Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092840 | XP_013448225.1 | 91.837 | 294 | 22 | 1 | 11 | 304 | 1 | 292 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092840 | A0A072TXT8 | 91.837 | 294 | 22 | 1 | 11 | 304 | 1 | 292 | 0.0 | 553 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1015100 | Msa1092840 | 0.804108 | 2.530992e-49 | -8.615850e-47 |
| Msa1056660 | Msa1092840 | 0.864346 | 1.299276e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092840 | MtrunA17_Chr7g0228251 | 91.837 | 294 | 22 | 1 | 11 | 304 | 1 | 292 | 0.0 | 553 |
| Msa1092840 | MtrunA17_Chr3g0117481 | 48.949 | 333 | 149 | 8 | 16 | 329 | 17 | 347 | 2.39e-96 | 290 |
| Msa1092840 | MtrunA17_Chr4g0058951 | 47.573 | 309 | 139 | 5 | 16 | 304 | 17 | 322 | 1.28e-93 | 283 |
| Msa1092840 | MtrunA17_Chr5g0413351 | 47.492 | 299 | 147 | 4 | 16 | 304 | 2 | 300 | 1.75e-91 | 277 |
| Msa1092840 | MtrunA17_Chr8g0368481 | 46.732 | 306 | 147 | 6 | 13 | 304 | 29 | 332 | 3.30e-89 | 272 |
| Msa1092840 | MtrunA17_Chr8g0368491 | 47.231 | 307 | 146 | 5 | 12 | 304 | 13 | 317 | 1.09e-86 | 265 |
| Msa1092840 | MtrunA17_Chr1g0194161 | 37.374 | 297 | 168 | 3 | 26 | 304 | 5 | 301 | 1.04e-61 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092840 | AT3G27770.1 | 46.667 | 300 | 152 | 3 | 11 | 304 | 1 | 298 | 1.07e-91 | 277 |
| Msa1092840 | AT5G62960.1 | 45.946 | 296 | 155 | 1 | 14 | 304 | 24 | 319 | 2.12e-91 | 278 |
| Msa1092840 | AT5G62960.2 | 47.183 | 284 | 145 | 1 | 16 | 294 | 26 | 309 | 1.13e-89 | 272 |
| Msa1092840 | AT1G10660.2 | 48.667 | 300 | 140 | 4 | 16 | 304 | 2 | 298 | 2.58e-89 | 271 |
| Msa1092840 | AT1G10660.1 | 48.667 | 300 | 140 | 4 | 16 | 304 | 2 | 298 | 2.58e-89 | 271 |
| Msa1092840 | AT1G10660.3 | 48.667 | 300 | 140 | 4 | 16 | 304 | 2 | 298 | 2.58e-89 | 271 |
| Msa1092840 | AT1G10660.4 | 48.667 | 300 | 140 | 4 | 16 | 304 | 2 | 298 | 2.58e-89 | 271 |
| Msa1092840 | AT1G70505.3 | 44.481 | 308 | 145 | 7 | 16 | 304 | 2 | 302 | 2.41e-83 | 256 |
| Msa1092840 | AT1G70505.4 | 44.481 | 308 | 145 | 7 | 16 | 304 | 28 | 328 | 4.81e-83 | 256 |
| Msa1092840 | AT3G27770.2 | 48.511 | 235 | 115 | 1 | 76 | 304 | 21 | 255 | 2.05e-74 | 231 |
| Msa1092840 | AT1G70505.2 | 39.535 | 258 | 130 | 7 | 16 | 254 | 2 | 252 | 6.98e-52 | 173 |
| Msa1092840 | AT1G70505.1 | 39.768 | 259 | 130 | 7 | 16 | 255 | 28 | 279 | 4.07e-50 | 171 |
| Msa1092840 | AT2G47115.1 | 39.344 | 244 | 130 | 3 | 61 | 304 | 49 | 274 | 1.16e-46 | 160 |
Find 80 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCAATATTATCATTTA+AGG | 0.101633 | 7_3:+10727992 | None:intergenic |
| CCCTCGGTTATTGGTTAAAT+TGG | 0.128403 | 7_3:-10729123 | Msa1092840:CDS |
| ACTCTGGTTACAATTTATTT+TGG | 0.161036 | 7_3:-10728266 | Msa1092840:CDS |
| GGATGTCTTTCTTTGTATTA+TGG | 0.197848 | 7_3:-10725532 | Msa1092840:CDS |
| ACTTCAGTGTTGTATTTAAA+AGG | 0.208586 | 7_3:+10725216 | None:intergenic |
| TATCTCATTCTCTTCTCTTT+TGG | 0.217017 | 7_3:-10728906 | Msa1092840:CDS |
| ATTCAACCACCCTCGGTTAT+TGG | 0.234236 | 7_3:-10729132 | Msa1092840:CDS |
| TGCTTACGGATTGCGTTTAT+TGG | 0.249358 | 7_3:-10727182 | Msa1092840:CDS |
| GCCATGACTGACATGGATTT+TGG | 0.268633 | 7_3:+10728871 | None:intergenic |
| TTGATTCTTCTTTATGTTTG+TGG | 0.284407 | 7_3:+10727923 | None:intergenic |
| ACTGTTTAATTGTCGAAATC+TGG | 0.327854 | 7_3:-10724676 | Msa1092840:three_prime_UTR |
| TTAATGCATATTCCATGTTA+TGG | 0.331841 | 7_3:-10724853 | Msa1092840:CDS |
| TCCTTGCATGTCTAACAATA+TGG | 0.334556 | 7_3:-10729060 | Msa1092840:CDS |
| TTCATGCCTGCGTCTCGATT+TGG | 0.352776 | 7_3:-10725478 | Msa1092840:intron |
| AATGATGACAAATCAAGAAA+TGG | 0.363819 | 7_3:+10725363 | None:intergenic |
| CACACAAAGTACTGTCTTGC+TGG | 0.374893 | 7_3:+10728993 | None:intergenic |
| AGATGACCATCCTGATTATC+TGG | 0.376980 | 7_3:+10724646 | None:intergenic |
| TGGTCTGCTGCCAGATAATC+AGG | 0.385360 | 7_3:-10724656 | Msa1092840:three_prime_UTR |
| GCATCTGTGCTATCAGTGTA+TGG | 0.396063 | 7_3:-10728047 | Msa1092840:CDS |
| AGAATCAAATTGCACCCGTT+TGG | 0.406508 | 7_3:-10727908 | Msa1092840:CDS |
| CGAAAAGCTAGCAAACAAAC+AGG | 0.409282 | 7_3:+10728932 | None:intergenic |
| TCTTTCTTTGTATTATGGAC+AGG | 0.416133 | 7_3:-10725527 | Msa1092840:CDS |
| TTCTATCAGGAGGATGCAAC+TGG | 0.419089 | 7_3:-10729167 | Msa1092840:CDS |
| AGTTTAAATCATAATCTCTC+AGG | 0.419431 | 7_3:+10727136 | None:intergenic |
| TTTCAGCGAATACCCTGGTC+TGG | 0.425670 | 7_3:-10725554 | Msa1092840:intron |
| TCTTTATGTTTGTGGCATCC+TGG | 0.429691 | 7_3:+10727931 | None:intergenic |
| ATCTTCTTAGAGTCAAATAC+AGG | 0.431504 | 7_3:-10724729 | Msa1092840:three_prime_UTR |
| TGGTGTAAGAGAGGCACATT+TGG | 0.433186 | 7_3:+10727951 | None:intergenic |
| TAATCTCTCAGGGTAAGAAA+TGG | 0.438837 | 7_3:+10727147 | None:intergenic |
| AGGACCATAGACAGCAAAAC+AGG | 0.451528 | 7_3:+10729079 | None:intergenic |
| GAACTGTAGGTACTTGGTGC+TGG | 0.455698 | 7_3:-10724878 | Msa1092840:intron |
| AAACAGGGTGAATGTCCTTA+AGG | 0.462624 | 7_3:+10728948 | None:intergenic |
| AGCATGGAAGCCATGCCTTA+AGG | 0.467672 | 7_3:-10728963 | Msa1092840:CDS |
| TTCTAGGTGGACCTTCACTC+TGG | 0.473579 | 7_3:-10728282 | Msa1092840:intron |
| TATGGAAGCGTGAAAGTTCA+AGG | 0.480910 | 7_3:-10729042 | Msa1092840:CDS |
| ATGATGACAAATCAAGAAAT+GGG | 0.485295 | 7_3:+10725364 | None:intergenic |
| TCGGTTATTGGTTAAATTGG+AGG | 0.489323 | 7_3:-10729120 | Msa1092840:CDS |
| AATATTATCATTTAAGGTGG+TGG | 0.492685 | 7_3:+10727998 | None:intergenic |
| CGGTTATTGGTTAAATTGGA+GGG | 0.497808 | 7_3:-10729119 | Msa1092840:CDS |
| TGCAGGAGCAGTCATGCTTA+CGG | 0.503796 | 7_3:-10727196 | Msa1092840:CDS |
| ATAACCGAGGGTGGTTGAAT+CGG | 0.515580 | 7_3:+10729135 | None:intergenic |
| GCCAAAATCCATGTCAGTCA+TGG | 0.515953 | 7_3:-10728872 | Msa1092840:CDS |
| TGATGCAGCTTTAAATTGCT+TGG | 0.521829 | 7_3:-10725652 | Msa1092840:intron |
| GATTTCGACAATTAAACAGT+TGG | 0.526698 | 7_3:+10724679 | None:intergenic |
| TGCAATATTATCATTTAAGG+TGG | 0.530243 | 7_3:+10727995 | None:intergenic |
| AACACTATTTCTTATCAAAG+TGG | 0.531764 | 7_3:-10724804 | Msa1092840:CDS |
| TCATAGGTTCTCATTGCTTG+AGG | 0.533287 | 7_3:-10725250 | Msa1092840:intron |
| TTCAGCGAATACCCTGGTCT+GGG | 0.541795 | 7_3:-10725553 | Msa1092840:intron |
| CTTTAGCACTGACAAGAGGA+TGG | 0.554084 | 7_3:+10724778 | None:intergenic |
| GACAAATCAAGAAATGGGTA+AGG | 0.557833 | 7_3:+10725369 | None:intergenic |
| AGCATAAAGAAGCCATAACA+TGG | 0.561498 | 7_3:+10724841 | None:intergenic |
| AAAGAAAGACATCCCAGACC+AGG | 0.566626 | 7_3:+10725541 | None:intergenic |
| AGGAATCTCACATTTGACTA+CGG | 0.575644 | 7_3:-10729022 | Msa1092840:CDS |
| CTTTGTGTGGCGATGAAGCA+TGG | 0.575967 | 7_3:-10728979 | Msa1092840:CDS |
| CATCTGTGCTATCAGTGTAT+GGG | 0.585564 | 7_3:-10728046 | Msa1092840:CDS |
| TCCATATTGTTAGACATGCA+AGG | 0.594278 | 7_3:+10729059 | None:intergenic |
| AAATCCGACTTCGATACCAC+TGG | 0.594814 | 7_3:+10724753 | None:intergenic |
| AGATCCAGTGGTATCGAAGT+CGG | 0.596267 | 7_3:-10724757 | Msa1092840:CDS |
| ATAAATTGTAACCAGAGTGA+AGG | 0.603687 | 7_3:+10728271 | None:intergenic |
| AAATGTGCCTCTCTTACACC+AGG | 0.613144 | 7_3:-10727949 | Msa1092840:CDS |
| GTTTAAATCATAATCTCTCA+GGG | 0.614875 | 7_3:+10727137 | None:intergenic |
| GGGTGAATGTCCTTAAGGCA+TGG | 0.618152 | 7_3:+10728953 | None:intergenic |
| AAATTACCAAATCGAGACGC+AGG | 0.620404 | 7_3:+10725472 | None:intergenic |
| GTGGCATCCTGGTGTAAGAG+AGG | 0.620802 | 7_3:+10727942 | None:intergenic |
| TGTCAGTGCTAAAGATCCAG+TGG | 0.633793 | 7_3:-10724769 | Msa1092840:CDS |
| TTTAGCACTGACAAGAGGAT+GGG | 0.635473 | 7_3:+10724779 | None:intergenic |
| CATCATTGTATGCACCGTTG+TGG | 0.636149 | 7_3:-10725347 | Msa1092840:intron |
| ATTTAACCAATAACCGAGGG+TGG | 0.639151 | 7_3:+10729126 | None:intergenic |
| GGATCTTTAGCACTGACAAG+AGG | 0.641360 | 7_3:+10724774 | None:intergenic |
| GCAAGAATAGATGCAGAGCA+AGG | 0.644774 | 7_3:-10727975 | Msa1092840:CDS |
| ACAACCGATTCAACCACCCT+CGG | 0.647096 | 7_3:-10729139 | Msa1092840:CDS |
| TCCAATTTAACCAATAACCG+AGG | 0.648009 | 7_3:+10729122 | None:intergenic |
| CTGCTGCCAGATAATCAGGA+TGG | 0.654773 | 7_3:-10724652 | Msa1092840:intron |
| AAGAAAGACATCCCAGACCA+GGG | 0.660752 | 7_3:+10725542 | None:intergenic |
| CCAATTTAACCAATAACCGA+GGG | 0.663023 | 7_3:+10729123 | None:intergenic |
| CAGCAAGACAGTACTTTGTG+TGG | 0.666072 | 7_3:-10728992 | Msa1092840:CDS |
| ACATGTTTCAGCGAATACCC+TGG | 0.683223 | 7_3:-10725559 | Msa1092840:intron |
| GAAAAGCTAGCAAACAAACA+GGG | 0.684484 | 7_3:+10728933 | None:intergenic |
| ATATTGTGCCATGACTGACA+TGG | 0.701794 | 7_3:+10728864 | None:intergenic |
| AATGAAATAGCGTACCACAA+CGG | 0.722344 | 7_3:+10725333 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATAAAACAAAAAAATTT+GGG | + | chr7_3:10726180-10726199 | None:intergenic | 10.0% |
| !! | TTTCATAAAACAAAAAAATT+TGG | + | chr7_3:10726181-10726200 | None:intergenic | 10.0% |
| !!! | GTAAATTTATTATTTCTTTA+AGG | - | chr7_3:10726297-10726316 | Msa1092840:intron | 10.0% |
| !! | TTCAAAATTCTAAATAGATT+TGG | + | chr7_3:10725322-10725341 | None:intergenic | 15.0% |
| !! | TACAATTAAATAGAAAAACA+CGG | - | chr7_3:10725905-10725924 | Msa1092840:intron | 15.0% |
| !! | AAAGAAACAAACAAATATAA+GGG | + | chr7_3:10725973-10725992 | None:intergenic | 15.0% |
| !! | TAAAGAAACAAACAAATATA+AGG | + | chr7_3:10725974-10725993 | None:intergenic | 15.0% |
| !!! | TAATTTCTAGAATTTAACAT+CGG | - | chr7_3:10726463-10726482 | Msa1092840:intron | 15.0% |
| !! | AAGAAAACATATTAAAATCA+AGG | + | chr7_3:10726520-10726539 | None:intergenic | 15.0% |
| !! | TAGATATGTTCAATAAAATT+AGG | - | chr7_3:10727018-10727037 | Msa1092840:intron | 15.0% |
| !! | AAAAAAAACATCTATATGTA+AGG | + | chr7_3:10727345-10727364 | None:intergenic | 15.0% |
| !!! | TATTGATTATTCTAATGATT+CGG | + | chr7_3:10727774-10727793 | None:intergenic | 15.0% |
| !! | TGAATATTCTGATTAATATA+TGG | - | chr7_3:10728829-10728848 | Msa1092840:intron | 15.0% |
| !!! | TAGTAGTTATTTTTCTAAGT+TGG | - | chr7_3:10725025-10725044 | Msa1092840:intron | 20.0% |
| !! | GATTCAATTATAATGCTTAA+AGG | + | chr7_3:10725300-10725319 | None:intergenic | 20.0% |
| !! | TCTTGCAATATTATCATTTA+AGG | + | chr7_3:10725766-10725785 | None:intergenic | 20.0% |
| !!! | CATTTTTCAAATTTTATTCC+AGG | - | chr7_3:10725875-10725894 | Msa1092840:intron | 20.0% |
| !! | ATTTAATTGTAGTTAATACC+TGG | + | chr7_3:10725896-10725915 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAGATAGAAGA+TGG | + | chr7_3:10726016-10726035 | None:intergenic | 20.0% |
| !! | AATCATGTTCAATTATATCT+TGG | + | chr7_3:10726204-10726223 | None:intergenic | 20.0% |
| !!! | ATCTGATTTTTCATTCAAAT+AGG | + | chr7_3:10726387-10726406 | None:intergenic | 20.0% |
| !!! | TCAAGGTTACTAAATTTTAA+AGG | - | chr7_3:10727041-10727060 | Msa1092840:intron | 20.0% |
| !! | TAACTGTATTATGATGATTT+AGG | - | chr7_3:10727147-10727166 | Msa1092840:CDS | 20.0% |
| !! | TTCAAATTATTGATCTTCAT+GGG | + | chr7_3:10727377-10727396 | None:intergenic | 20.0% |
| !! | TTTCAAATTATTGATCTTCA+TGG | + | chr7_3:10727378-10727397 | None:intergenic | 20.0% |
| !! | ATGAAGATCAATAATTTGAA+AGG | - | chr7_3:10727377-10727396 | Msa1092840:intron | 20.0% |
| !! | TGAAGATCAATAATTTGAAA+GGG | - | chr7_3:10727378-10727397 | Msa1092840:intron | 20.0% |
| !!! | TACAAATTCAAATTCTAAGA+TGG | - | chr7_3:10727478-10727497 | Msa1092840:intron | 20.0% |
| !! | ATTGATTATTCTAATGATTC+GGG | + | chr7_3:10727773-10727792 | None:intergenic | 20.0% |
| !! | ATACTCGTAATATTTGATAT+AGG | - | chr7_3:10727799-10727818 | Msa1092840:intron | 20.0% |
| !!! | CAAATTGATATGTGATATTT+TGG | - | chr7_3:10727923-10727942 | Msa1092840:CDS | 20.0% |
| !!! | TTATTCTGAATGAAGATTTT+AGG | + | chr7_3:10728144-10728163 | None:intergenic | 20.0% |
| !! | TGATATTATTGAATCATCAT+AGG | - | chr7_3:10728489-10728508 | Msa1092840:intron | 20.0% |
| !! | TATGAAACAGAATAAAAACA+CGG | - | chr7_3:10728569-10728588 | Msa1092840:intron | 20.0% |
| !! | TATTGAGGAATCTTATATTA+TGG | - | chr7_3:10728598-10728617 | Msa1092840:intron | 20.0% |
| !! | TTCAAAACAAAAACGAAAAT+TGG | + | chr7_3:10728860-10728879 | None:intergenic | 20.0% |
| ! | TTATGAACTCGATTTATTTG+TGG | - | chr7_3:10724962-10724981 | Msa1092840:intron | 25.0% |
| ! | TATGAACTCGATTTATTTGT+GGG | - | chr7_3:10724963-10724982 | Msa1092840:intron | 25.0% |
| ! | GATACTTTAAATCAGTGATA+TGG | - | chr7_3:10725231-10725250 | Msa1092840:CDS | 25.0% |
| ! | TGAAACAAATGTCAAAGAAA+TGG | + | chr7_3:10725382-10725401 | None:intergenic | 25.0% |
| !! | TGACATTTGTTTCAAACTTT+TGG | - | chr7_3:10725388-10725407 | Msa1092840:intron | 25.0% |
| ! | ATCGCAATTTATCAATCAAA+TGG | + | chr7_3:10725428-10725447 | None:intergenic | 25.0% |
| !!! | TCTTATTTTGGATTTCTTCT+AGG | - | chr7_3:10725457-10725476 | Msa1092840:intron | 25.0% |
| !! | ACTCTGGTTACAATTTATTT+TGG | - | chr7_3:10725489-10725508 | Msa1092840:CDS | 25.0% |
| !!! | CTCTGGTTACAATTTATTTT+GGG | - | chr7_3:10725490-10725509 | Msa1092840:CDS | 25.0% |
| !!! | TCTGGTTACAATTTATTTTG+GGG | - | chr7_3:10725491-10725510 | Msa1092840:CDS | 25.0% |
| ! | ATGTGATATATGAATAGGAT+TGG | + | chr7_3:10725559-10725578 | None:intergenic | 25.0% |
| ! | GCTAAATGTGATATATGAAT+AGG | + | chr7_3:10725564-10725583 | None:intergenic | 25.0% |
| ! | AAAATACAGTAGTCAGTAAA+AGG | - | chr7_3:10725609-10725628 | Msa1092840:intron | 25.0% |
| !! | AATATTATCATTTAAGGTGG+TGG | + | chr7_3:10725760-10725779 | None:intergenic | 25.0% |
| ! | TGCAATATTATCATTTAAGG+TGG | + | chr7_3:10725763-10725782 | None:intergenic | 25.0% |
| ! | TTGATTCTTCTTTATGTTTG+TGG | + | chr7_3:10725835-10725854 | None:intergenic | 25.0% |
| ! | TTGAAAAATGTAACTCCAAA+CGG | + | chr7_3:10725865-10725884 | None:intergenic | 25.0% |
| ! | AAAAGACTAAAGATTATGGA+TGG | + | chr7_3:10726140-10726159 | None:intergenic | 25.0% |
| ! | GCTTAAAAGACTAAAGATTA+TGG | + | chr7_3:10726144-10726163 | None:intergenic | 25.0% |
| ! | TCATGCATTAGATGAATTAA+AGG | - | chr7_3:10726255-10726274 | Msa1092840:intron | 25.0% |
| ! | CTTGAACTTTACATACTTTA+TGG | - | chr7_3:10726439-10726458 | Msa1092840:intron | 25.0% |
| ! | GTTTAAATCATAATCTCTCA+GGG | + | chr7_3:10726621-10726640 | None:intergenic | 25.0% |
| ! | AGTTTAAATCATAATCTCTC+AGG | + | chr7_3:10726622-10726641 | None:intergenic | 25.0% |
| ! | ATATACTTAGACTGTTATGA+AGG | - | chr7_3:10726748-10726767 | Msa1092840:intron | 25.0% |
| ! | TAGATATCGATCAATAATCA+CGG | - | chr7_3:10726946-10726965 | Msa1092840:intron | 25.0% |
| ! | TCTACTAGAAGATTTGAATT+TGG | + | chr7_3:10727002-10727021 | None:intergenic | 25.0% |
| ! | TGTTCAATAAAATTAGGTCA+AGG | - | chr7_3:10727024-10727043 | Msa1092840:intron | 25.0% |
| ! | ACGTTTATTATTGCATTCTA+AGG | - | chr7_3:10727218-10727237 | Msa1092840:intron | 25.0% |
| ! | TCAAATTATTGATCTTCATG+GGG | + | chr7_3:10727376-10727395 | None:intergenic | 25.0% |
| ! | AAGTCATATATCTTAAAGTC+TGG | - | chr7_3:10727409-10727428 | Msa1092840:intron | 25.0% |
| ! | TTAACTATCTCAATAACAGA+TGG | + | chr7_3:10727607-10727626 | None:intergenic | 25.0% |
| ! | ATAACTCATCCATGAAAATT+TGG | + | chr7_3:10727742-10727761 | None:intergenic | 25.0% |
| ! | ACATGTAATAGAAGAAATGA+GGG | + | chr7_3:10727992-10728011 | None:intergenic | 25.0% |
| ! | CAGACTAAATCTAAATCATT+AGG | + | chr7_3:10728015-10728034 | None:intergenic | 25.0% |
| !!! | CTAAATTTAGTTTTGCTCTT+TGG | - | chr7_3:10728080-10728099 | Msa1092840:intron | 25.0% |
| !! | TCAAATTTTGCAAACACAAT+TGG | - | chr7_3:10728324-10728343 | Msa1092840:intron | 25.0% |
| ! | CACAATTGGTTAACTAAATA+TGG | - | chr7_3:10728338-10728357 | Msa1092840:intron | 25.0% |
| ! | ATGATGACAAATCAAGAAAT+GGG | + | chr7_3:10728394-10728413 | None:intergenic | 25.0% |
| ! | AATGATGACAAATCAAGAAA+TGG | + | chr7_3:10728395-10728414 | None:intergenic | 25.0% |
| !! | TTTCAAATTAAATGATGACG+CGG | - | chr7_3:10728463-10728482 | Msa1092840:intron | 25.0% |
| ! | ACTTCAGTGTTGTATTTAAA+AGG | + | chr7_3:10728542-10728561 | None:intergenic | 25.0% |
| ! | ATGAAACAGAATAAAAACAC+GGG | - | chr7_3:10728570-10728589 | Msa1092840:intron | 25.0% |
| !! | ATTAAGTTGTTTATGCAAAC+AGG | + | chr7_3:10728625-10728644 | None:intergenic | 25.0% |
| ! | TTAATGCATATTCCATGTTA+TGG | - | chr7_3:10728902-10728921 | Msa1092840:CDS | 25.0% |
| !! | AACACTATTTCTTATCAAAG+TGG | - | chr7_3:10728951-10728970 | Msa1092840:CDS | 25.0% |
| !!! | AGCAATGTTGTTTTTCTATC+AGG | - | chr7_3:10724575-10724594 | Msa1092840:three_prime_UTR | 30.0% |
| !!! | AATGTTGTTTTTCTATCAGG+AGG | - | chr7_3:10724578-10724597 | Msa1092840:three_prime_UTR | 30.0% |
| ! | TATCTCATTCTCTTCTCTTT+TGG | - | chr7_3:10724849-10724868 | Msa1092840:CDS | 30.0% |
| !! | GATTGTGAACTCTCTTATTT+TGG | - | chr7_3:10725445-10725464 | Msa1092840:intron | 30.0% |
| !! | TATTTTGGATTTCTTCTAGG+TGG | - | chr7_3:10725460-10725479 | Msa1092840:intron | 30.0% |
| ATAAATTGTAACCAGAGTGA+AGG | + | chr7_3:10725487-10725506 | None:intergenic | 30.0% | |
| TGAAAAATGTAACTCCAAAC+GGG | + | chr7_3:10725864-10725883 | None:intergenic | 30.0% | |
| ACAACAAAACCATGATTTGA+AGG | + | chr7_3:10726072-10726091 | None:intergenic | 30.0% | |
| AGAAGTAGCAATTATGCAAA+TGG | + | chr7_3:10726116-10726135 | None:intergenic | 30.0% | |
| GGGATTAATTTATCAAGCTA+TGG | - | chr7_3:10726339-10726358 | Msa1092840:intron | 30.0% | |
| !!! | GTATTTTAACAGATTAGTGC+AGG | - | chr7_3:10726542-10726561 | Msa1092840:intron | 30.0% |
| ATACCAGTAGCTAATCTAAT+AGG | - | chr7_3:10726721-10726740 | Msa1092840:intron | 30.0% | |
| GGTAAGACAATTGATGAATT+TGG | - | chr7_3:10726790-10726809 | Msa1092840:intron | 30.0% | |
| TACAGTTAAACATGAACTCT+TGG | + | chr7_3:10727135-10727154 | None:intergenic | 30.0% | |
| CATATATCTTAAAGTCTGGA+TGG | - | chr7_3:10727413-10727432 | Msa1092840:intron | 30.0% | |
| AAAGTTAGCTCAATGAGTTA+GGG | + | chr7_3:10727443-10727462 | None:intergenic | 30.0% | |
| AAAAGTTAGCTCAATGAGTT+AGG | + | chr7_3:10727444-10727463 | None:intergenic | 30.0% | |
| ! | CTAACTTTTGTCATCAAGTT+AGG | - | chr7_3:10727455-10727474 | Msa1092840:intron | 30.0% |
| TTGGAAAATTATCCTTCATG+TGG | - | chr7_3:10727573-10727592 | Msa1092840:intron | 30.0% | |
| GTTAATTTCCTTCATTTCAG+TGG | - | chr7_3:10727622-10727641 | Msa1092840:intron | 30.0% | |
| CTCGTAATATTTGATATAGG+TGG | - | chr7_3:10727802-10727821 | Msa1092840:intron | 30.0% | |
| ATTTGATATAGGTGGCATAT+CGG | - | chr7_3:10727810-10727829 | Msa1092840:intron | 30.0% | |
| ! | ATTTAGAATACTGAGACAGA+GGG | + | chr7_3:10727868-10727887 | None:intergenic | 30.0% |
| ! | AATTTAGAATACTGAGACAG+AGG | + | chr7_3:10727869-10727888 | None:intergenic | 30.0% |
| CATGTAATAGAAGAAATGAG+GGG | + | chr7_3:10727991-10728010 | None:intergenic | 30.0% | |
| GACATGTAATAGAAGAAATG+AGG | + | chr7_3:10727993-10728012 | None:intergenic | 30.0% | |
| GGATGTCTTTCTTTGTATTA+TGG | - | chr7_3:10728223-10728242 | Msa1092840:intron | 30.0% | |
| TCTTTCTTTGTATTATGGAC+AGG | - | chr7_3:10728228-10728247 | Msa1092840:intron | 30.0% | |
| ! | GGATATTGAGTTTTTCTACT+AGG | + | chr7_3:10728785-10728804 | None:intergenic | 30.0% |
| TTCAATAGTGAGAGGAAAAT+GGG | + | chr7_3:10728813-10728832 | None:intergenic | 30.0% | |
| ATTCAATAGTGAGAGGAAAA+TGG | + | chr7_3:10728814-10728833 | None:intergenic | 30.0% | |
| TCAGAATATTCAATAGTGAG+AGG | + | chr7_3:10728821-10728840 | None:intergenic | 30.0% | |
| !!! | TCGTTTTTGTTTTGAACTGT+AGG | - | chr7_3:10728864-10728883 | Msa1092840:CDS | 30.0% |
| ATCTTCTTAGAGTCAAATAC+AGG | - | chr7_3:10729026-10729045 | Msa1092840:CDS | 30.0% | |
| GATTTCGACAATTAAACAGT+TGG | + | chr7_3:10729079-10729098 | None:intergenic | 30.0% | |
| ACTGTTTAATTGTCGAAATC+TGG | - | chr7_3:10729079-10729098 | Msa1092840:CDS | 30.0% | |
| CCAATTTAACCAATAACCGA+GGG | + | chr7_3:10724635-10724654 | None:intergenic | 35.0% | |
| TCCAATTTAACCAATAACCG+AGG | + | chr7_3:10724636-10724655 | None:intergenic | 35.0% | |
| ! | TCGGTTATTGGTTAAATTGG+AGG | - | chr7_3:10724635-10724654 | Msa1092840:intron | 35.0% |
| ! | CGGTTATTGGTTAAATTGGA+GGG | - | chr7_3:10724636-10724655 | Msa1092840:intron | 35.0% |
| TCCTTGCATGTCTAACAATA+TGG | - | chr7_3:10724695-10724714 | Msa1092840:three_prime_UTR | 35.0% | |
| TCCATATTGTTAGACATGCA+AGG | + | chr7_3:10724699-10724718 | None:intergenic | 35.0% | |
| AGGAATCTCACATTTGACTA+CGG | - | chr7_3:10724733-10724752 | Msa1092840:exon | 35.0% | |
| GAAAAGCTAGCAAACAAACA+GGG | + | chr7_3:10724825-10724844 | None:intergenic | 35.0% | |
| !! | TTATTGTGGTGCCATAGATT+TGG | - | chr7_3:10724997-10725016 | Msa1092840:intron | 35.0% |
| ! | CCATGTATTTTCCATCTACA+AGG | + | chr7_3:10725138-10725157 | None:intergenic | 35.0% |
| CCTTGTAGATGGAAAATACA+TGG | - | chr7_3:10725135-10725154 | Msa1092840:intron | 35.0% | |
| GTAGATGGAAAATACATGGT+TGG | - | chr7_3:10725139-10725158 | Msa1092840:intron | 35.0% | |
| !! | CACTGATTTAAAGTATCCAC+CGG | + | chr7_3:10725228-10725247 | None:intergenic | 35.0% |
| GTAGTCAGTAAAAGGTTAAC+AGG | - | chr7_3:10725617-10725636 | Msa1092840:intron | 35.0% | |
| TAAATAGAAAAACACGGACC+TGG | - | chr7_3:10725911-10725930 | Msa1092840:intron | 35.0% | |
| AAATAGAAAAACACGGACCT+GGG | - | chr7_3:10725912-10725931 | Msa1092840:intron | 35.0% | |
| TTCTTAGCTCCTTCAAATCA+TGG | - | chr7_3:10726060-10726079 | Msa1092840:intron | 35.0% | |
| ! | TAAGGATCAAAGAGCATAGA+TGG | - | chr7_3:10726315-10726334 | Msa1092840:intron | 35.0% |
| TAATCTCTCAGGGTAAGAAA+TGG | + | chr7_3:10726611-10726630 | None:intergenic | 35.0% | |
| ! | TCACCTATTAGATTAGCTAC+TGG | + | chr7_3:10726727-10726746 | None:intergenic | 35.0% |
| ATCGAGAGTTAGTAAGATAG+TGG | - | chr7_3:10727090-10727109 | Msa1092840:intron | 35.0% | |
| TCGAGAGTTAGTAAGATAGT+GGG | - | chr7_3:10727091-10727110 | Msa1092840:intron | 35.0% | |
| !!! | TCGATATGATCTGTTTTGAC+TGG | - | chr7_3:10727263-10727282 | Msa1092840:intron | 35.0% |
| !!! | ATATGATCTGTTTTGACTGG+AGG | - | chr7_3:10727266-10727285 | Msa1092840:intron | 35.0% |
| AGGCATTAAAATGAGGTCTT+TGG | - | chr7_3:10727286-10727305 | Msa1092840:intron | 35.0% | |
| TATCTCAATAACAGATGGCA+GGG | + | chr7_3:10727602-10727621 | None:intergenic | 35.0% | |
| CTAAGCACTATACGTGATAT+TGG | + | chr7_3:10727694-10727713 | None:intergenic | 35.0% | |
| TATCACGTATAGTGCTTAGA+AGG | - | chr7_3:10727695-10727714 | Msa1092840:intron | 35.0% | |
| ! | TCACCTTCACCAAATTTTCA+TGG | - | chr7_3:10727730-10727749 | Msa1092840:intron | 35.0% |
| ! | CATCCATGAAAATTTGGTGA+AGG | + | chr7_3:10727736-10727755 | None:intergenic | 35.0% |
| !! | TGATGCAGCTTTAAATTGCT+TGG | - | chr7_3:10728103-10728122 | Msa1092840:intron | 35.0% |
| !!! | GTGTTTACGTCATTTTTCAG+TGG | - | chr7_3:10728250-10728269 | Msa1092840:intron | 35.0% |
| GACAAATCAAGAAATGGGTA+AGG | + | chr7_3:10728389-10728408 | None:intergenic | 35.0% | |
| AATGAAATAGCGTACCACAA+CGG | + | chr7_3:10728425-10728444 | None:intergenic | 35.0% | |
| ! | AAGCACTTTGAGAGATCTTA+TGG | + | chr7_3:10728760-10728779 | None:intergenic | 35.0% |
| !! | TGTTTTGAACTGTAGGTACT+TGG | - | chr7_3:10728871-10728890 | Msa1092840:CDS | 35.0% |
| AGCATAAAGAAGCCATAACA+TGG | + | chr7_3:10728917-10728936 | None:intergenic | 35.0% | |
| ATTTAACCAATAACCGAGGG+TGG | + | chr7_3:10724632-10724651 | None:intergenic | 40.0% | |
| ! | CCCTCGGTTATTGGTTAAAT+TGG | - | chr7_3:10724632-10724651 | Msa1092840:intron | 40.0% |
| !! | AGTTCCTGTTTTGCTGTCTA+TGG | - | chr7_3:10724672-10724691 | Msa1092840:three_prime_UTR | 40.0% |
| ! | TATGGAAGCGTGAAAGTTCA+AGG | - | chr7_3:10724713-10724732 | Msa1092840:three_prime_UTR | 40.0% |
| AAACAGGGTGAATGTCCTTA+AGG | + | chr7_3:10724810-10724829 | None:intergenic | 40.0% | |
| CGAAAAGCTAGCAAACAAAC+AGG | + | chr7_3:10724826-10724845 | None:intergenic | 40.0% | |
| ATATTGTGCCATGACTGACA+TGG | + | chr7_3:10724894-10724913 | None:intergenic | 40.0% | |
| CTACTAGCTCACCAAATCTA+TGG | + | chr7_3:10725011-10725030 | None:intergenic | 40.0% | |
| CTAGTGAACCAACATTACGT+TGG | - | chr7_3:10725063-10725082 | Msa1092840:intron | 40.0% | |
| GGATCCCTTAATCAAAGTCT+CGG | - | chr7_3:10725105-10725124 | Msa1092840:intron | 40.0% | |
| GATCCCTTAATCAAAGTCTC+GGG | - | chr7_3:10725106-10725125 | Msa1092840:intron | 40.0% | |
| GAACCCGAGACTTTGATTAA+GGG | + | chr7_3:10725112-10725131 | None:intergenic | 40.0% | |
| TGAACCCGAGACTTTGATTA+AGG | + | chr7_3:10725113-10725132 | None:intergenic | 40.0% | |
| TGGAAAATACATGGTTGGCA+AGG | - | chr7_3:10725144-10725163 | Msa1092840:intron | 40.0% | |
| GGAAAATACATGGTTGGCAA+GGG | - | chr7_3:10725145-10725164 | Msa1092840:intron | 40.0% | |
| CTCCGACTGAGATTAGTAAT+CGG | - | chr7_3:10725197-10725216 | Msa1092840:intron | 40.0% | |
| !! | AATAGGATTGGTTCGATCCA+AGG | + | chr7_3:10725547-10725566 | None:intergenic | 40.0% |
| CATCTGTGCTATCAGTGTAT+GGG | - | chr7_3:10725709-10725728 | Msa1092840:intron | 40.0% | |
| TCTTTATGTTTGTGGCATCC+TGG | + | chr7_3:10725827-10725846 | None:intergenic | 40.0% | |
| AGAATCAAATTGCACCCGTT+TGG | - | chr7_3:10725847-10725866 | Msa1092840:intron | 40.0% | |
| ! | GATCAAAGAGCATAGATGGA+GGG | - | chr7_3:10726319-10726338 | Msa1092840:intron | 40.0% |
| ! | TGCTTACGGATTGCGTTTAT+TGG | - | chr7_3:10726573-10726592 | Msa1092840:intron | 40.0% |
| GTTATGAAGGCTAGAACTTG+AGG | - | chr7_3:10726761-10726780 | Msa1092840:intron | 40.0% | |
| GATGGTCATGATTTCAAGCT+TGG | - | chr7_3:10726881-10726900 | Msa1092840:intron | 40.0% | |
| !! | TAGTAAGATAGTGGGTGTTG+TGG | - | chr7_3:10727099-10727118 | Msa1092840:intron | 40.0% |
| !! | TGACTGGAGGCATTAAAATG+AGG | - | chr7_3:10727279-10727298 | Msa1092840:intron | 40.0% |
| CTATCTCAATAACAGATGGC+AGG | + | chr7_3:10727603-10727622 | None:intergenic | 40.0% | |
| GTGTTGTACCACTGAAATGA+AGG | + | chr7_3:10727633-10727652 | None:intergenic | 40.0% | |
| AATTGATGTGTTGCCCAACT+TGG | - | chr7_3:10727842-10727861 | Msa1092840:intron | 40.0% | |
| TGTTCACTGTCATCTACACA+AGG | + | chr7_3:10728052-10728071 | None:intergenic | 40.0% | |
| AAATTACCAAATCGAGACGC+AGG | + | chr7_3:10728286-10728305 | None:intergenic | 40.0% | |
| GTAACTGTTCTCATTCTTGC+AGG | - | chr7_3:10728360-10728379 | Msa1092840:intron | 40.0% | |
| TCATAGGTTCTCATTGCTTG+AGG | - | chr7_3:10728505-10728524 | Msa1092840:intron | 40.0% | |
| AAAACACGGGTTCTGTATTG+AGG | - | chr7_3:10728583-10728602 | Msa1092840:intron | 40.0% | |
| !! | TTTAGCACTGACAAGAGGAT+GGG | + | chr7_3:10728979-10728998 | None:intergenic | 40.0% |
| AGATGACCATCCTGATTATC+TGG | + | chr7_3:10729112-10729131 | None:intergenic | 40.0% | |
| ! | ACACTTATGAGTCGACTCAT+AGG | + | chr7_3:10729136-10729155 | None:intergenic | 40.0% |
| TTCTATCAGGAGGATGCAAC+TGG | - | chr7_3:10724588-10724607 | Msa1092840:three_prime_UTR | 45.0% | |
| ATAACCGAGGGTGGTTGAAT+CGG | + | chr7_3:10724623-10724642 | None:intergenic | 45.0% | |
| ATTCAACCACCCTCGGTTAT+TGG | - | chr7_3:10724623-10724642 | Msa1092840:intron | 45.0% | |
| AGGACCATAGACAGCAAAAC+AGG | + | chr7_3:10724679-10724698 | None:intergenic | 45.0% | |
| !! | CACACAAAGTACTGTCTTGC+TGG | + | chr7_3:10724765-10724784 | None:intergenic | 45.0% |
| CAGCAAGACAGTACTTTGTG+TGG | - | chr7_3:10724763-10724782 | Msa1092840:CDS | 45.0% | |
| GCCAAAATCCATGTCAGTCA+TGG | - | chr7_3:10724883-10724902 | Msa1092840:intron | 45.0% | |
| ! | GCCATGACTGACATGGATTT+TGG | + | chr7_3:10724887-10724906 | None:intergenic | 45.0% |
| CACTCTGACCAACGTAATGT+TGG | + | chr7_3:10725074-10725093 | None:intergenic | 45.0% | |
| CAACATTACGTTGGTCAGAG+TGG | - | chr7_3:10725072-10725091 | Msa1092840:intron | 45.0% | |
| GGTCAGAGTGGAACTAAACT+TGG | - | chr7_3:10725084-10725103 | Msa1092840:intron | 45.0% | |
| AAATACATGGTTGGCAAGGG+AGG | - | chr7_3:10725148-10725167 | Msa1092840:intron | 45.0% | |
| TATACTGGCCACCTTTAGTG+AGG | + | chr7_3:10725174-10725193 | None:intergenic | 45.0% | |
| TCTCAGTCGGAGAACTATAC+TGG | + | chr7_3:10725189-10725208 | None:intergenic | 45.0% | |
| ! | CGCCGATTACTAATCTCAGT+CGG | + | chr7_3:10725202-10725221 | None:intergenic | 45.0% |
| AGATTAGTAATCGGCGAAGC+CGG | - | chr7_3:10725206-10725225 | Msa1092840:intron | 45.0% | |
| GTATGACTCTTGATTCTCCC+TGG | - | chr7_3:10725513-10725532 | Msa1092840:CDS | 45.0% | |
| GCATCTGTGCTATCAGTGTA+TGG | - | chr7_3:10725708-10725727 | Msa1092840:intron | 45.0% | |
| GCAAGAATAGATGCAGAGCA+AGG | - | chr7_3:10725780-10725799 | Msa1092840:intron | 45.0% | |
| ! | TGGTGTAAGAGAGGCACATT+TGG | + | chr7_3:10725807-10725826 | None:intergenic | 45.0% |
| AAATGTGCCTCTCTTACACC+AGG | - | chr7_3:10725806-10725825 | Msa1092840:intron | 45.0% | |
| GACCTGGGCTTATTGCATTT+CGG | - | chr7_3:10725927-10725946 | Msa1092840:intron | 45.0% | |
| ACCTGGGCTTATTGCATTTC+GGG | - | chr7_3:10725928-10725947 | Msa1092840:intron | 45.0% | |
| ! | GGATCAAAGAGCATAGATGG+AGG | - | chr7_3:10726318-10726337 | Msa1092840:intron | 45.0% |
| ! | GGTGCATGAAGACTGTGTTT+TGG | - | chr7_3:10726360-10726379 | Msa1092840:intron | 45.0% |
| GGCTAGAACTTGAGGCTAAA+TGG | - | chr7_3:10726769-10726788 | Msa1092840:intron | 45.0% | |
| TGAATGCGGGGAATTTGTGA+TGG | + | chr7_3:10726824-10726843 | None:intergenic | 45.0% | |
| GGTGACCTTTGGATCAAGAT+CGG | - | chr7_3:10726859-10726878 | Msa1092840:intron | 45.0% | |
| ACCTTTGGATCAAGATCGGA+TGG | - | chr7_3:10726863-10726882 | Msa1092840:intron | 45.0% | |
| ACCATCCGATCTTGATCCAA+AGG | + | chr7_3:10726867-10726886 | None:intergenic | 45.0% | |
| ATCCACGCTATAGGCTCATT+GGG | - | chr7_3:10727532-10727551 | Msa1092840:intron | 45.0% | |
| GTCTAAGCGTGAGAAACTGT+TGG | - | chr7_3:10727554-10727573 | Msa1092840:intron | 45.0% | |
| ! | GTACAACACCTTTTGTGTGC+TGG | - | chr7_3:10727644-10727663 | Msa1092840:intron | 45.0% |
| TTACTCAGCCAGCACACAAA+AGG | + | chr7_3:10727655-10727674 | None:intergenic | 45.0% | |
| GTATAGTGCTTAGAAGGCTC+AGG | - | chr7_3:10727701-10727720 | Msa1092840:intron | 45.0% | |
| TCACTGTCATCTACACAAGG+AGG | + | chr7_3:10728049-10728068 | None:intergenic | 45.0% | |
| GGGTATTCGCTGAAACATGT+AGG | + | chr7_3:10728196-10728215 | None:intergenic | 45.0% | |
| ACATGTTTCAGCGAATACCC+TGG | - | chr7_3:10728196-10728215 | Msa1092840:intron | 45.0% | |
| AAGAAAGACATCCCAGACCA+GGG | + | chr7_3:10728216-10728235 | None:intergenic | 45.0% | |
| AAAGAAAGACATCCCAGACC+AGG | + | chr7_3:10728217-10728236 | None:intergenic | 45.0% | |
| ACTGTTCTCATTCTTGCAGG+TGG | - | chr7_3:10728363-10728382 | Msa1092840:intron | 45.0% | |
| CATCATTGTATGCACCGTTG+TGG | - | chr7_3:10728408-10728427 | Msa1092840:intron | 45.0% | |
| CTTATGGACACAGCTTGTGA+CGG | + | chr7_3:10728744-10728763 | None:intergenic | 45.0% | |
| GTGAGAGGAAAATGGGAACT+AGG | + | chr7_3:10728806-10728825 | None:intergenic | 45.0% | |
| !! | CTTTAGCACTGACAAGAGGA+TGG | + | chr7_3:10728980-10728999 | None:intergenic | 45.0% |
| !! | GGATCTTTAGCACTGACAAG+AGG | + | chr7_3:10728984-10729003 | None:intergenic | 45.0% |
| TGTCAGTGCTAAAGATCCAG+TGG | - | chr7_3:10728986-10729005 | Msa1092840:CDS | 45.0% | |
| ! | AGATCCAGTGGTATCGAAGT+CGG | - | chr7_3:10728998-10729017 | Msa1092840:CDS | 45.0% |
| AAATCCGACTTCGATACCAC+TGG | + | chr7_3:10729005-10729024 | None:intergenic | 45.0% | |
| !!! | ATTTAATTTGAAAAATTATT+TGG | + | chr7_3:10728456-10728475 | None:intergenic | 5.0% |
| ! | ACAACCGATTCAACCACCCT+CGG | - | chr7_3:10724616-10724635 | Msa1092840:intron | 50.0% |
| CTTTGTGTGGCGATGAAGCA+TGG | - | chr7_3:10724776-10724795 | Msa1092840:CDS | 50.0% | |
| AGCATGGAAGCCATGCCTTA+AGG | - | chr7_3:10724792-10724811 | Msa1092840:CDS | 50.0% | |
| GGGTGAATGTCCTTAAGGCA+TGG | + | chr7_3:10724805-10724824 | None:intergenic | 50.0% | |
| GGGTCCTGTCATGCTTATTG+TGG | - | chr7_3:10724983-10725002 | Msa1092840:intron | 50.0% | |
| GGCACCACAATAAGCATGAC+AGG | + | chr7_3:10724990-10725009 | None:intergenic | 50.0% | |
| TCGGGTTCAGTCCTTGTAGA+TGG | - | chr7_3:10725124-10725143 | Msa1092840:intron | 50.0% | |
| TTCTAGGTGGACCTTCACTC+TGG | - | chr7_3:10725473-10725492 | Msa1092840:intron | 50.0% | |
| !! | GATTGGTTCGATCCAAGGCA+AGG | + | chr7_3:10725542-10725561 | None:intergenic | 50.0% |
| TCCCGAAATGCAATAAGCCC+AGG | + | chr7_3:10725932-10725951 | None:intergenic | 50.0% | |
| TGCAGGAGCAGTCATGCTTA+CGG | - | chr7_3:10726559-10726578 | Msa1092840:intron | 50.0% | |
| !! | ATGCACTGACTGCGTGAATG+CGG | + | chr7_3:10726838-10726857 | None:intergenic | 50.0% |
| CATTCACGCAGTCAGTGCAT+CGG | - | chr7_3:10726838-10726857 | Msa1092840:intron | 50.0% | |
| TCCCTCATCATCCACGCTAT+AGG | - | chr7_3:10727523-10727542 | Msa1092840:intron | 50.0% | |
| GCCTATAGCGTGGATGATGA+GGG | + | chr7_3:10727527-10727546 | None:intergenic | 50.0% | |
| AGCCTATAGCGTGGATGATG+AGG | + | chr7_3:10727528-10727547 | None:intergenic | 50.0% | |
| CATCCACGCTATAGGCTCAT+TGG | - | chr7_3:10727531-10727550 | Msa1092840:intron | 50.0% | |
| !! | TGTGTGCTGGCTGAGTAAGT+AGG | - | chr7_3:10727657-10727676 | Msa1092840:intron | 50.0% |
| GCTGGCTGAGTAAGTAGGTA+AGG | - | chr7_3:10727662-10727681 | Msa1092840:intron | 50.0% | |
| !! | TATAGGTGGCATATCGGCTC+AGG | - | chr7_3:10727816-10727835 | Msa1092840:intron | 50.0% |
| TTTCAGCGAATACCCTGGTC+TGG | - | chr7_3:10728201-10728220 | Msa1092840:intron | 50.0% | |
| TTCAGCGAATACCCTGGTCT+GGG | - | chr7_3:10728202-10728221 | Msa1092840:intron | 50.0% | |
| TTCATGCCTGCGTCTCGATT+TGG | - | chr7_3:10728277-10728296 | Msa1092840:CDS | 50.0% | |
| !! | GAACTGTAGGTACTTGGTGC+TGG | - | chr7_3:10728877-10728896 | Msa1092840:CDS | 50.0% |
| !!! | AGAGTGAGTCGTTTTTGCGC+AGG | + | chr7_3:10729056-10729075 | None:intergenic | 50.0% |
| TGGTCTGCTGCCAGATAATC+AGG | - | chr7_3:10729099-10729118 | Msa1092840:CDS | 50.0% | |
| CTGCTGCCAGATAATCAGGA+TGG | - | chr7_3:10729103-10729122 | Msa1092840:CDS | 50.0% | |
| AAGGGAGGCCTCACTAAAGG+TGG | - | chr7_3:10725163-10725182 | Msa1092840:intron | 55.0% | |
| TTAGTAATCGGCGAAGCCGG+TGG | - | chr7_3:10725209-10725228 | Msa1092840:intron | 55.0% | |
| GATCCAAGGCAAGGCTTCCA+GGG | + | chr7_3:10725533-10725552 | None:intergenic | 55.0% | |
| GTGGCATCCTGGTGTAAGAG+AGG | + | chr7_3:10725816-10725835 | None:intergenic | 55.0% | |
| !! | TGCACTGACTGCGTGAATGC+GGG | + | chr7_3:10726837-10726856 | None:intergenic | 55.0% |
| ! | GTCAGTGCATCGGTGACCTT+TGG | - | chr7_3:10726848-10726867 | Msa1092840:intron | 55.0% |
| TGGTACCAGAGTCTCGTCGT+TGG | - | chr7_3:10727498-10727517 | Msa1092840:intron | 55.0% | |
| GGAATCCAACGACGAGACTC+TGG | + | chr7_3:10727506-10727525 | None:intergenic | 55.0% | |
| GACCCAATGAGCCTATAGCG+TGG | + | chr7_3:10727537-10727556 | None:intergenic | 55.0% | |
| ATGGCAGGGTTGCCACATGA+AGG | + | chr7_3:10727588-10727607 | None:intergenic | 55.0% | |
| CTGAGACAGAGGGCCAAGTT+GGG | + | chr7_3:10727858-10727877 | None:intergenic | 55.0% | |
| ACTGAGACAGAGGGCCAAGT+TGG | + | chr7_3:10727859-10727878 | None:intergenic | 55.0% | |
| GGCAAGGGAGGCCTCACTAA+AGG | - | chr7_3:10725160-10725179 | Msa1092840:intron | 60.0% | |
| TCTCCCTGGAAGCCTTGCCT+TGG | - | chr7_3:10725527-10725546 | Msa1092840:CDS | 60.0% | |
| CGATCCAAGGCAAGGCTTCC+AGG | + | chr7_3:10725534-10725553 | None:intergenic | 60.0% | |
| !! | GCACTGACTGCGTGAATGCG+GGG | + | chr7_3:10726836-10726855 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 10724571 | 10729206 | 10724571 | ID=Msa1092840;Name=Msa1092840 |
| chr7_3 | mRNA | 10724571 | 10729206 | 10724571 | ID=Msa1092840-mRNA-1;Parent=Msa1092840;Name=Msa1092840-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.77|0.8|0.9|0.44|0.5|10|153|356 |
| chr7_3 | exon | 10724571 | 10724625 | 10724571 | ID=Msa1092840-mRNA-1:exon:2823;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10724653 | 10724891 | 10724653 | ID=Msa1092840-mRNA-1:exon:2822;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10725218 | 10725266 | 10725218 | ID=Msa1092840-mRNA-1:exon:2821;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10725348 | 10725395 | 10725348 | ID=Msa1092840-mRNA-1:exon:2820;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10725479 | 10725570 | 10725479 | ID=Msa1092840-mRNA-1:exon:2819;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10725653 | 10725718 | 10725653 | ID=Msa1092840-mRNA-1:exon:2818;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10727134 | 10727223 | 10727134 | ID=Msa1092840-mRNA-1:exon:2817;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10727881 | 10728072 | 10727881 | ID=Msa1092840-mRNA-1:exon:2816;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10728265 | 10728298 | 10728265 | ID=Msa1092840-mRNA-1:exon:2815;Parent=Msa1092840-mRNA-1 |
| chr7_3 | exon | 10728848 | 10729206 | 10728848 | ID=Msa1092840-mRNA-1:exon:2814;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10728848 | 10729206 | 10728848 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10728265 | 10728298 | 10728265 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10727881 | 10728072 | 10727881 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10727134 | 10727223 | 10727134 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10725653 | 10725718 | 10725653 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10725479 | 10725570 | 10725479 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10725348 | 10725395 | 10725348 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10725218 | 10725266 | 10725218 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | CDS | 10724751 | 10724891 | 10724751 | ID=Msa1092840-mRNA-1:cds;Parent=Msa1092840-mRNA-1 |
| chr7_3 | three_prime_UTR | 10724653 | 10724750 | 10724653 | ID=Msa1092840-mRNA-1:three_prime_utr;Parent=Msa1092840-mRNA-1 |
| chr7_3 | three_prime_UTR | 10724571 | 10724625 | 10724571 | ID=Msa1092840-mRNA-1:three_prime_utr;Parent=Msa1092840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
