1:+73798775 | None:intergenic |
| GATTTAGGAAATCCGGAGAA+AGG | 0.552556 | 2_1:-73800014 | Msa0224080:CDS |
| GTTTAATATTAAACCACCAT+AGG | 0.555608 | 2_1:+73797753 | None:intergenic |
| TGACAAAACTTTGAAGCCAC+TGG | 0.555755 | 2_1:-73798756 | Msa0224080:CDS |
| GTTGGCGGAGTTATTGGTCA+AGG | 0.556786 | 2_1:-73802849 | Msa0224080:CDS |
| AACTTTAGAAGACATTTCCA+TGG | 0.557234 | 2_1:+73798301 | None:intergenic |
| AATAGTTTAACCAGTGTTGG+CGG | 0.559426 | 2_1:-73802864 | Msa0224080:CDS |
| CCCATGTGGTGTTAAGCTTG+TGG | 0.560091 | 2_1:-73798058 | Msa0224080:CDS |
| ACCACAAGCTTAACACCACA+TGG | 0.560657 | 2_1:+73798057 | None:intergenic |
| AATAAACTCGACTCCAACGA+AGG | 0.561264 | 2_1:-73798813 | Msa0224080:CDS |
| AAAGAAATCTTTCGAACCGA+TGG | 0.561372 | 2_1:-73799515 | Msa0224080:CDS |
| ATCTTGCTAAGTACATCTGT+TGG | 0.562012 | 2_1:+73799557 | None:intergenic |
| GTCATCTGTGGTGTAGTACA+AGG | 0.566258 | 2_1:+73797960 | None:intergenic |
| CTGTAATGGACTAATGGAGC+CGG | 0.568264 | 2_1:+73800122 | None:intergenic |
| GCTTCTGATGAAGTGTACCT+TGG | 0.568815 | 2_1:-73797577 | Msa0224080:CDS |
| AATGGAGCCGGTGTTTCACT+AGG | 0.568995 | 2_1:+73800134 | None:intergenic |
| AGAAGGGCTCACAGTAGAAG+AGG | 0.571068 | 2_1:-73799008 | Msa0224080:intron |
| TTTGTGGGGAAGATATTCCA+TGG | 0.571326 | 2_1:-73798318 | Msa0224080:CDS |
| GCTAAGACACCGTCTTGGAC+CGG | 0.576095 | 2_1:-73797437 | Msa0224080:CDS |
| GAGAAGCTAAGACACCGTCT+TGG | 0.580287 | 2_1:-73797442 | Msa0224080:CDS |
| TCGTTACCAACATTGGGAGC+AGG | 0.580669 | 2_1:-73800549 | Msa0224080:CDS |
| ATGCTCGTCCTGTTCTTGGA+GGG | 0.582766 | 2_1:-73799983 | Msa0224080:CDS |
| ACCTAGAACCTAATTTAGAA+GGG | 0.587489 | 2_1:-73799024 | Msa0224080:CDS |
| ATGAATCTCCTACTAAGAGT+TGG | 0.587805 | 2_1:+73797727 | None:intergenic |
| GAGAACGCAAAGAGTGGGAA+AGG | 0.590166 | 2_1:-73800061 | Msa0224080:CDS |
| CTTTAGGTGGTGGATACTTG+AGG | 0.590324 | 2_1:+73799483 | None:intergenic |
| ATAATATCTCTATAACGGAA+AGG | 0.590956 | 2_1:+73797608 | None:intergenic |
| CTGTCAACACCTTCTAGCGC+GGG | 0.591310 | 2_1:+73798668 | None:intergenic |
| GATTGTCCTGCTCCCAATGT+TGG | 0.594856 | 2_1:+73800543 | None:intergenic |
| TCAGCAGGCAATGCTTGACC+TGG | 0.597933 | 2_1:+73798260 | None:intergenic |
| GAACAGTAAGTAGGTCTGCA+TGG | 0.598243 | 2_1:-73799331 | Msa0224080:intron |
| CTATCTAGCTTGCTTCGCGG+AGG | 0.598943 | 2_1:+73799088 | None:intergenic |
| GAACAGGAGAACGCAAAGAG+TGG | 0.600744 | 2_1:-73800067 | Msa0224080:CDS |
| TATCTAGCTTGCTTCGCGGA+GGG | 0.601690 | 2_1:+73799089 | None:intergenic |
| CTTCAAGAGTCAAACTCACA+AGG | 0.601849 | 2_1:+73800433 | None:intergenic |
| CAGATCCTAAAAGTGAGAGT+AGG | 0.603906 | 2_1:-73799778 | Msa0224080:CDS |
| GAAGTTCATGGATTGTATGA+GGG | 0.604985 | 2_1:-73799593 | Msa0224080:CDS |
| CGACAATCCCTGGTCAACGA+TGG | 0.605478 | 2_1:-73798362 | Msa0224080:CDS |
| CTTGAGGAACTGTTCACCAT+CGG | 0.606084 | 2_1:+73799499 | None:intergenic |
| GAAAGCAGTATCTCAAAATG+TGG | 0.606848 | 2_1:-73799681 | Msa0224080:CDS |
| ATACCTTGAAGTACTTTAGG+TGG | 0.608053 | 2_1:+73799470 | None:intergenic |
| GTTCATGGATTGTATGAGGG+TGG | 0.608173 | 2_1:-73799590 | Msa0224080:CDS |
| CACCCTGACGGAGATGAACA+TGG | 0.612917 | 2_1:-73798713 | Msa0224080:CDS |
| GATACAAAAGTTTATAAATG+GGG | 0.613101 | 2_1:+73798423 | None:intergenic |
| AGATTACAGACTCTAATGCT+GGG | 0.615002 | 2_1:+73799657 | None:intergenic |
| GGCAGAAAGCCAAATAGGAA+AGG | 0.615902 | 2_1:-73799924 | Msa0224080:intron |
| TTTGCTTCATCCTTCTAGTG+AGG | 0.617630 | 2_1:-73797398 | Msa0224080:CDS |
| ATCTCCTACTAAGAGTTGGA+CGG | 0.618286 | 2_1:+73797731 | None:intergenic |
| GAACTTGTAGAGGTTGGTCA+TGG | 0.619559 | 2_1:-73797898 | Msa0224080:CDS |
| GTGACGGGGATATTGAATAG+GGG | 0.620162 | 2_1:-73802939 | Msa0224080:CDS |
| TGGAAAAGGGAAGCTTGGAA+AGG | 0.620625 | 2_1:-73800598 | Msa0224080:CDS |
| CACCATGTTCATCTCCGTCA+GGG | 0.621638 | 2_1:+73798711 | None:intergenic |
| CAATCCCTGGTCAACGATGG+AGG | 0.623263 | 2_1:-73798359 | Msa0224080:CDS |
| AGTACAAGGAGACATAGTCT+TGG | 0.623306 | 2_1:+73797974 | None:intergenic |
| AACAGGAGAACGCAAAGAGT+GGG | 0.626268 | 2_1:-73800066 | Msa0224080:CDS |
| ACTGTCAACACCTTCTAGCG+CGG | 0.626642 | 2_1:+73798667 | None:intergenic |
| ATATCTTCCTAGTGAAACAC+CGG | 0.628847 | 2_1:-73800141 | Msa0224080:CDS |
| TTGAGTTTGCCACACCCTGA+CGG | 0.630643 | 2_1:-73798725 | Msa0224080:CDS |
| TTGGTGGAAAGAACTTGTAG+AGG | 0.633539 | 2_1:-73797908 | Msa0224080:CDS |
| TATGGGCTGCCATAAAGACA+TGG | 0.637221 | 2_1:-73797999 | Msa0224080:CDS |
| CACAAGCTTAACACCACATG+GGG | 0.639779 | 2_1:+73798059 | None:intergenic |
| TGCTCCCAATGTTGGTAACG+AGG | 0.641203 | 2_1:+73800551 | None:intergenic |
| TTCATTGTATCACGATAGTG+AGG | 0.644461 | 2_1:+73798401 | None:intergenic |
| TTGTCTAAGTATGTCATCTG+TGG | 0.645976 | 2_1:+73797948 | None:intergenic |
| ATTAGTGCAACTAAACCTGA+TGG | 0.649396 | 2_1:-73802756 | Msa0224080:intron |
| GGAAAGGCTACCTTTCTGGA+AGG | 0.651708 | 2_1:-73800582 | Msa0224080:CDS |
| GATACCTCCATCGTTGACCA+GGG | 0.658313 | 2_1:+73798355 | None:intergenic |
| CCACAAGCTTAACACCACAT+GGG | 0.659696 | 2_1:+73798058 | None:intergenic |
| GGGTCATAAGATAAAAGGAA+CGG | 0.661938 | 2_1:-73802919 | Msa0224080:CDS |
| CCTTGTTGGCAAAGAAAATG+CGG | 0.665349 | 2_1:+73800337 | None:intergenic |
| AATATCCTTATCCTCGTAGG+GGG | 0.667235 | 2_1:-73799953 | Msa0224080:CDS |
| GCATCTGAACCGGTCCAAGA+CGG | 0.668784 | 2_1:+73797428 | None:intergenic |
| AAACTCAACTCTATGGCCAG+TGG | 0.669772 | 2_1:+73798740 | None:intergenic |
| ATGGGCTGCCATAAAGACAT+GGG | 0.671205 | 2_1:-73797998 | Msa0224080:CDS |
| TTTGAATGGGATGATGACAT+GGG | 0.675782 | 2_1:-73800504 | Msa0224080:CDS |
| AAACTGGACATCAGATACAA+GGG | 0.678771 | 2_1:-73797539 | Msa0224080:CDS |
| TCAACTGAAGAGAAACAGAA+CGG | 0.681236 | 2_1:+73802778 | None:intergenic |
| GAATATCCTTATCCTCGTAG+GGG | 0.688179 | 2_1:-73799954 | Msa0224080:CDS |
| GCTTGCATCTTAGGCCACCA+CGG | 0.690210 | 2_1:+73797859 | None:intergenic |
| GAGGATCCATCTTCCCCATG+TGG | 0.690379 | 2_1:-73798072 | Msa0224080:CDS |
| TCATAAGATAAAAGGAACGG+TGG | 0.723426 | 2_1:-73802916 | Msa0224080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAATTAAAAAATTGTA+TGG | - | chr2_1:73800136-73800155 | Msa0224080:CDS | 10.0% |
| !!! | AAAAAAAAAAAGTAGTTTTA+AGG | + | chr2_1:73800873-73800892 | None:intergenic | 10.0% |
| !! | TTAATTATATTATAATCGTA+TGG | - | chr2_1:73801362-73801381 | Msa0224080:intron | 10.0% |
| !! | ATAATTTACAAAGAAAAAGT+AGG | + | chr2_1:73797742-73797761 | None:intergenic | 15.0% |
| !!! | ATTTATAAACTAGTTTATAG+CGG | - | chr2_1:73798013-73798032 | Msa0224080:CDS | 15.0% |
| !!! | TTAATTTGCTATATATAGTA+AGG | - | chr2_1:73798343-73798362 | Msa0224080:CDS | 15.0% |
| !!! | TAATTTGCTATATATAGTAA+GGG | - | chr2_1:73798344-73798363 | Msa0224080:CDS | 15.0% |
| !!! | TTTTAAAATGATTTGTGTTT+GGG | + | chr2_1:73798713-73798732 | None:intergenic | 15.0% |
| !!! | ATTTTAAAATGATTTGTGTT+TGG | + | chr2_1:73798714-73798733 | None:intergenic | 15.0% |
| !!! | TATTTATTTTTTCGGTAAAA+AGG | + | chr2_1:73798772-73798791 | None:intergenic | 15.0% |
| !! | TTGTTTAAAAAACTGAAATA+CGG | - | chr2_1:73799391-73799410 | Msa0224080:intron | 15.0% |
| !!! | CAAGTGTTTTTTTTTATATT+TGG | - | chr2_1:73799577-73799596 | Msa0224080:CDS | 15.0% |
| !!! | ATTCAAAATTCATTTTGAAT+GGG | - | chr2_1:73799788-73799807 | Msa0224080:intron | 15.0% |
| !! | TACCATATCATTTATTAATT+TGG | - | chr2_1:73800434-73800453 | Msa0224080:CDS | 15.0% |
| !! | TACCAAATTAATAAATGATA+TGG | + | chr2_1:73800439-73800458 | None:intergenic | 15.0% |
| !!! | ACAATTGTATTTGATTTTAA+AGG | - | chr2_1:73801405-73801424 | Msa0224080:intron | 15.0% |
| !! | ACATTATAATTAACATAGAA+AGG | + | chr2_1:73802171-73802190 | None:intergenic | 15.0% |
| !! | ACCAGTAAACTAATTTATAA+CGG | - | chr2_1:73797973-73797992 | Msa0224080:CDS | 20.0% |
| !! | AAATACCTTCATATTTAATG+CGG | - | chr2_1:73798613-73798632 | Msa0224080:CDS | 20.0% |
| !! | TTTAACCCTTATAAGATTTA+AGG | + | chr2_1:73798639-73798658 | None:intergenic | 20.0% |
| !!! | AAAAAGGAGAAGAATTTTAA+TGG | + | chr2_1:73798756-73798775 | None:intergenic | 20.0% |
| !!! | ATATTTTAGTATACTTTGGT+GGG | + | chr2_1:73798809-73798828 | None:intergenic | 20.0% |
| !! | TTTCTCATACCATTTATTAA+GGG | + | chr2_1:73798956-73798975 | None:intergenic | 20.0% |
| !!! | CATTCAAAATTCATTTTGAA+TGG | - | chr2_1:73799787-73799806 | Msa0224080:intron | 20.0% |
| !! | TGTATATATATATACCTTGT+TGG | + | chr2_1:73799985-73800004 | None:intergenic | 20.0% |
| !! | TCATTACTAAATACTCATTT+AGG | - | chr2_1:73800056-73800075 | Msa0224080:CDS | 20.0% |
| !! | TAATTAAAAAATTGTATGGC+AGG | - | chr2_1:73800140-73800159 | Msa0224080:CDS | 20.0% |
| !!! | TCATTTATTAATTTGGTACT+TGG | - | chr2_1:73800441-73800460 | Msa0224080:CDS | 20.0% |
| !! | TTATTAATTGAACAGTAAGT+AGG | - | chr2_1:73800965-73800984 | Msa0224080:intron | 20.0% |
| !!! | ATTTACAAAACTTTTACCAA+TGG | + | chr2_1:73801729-73801748 | None:intergenic | 20.0% |
| !! | GATACAAAAGTTTATAAATG+GGG | + | chr2_1:73801885-73801904 | None:intergenic | 20.0% |
| !! | GGATACAAAAGTTTATAAAT+GGG | + | chr2_1:73801886-73801905 | None:intergenic | 20.0% |
| !! | AGGATACAAAAGTTTATAAA+TGG | + | chr2_1:73801887-73801906 | None:intergenic | 20.0% |
| !!! | TATTATAGTTTTCGTATAAC+TGG | - | chr2_1:73802112-73802131 | Msa0224080:intron | 20.0% |
| ! | ATAAATAGTTTAACCAGTGT+TGG | - | chr2_1:73797438-73797457 | Msa0224080:CDS | 25.0% |
| ! | TGTTCAAATATCATTTCTTG+AGG | + | chr2_1:73797626-73797645 | None:intergenic | 25.0% |
| ! | TCACAAAAGTTGTCAAAAAA+TGG | + | chr2_1:73797650-73797669 | None:intergenic | 25.0% |
| ! | AAGTATAGTATAGTTGTAGA+TGG | + | chr2_1:73797822-73797841 | None:intergenic | 25.0% |
| ! | TATACTTTATGAGTGTCAAA+CGG | - | chr2_1:73797835-73797854 | Msa0224080:CDS | 25.0% |
| !! | CTTTGTTTGACAAAAAATAG+CGG | - | chr2_1:73797947-73797966 | Msa0224080:CDS | 25.0% |
| !! | TCCGTTATAAATTAGTTTAC+TGG | + | chr2_1:73797977-73797996 | None:intergenic | 25.0% |
| ! | TCAAGTGAAATGAGAAAAAT+AGG | - | chr2_1:73798141-73798160 | Msa0224080:intron | 25.0% |
| ! | GTTCAATTTCACTATAATGT+TGG | + | chr2_1:73798406-73798425 | None:intergenic | 25.0% |
| ! | AATTGAACTTGAATCTCTTA+TGG | - | chr2_1:73798418-73798437 | Msa0224080:CDS | 25.0% |
| !!! | TTATGGTTTGTTTGATTAGA+GGG | - | chr2_1:73798435-73798454 | Msa0224080:CDS | 25.0% |
| !!! | AGATCTTGTTCATTTTTTGA+GGG | - | chr2_1:73798502-73798521 | Msa0224080:intron | 25.0% |
| !!! | CATATTTTAGTATACTTTGG+TGG | + | chr2_1:73798810-73798829 | None:intergenic | 25.0% |
| !!! | CCACATATTTTAGTATACTT+TGG | + | chr2_1:73798813-73798832 | None:intergenic | 25.0% |
| ! | CCAAAGTATACTAAAATATG+TGG | - | chr2_1:73798810-73798829 | Msa0224080:CDS | 25.0% |
| ! | ACAAAAATGCCCTTAATAAA+TGG | - | chr2_1:73798944-73798963 | Msa0224080:intron | 25.0% |
| ! | CTTTCTCATACCATTTATTA+AGG | + | chr2_1:73798957-73798976 | None:intergenic | 25.0% |
| !! | TCTAAAGTGACTCATAATTT+CGG | - | chr2_1:73799098-73799117 | Msa0224080:intron | 25.0% |
| !!! | TAAACACTTGTTATTGTGTT+TGG | + | chr2_1:73799184-73799203 | None:intergenic | 25.0% |
| !! | GAAATACGGAATTTGAAATT+TGG | - | chr2_1:73799405-73799424 | Msa0224080:intron | 25.0% |
| !!! | TTGGCTTTTACTAATAATGT+TGG | - | chr2_1:73799596-73799615 | Msa0224080:CDS | 25.0% |
| !!! | GTTTTGATTTTGTTAGCAAA+TGG | - | chr2_1:73799687-73799706 | Msa0224080:CDS | 25.0% |
| !! | ATTTTGTTAGCAAATGGAAA+AGG | - | chr2_1:73799693-73799712 | Msa0224080:CDS | 25.0% |
| !! | TTTTGTTAGCAAATGGAAAA+GGG | - | chr2_1:73799694-73799713 | Msa0224080:CDS | 25.0% |
| ! | GAAGAATTGGATAATTTAAG+AGG | - | chr2_1:73800210-73800229 | Msa0224080:intron | 25.0% |
| ! | TATGATGTCTACAATGATTT+AGG | - | chr2_1:73800276-73800295 | Msa0224080:intron | 25.0% |
| !! | TCATCAGATTTTCTTACTTA+TGG | - | chr2_1:73800598-73800617 | Msa0224080:CDS | 25.0% |
| ! | ACTCAATAATGCCATATTTA+AGG | - | chr2_1:73801467-73801486 | Msa0224080:intron | 25.0% |
| !! | TCTTGATTCTTGATGATAAT+AGG | - | chr2_1:73801794-73801813 | Msa0224080:intron | 25.0% |
| !! | TCATCGAAAAAACATTTTTG+TGG | - | chr2_1:73801971-73801990 | Msa0224080:intron | 25.0% |
| !! | CATCGAAAAAACATTTTTGT+GGG | - | chr2_1:73801972-73801991 | Msa0224080:intron | 25.0% |
| !! | ATCGAAAAAACATTTTTGTG+GGG | - | chr2_1:73801973-73801992 | Msa0224080:intron | 25.0% |
| !!! | CTTCTAAAGTTTACAAGAAT+TGG | - | chr2_1:73802016-73802035 | Msa0224080:intron | 25.0% |
| !! | ATAGAAAGGTCTTTAAGTTT+AGG | + | chr2_1:73802157-73802176 | None:intergenic | 25.0% |
| !! | GTTTGTAAACTGTTATTTAG+AGG | - | chr2_1:73802200-73802219 | Msa0224080:intron | 25.0% |
| !! | TAAACTGTTATTTAGAGGAA+TGG | - | chr2_1:73802205-73802224 | Msa0224080:intron | 25.0% |
| !!! | TCATGATGGATTAGATATAT+GGG | - | chr2_1:73802289-73802308 | Msa0224080:intron | 25.0% |
| ! | GTTTAATATTAAACCACCAT+AGG | + | chr2_1:73802555-73802574 | None:intergenic | 25.0% |
| !! | ATAATATCTCTATAACGGAA+AGG | + | chr2_1:73802700-73802719 | None:intergenic | 25.0% |
| !! | CCTTGATAATATCTCTATAA+CGG | + | chr2_1:73802705-73802724 | None:intergenic | 25.0% |
| ! | CTTATTTCCAAACTTCTTAA+AGG | + | chr2_1:73802801-73802820 | None:intergenic | 25.0% |
| AATAGGGGTCATAAGATAAA+AGG | - | chr2_1:73797381-73797400 | Msa0224080:CDS | 30.0% | |
| GATAATCTTACTGCTTTCTT+AGG | - | chr2_1:73797504-73797523 | Msa0224080:CDS | 30.0% | |
| TTATTTGAACAACCATTTGG+TGG | + | chr2_1:73797783-73797802 | None:intergenic | 30.0% | |
| !! | GTGTTATTTGAACAACCATT+TGG | + | chr2_1:73797786-73797805 | None:intergenic | 30.0% |
| TATAGTATAGTTGTAGATGG+AGG | + | chr2_1:73797819-73797838 | None:intergenic | 30.0% | |
| !! | CTTATGGTTTGTTTGATTAG+AGG | - | chr2_1:73798434-73798453 | Msa0224080:CDS | 30.0% |
| !! | TATGGTTTGTTTGATTAGAG+GGG | - | chr2_1:73798436-73798455 | Msa0224080:CDS | 30.0% |
| !!! | GAGATCTTGTTCATTTTTTG+AGG | - | chr2_1:73798501-73798520 | Msa0224080:intron | 30.0% |
| !!! | GATCTTGTTCATTTTTTGAG+GGG | - | chr2_1:73798503-73798522 | Msa0224080:intron | 30.0% |
| ! | AAGCTAATTTTATCTCCCTT+TGG | - | chr2_1:73798551-73798570 | Msa0224080:intron | 30.0% |
| ! | TAATTTTATCTCCCTTTGGA+AGG | - | chr2_1:73798555-73798574 | Msa0224080:intron | 30.0% |
| !! | AATTTTATCTCCCTTTGGAA+GGG | - | chr2_1:73798556-73798575 | Msa0224080:intron | 30.0% |
| !!! | AGAGGGGAAATTTTAATTGA+AGG | + | chr2_1:73798680-73798699 | None:intergenic | 30.0% |
| !! | AGGAGAAGAATTTTAATGGT+GGG | + | chr2_1:73798752-73798771 | None:intergenic | 30.0% |
| !! | AAGGAGAAGAATTTTAATGG+TGG | + | chr2_1:73798753-73798772 | None:intergenic | 30.0% |
| AAGCGTCATATAATTTGAGA+CGG | + | chr2_1:73798856-73798875 | None:intergenic | 30.0% | |
| !! | CTAAAGTGTAAGTAGTTTTG+GGG | + | chr2_1:73799136-73799155 | None:intergenic | 30.0% |
| ! | CCTAAAGTGTAAGTAGTTTT+GGG | + | chr2_1:73799137-73799156 | None:intergenic | 30.0% |
| ! | TCCTAAAGTGTAAGTAGTTT+TGG | + | chr2_1:73799138-73799157 | None:intergenic | 30.0% |
| ! | AAACTACTTACACTTTAGGA+CGG | - | chr2_1:73799138-73799157 | Msa0224080:intron | 30.0% |
| ! | GGTTCAGATAACAATTTGTT+TGG | + | chr2_1:73799214-73799233 | None:intergenic | 30.0% |
| ATTGAAAGAAAACAAGACAG+AGG | - | chr2_1:73799261-73799280 | Msa0224080:intron | 30.0% | |
| ATTTGCATTGAAGTATGAAC+CGG | + | chr2_1:73799370-73799389 | None:intergenic | 30.0% | |
| ATATATACACGTGATTAACC+AGG | - | chr2_1:73799996-73800015 | Msa0224080:CDS | 30.0% | |
| ACACAGGTGTATGAAAAATT+AGG | - | chr2_1:73800023-73800042 | Msa0224080:CDS | 30.0% | |
| ATTATCTTCCTCGTGATTTA+TGG | + | chr2_1:73800124-73800143 | None:intergenic | 30.0% | |
| TTGGATAATTTAAGAGGAGA+TGG | - | chr2_1:73800216-73800235 | Msa0224080:intron | 30.0% | |
| CTACAATGATTTAGGAAATC+CGG | - | chr2_1:73800284-73800303 | Msa0224080:intron | 30.0% | |
| GAAGTTTAACCTTTCCTATT+TGG | + | chr2_1:73800393-73800412 | None:intergenic | 30.0% | |
| TCAAAGCTATCAAACTCATT+TGG | + | chr2_1:73800691-73800710 | None:intergenic | 30.0% | |
| ! | GAAATACCTTGAAGTACTTT+AGG | + | chr2_1:73800841-73800860 | None:intergenic | 30.0% |
| !! | AGATCCAAAAGCACTTAATA+GGG | + | chr2_1:73800909-73800928 | None:intergenic | 30.0% |
| ACTACTCTAAACCAAAAAGT+TGG | - | chr2_1:73801091-73801110 | Msa0224080:intron | 30.0% | |
| ! | GCAAAGAAAATCCAACTTTT+TGG | + | chr2_1:73801105-73801124 | None:intergenic | 30.0% |
| GATCATTGTTTGGTTATTAC+AGG | - | chr2_1:73801189-73801208 | Msa0224080:intron | 30.0% | |
| ACCTAGAACCTAATTTAGAA+GGG | - | chr2_1:73801281-73801300 | Msa0224080:intron | 30.0% | |
| GAGTTTATTCGCCTTAAATA+TGG | + | chr2_1:73801481-73801500 | None:intergenic | 30.0% | |
| ! | AACTTTAGAAGACATTTCCA+TGG | + | chr2_1:73802007-73802026 | None:intergenic | 30.0% |
| ! | TACCTTTTTATAAGATCAGC+AGG | + | chr2_1:73802063-73802082 | None:intergenic | 30.0% |
| !! | CTCATGATGGATTAGATATA+TGG | - | chr2_1:73802288-73802307 | Msa0224080:intron | 30.0% |
| ! | AATTTTGGACAGTATTCCTA+TGG | - | chr2_1:73802536-73802555 | Msa0224080:intron | 30.0% |
| !! | TCGATAAGTGTCTGAAATTT+TGG | + | chr2_1:73802677-73802696 | None:intergenic | 30.0% |
| CCGTTATAGAGATATTATCA+AGG | - | chr2_1:73802702-73802721 | Msa0224080:intron | 30.0% | |
| GGGTCATAAGATAAAAGGAA+CGG | - | chr2_1:73797386-73797405 | Msa0224080:CDS | 35.0% | |
| TCATAAGATAAAAGGAACGG+TGG | - | chr2_1:73797389-73797408 | Msa0224080:CDS | 35.0% | |
| !! | GTTGATGAGAAAGAACGTTT+TGG | - | chr2_1:73797413-73797432 | Msa0224080:CDS | 35.0% |
| ! | AATAGTTTAACCAGTGTTGG+CGG | - | chr2_1:73797441-73797460 | Msa0224080:CDS | 35.0% |
| TCAACTGAAGAGAAACAGAA+CGG | + | chr2_1:73797530-73797549 | None:intergenic | 35.0% | |
| ATTAGTGCAACTAAACCTGA+TGG | - | chr2_1:73797549-73797568 | Msa0224080:CDS | 35.0% | |
| !! | GAAATGAAGAAAGTACCATC+AGG | + | chr2_1:73797567-73797586 | None:intergenic | 35.0% |
| GATCGAGAGAAAAAAACAGT+AGG | - | chr2_1:73798163-73798182 | Msa0224080:intron | 35.0% | |
| !! | ATTTTATCTCCCTTTGGAAG+GGG | - | chr2_1:73798557-73798576 | Msa0224080:intron | 35.0% |
| !!! | CTTGAGTTGAGACTTTTTTG+AGG | - | chr2_1:73798589-73798608 | Msa0224080:intron | 35.0% |
| TAAGGCCGCATTAAATATGA+AGG | + | chr2_1:73798621-73798640 | None:intergenic | 35.0% | |
| ATGCGGCCTTAAATCTTATA+AGG | - | chr2_1:73798630-73798649 | Msa0224080:CDS | 35.0% | |
| TGCGGCCTTAAATCTTATAA+GGG | - | chr2_1:73798631-73798650 | Msa0224080:CDS | 35.0% | |
| !! | TGATTTGTGTTTGGGTTGAT+AGG | + | chr2_1:73798705-73798724 | None:intergenic | 35.0% |
| !! | GGAGAAGAATTTTAATGGTG+GGG | + | chr2_1:73798751-73798770 | None:intergenic | 35.0% |
| TTTAGTATACTTTGGTGGGA+AGG | + | chr2_1:73798805-73798824 | None:intergenic | 35.0% | |
| CCCAAAACTACTTACACTTT+AGG | - | chr2_1:73799134-73799153 | Msa0224080:intron | 35.0% | |
| CACACTTACATGTATTGAGT+GGG | + | chr2_1:73799235-73799254 | None:intergenic | 35.0% | |
| CAATACATGTAAGTGTGCTT+AGG | - | chr2_1:73799238-73799257 | Msa0224080:intron | 35.0% | |
| TCACCAATTCCACACATTTA+TGG | - | chr2_1:73799312-73799331 | Msa0224080:CDS | 35.0% | |
| CTTCCATAAATGTGTGGAAT+TGG | + | chr2_1:73799318-73799337 | None:intergenic | 35.0% | |
| AGACTTGCATCATATTCGTA+CGG | + | chr2_1:73799517-73799536 | None:intergenic | 35.0% | |
| GGTAATTATACCTTCCAGAA+AGG | + | chr2_1:73799736-73799755 | None:intergenic | 35.0% | |
| AATTACCTCGTTACCAACAT+TGG | - | chr2_1:73799749-73799768 | Msa0224080:CDS | 35.0% | |
| ATTACCTCGTTACCAACATT+GGG | - | chr2_1:73799750-73799769 | Msa0224080:CDS | 35.0% | |
| ! | TTTTGAATGGGATGATGACA+TGG | - | chr2_1:73799800-73799819 | Msa0224080:intron | 35.0% |
| TTTGAATGGGATGATGACAT+GGG | - | chr2_1:73799801-73799820 | Msa0224080:intron | 35.0% | |
| TTCTTGATGTAAAATGCTCC+AGG | + | chr2_1:73799831-73799850 | None:intergenic | 35.0% | |
| CTTGAAGACATTCCAAATCA+TGG | - | chr2_1:73799888-73799907 | Msa0224080:intron | 35.0% | |
| AAGTAGATGCTTCCATGATT+TGG | + | chr2_1:73799903-73799922 | None:intergenic | 35.0% | |
| GTGTTTGGCATTATAAATCC+AGG | + | chr2_1:73799937-73799956 | None:intergenic | 35.0% | |
| ACTTTAAGCCATAAATCACG+AGG | - | chr2_1:73800113-73800132 | Msa0224080:CDS | 35.0% | |
| ATATCTTCCTAGTGAAACAC+CGG | - | chr2_1:73800164-73800183 | Msa0224080:intron | 35.0% | |
| !! | TCTTCTCTGTAATGGACTAA+TGG | + | chr2_1:73800192-73800211 | None:intergenic | 35.0% |
| CCAATTCTTCTTCTCTGTAA+TGG | + | chr2_1:73800200-73800219 | None:intergenic | 35.0% | |
| CCATTACAGAGAAGAAGAAT+TGG | - | chr2_1:73800197-73800216 | Msa0224080:intron | 35.0% | |
| AATTTAAGAGGAGATGGAAC+AGG | - | chr2_1:73800222-73800241 | Msa0224080:intron | 35.0% | |
| ATGAATATCCTTATCCTCGT+AGG | - | chr2_1:73800349-73800368 | Msa0224080:CDS | 35.0% | |
| TGAATATCCTTATCCTCGTA+GGG | - | chr2_1:73800350-73800369 | Msa0224080:CDS | 35.0% | |
| GAAAGCAGTATCTCAAAATG+TGG | - | chr2_1:73800624-73800643 | Msa0224080:intron | 35.0% | |
| AGATTACAGACTCTAATGCT+GGG | + | chr2_1:73800651-73800670 | None:intergenic | 35.0% | |
| AAGATTACAGACTCTAATGC+TGG | + | chr2_1:73800652-73800671 | None:intergenic | 35.0% | |
| !! | GATAGCTTTGATGAAGTTCA+TGG | - | chr2_1:73800700-73800719 | Msa0224080:intron | 35.0% |
| ! | TGAAGTTCATGGATTGTATG+AGG | - | chr2_1:73800711-73800730 | Msa0224080:intron | 35.0% |
| ! | GAAGTTCATGGATTGTATGA+GGG | - | chr2_1:73800712-73800731 | Msa0224080:intron | 35.0% |
| ATCTTGCTAAGTACATCTGT+TGG | + | chr2_1:73800751-73800770 | None:intergenic | 35.0% | |
| ATTTCTTTGAGCACAGGTAA+TGG | + | chr2_1:73800778-73800797 | None:intergenic | 35.0% | |
| AAAGAAATCTTTCGAACCGA+TGG | - | chr2_1:73800790-73800809 | Msa0224080:intron | 35.0% | |
| ! | ATACCTTGAAGTACTTTAGG+TGG | + | chr2_1:73800838-73800857 | None:intergenic | 35.0% |
| !! | GATCCAAAAGCACTTAATAG+GGG | + | chr2_1:73800908-73800927 | None:intergenic | 35.0% |
| !! | GAGATCCAAAAGCACTTAAT+AGG | + | chr2_1:73800910-73800929 | None:intergenic | 35.0% |
| ! | TGTCATTAGTTCGATGGATT+TGG | - | chr2_1:73801152-73801171 | Msa0224080:intron | 35.0% |
| ! | GTCATTAGTTCGATGGATTT+GGG | - | chr2_1:73801153-73801172 | Msa0224080:intron | 35.0% |
| CTTCATGAAGGATCATTGTT+TGG | - | chr2_1:73801179-73801198 | Msa0224080:intron | 35.0% | |
| AAGCTAGATAGTCAAGTCTA+TGG | - | chr2_1:73801229-73801248 | Msa0224080:intron | 35.0% | |
| !! | ATTAGGTTCTAGGTGTTCTT+TGG | + | chr2_1:73801275-73801294 | None:intergenic | 35.0% |
| CACCTAGAACCTAATTTAGA+AGG | - | chr2_1:73801280-73801299 | Msa0224080:intron | 35.0% | |
| ! | TTTTGTCACTGCTCAAGAAA+AGG | + | chr2_1:73801537-73801556 | None:intergenic | 35.0% |
| !! | AAGGTGTTGACAGTACTATT+TGG | - | chr2_1:73801647-73801666 | Msa0224080:intron | 35.0% |
| TGACAGTACTATTTGGTTAC+TGG | - | chr2_1:73801654-73801673 | Msa0224080:intron | 35.0% | |
| ! | TACTATTTGGTTACTGGCTA+AGG | - | chr2_1:73801660-73801679 | Msa0224080:intron | 35.0% |
| CTGTTAGTTGCTATGACAAA+TGG | + | chr2_1:73801844-73801863 | None:intergenic | 35.0% | |
| TTCATTGTATCACGATAGTG+AGG | + | chr2_1:73801907-73801926 | None:intergenic | 35.0% | |
| TGCCTGCTGATCTTATAAAA+AGG | - | chr2_1:73802058-73802077 | Msa0224080:intron | 35.0% | |
| ATTTAGAGGAATGGCAATTG+AGG | - | chr2_1:73802214-73802233 | Msa0224080:intron | 35.0% | |
| CTAATCCATCATGAGCATAA+GGG | + | chr2_1:73802283-73802302 | None:intergenic | 35.0% | |
| TCTAATCCATCATGAGCATA+AGG | + | chr2_1:73802284-73802303 | None:intergenic | 35.0% | |
| TTGTCTAAGTATGTCATCTG+TGG | + | chr2_1:73802360-73802379 | None:intergenic | 35.0% | |
| AAGTTTGCACTACTGTCATA+TGG | - | chr2_1:73802486-73802505 | Msa0224080:intron | 35.0% | |
| ! | CTTCATGCAGCTGTTAATTT+TGG | - | chr2_1:73802521-73802540 | Msa0224080:intron | 35.0% |
| ATGAATCTCCTACTAAGAGT+TGG | + | chr2_1:73802581-73802600 | None:intergenic | 35.0% | |
| AAACTGGACATCAGATACAA+GGG | - | chr2_1:73802766-73802785 | Msa0224080:CDS | 35.0% | |
| ! | TTAGAGGCCTTTAAGAAGTT+TGG | - | chr2_1:73802791-73802810 | Msa0224080:CDS | 35.0% |
| ! | AAAGTATAAGGCATCTGAAC+CGG | + | chr2_1:73802890-73802909 | None:intergenic | 35.0% |
| GAAGGATGAAGCAAAGTATA+AGG | + | chr2_1:73802902-73802921 | None:intergenic | 35.0% | |
| ! | CCATTTGGTGGACAACTTAT+GGG | + | chr2_1:73797771-73797790 | None:intergenic | 40.0% |
| ! | ACCATTTGGTGGACAACTTA+TGG | + | chr2_1:73797772-73797791 | None:intergenic | 40.0% |
| GTTGTAGATGGAGGAAATTG+AGG | + | chr2_1:73797810-73797829 | None:intergenic | 40.0% | |
| ACTTTATGAGTGTCAAACGG+AGG | - | chr2_1:73797838-73797857 | Msa0224080:CDS | 40.0% | |
| CTTTATGAGTGTCAAACGGA+GGG | - | chr2_1:73797839-73797858 | Msa0224080:CDS | 40.0% | |
| TTTGATTAGAGGGGAGAAAG+AGG | - | chr2_1:73798445-73798464 | Msa0224080:CDS | 40.0% | |
| !!! | TCATTTTTTGAGGGGAAGTG+AGG | - | chr2_1:73798511-73798530 | Msa0224080:intron | 40.0% |
| CAAAAACTTCCCCTTCCAAA+GGG | + | chr2_1:73798569-73798588 | None:intergenic | 40.0% | |
| !! | TTTGGGTTGATAGGATAGAG+GGG | + | chr2_1:73798696-73798715 | None:intergenic | 40.0% |
| !! | GTTTGGGTTGATAGGATAGA+GGG | + | chr2_1:73798697-73798716 | None:intergenic | 40.0% |
| !! | TGTTTGGGTTGATAGGATAG+AGG | + | chr2_1:73798698-73798717 | None:intergenic | 40.0% |
| !! | GAAGAATTTTAATGGTGGGG+AGG | + | chr2_1:73798748-73798767 | None:intergenic | 40.0% |
| ! | CGTCATATAATTTGAGACGG+AGG | + | chr2_1:73798853-73798872 | None:intergenic | 40.0% |
| !! | TACTTACACTTTAGGACGGA+GGG | - | chr2_1:73799142-73799161 | Msa0224080:intron | 40.0% |
| GCACACTTACATGTATTGAG+TGG | + | chr2_1:73799236-73799255 | None:intergenic | 40.0% | |
| GTAGTGCTTCCATAAATGTG+TGG | + | chr2_1:73799324-73799343 | None:intergenic | 40.0% | |
| !! | TTATGGAAGCACTACGACAA+TGG | - | chr2_1:73799329-73799348 | Msa0224080:intron | 40.0% |
| CTTCAAGAGTCAAACTCACA+AGG | + | chr2_1:73799875-73799894 | None:intergenic | 40.0% | |
| TCTACTTTGTATGCAACTCC+TGG | - | chr2_1:73799916-73799935 | Msa0224080:intron | 40.0% | |
| AGAAAATGCGGTCAAGTTTG+TGG | + | chr2_1:73799959-73799978 | None:intergenic | 40.0% | |
| CCTTGTTGGCAAAGAAAATG+CGG | + | chr2_1:73799971-73799990 | None:intergenic | 40.0% | |
| GATTTAGGAAATCCGGAGAA+AGG | - | chr2_1:73800291-73800310 | Msa0224080:intron | 40.0% | |
| ! | GCATGATTTTCACCTTTCTC+CGG | + | chr2_1:73800306-73800325 | None:intergenic | 40.0% |
| GAATATCCTTATCCTCGTAG+GGG | - | chr2_1:73800351-73800370 | Msa0224080:CDS | 40.0% | |
| AATATCCTTATCCTCGTAGG+GGG | - | chr2_1:73800352-73800371 | Msa0224080:CDS | 40.0% | |
| CAGATCCTAAAAGTGAGAGT+AGG | - | chr2_1:73800527-73800546 | Msa0224080:CDS | 40.0% | |
| !! | TCACTCCTACTCTCACTTTT+AGG | + | chr2_1:73800535-73800554 | None:intergenic | 40.0% |
| ! | CTTCCAAGAGATGAAGCTTT+TGG | - | chr2_1:73800565-73800584 | Msa0224080:CDS | 40.0% |
| TGACCAAAAGCTTCATCTCT+TGG | + | chr2_1:73800571-73800590 | None:intergenic | 40.0% | |
| CGAAAGATTTCTTTGAGCAC+AGG | + | chr2_1:73800784-73800803 | None:intergenic | 40.0% | |
| ! | ATGCCCCTATTAAGTGCTTT+TGG | - | chr2_1:73800902-73800921 | Msa0224080:intron | 40.0% |
| TTTGCAAGAGAAATGCTTGC+TGG | - | chr2_1:73801012-73801031 | Msa0224080:intron | 40.0% | |
| TGAAGACAGCAGATCACATT+TGG | + | chr2_1:73801045-73801064 | None:intergenic | 40.0% | |
| AAATGTGATCTGCTGTCTTC+AGG | - | chr2_1:73801044-73801063 | Msa0224080:intron | 40.0% | |
| GATCGATGTCATTAGTTCGA+TGG | - | chr2_1:73801146-73801165 | Msa0224080:intron | 40.0% | |
| GCCCTTCTAAATTAGGTTCT+AGG | + | chr2_1:73801285-73801304 | None:intergenic | 40.0% | |
| ACTGTGAGCCCTTCTAAATT+AGG | + | chr2_1:73801292-73801311 | None:intergenic | 40.0% | |
| TTGAGTCATGATGATCTAGC+AGG | + | chr2_1:73801453-73801472 | None:intergenic | 40.0% | |
| AATAAACTCGACTCCAACGA+AGG | - | chr2_1:73801492-73801511 | Msa0224080:intron | 40.0% | |
| !! | TGACAAAACTTTGAAGCCAC+TGG | - | chr2_1:73801549-73801568 | Msa0224080:intron | 40.0% |
| ATCATCAACTTGTCAGCCAT+TGG | - | chr2_1:73801710-73801729 | Msa0224080:intron | 40.0% | |
| TTTGTGGGGAAGATATTCCA+TGG | - | chr2_1:73801987-73802006 | Msa0224080:intron | 40.0% | |
| TACAAGAATTGGACTTTGCC+AGG | - | chr2_1:73802027-73802046 | Msa0224080:intron | 40.0% | |
| GATTACCCTTATGCTCATGA+TGG | - | chr2_1:73802275-73802294 | Msa0224080:intron | 40.0% | |
| AGTACAAGGAGACATAGTCT+TGG | + | chr2_1:73802334-73802353 | None:intergenic | 40.0% | |
| AAGATTCTGAACTCCAAGCT+TGG | - | chr2_1:73802378-73802397 | Msa0224080:intron | 40.0% | |
| TTGGTGGAAAGAACTTGTAG+AGG | - | chr2_1:73802397-73802416 | Msa0224080:intron | 40.0% | |
| TGGAAAGAACTTGTAGAGGT+TGG | - | chr2_1:73802401-73802420 | Msa0224080:intron | 40.0% | |
| TTTGGACAGTATTCCTATGG+TGG | - | chr2_1:73802539-73802558 | Msa0224080:intron | 40.0% | |
| TAAACCGTCCAACTCTTAGT+AGG | - | chr2_1:73802570-73802589 | Msa0224080:intron | 40.0% | |
| ATCTCCTACTAAGAGTTGGA+CGG | + | chr2_1:73802577-73802596 | None:intergenic | 40.0% | |
| GCTAGTCAAAAGTCCACAAA+AGG | - | chr2_1:73802631-73802650 | Msa0224080:intron | 40.0% | |
| ! | GTCTTCAAGTATGCCTTTTG+TGG | + | chr2_1:73802647-73802666 | None:intergenic | 40.0% |
| CTTGTATCTGATGTCCAGTT+TGG | + | chr2_1:73802767-73802786 | None:intergenic | 40.0% | |
| CAAACTGGACATCAGATACA+AGG | - | chr2_1:73802765-73802784 | Msa0224080:CDS | 40.0% | |
| !! | ATCAGATACAAGGGCATTAG+AGG | - | chr2_1:73802775-73802794 | Msa0224080:CDS | 40.0% |
| TTTGCTTCATCCTTCTAGTG+AGG | - | chr2_1:73802907-73802926 | Msa0224080:CDS | 40.0% | |
| !! | GAGGAAGGACTTACTTTTAG+AGG | - | chr2_1:73802926-73802945 | Msa0224080:CDS | 40.0% |
| !! | GGTGACGGGGATATTGAATA+GGG | - | chr2_1:73797365-73797384 | Msa0224080:CDS | 45.0% |
| ! | GTGACGGGGATATTGAATAG+GGG | - | chr2_1:73797366-73797385 | Msa0224080:CDS | 45.0% |
| GGTCAAGGTTTCGACATTCT+TGG | - | chr2_1:73797471-73797490 | Msa0224080:CDS | 45.0% | |
| CCCATAAGTTGTCCACCAAA+TGG | - | chr2_1:73797768-73797787 | Msa0224080:CDS | 45.0% | |
| GCAAAAACTTCCCCTTCCAA+AGG | + | chr2_1:73798570-73798589 | None:intergenic | 45.0% | |
| !! | CTACTTACACTTTAGGACGG+AGG | - | chr2_1:73799141-73799160 | Msa0224080:intron | 45.0% |
| ATGGCTGTTGGATCAAGATC+CGG | - | chr2_1:73799348-73799367 | Msa0224080:intron | 45.0% | |
| TTTATGCACTCTGCGTACGT+TGG | + | chr2_1:73799462-73799481 | None:intergenic | 45.0% | |
| GCATCATATTCGTACGGACT+TGG | + | chr2_1:73799511-73799530 | None:intergenic | 45.0% | |
| GCAAATGGAAAAGGGAAGCT+TGG | - | chr2_1:73799702-73799721 | Msa0224080:CDS | 45.0% | |
| TGGAAAAGGGAAGCTTGGAA+AGG | - | chr2_1:73799707-73799726 | Msa0224080:CDS | 45.0% | |
| GATGATGACATGGGAATTCC+TGG | - | chr2_1:73799810-73799829 | Msa0224080:intron | 45.0% | |
| ! | CCGCATTTTCTTTGCCAACA+AGG | - | chr2_1:73799968-73799987 | Msa0224080:CDS | 45.0% |
| ! | TGATTAACCAGGTGTCACAC+AGG | - | chr2_1:73800007-73800026 | Msa0224080:CDS | 45.0% |
| !! | CTGTAATGGACTAATGGAGC+CGG | + | chr2_1:73800186-73800205 | None:intergenic | 45.0% |
| AACAGGAGAACGCAAAGAGT+GGG | - | chr2_1:73800239-73800258 | Msa0224080:intron | 45.0% | |
| AATCATGCTCGTCCTGTTCT+TGG | - | chr2_1:73800318-73800337 | Msa0224080:intron | 45.0% | |
| GAACTGGCAGAAAGCCAAAT+AGG | - | chr2_1:73800376-73800395 | Msa0224080:CDS | 45.0% | |
| GGCAGAAAGCCAAATAGGAA+AGG | - | chr2_1:73800381-73800400 | Msa0224080:CDS | 45.0% | |
| ! | GTTCATGGATTGTATGAGGG+TGG | - | chr2_1:73800715-73800734 | Msa0224080:intron | 45.0% |
| CTTGAGGAACTGTTCACCAT+CGG | + | chr2_1:73800809-73800828 | None:intergenic | 45.0% | |
| !! | CTTTAGGTGGTGGATACTTG+AGG | + | chr2_1:73800825-73800844 | None:intergenic | 45.0% |
| ! | CCTTGAAGTACTTTAGGTGG+TGG | + | chr2_1:73800835-73800854 | None:intergenic | 45.0% |
| ! | CCACCACCTAAAGTACTTCA+AGG | - | chr2_1:73800832-73800851 | Msa0224080:intron | 45.0% |
| GAACAGTAAGTAGGTCTGCA+TGG | - | chr2_1:73800974-73800993 | Msa0224080:intron | 45.0% | |
| !! | TGACTATCTAGCTTGCTTCG+CGG | + | chr2_1:73801223-73801242 | None:intergenic | 45.0% |
| GTCACTGCTCAAGAAAAGGA+TGG | + | chr2_1:73801533-73801552 | None:intergenic | 45.0% | |
| AAACTCAACTCTATGGCCAG+TGG | + | chr2_1:73801568-73801587 | None:intergenic | 45.0% | |
| GTGTGGCAAACTCAACTCTA+TGG | + | chr2_1:73801575-73801594 | None:intergenic | 45.0% | |
| !! | GCTGACAAGTTGATGATAGC+AGG | + | chr2_1:73801707-73801726 | None:intergenic | 45.0% |
| TTAACACCACATGGGGAAGA+TGG | + | chr2_1:73802242-73802261 | None:intergenic | 45.0% | |
| CACAAGCTTAACACCACATG+GGG | + | chr2_1:73802249-73802268 | None:intergenic | 45.0% | |
| CCACAAGCTTAACACCACAT+GGG | + | chr2_1:73802250-73802269 | None:intergenic | 45.0% | |
| ACCACAAGCTTAACACCACA+TGG | + | chr2_1:73802251-73802270 | None:intergenic | 45.0% | |
| ! | TGGTGTTAAGCTTGTGGTAG+AGG | - | chr2_1:73802253-73802272 | Msa0224080:intron | 45.0% |
| ! | TATGGGCTGCCATAAAGACA+TGG | - | chr2_1:73802306-73802325 | Msa0224080:intron | 45.0% |
| ! | ATGGGCTGCCATAAAGACAT+GGG | - | chr2_1:73802307-73802326 | Msa0224080:intron | 45.0% |
| GTCTTGGACCCATGTCTTTA+TGG | + | chr2_1:73802318-73802337 | None:intergenic | 45.0% | |
| ATTCTGAACTCCAAGCTTGG+TGG | - | chr2_1:73802381-73802400 | Msa0224080:intron | 45.0% | |
| CAAGTTCTTTCCACCAAGCT+TGG | + | chr2_1:73802394-73802413 | None:intergenic | 45.0% | |
| ! | GAACTTGTAGAGGTTGGTCA+TGG | - | chr2_1:73802407-73802426 | Msa0224080:intron | 45.0% |
| ATAAGAAAAACGAGCCGTGG+TGG | - | chr2_1:73802432-73802451 | Msa0224080:intron | 45.0% | |
| TCTTCACGAGCTTGCATCTT+AGG | + | chr2_1:73802458-73802477 | None:intergenic | 45.0% | |
| AGGAGATTCATGCCAGAGAA+AGG | - | chr2_1:73802590-73802609 | Msa0224080:intron | 45.0% | |
| GGAGATTCATGCCAGAGAAA+GGG | - | chr2_1:73802591-73802610 | Msa0224080:intron | 45.0% | |
| TATTCAGCTGACCCTTTCTC+TGG | + | chr2_1:73802605-73802624 | None:intergenic | 45.0% | |
| GCTTCTGATGAAGTGTACCT+TGG | - | chr2_1:73802728-73802747 | Msa0224080:intron | 45.0% | |
| TTGGATTGTCTCTCTCTCCA+AGG | + | chr2_1:73802748-73802767 | None:intergenic | 45.0% | |
| GAGAGAGAGACAATCCAAAC+TGG | - | chr2_1:73802750-73802769 | Msa0224080:intron | 45.0% | |
| CTTCATCCTTCTAGTGAGGA+AGG | - | chr2_1:73802911-73802930 | Msa0224080:CDS | 45.0% | |
| GTAAGTCCTTCCTCACTAGA+AGG | + | chr2_1:73802920-73802939 | None:intergenic | 45.0% | |
| !!! | AAAGATTTTATTTATTTTTT+CGG | + | chr2_1:73798780-73798799 | None:intergenic | 5.0% |
| !!! | TACATTTAATAATTTTTATT+TGG | - | chr2_1:73799665-73799684 | Msa0224080:CDS | 5.0% |
| !! | GGGTGACGGGGATATTGAAT+AGG | - | chr2_1:73797364-73797383 | Msa0224080:CDS | 50.0% |
| !! | ACCAGTGTTGGCGGAGTTAT+TGG | - | chr2_1:73797450-73797469 | Msa0224080:CDS | 50.0% |
| ACCAATAACTCCGCCAACAC+TGG | + | chr2_1:73797454-73797473 | None:intergenic | 50.0% | |
| GTTGGCGGAGTTATTGGTCA+AGG | - | chr2_1:73797456-73797475 | Msa0224080:CDS | 50.0% | |
| ! | ATGGTGGGGAGGCAAATGAA+GGG | + | chr2_1:73798737-73798756 | None:intergenic | 50.0% |
| ! | AATGGTGGGGAGGCAAATGA+AGG | + | chr2_1:73798738-73798757 | None:intergenic | 50.0% |
| AGCACTACGACAATGGCTGT+TGG | - | chr2_1:73799336-73799355 | Msa0224080:intron | 50.0% | |
| GCTTGGAAAGGCTACCTTTC+TGG | - | chr2_1:73799719-73799738 | Msa0224080:CDS | 50.0% | |
| GGAAAGGCTACCTTTCTGGA+AGG | - | chr2_1:73799723-73799742 | Msa0224080:CDS | 50.0% | |
| !! | TGCTCCCAATGTTGGTAACG+AGG | + | chr2_1:73799757-73799776 | None:intergenic | 50.0% |
| TCGTTACCAACATTGGGAGC+AGG | - | chr2_1:73799756-73799775 | Msa0224080:CDS | 50.0% | |
| GATTGTCCTGCTCCCAATGT+TGG | + | chr2_1:73799765-73799784 | None:intergenic | 50.0% | |
| GCGGTCAAGTTTGTGGTGTT+TGG | + | chr2_1:73799952-73799971 | None:intergenic | 50.0% | |
| TCATACACCTGTGTGACACC+TGG | + | chr2_1:73800017-73800036 | None:intergenic | 50.0% | |
| AATGGAGCCGGTGTTTCACT+AGG | + | chr2_1:73800174-73800193 | None:intergenic | 50.0% | |
| GAACAGGAGAACGCAAAGAG+TGG | - | chr2_1:73800238-73800257 | Msa0224080:intron | 50.0% | |
| GAGAACGCAAAGAGTGGGAA+AGG | - | chr2_1:73800244-73800263 | Msa0224080:intron | 50.0% | |
| ATGCTCGTCCTGTTCTTGGA+GGG | - | chr2_1:73800322-73800341 | Msa0224080:intron | 50.0% | |
| TCATCAGACCCTCCAAGAAC+AGG | + | chr2_1:73800333-73800352 | None:intergenic | 50.0% | |
| GGATTTGGGCGACTTCATGA+AGG | - | chr2_1:73801167-73801186 | Msa0224080:intron | 50.0% | |
| !! | TATCTAGCTTGCTTCGCGGA+GGG | + | chr2_1:73801219-73801238 | None:intergenic | 50.0% |
| AGAAGGGCTCACAGTAGAAG+AGG | - | chr2_1:73801297-73801316 | Msa0224080:intron | 50.0% | |
| CGAGTAGCATAAGCCTTCGT+TGG | + | chr2_1:73801508-73801527 | None:intergenic | 50.0% | |
| TTGAGTTTGCCACACCCTGA+CGG | - | chr2_1:73801580-73801599 | Msa0224080:intron | 50.0% | |
| CACCATGTTCATCTCCGTCA+GGG | + | chr2_1:73801597-73801616 | None:intergenic | 50.0% | |
| GTTTATCAACCCGCGCTAGA+AGG | - | chr2_1:73801628-73801647 | Msa0224080:intron | 50.0% | |
| ACTGTCAACACCTTCTAGCG+CGG | + | chr2_1:73801641-73801660 | None:intergenic | 50.0% | |
| TTCTCTTGCTCGACAATCCC+TGG | - | chr2_1:73801933-73801952 | Msa0224080:intron | 50.0% | |
| GATACCTCCATCGTTGACCA+GGG | + | chr2_1:73801953-73801972 | None:intergenic | 50.0% | |
| TGATACCTCCATCGTTGACC+AGG | + | chr2_1:73801954-73801973 | None:intergenic | 50.0% | |
| ! | CCCATGTGGTGTTAAGCTTG+TGG | - | chr2_1:73802247-73802266 | Msa0224080:intron | 50.0% |
| GCGATAAGAAAAACGAGCCG+TGG | - | chr2_1:73802429-73802448 | Msa0224080:intron | 50.0% | |
| GAGAAGCTAAGACACCGTCT+TGG | - | chr2_1:73802863-73802882 | Msa0224080:CDS | 50.0% | |
| CATGCTCGTCCTGTTCTTGG+AGG | - | chr2_1:73800321-73800340 | Msa0224080:intron | 55.0% | |
| GTTCTCCCCCTACGAGGATA+AGG | + | chr2_1:73800360-73800379 | None:intergenic | 55.0% | |
| TATCCTCGTAGGGGGAGAAC+TGG | - | chr2_1:73800360-73800379 | Msa0224080:CDS | 55.0% | |
| !! | CTATCTAGCTTGCTTCGCGG+AGG | + | chr2_1:73801220-73801239 | None:intergenic | 55.0% |
| TGTTCATCTCCGTCAGGGTG+TGG | + | chr2_1:73801592-73801611 | None:intergenic | 55.0% | |
| CACCCTGACGGAGATGAACA+TGG | - | chr2_1:73801592-73801611 | Msa0224080:intron | 55.0% | |
| GCACCATGTTCATCTCCGTC+AGG | + | chr2_1:73801598-73801617 | None:intergenic | 55.0% | |
| CTGTCAACACCTTCTAGCGC+GGG | + | chr2_1:73801640-73801659 | None:intergenic | 55.0% | |
| CGACAATCCCTGGTCAACGA+TGG | - | chr2_1:73801943-73801962 | Msa0224080:intron | 55.0% | |
| CAATCCCTGGTCAACGATGG+AGG | - | chr2_1:73801946-73801965 | Msa0224080:intron | 55.0% | |
| TCAGCAGGCAATGCTTGACC+TGG | + | chr2_1:73802048-73802067 | None:intergenic | 55.0% | |
| GAGGATCCATCTTCCCCATG+TGG | - | chr2_1:73802233-73802252 | Msa0224080:intron | 55.0% | |
| GCTTGCATCTTAGGCCACCA+CGG | + | chr2_1:73802449-73802468 | None:intergenic | 55.0% | |
| GCTAAGACACCGTCTTGGAC+CGG | - | chr2_1:73802868-73802887 | Msa0224080:CDS | 55.0% | |
| GCATCTGAACCGGTCCAAGA+CGG | + | chr2_1:73802880-73802899 | None:intergenic | 55.0% | |
| CTGCCAGTTCTCCCCCTACG+AGG | + | chr2_1:73800366-73800385 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73797354 | 73802973 | 73797354 | ID=Msa0224080;Name=Msa0224080 |
| chr2_1 | mRNA | 73797354 | 73802973 | 73797354 | ID=Msa0224080-mRNA-1;Parent=Msa0224080;Name=Msa0224080-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|9|0|861 |
| chr2_1 | exon | 73802757 | 73802973 | 73802757 | ID=Msa0224080-mRNA-1:exon:21757;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73800338 | 73800624 | 73800338 | ID=Msa0224080-mRNA-1:exon:21756;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73799925 | 73800165 | 73799925 | ID=Msa0224080-mRNA-1:exon:21755;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73799474 | 73799797 | 73799474 | ID=Msa0224080-mRNA-1:exon:21754;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73799262 | 73799347 | 73799262 | ID=Msa0224080-mRNA-1:exon:21753;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73799009 | 73799116 | 73799009 | ID=Msa0224080-mRNA-1:exon:21752;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73798596 | 73798900 | 73798596 | ID=Msa0224080-mRNA-1:exon:21751;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73798248 | 73798511 | 73798248 | ID=Msa0224080-mRNA-1:exon:21750;Parent=Msa0224080-mRNA-1 |
| chr2_1 | exon | 73797354 | 73798107 | 73797354 | ID=Msa0224080-mRNA-1:exon:21749;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73802757 | 73802973 | 73802757 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73800338 | 73800624 | 73800338 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73799925 | 73800165 | 73799925 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73799474 | 73799797 | 73799474 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73799262 | 73799347 | 73799262 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73799009 | 73799116 | 73799009 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73798596 | 73798900 | 73798596 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73798248 | 73798511 | 73798248 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| chr2_1 | CDS | 73797354 | 73798107 | 73797354 | ID=Msa0224080-mRNA-1:cds;Parent=Msa0224080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
