Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015100 | XP_013448225.1 | 80.833 | 240 | 33 | 3 | 28 | 267 | 29 | 255 | 6.29e-131 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015100 | A0A072TXT8 | 80.833 | 240 | 33 | 3 | 28 | 267 | 29 | 255 | 3.01e-131 | 384 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0080100 | Msa1015100 | 0.827245 | 1.740521e-54 | -8.615850e-47 |
| Msa0644220 | Msa1015100 | 0.841002 | 6.185625e-58 | -8.615850e-47 |
| Msa0684030 | Msa1015100 | 0.820566 | 6.409450e-53 | -8.615850e-47 |
| Msa0745010 | Msa1015100 | 0.801978 | 6.976078e-49 | -8.615850e-47 |
| Msa0766910 | Msa1015100 | 0.805911 | 1.061885e-49 | -8.615850e-47 |
| Msa0766950 | Msa1015100 | 0.810156 | 1.326228e-50 | -8.615850e-47 |
| Msa0151210 | Msa1015100 | 0.815984 | 6.985617e-52 | -8.615850e-47 |
| Msa0211600 | Msa1015100 | 0.818952 | 1.498378e-52 | -8.615850e-47 |
| Msa0213510 | Msa1015100 | 0.842409 | 2.632735e-58 | -8.615850e-47 |
| Msa0422230 | Msa1015100 | 0.824477 | 7.901854e-54 | -8.615850e-47 |
| Msa0457070 | Msa1015100 | 0.808951 | 2.406607e-50 | -8.615850e-47 |
| Msa0998660 | Msa1015100 | 0.806730 | 7.138966e-50 | -8.615850e-47 |
| Msa1015100 | Msa1056660 | 0.924906 | 3.759686e-90 | -8.615850e-47 |
| Msa1015100 | Msa1078210 | 0.803004 | 4.286405e-49 | -8.615850e-47 |
| Msa1015100 | Msa1083660 | 0.801484 | 8.811192e-49 | -8.615850e-47 |
| Msa1015100 | Msa1092840 | 0.804108 | 2.530992e-49 | -8.615850e-47 |
| Msa1015100 | Msa1143060 | 0.824744 | 6.838680e-54 | -8.615850e-47 |
| Msa1015100 | Msa1405040 | 0.821606 | 3.691602e-53 | -8.615850e-47 |
| Msa0292060 | Msa1015100 | 0.801974 | 6.990108e-49 | -8.615850e-47 |
| Msa0330970 | Msa1015100 | 0.845192 | 4.735073e-59 | -8.615850e-47 |
| Msa0343230 | Msa1015100 | 0.825693 | 4.077948e-54 | -8.615850e-47 |
| Msa0355300 | Msa1015100 | 0.806548 | 7.798916e-50 | -8.615850e-47 |
| Msa0363090 | Msa1015100 | 0.831550 | 1.566331e-55 | -8.615850e-47 |
| Msa0483410 | Msa1015100 | 0.802110 | 6.553079e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015100 | MtrunA17_Chr7g0228251 | 80.833 | 240 | 33 | 3 | 28 | 267 | 29 | 255 | 5.79e-135 | 384 |
| Msa1015100 | MtrunA17_Chr4g0058951 | 44.783 | 230 | 105 | 5 | 38 | 255 | 59 | 278 | 5.26e-58 | 189 |
| Msa1015100 | MtrunA17_Chr3g0117481 | 46.018 | 226 | 108 | 4 | 43 | 255 | 56 | 280 | 2.36e-54 | 180 |
| Msa1015100 | MtrunA17_Chr5g0413351 | 42.222 | 225 | 111 | 4 | 44 | 255 | 38 | 256 | 8.41e-51 | 170 |
| Msa1015100 | MtrunA17_Chr8g0368481 | 40.991 | 222 | 120 | 4 | 44 | 255 | 68 | 288 | 1.23e-47 | 162 |
| Msa1015100 | MtrunA17_Chr8g0368491 | 39.819 | 221 | 124 | 3 | 44 | 255 | 53 | 273 | 7.85e-45 | 155 |
| Msa1015100 | MtrunA17_Chr1g0194161 | 38.220 | 191 | 115 | 1 | 68 | 255 | 67 | 257 | 4.92e-37 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015100 | AT5G62960.2 | 47.826 | 207 | 100 | 3 | 55 | 257 | 75 | 277 | 1.67e-58 | 189 |
| Msa1015100 | AT5G62960.1 | 47.317 | 205 | 100 | 2 | 55 | 255 | 75 | 275 | 3.84e-58 | 190 |
| Msa1015100 | AT3G27770.1 | 46.500 | 200 | 101 | 2 | 62 | 255 | 55 | 254 | 1.41e-54 | 179 |
| Msa1015100 | AT1G10660.2 | 48.529 | 204 | 92 | 2 | 63 | 255 | 53 | 254 | 4.00e-54 | 179 |
| Msa1015100 | AT1G10660.1 | 48.529 | 204 | 92 | 2 | 63 | 255 | 53 | 254 | 4.00e-54 | 179 |
| Msa1015100 | AT1G10660.3 | 48.529 | 204 | 92 | 2 | 63 | 255 | 53 | 254 | 4.00e-54 | 179 |
| Msa1015100 | AT1G10660.4 | 48.529 | 204 | 92 | 2 | 63 | 255 | 53 | 254 | 4.00e-54 | 179 |
| Msa1015100 | AT3G27770.2 | 47.090 | 189 | 94 | 2 | 73 | 255 | 23 | 211 | 1.60e-50 | 168 |
| Msa1015100 | AT1G70505.2 | 39.450 | 218 | 109 | 5 | 39 | 243 | 39 | 246 | 9.82e-43 | 147 |
| Msa1015100 | AT1G70505.3 | 37.603 | 242 | 123 | 6 | 39 | 267 | 39 | 265 | 3.22e-41 | 145 |
| Msa1015100 | AT1G70505.4 | 37.603 | 242 | 123 | 6 | 39 | 267 | 65 | 291 | 4.74e-41 | 145 |
| Msa1015100 | AT1G70505.1 | 43.085 | 188 | 88 | 4 | 68 | 242 | 90 | 271 | 3.54e-40 | 143 |
| Msa1015100 | AT2G47115.1 | 35.632 | 174 | 94 | 3 | 56 | 229 | 49 | 204 | 6.03e-23 | 96.3 |
Find 58 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTGGTTACAATTTATTT+TGG | 0.161036 | 7_1:-26315850 | Msa1015100:CDS |
| TGGCTTCTTTATGCTAATTC+TGG | 0.213433 | 7_1:-26312529 | Msa1015100:CDS |
| TATCTCATTCTCTTCTCTTT+TGG | 0.217017 | 7_1:-26316490 | Msa1015100:CDS |
| ATTCAACCACCCTCGGTTAT+TGG | 0.234236 | 7_1:-26316716 | Msa1015100:CDS |
| TGCTTACGGATTGCGTTTAT+TGG | 0.249358 | 7_1:-26314766 | Msa1015100:CDS |
| GCCATGACTGACATGGATTT+TGG | 0.268633 | 7_1:+26316455 | None:intergenic |
| CCCTCGGTTATTGGTTAAAC+TGG | 0.287613 | 7_1:-26316707 | Msa1015100:CDS |
| ACTGTTTAATTGTCGAAATC+TGG | 0.327854 | 7_1:-26312371 | Msa1015100:three_prime_UTR |
| TTAATGCATATTCCATGTTA+TGG | 0.334506 | 7_1:-26312549 | Msa1015100:CDS |
| TCCTTGCATGTCTAACAATA+TGG | 0.334556 | 7_1:-26316644 | Msa1015100:CDS |
| ATGTCAGCATTCTGATTATC+TGG | 0.339364 | 7_1:+26312341 | None:intergenic |
| CACACAAAGTACTGTCTTGC+TGG | 0.374893 | 7_1:+26316577 | None:intergenic |
| GCATCTGTGCTATCAGTGTA+TGG | 0.396063 | 7_1:-26315631 | Msa1015100:CDS |
| TGCAATATTATCATTTAAGA+TGG | 0.402260 | 7_1:+26315579 | None:intergenic |
| CGAAAAGCTAGCAAACAAAC+AGG | 0.409282 | 7_1:+26316516 | None:intergenic |
| AGAATCAAATTGCACCCGTT+TGG | 0.413328 | 7_1:-26315492 | Msa1015100:CDS |
| TTCTATCAGGAGGATGCAAC+TGG | 0.419089 | 7_1:-26316751 | Msa1015100:CDS |
| AGTTTAAATCATAATCTCTC+AGG | 0.419431 | 7_1:+26314720 | None:intergenic |
| CGATGCAGCTTTAAATTGCT+TGG | 0.420651 | 7_1:-26313273 | Msa1015100:intron |
| TGGTGTAAGAGAGGCACATT+TGG | 0.433186 | 7_1:+26315535 | None:intergenic |
| TAATCTCTCAGGGTAAGAAA+TGG | 0.438837 | 7_1:+26314731 | None:intergenic |
| TCTGTATGTCTGTGGCATCC+TGG | 0.446287 | 7_1:+26315515 | None:intergenic |
| AGGACCATAGACAGCAAAAC+AGG | 0.451528 | 7_1:+26316663 | None:intergenic |
| AAACAGGGTGAATGTCCTTA+AGG | 0.462624 | 7_1:+26316532 | None:intergenic |
| AGCATGGAAGCCATGCCTTA+AGG | 0.467672 | 7_1:-26316547 | Msa1015100:CDS |
| TTCTAGGTGGACCTTCACTC+TGG | 0.473579 | 7_1:-26315866 | Msa1015100:intron |
| ATCTTCTTAGAGTGAAATGC+AGG | 0.482682 | 7_1:-26312425 | Msa1015100:three_prime_UTR |
| TGCAGGAGCAGTCATGCTTA+CGG | 0.503796 | 7_1:-26314780 | Msa1015100:CDS |
| ATAACCGAGGGTGGTTGAAT+CGG | 0.515580 | 7_1:+26316719 | None:intergenic |
| GCCAAAATCCATGTCAGTCA+TGG | 0.515953 | 7_1:-26316456 | Msa1015100:CDS |
| AACACTATTTCTTATCAAAG+TGG | 0.531764 | 7_1:-26312500 | Msa1015100:CDS |
| TTGATTCTTCTGTATGTCTG+TGG | 0.544759 | 7_1:+26315507 | None:intergenic |
| AATATTATCATTTAAGATGG+TGG | 0.550164 | 7_1:+26315582 | None:intergenic |
| CGGTTATTGGTTAAACTGGA+GGG | 0.553318 | 7_1:-26316703 | Msa1015100:CDS |
| CTTTAGCACTGACAAGAGGA+TGG | 0.554084 | 7_1:+26312474 | None:intergenic |
| AGATCGAGTGGTATCAAAGT+CGG | 0.569677 | 7_1:-26312453 | Msa1015100:CDS |
| TCGGTTATTGGTTAAACTGG+AGG | 0.575070 | 7_1:-26316704 | Msa1015100:CDS |
| CTTTGTGTGGCGATGAAGCA+TGG | 0.575967 | 7_1:-26316563 | Msa1015100:CDS |
| AGCATAAAGAAGCCATAACA+TGG | 0.583592 | 7_1:+26312537 | None:intergenic |
| CATCTGTGCTATCAGTGTAT+GGG | 0.585564 | 7_1:-26315630 | Msa1015100:CDS |
| TCCATATTGTTAGACATGCA+AGG | 0.594278 | 7_1:+26316643 | None:intergenic |
| ATAAATTGTAACCAGAGTGA+AGG | 0.603687 | 7_1:+26315855 | None:intergenic |
| CGATCTTTAGCACTGACAAG+AGG | 0.605358 | 7_1:+26312470 | None:intergenic |
| AAATGTGCCTCTCTTACACC+AGG | 0.613144 | 7_1:-26315533 | Msa1015100:CDS |
| GTTTAAATCATAATCTCTCA+GGG | 0.614875 | 7_1:+26314721 | None:intergenic |
| AGGAATCTCACATTTGACTA+CGG | 0.615194 | 7_1:-26316606 | Msa1015100:CDS |
| GGGTGAATGTCCTTAAGGCA+TGG | 0.618152 | 7_1:+26316537 | None:intergenic |
| GTGGCATCCTGGTGTAAGAG+AGG | 0.622055 | 7_1:+26315526 | None:intergenic |
| TTTAGCACTGACAAGAGGAT+GGG | 0.635473 | 7_1:+26312475 | None:intergenic |
| TGTCAGTGCTAAAGATCGAG+TGG | 0.643272 | 7_1:-26312465 | Msa1015100:CDS |
| GCAAGAATAGATGCAGAGCA+AGG | 0.644774 | 7_1:-26315559 | Msa1015100:CDS |
| ACAACCGATTCAACCACCCT+CGG | 0.647096 | 7_1:-26316723 | Msa1015100:CDS |
| TCCAGTTTAACCAATAACCG+AGG | 0.651660 | 7_1:+26316706 | None:intergenic |
| CCAGTTTAACCAATAACCGA+GGG | 0.655736 | 7_1:+26316707 | None:intergenic |
| GTTTAACCAATAACCGAGGG+TGG | 0.656189 | 7_1:+26316710 | None:intergenic |
| CAGCAAGACAGTACTTTGTG+TGG | 0.666072 | 7_1:-26316576 | Msa1015100:CDS |
| GAAAAGCTAGCAAACAAACA+GGG | 0.684484 | 7_1:+26316517 | None:intergenic |
| ATATTGTGCCATGACTGACA+TGG | 0.701794 | 7_1:+26316448 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATAAAACAAAAAAATTT+GGG | + | chr7_1:26313899-26313918 | None:intergenic | 10.0% |
| !! | TTTCATAAAACAAAAAAATT+TGG | + | chr7_1:26313900-26313919 | None:intergenic | 10.0% |
| !!! | GTAAATTTATTATTTCTTTA+AGG | - | chr7_1:26314016-26314035 | Msa1015100:intron | 10.0% |
| !! | AATAAAACATATTAAAATCA+AGG | + | chr7_1:26314239-26314258 | None:intergenic | 10.0% |
| !! | TCAAAACAAAAAAAAAAAAT+TGG | + | chr7_1:26316466-26316485 | None:intergenic | 10.0% |
| !! | TTCAAAATTCTAAATAGATT+TGG | + | chr7_1:26313041-26313060 | None:intergenic | 15.0% |
| !! | TACAATTAAATAGAAAAACA+CGG | - | chr7_1:26313624-26313643 | Msa1015100:intron | 15.0% |
| !! | AAAGAAACAAACAAATATAA+GGG | + | chr7_1:26313693-26313712 | None:intergenic | 15.0% |
| !! | TAAAGAAACAAACAAATATA+AGG | + | chr7_1:26313694-26313713 | None:intergenic | 15.0% |
| !!! | TAATTTCTAGAATTTAACAT+CGG | - | chr7_1:26314182-26314201 | Msa1015100:intron | 15.0% |
| !! | TAGATATGTTCAATAAAATT+AGG | - | chr7_1:26314737-26314756 | Msa1015100:CDS | 15.0% |
| !! | TAATTGTATTATGATGATTT+AGG | - | chr7_1:26314866-26314885 | Msa1015100:intron | 15.0% |
| !! | AAAATAAGTATCTATATGTA+AGG | + | chr7_1:26315064-26315083 | None:intergenic | 15.0% |
| !! | ATACTTGTAAAATTTGATAT+TGG | - | chr7_1:26315523-26315542 | Msa1015100:CDS | 15.0% |
| !! | AAATTTATCAACAACTTATA+AGG | - | chr7_1:26315615-26315634 | Msa1015100:CDS | 15.0% |
| !! | AATTGATATATGATATTCTT+TGG | - | chr7_1:26315649-26315668 | Msa1015100:intron | 15.0% |
| !!! | TAGTAGTTATTTTTCTAAGT+TGG | - | chr7_1:26312744-26312763 | Msa1015100:intron | 20.0% |
| !! | GATTCAATTATAATGCTTAA+AGG | + | chr7_1:26313019-26313038 | None:intergenic | 20.0% |
| !! | ATCACAATTTATCAATCAAA+TGG | + | chr7_1:26313147-26313166 | None:intergenic | 20.0% |
| !!! | AATATTATCATTTAAGATGG+TGG | + | chr7_1:26313479-26313498 | None:intergenic | 20.0% |
| !! | TGCAATATTATCATTTAAGA+TGG | + | chr7_1:26313482-26313501 | None:intergenic | 20.0% |
| !!! | CATTTTTCAAATTTTATTCC+AGG | - | chr7_1:26313594-26313613 | Msa1015100:intron | 20.0% |
| !! | ATTTAATTGTAGTTAATACC+TGG | + | chr7_1:26313615-26313634 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAGATAGAAGA+TGG | + | chr7_1:26313736-26313755 | None:intergenic | 20.0% |
| !! | AATCATGTTCAATTATATCT+TGG | + | chr7_1:26313923-26313942 | None:intergenic | 20.0% |
| !!! | ATCTGATTTTTCATTCAAAT+AGG | + | chr7_1:26314106-26314125 | None:intergenic | 20.0% |
| !!! | TCAAGGTTACTAAATTTTAA+AGG | - | chr7_1:26314760-26314779 | Msa1015100:CDS | 20.0% |
| !! | TTTCAAATTATTGATCTTCA+TGG | + | chr7_1:26315092-26315111 | None:intergenic | 20.0% |
| !! | ATGAAGATCAATAATTTGAA+AGG | - | chr7_1:26315091-26315110 | Msa1015100:intron | 20.0% |
| !! | TGAAGATCAATAATTTGAAA+GGG | - | chr7_1:26315092-26315111 | Msa1015100:intron | 20.0% |
| !!! | TATTTTTGCATGTCAAATTT+TGG | - | chr7_1:26315985-26316004 | Msa1015100:intron | 20.0% |
| !!! | TTTTAAATTAAATGATCACG+CGG | - | chr7_1:26316136-26316155 | Msa1015100:intron | 20.0% |
| !! | TGGATATTCTGATTAATATA+TGG | - | chr7_1:26316435-26316454 | Msa1015100:CDS | 20.0% |
| !!! | TTTTTTTTGTTTTGAACTGT+AGG | - | chr7_1:26316471-26316490 | Msa1015100:CDS | 20.0% |
| ! | TTATGAACTCGATTTATTTG+TGG | - | chr7_1:26312681-26312700 | Msa1015100:intron | 25.0% |
| ! | TATGAACTCGATTTATTTGT+GGG | - | chr7_1:26312682-26312701 | Msa1015100:intron | 25.0% |
| ! | GATACTTTAAATCAGTGATA+TGG | - | chr7_1:26312950-26312969 | Msa1015100:intron | 25.0% |
| ! | TGAAACAAATGTCAAAGAAA+TGG | + | chr7_1:26313101-26313120 | None:intergenic | 25.0% |
| !!! | TCTTATTTTGGATTTCTTCT+AGG | - | chr7_1:26313176-26313195 | Msa1015100:intron | 25.0% |
| !! | ACTCTGGTTACAATTTATTT+TGG | - | chr7_1:26313208-26313227 | Msa1015100:intron | 25.0% |
| !!! | CTCTGGTTACAATTTATTTT+GGG | - | chr7_1:26313209-26313228 | Msa1015100:intron | 25.0% |
| !!! | TCTGGTTACAATTTATTTTG+GGG | - | chr7_1:26313210-26313229 | Msa1015100:intron | 25.0% |
| ! | ATGTGATATATGAATAGGAT+TGG | + | chr7_1:26313278-26313297 | None:intergenic | 25.0% |
| ! | GCTAAATGTGATATATGAAT+AGG | + | chr7_1:26313283-26313302 | None:intergenic | 25.0% |
| ! | AAAATACAGTAGTCAGTAAA+AGG | - | chr7_1:26313328-26313347 | Msa1015100:intron | 25.0% |
| ! | TTGAAAAATGTAACTCCAAA+CGG | + | chr7_1:26313584-26313603 | None:intergenic | 25.0% |
| ! | AAAAGACTAAAGATTATGGA+TGG | + | chr7_1:26313859-26313878 | None:intergenic | 25.0% |
| ! | GCTTAAAAGACTAAAGATTA+TGG | + | chr7_1:26313863-26313882 | None:intergenic | 25.0% |
| ! | TCATGCATTAGATGAATTAA+AGG | - | chr7_1:26313974-26313993 | Msa1015100:intron | 25.0% |
| ! | CTTGAACTTTACATACTTTA+TGG | - | chr7_1:26314158-26314177 | Msa1015100:intron | 25.0% |
| ! | GTTTAAATCATAATCTCTCA+GGG | + | chr7_1:26314340-26314359 | None:intergenic | 25.0% |
| ! | AGTTTAAATCATAATCTCTC+AGG | + | chr7_1:26314341-26314360 | None:intergenic | 25.0% |
| ! | ATATACTTAGACTGTTATGA+AGG | - | chr7_1:26314467-26314486 | Msa1015100:intron | 25.0% |
| ! | TAGATATCGATCAATAATCA+CGG | - | chr7_1:26314665-26314684 | Msa1015100:intron | 25.0% |
| ! | TCTACTAGAAGATTTGAATT+TGG | + | chr7_1:26314721-26314740 | None:intergenic | 25.0% |
| ! | TGTTCAATAAAATTAGGTCA+AGG | - | chr7_1:26314743-26314762 | Msa1015100:CDS | 25.0% |
| ! | TACAATTAAACATGAACTCT+TGG | + | chr7_1:26314854-26314873 | None:intergenic | 25.0% |
| ! | ACGTTTATTATTGCATTCTA+AGG | - | chr7_1:26314937-26314956 | Msa1015100:intron | 25.0% |
| ! | TTAACTATCTCAATAACAGA+TGG | + | chr7_1:26315315-26315334 | None:intergenic | 25.0% |
| !! | TTAATTTTCATTCATTCCCA+TGG | - | chr7_1:26315331-26315350 | Msa1015100:intron | 25.0% |
| ! | ATAACTCATCCATGAAAAAT+TGG | + | chr7_1:26315466-26315485 | None:intergenic | 25.0% |
| ! | CTTGTAAAATTTGATATTGG+TGG | - | chr7_1:26315526-26315545 | Msa1015100:CDS | 25.0% |
| !!! | CTAAATTTAGTTTTGCTCTT+CGG | - | chr7_1:26315762-26315781 | Msa1015100:intron | 25.0% |
| ! | TTATTCTGAATGAAGATTTG+AGG | + | chr7_1:26315826-26315845 | None:intergenic | 25.0% |
| ! | CACAATTGGTTAACTAAATA+TGG | - | chr7_1:26316011-26316030 | Msa1015100:intron | 25.0% |
| !! | ATTAAGTTGTTTATGCAAAC+AGG | + | chr7_1:26316231-26316250 | None:intergenic | 25.0% |
| ! | TTAATGCATATTCCATGTTA+TGG | - | chr7_1:26316509-26316528 | Msa1015100:CDS | 25.0% |
| !! | AACACTATTTCTTATCAAAG+TGG | - | chr7_1:26316558-26316577 | Msa1015100:CDS | 25.0% |
| !! | ACTTCAACATATTTTCTCAA+TGG | + | chr7_1:26316761-26316780 | None:intergenic | 25.0% |
| !!! | AATGTTGTTTTTCTATCAGG+AGG | - | chr7_1:26312297-26312316 | Msa1015100:three_prime_UTR | 30.0% |
| ! | TATCTCATTCTCTTCTCTTT+TGG | - | chr7_1:26312568-26312587 | Msa1015100:CDS | 30.0% |
| !! | GATTGTGAACTCTCTTATTT+TGG | - | chr7_1:26313164-26313183 | Msa1015100:intron | 30.0% |
| !! | TATTTTGGATTTCTTCTAGG+TGG | - | chr7_1:26313179-26313198 | Msa1015100:intron | 30.0% |
| ATAAATTGTAACCAGAGTGA+AGG | + | chr7_1:26313206-26313225 | None:intergenic | 30.0% | |
| TGAAAAATGTAACTCCAAAC+GGG | + | chr7_1:26313583-26313602 | None:intergenic | 30.0% | |
| ACAACAAAACCATGATTTGA+AGG | + | chr7_1:26313791-26313810 | None:intergenic | 30.0% | |
| AGAAGTAGCAATTATGCAAA+TGG | + | chr7_1:26313835-26313854 | None:intergenic | 30.0% | |
| GGGATTAATTTATCAAGCTA+TGG | - | chr7_1:26314058-26314077 | Msa1015100:intron | 30.0% | |
| !!! | GTATTTTAACAGATTAGTGC+AGG | - | chr7_1:26314261-26314280 | Msa1015100:intron | 30.0% |
| ATACCAGTAGCTAATCTAAT+AGG | - | chr7_1:26314440-26314459 | Msa1015100:intron | 30.0% | |
| GGTAAGACAATTGATGAATT+TGG | - | chr7_1:26314509-26314528 | Msa1015100:intron | 30.0% | |
| AAAGTTAGCTCAATGAGTTA+GGG | + | chr7_1:26315151-26315170 | None:intergenic | 30.0% | |
| AAAAGTTAGCTCAATGAGTT+AGG | + | chr7_1:26315152-26315171 | None:intergenic | 30.0% | |
| ! | CTAACTTTTGTCATCAAGTT+AGG | - | chr7_1:26315163-26315182 | Msa1015100:intron | 30.0% |
| TTGGAAAATTATCCTTCATG+TGG | - | chr7_1:26315281-26315300 | Msa1015100:intron | 30.0% | |
| ! | ATTTAGAATACTGAGACAGA+GGG | + | chr7_1:26315592-26315611 | None:intergenic | 30.0% |
| ! | AATTTAGAATACTGAGACAG+AGG | + | chr7_1:26315593-26315612 | None:intergenic | 30.0% |
| !!! | GTGTATATGTCATTTTTCAG+TGG | - | chr7_1:26315923-26315942 | Msa1015100:intron | 30.0% |
| ! | TCAAATTTTGGACACACAAT+TGG | - | chr7_1:26315997-26316016 | Msa1015100:intron | 30.0% |
| TCCAATAGTGAGAAGAAAAT+GGG | + | chr7_1:26316419-26316438 | None:intergenic | 30.0% | |
| ATCCAATAGTGAGAAGAAAA+TGG | + | chr7_1:26316420-26316439 | None:intergenic | 30.0% | |
| ACTGTTTAATTGTCGAAATC+TGG | - | chr7_1:26316687-26316706 | Msa1015100:CDS | 30.0% | |
| TCCTTGCATGTCTAACAATA+TGG | - | chr7_1:26312414-26312433 | Msa1015100:three_prime_UTR | 35.0% | |
| TCCATATTGTTAGACATGCA+AGG | + | chr7_1:26312418-26312437 | None:intergenic | 35.0% | |
| ! | TAACAATATGGAAGCGTGAA+AGG | - | chr7_1:26312426-26312445 | Msa1015100:three_prime_UTR | 35.0% |
| AGGAATCTCACATTTGACTA+CGG | - | chr7_1:26312452-26312471 | Msa1015100:CDS | 35.0% | |
| GAAAAGCTAGCAAACAAACA+GGG | + | chr7_1:26312544-26312563 | None:intergenic | 35.0% | |
| !! | TTATTGTGGTGCCATAGATT+TGG | - | chr7_1:26312716-26312735 | Msa1015100:intron | 35.0% |
| ! | CCATGTATTTTCCATCTACA+AGG | + | chr7_1:26312857-26312876 | None:intergenic | 35.0% |
| CCTTGTAGATGGAAAATACA+TGG | - | chr7_1:26312854-26312873 | Msa1015100:intron | 35.0% | |
| GTAGATGGAAAATACATGGT+TGG | - | chr7_1:26312858-26312877 | Msa1015100:intron | 35.0% | |
| !! | CACTGATTTAAAGTATCCAC+CGG | + | chr7_1:26312947-26312966 | None:intergenic | 35.0% |
| GTAGTCAGTAAAAGGTTAAC+AGG | - | chr7_1:26313336-26313355 | Msa1015100:intron | 35.0% | |
| TTGATTCTTCTGTATGTCTG+TGG | + | chr7_1:26313554-26313573 | None:intergenic | 35.0% | |
| TAAATAGAAAAACACGGACC+TGG | - | chr7_1:26313630-26313649 | Msa1015100:intron | 35.0% | |
| AAATAGAAAAACACGGACCT+GGG | - | chr7_1:26313631-26313650 | Msa1015100:intron | 35.0% | |
| TTCTTAGCTCCTTCAAATCA+TGG | - | chr7_1:26313779-26313798 | Msa1015100:intron | 35.0% | |
| ! | TAAGGATCAAAGAGCATAGA+TGG | - | chr7_1:26314034-26314053 | Msa1015100:intron | 35.0% |
| TAATCTCTCAGGGTAAGAAA+TGG | + | chr7_1:26314330-26314349 | None:intergenic | 35.0% | |
| ! | TCACCTATTAGATTAGCTAC+TGG | + | chr7_1:26314446-26314465 | None:intergenic | 35.0% |
| ATCGAGAGTTAGTAAGATAG+TGG | - | chr7_1:26314809-26314828 | Msa1015100:intron | 35.0% | |
| TCGAGAGTTAGTAAGATAGT+GGG | - | chr7_1:26314810-26314829 | Msa1015100:intron | 35.0% | |
| !! | ATATGATCTGCTTTGACTTG+AGG | - | chr7_1:26314985-26315004 | Msa1015100:intron | 35.0% |
| ! | TGACTTGAGGCATTAAAATG+AGG | - | chr7_1:26314998-26315017 | Msa1015100:intron | 35.0% |
| AGGCATTAAAATGAGGTCTT+TGG | - | chr7_1:26315005-26315024 | Msa1015100:intron | 35.0% | |
| GCAAGTCATATATCTTAGTG+TGG | - | chr7_1:26315121-26315140 | Msa1015100:intron | 35.0% | |
| TATCTCAATAACAGATGGCA+GGG | + | chr7_1:26315310-26315329 | None:intergenic | 35.0% | |
| !! | CAATAAAGGTGTTGTACCAT+GGG | + | chr7_1:26315350-26315369 | None:intergenic | 35.0% |
| !! | ACAATAAAGGTGTTGTACCA+TGG | + | chr7_1:26315351-26315370 | None:intergenic | 35.0% |
| TCCAATGTCGTGTATAGATA+TGG | - | chr7_1:26315399-26315418 | Msa1015100:intron | 35.0% | |
| ACCATATCTATACACGACAT+TGG | + | chr7_1:26315403-26315422 | None:intergenic | 35.0% | |
| TCGTGTATAGATATGGTCAT+TGG | - | chr7_1:26315406-26315425 | Msa1015100:intron | 35.0% | |
| ! | TCACCTTCACCAATTTTTCA+TGG | - | chr7_1:26315454-26315473 | Msa1015100:intron | 35.0% |
| CATCCATGAAAAATTGGTGA+AGG | + | chr7_1:26315460-26315479 | None:intergenic | 35.0% | |
| GACAAATCAAGAAATGGGTA+AGG | + | chr7_1:26316062-26316081 | None:intergenic | 35.0% | |
| GGGATGACAAATCAAGAAAT+GGG | + | chr7_1:26316067-26316086 | None:intergenic | 35.0% | |
| AGGGATGACAAATCAAGAAA+TGG | + | chr7_1:26316068-26316087 | None:intergenic | 35.0% | |
| AATGAAACAGCTTACCACAA+TGG | + | chr7_1:26316098-26316117 | None:intergenic | 35.0% | |
| AAAACATGAGTTCTGTATCG+AGG | - | chr7_1:26316189-26316208 | Msa1015100:intron | 35.0% | |
| TATCGAGGAATCTTGGATAA+TGG | - | chr7_1:26316204-26316223 | Msa1015100:intron | 35.0% | |
| ! | AAGCACTTTGAGAGATCTTA+TGG | + | chr7_1:26316366-26316385 | None:intergenic | 35.0% |
| GGATATTGAGTTTCTCTACT+AGG | + | chr7_1:26316391-26316410 | None:intergenic | 35.0% | |
| CCAATAGTGAGAAGAAAATG+GGG | + | chr7_1:26316418-26316437 | None:intergenic | 35.0% | |
| !! | TGTTTTGAACTGTAGGTACT+TGG | - | chr7_1:26316478-26316497 | Msa1015100:CDS | 35.0% |
| AGCATAAAGAAGCCATAACA+TGG | + | chr7_1:26316524-26316543 | None:intergenic | 35.0% | |
| TGGCTTCTTTATGCTAATTC+TGG | - | chr7_1:26316529-26316548 | Msa1015100:CDS | 35.0% | |
| ATCTTCTTAGAGTGAAATGC+AGG | - | chr7_1:26316633-26316652 | Msa1015100:intron | 35.0% | |
| ATGTCAGCATTCTGATTATC+TGG | + | chr7_1:26316720-26316739 | None:intergenic | 35.0% | |
| CCAGTTTAACCAATAACCGA+GGG | + | chr7_1:26312354-26312373 | None:intergenic | 40.0% | |
| TCCAGTTTAACCAATAACCG+AGG | + | chr7_1:26312355-26312374 | None:intergenic | 40.0% | |
| ! | TCGGTTATTGGTTAAACTGG+AGG | - | chr7_1:26312354-26312373 | Msa1015100:three_prime_UTR | 40.0% |
| ! | CGGTTATTGGTTAAACTGGA+GGG | - | chr7_1:26312355-26312374 | Msa1015100:three_prime_UTR | 40.0% |
| !! | AGTTCCTGTTTTGCTGTCTA+TGG | - | chr7_1:26312391-26312410 | Msa1015100:three_prime_UTR | 40.0% |
| AAACAGGGTGAATGTCCTTA+AGG | + | chr7_1:26312529-26312548 | None:intergenic | 40.0% | |
| CGAAAAGCTAGCAAACAAAC+AGG | + | chr7_1:26312545-26312564 | None:intergenic | 40.0% | |
| ATATTGTGCCATGACTGACA+TGG | + | chr7_1:26312613-26312632 | None:intergenic | 40.0% | |
| CTACTAGCTCACCAAATCTA+TGG | + | chr7_1:26312730-26312749 | None:intergenic | 40.0% | |
| CTAGTGAACCAACATTACGT+TGG | - | chr7_1:26312782-26312801 | Msa1015100:intron | 40.0% | |
| GGATCCCTTAATCAAAGTCT+CGG | - | chr7_1:26312824-26312843 | Msa1015100:intron | 40.0% | |
| GATCCCTTAATCAAAGTCTC+GGG | - | chr7_1:26312825-26312844 | Msa1015100:intron | 40.0% | |
| GAACCCGAGACTTTGATTAA+GGG | + | chr7_1:26312831-26312850 | None:intergenic | 40.0% | |
| TGAACCCGAGACTTTGATTA+AGG | + | chr7_1:26312832-26312851 | None:intergenic | 40.0% | |
| TGGAAAATACATGGTTGGCA+AGG | - | chr7_1:26312863-26312882 | Msa1015100:intron | 40.0% | |
| GGAAAATACATGGTTGGCAA+GGG | - | chr7_1:26312864-26312883 | Msa1015100:intron | 40.0% | |
| CTCCGACTGAGATTAGTAAT+CGG | - | chr7_1:26312916-26312935 | Msa1015100:intron | 40.0% | |
| !! | AATAGGATTGGTTCGATCCA+AGG | + | chr7_1:26313266-26313285 | None:intergenic | 40.0% |
| CATCTGTGCTATCAGTGTAT+GGG | - | chr7_1:26313428-26313447 | Msa1015100:intron | 40.0% | |
| AGAATCAAATTGCACCCGTT+TGG | - | chr7_1:26313566-26313585 | Msa1015100:intron | 40.0% | |
| AATAGAAAAACACGGACCTG+GGG | - | chr7_1:26313632-26313651 | Msa1015100:intron | 40.0% | |
| ! | GATCAAAGAGCATAGATGGA+GGG | - | chr7_1:26314038-26314057 | Msa1015100:intron | 40.0% |
| ! | TGCTTACGGATTGCGTTTAT+TGG | - | chr7_1:26314292-26314311 | Msa1015100:intron | 40.0% |
| GTTATGAAGGCTACAACTTG+AGG | - | chr7_1:26314480-26314499 | Msa1015100:intron | 40.0% | |
| GATGGTCATGATTTCAAGCT+TGG | - | chr7_1:26314600-26314619 | Msa1015100:intron | 40.0% | |
| !! | TAGTAAGATAGTGGGTGTTG+TGG | - | chr7_1:26314818-26314837 | Msa1015100:intron | 40.0% |
| CTATCTCAATAACAGATGGC+AGG | + | chr7_1:26315311-26315330 | None:intergenic | 40.0% | |
| GTACAACACCTTTATTGTGC+TGG | - | chr7_1:26315353-26315372 | Msa1015100:intron | 40.0% | |
| TTACTCAGCCAGCACAATAA+AGG | + | chr7_1:26315364-26315383 | None:intergenic | 40.0% | |
| ACAAGGAGGAGAAAAATGAG+GGG | + | chr7_1:26315717-26315736 | None:intergenic | 40.0% | |
| CACAAGGAGGAGAAAAATGA+GGG | + | chr7_1:26315718-26315737 | None:intergenic | 40.0% | |
| ACACAAGGAGGAGAAAAATG+AGG | + | chr7_1:26315719-26315738 | None:intergenic | 40.0% | |
| TGTTCACTGTCATCTACACA+AGG | + | chr7_1:26315734-26315753 | None:intergenic | 40.0% | |
| !! | CGATGCAGCTTTAAATTGCT+TGG | - | chr7_1:26315785-26315804 | Msa1015100:intron | 40.0% |
| AAGAAAGACATCCCATACCA+GGG | + | chr7_1:26315889-26315908 | None:intergenic | 40.0% | |
| GGATGTCTTTCTTCGTGTTA+TGG | - | chr7_1:26315896-26315915 | Msa1015100:intron | 40.0% | |
| TCTTTCTTCGTGTTATGGAC+AGG | - | chr7_1:26315901-26315920 | Msa1015100:intron | 40.0% | |
| GTAACTGTACTCAATCTGAC+AGG | - | chr7_1:26316033-26316052 | Msa1015100:intron | 40.0% | |
| TTACCACAATGGTGCATACA+GGG | + | chr7_1:26316087-26316106 | None:intergenic | 40.0% | |
| AGTTCTGTATCGAGGAATCT+TGG | - | chr7_1:26316197-26316216 | Msa1015100:intron | 40.0% | |
| ! | CCCCATTTTCTTCTCACTAT+TGG | - | chr7_1:26316415-26316434 | Msa1015100:intron | 40.0% |
| !! | TTTAGCACTGACAAGAGGAT+GGG | + | chr7_1:26316586-26316605 | None:intergenic | 40.0% |
| AGATCGAGTGGTATCAAAGT+CGG | - | chr7_1:26316605-26316624 | Msa1015100:CDS | 40.0% | |
| TTCTATCAGGAGGATGCAAC+TGG | - | chr7_1:26312307-26312326 | Msa1015100:three_prime_UTR | 45.0% | |
| ATAACCGAGGGTGGTTGAAT+CGG | + | chr7_1:26312342-26312361 | None:intergenic | 45.0% | |
| ATTCAACCACCCTCGGTTAT+TGG | - | chr7_1:26312342-26312361 | Msa1015100:three_prime_UTR | 45.0% | |
| GTTTAACCAATAACCGAGGG+TGG | + | chr7_1:26312351-26312370 | None:intergenic | 45.0% | |
| ! | CCCTCGGTTATTGGTTAAAC+TGG | - | chr7_1:26312351-26312370 | Msa1015100:three_prime_UTR | 45.0% |
| AGGACCATAGACAGCAAAAC+AGG | + | chr7_1:26312398-26312417 | None:intergenic | 45.0% | |
| ! | TATGGAAGCGTGAAAGGTCA+AGG | - | chr7_1:26312432-26312451 | Msa1015100:exon | 45.0% |
| !! | CACACAAAGTACTGTCTTGC+TGG | + | chr7_1:26312484-26312503 | None:intergenic | 45.0% |
| CAGCAAGACAGTACTTTGTG+TGG | - | chr7_1:26312482-26312501 | Msa1015100:CDS | 45.0% | |
| GCCAAAATCCATGTCAGTCA+TGG | - | chr7_1:26312602-26312621 | Msa1015100:intron | 45.0% | |
| ! | GCCATGACTGACATGGATTT+TGG | + | chr7_1:26312606-26312625 | None:intergenic | 45.0% |
| GGGTCCTGTCATACTTATTG+TGG | - | chr7_1:26312702-26312721 | Msa1015100:intron | 45.0% | |
| GGCACCACAATAAGTATGAC+AGG | + | chr7_1:26312709-26312728 | None:intergenic | 45.0% | |
| CACTCTGACCAACGTAATGT+TGG | + | chr7_1:26312793-26312812 | None:intergenic | 45.0% | |
| CAACATTACGTTGGTCAGAG+TGG | - | chr7_1:26312791-26312810 | Msa1015100:intron | 45.0% | |
| GGTCAGAGTGGAACTAAACT+TGG | - | chr7_1:26312803-26312822 | Msa1015100:intron | 45.0% | |
| AAATACATGGTTGGCAAGGG+AGG | - | chr7_1:26312867-26312886 | Msa1015100:intron | 45.0% | |
| TATACTGGCCACCTTTAGTG+AGG | + | chr7_1:26312893-26312912 | None:intergenic | 45.0% | |
| TCTCAGTCGGAGAACTATAC+TGG | + | chr7_1:26312908-26312927 | None:intergenic | 45.0% | |
| ! | CGCCGATTACTAATCTCAGT+CGG | + | chr7_1:26312921-26312940 | None:intergenic | 45.0% |
| AGATTAGTAATCGGCGAAGC+CGG | - | chr7_1:26312925-26312944 | Msa1015100:intron | 45.0% | |
| GTATGTCTCTTGATTCTCCC+TGG | - | chr7_1:26313232-26313251 | Msa1015100:intron | 45.0% | |
| GCATCTGTGCTATCAGTGTA+TGG | - | chr7_1:26313427-26313446 | Msa1015100:intron | 45.0% | |
| GCAAGAATAGATGCAGAGCA+AGG | - | chr7_1:26313499-26313518 | Msa1015100:intron | 45.0% | |
| ! | TGGTGTAAGAGAGGCACATT+TGG | + | chr7_1:26313526-26313545 | None:intergenic | 45.0% |
| AAATGTGCCTCTCTTACACC+AGG | - | chr7_1:26313525-26313544 | Msa1015100:intron | 45.0% | |
| ACCTGGGGCTTATTGCATTT+CGG | - | chr7_1:26313647-26313666 | Msa1015100:intron | 45.0% | |
| ! | GGATCAAAGAGCATAGATGG+AGG | - | chr7_1:26314037-26314056 | Msa1015100:intron | 45.0% |
| ! | GGTGCATGAAGACTGTGTTT+TGG | - | chr7_1:26314079-26314098 | Msa1015100:intron | 45.0% |
| GGCTACAACTTGAGGCTAAA+TGG | - | chr7_1:26314488-26314507 | Msa1015100:intron | 45.0% | |
| TGAATGCGGGGAATTTGTGA+TGG | + | chr7_1:26314543-26314562 | None:intergenic | 45.0% | |
| GGTGACCTTTGGATCAAGAT+CGG | - | chr7_1:26314578-26314597 | Msa1015100:intron | 45.0% | |
| ACCTTTGGATCAAGATCGGA+TGG | - | chr7_1:26314582-26314601 | Msa1015100:intron | 45.0% | |
| ACCATCCGATCTTGATCCAA+AGG | + | chr7_1:26314586-26314605 | None:intergenic | 45.0% | |
| TAGTACCAGAGTCTCGTTGT+TGG | - | chr7_1:26315206-26315225 | Msa1015100:intron | 45.0% | |
| GTCAAAGCGTGAGAAACTGT+TGG | - | chr7_1:26315262-26315281 | Msa1015100:intron | 45.0% | |
| !! | ATTGTGCTGGCTGAGTAAGT+AGG | - | chr7_1:26315366-26315385 | Msa1015100:intron | 45.0% |
| ! | TGGTCATTGGAGTGCTTAGA+AGG | - | chr7_1:26315419-26315438 | Msa1015100:intron | 45.0% |
| ! | TTGGAGTGCTTAGAAGGCTT+AGG | - | chr7_1:26315425-26315444 | Msa1015100:intron | 45.0% |
| ! | TATTGGTGGCATATCGTCTC+AGG | - | chr7_1:26315540-26315559 | Msa1015100:CDS | 45.0% |
| CAAGGAGGAGAAAAATGAGG+GGG | + | chr7_1:26315716-26315735 | None:intergenic | 45.0% | |
| TCACTGTCATCTACACAAGG+AGG | + | chr7_1:26315731-26315750 | None:intergenic | 45.0% | |
| GGGTATTCGCTGAAACATGT+AGG | + | chr7_1:26315869-26315888 | None:intergenic | 45.0% | |
| ACATGTTTCAGCGAATACCC+TGG | - | chr7_1:26315869-26315888 | Msa1015100:intron | 45.0% | |
| TTTCAGCGAATACCCTGGTA+TGG | - | chr7_1:26315874-26315893 | Msa1015100:intron | 45.0% | |
| TTCAGCGAATACCCTGGTAT+GGG | - | chr7_1:26315875-26315894 | Msa1015100:intron | 45.0% | |
| GAAGAAAGACATCCCATACC+AGG | + | chr7_1:26315890-26315909 | None:intergenic | 45.0% | |
| TTCATGCTTGCGTCTCGATT+TGG | - | chr7_1:26315950-26315969 | Msa1015100:intron | 45.0% | |
| ACTGTACTCAATCTGACAGG+TGG | - | chr7_1:26316036-26316055 | Msa1015100:intron | 45.0% | |
| CTTACCACAATGGTGCATAC+AGG | + | chr7_1:26316088-26316107 | None:intergenic | 45.0% | |
| GTGAGAAGAAAATGGGGACA+AGG | + | chr7_1:26316412-26316431 | None:intergenic | 45.0% | |
| !! | CTTTAGCACTGACAAGAGGA+TGG | + | chr7_1:26316587-26316606 | None:intergenic | 45.0% |
| !! | CGATCTTTAGCACTGACAAG+AGG | + | chr7_1:26316591-26316610 | None:intergenic | 45.0% |
| TGTCAGTGCTAAAGATCGAG+TGG | - | chr7_1:26316593-26316612 | Msa1015100:CDS | 45.0% | |
| !!! | AGAGTGAGTCGTTTTTGCAC+AGG | + | chr7_1:26316663-26316682 | None:intergenic | 45.0% |
| ! | ACAACCGATTCAACCACCCT+CGG | - | chr7_1:26312335-26312354 | Msa1015100:three_prime_UTR | 50.0% |
| CTTTGTGTGGCGATGAAGCA+TGG | - | chr7_1:26312495-26312514 | Msa1015100:CDS | 50.0% | |
| AGCATGGAAGCCATGCCTTA+AGG | - | chr7_1:26312511-26312530 | Msa1015100:CDS | 50.0% | |
| GGGTGAATGTCCTTAAGGCA+TGG | + | chr7_1:26312524-26312543 | None:intergenic | 50.0% | |
| TCGGGTTCAGTCCTTGTAGA+TGG | - | chr7_1:26312843-26312862 | Msa1015100:intron | 50.0% | |
| TTCTAGGTGGACCTTCACTC+TGG | - | chr7_1:26313192-26313211 | Msa1015100:intron | 50.0% | |
| !! | GATTGGTTCGATCCAAGGCA+AGG | + | chr7_1:26313261-26313280 | None:intergenic | 50.0% |
| TCTGTATGTCTGTGGCATCC+TGG | + | chr7_1:26313546-26313565 | None:intergenic | 50.0% | |
| CCTGGGGCTTATTGCATTTC+GGG | - | chr7_1:26313648-26313667 | Msa1015100:intron | 50.0% | |
| TGCAGGAGCAGTCATGCTTA+CGG | - | chr7_1:26314278-26314297 | Msa1015100:intron | 50.0% | |
| !! | ATGCACTGACTGCGTGAATG+CGG | + | chr7_1:26314557-26314576 | None:intergenic | 50.0% |
| CATTCACGCAGTCAGTGCAT+CGG | - | chr7_1:26314557-26314576 | Msa1015100:intron | 50.0% | |
| GCTGGCTGAGTAAGTAGGTA+AGG | - | chr7_1:26315371-26315390 | Msa1015100:intron | 50.0% | |
| GAGTGCTTAGAAGGCTTAGG+CGG | - | chr7_1:26315428-26315447 | Msa1015100:intron | 50.0% | |
| CTGAGACAGAGGGTCATGTT+GGG | + | chr7_1:26315582-26315601 | None:intergenic | 50.0% | |
| ACTGAGACAGAGGGTCATGT+TGG | + | chr7_1:26315583-26315602 | None:intergenic | 50.0% | |
| CATCCCTGTATGCACCATTG+TGG | - | chr7_1:26316081-26316100 | Msa1015100:intron | 50.0% | |
| AAGGGAGGCCTCACTAAAGG+TGG | - | chr7_1:26312882-26312901 | Msa1015100:intron | 55.0% | |
| TTAGTAATCGGCGAAGCCGG+TGG | - | chr7_1:26312928-26312947 | Msa1015100:intron | 55.0% | |
| GATCCAAGGCAAGGCTTCCA+GGG | + | chr7_1:26313252-26313271 | None:intergenic | 55.0% | |
| GTGGCATCCTGGTGTAAGAG+AGG | + | chr7_1:26313535-26313554 | None:intergenic | 55.0% | |
| CCCGAAATGCAATAAGCCCC+AGG | + | chr7_1:26313651-26313670 | None:intergenic | 55.0% | |
| !! | TGCACTGACTGCGTGAATGC+GGG | + | chr7_1:26314556-26314575 | None:intergenic | 55.0% |
| ! | GTCAGTGCATCGGTGACCTT+TGG | - | chr7_1:26314567-26314586 | Msa1015100:intron | 55.0% |
| GGAAGCCAACAACGAGACTC+TGG | + | chr7_1:26315214-26315233 | None:intergenic | 55.0% | |
| ATGGCAGGGTTGCCACATGA+AGG | + | chr7_1:26315296-26315315 | None:intergenic | 55.0% | |
| GGCAAGGGAGGCCTCACTAA+AGG | - | chr7_1:26312879-26312898 | Msa1015100:intron | 60.0% | |
| TCTCCCTGGAAGCCTTGCCT+TGG | - | chr7_1:26313246-26313265 | Msa1015100:intron | 60.0% | |
| CGATCCAAGGCAAGGCTTCC+AGG | + | chr7_1:26313253-26313272 | None:intergenic | 60.0% | |
| !! | GCACTGACTGCGTGAATGCG+GGG | + | chr7_1:26314555-26314574 | None:intergenic | 60.0% |
| CGATGAGCCTAGAGCGTGGA+CGG | + | chr7_1:26315241-26315260 | None:intergenic | 60.0% | |
| ! | CGTCCACGCTCTAGGCTCAT+CGG | - | chr7_1:26315239-26315258 | Msa1015100:intron | 60.0% |
| ! | GTCCACGCTCTAGGCTCATC+GGG | - | chr7_1:26315240-26315259 | Msa1015100:intron | 60.0% |
| TCCCTCACCGTCCACGCTCT+AGG | - | chr7_1:26315231-26315250 | Msa1015100:intron | 65.0% | |
| GCCTAGAGCGTGGACGGTGA+GGG | + | chr7_1:26315235-26315254 | None:intergenic | 65.0% | |
| AGCCTAGAGCGTGGACGGTG+AGG | + | chr7_1:26315236-26315255 | None:intergenic | 65.0% | |
| GACCCGATGAGCCTAGAGCG+TGG | + | chr7_1:26315245-26315264 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 26312296 | 26316784 | 26312296 | ID=Msa1015100;Name=Msa1015100 |
| chr7_1 | mRNA | 26312296 | 26316784 | 26312296 | ID=Msa1015100-mRNA-1;Parent=Msa1015100;Name=Msa1015100-mRNA-1;_AED=0.21;_eAED=0.21;_QI=2|0.66|0.71|1|0.16|0.28|7|151|288 |
| chr7_1 | exon | 26312296 | 26312587 | 26312296 | ID=Msa1015100-mRNA-1:exon:5755;Parent=Msa1015100-mRNA-1 |
| chr7_1 | exon | 26313274 | 26313339 | 26313274 | ID=Msa1015100-mRNA-1:exon:5754;Parent=Msa1015100-mRNA-1 |
| chr7_1 | exon | 26314718 | 26314807 | 26314718 | ID=Msa1015100-mRNA-1:exon:5753;Parent=Msa1015100-mRNA-1 |
| chr7_1 | exon | 26315465 | 26315656 | 26315465 | ID=Msa1015100-mRNA-1:exon:5752;Parent=Msa1015100-mRNA-1 |
| chr7_1 | exon | 26315849 | 26315882 | 26315849 | ID=Msa1015100-mRNA-1:exon:5751;Parent=Msa1015100-mRNA-1 |
| chr7_1 | exon | 26316432 | 26316632 | 26316432 | ID=Msa1015100-mRNA-1:exon:5750;Parent=Msa1015100-mRNA-1 |
| chr7_1 | exon | 26316640 | 26316784 | 26316640 | ID=Msa1015100-mRNA-1:exon:5749;Parent=Msa1015100-mRNA-1 |
| chr7_1 | five_prime_UTR | 26316783 | 26316784 | 26316783 | ID=Msa1015100-mRNA-1:five_prime_utr;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26316640 | 26316782 | 26316640 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26316432 | 26316632 | 26316432 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26315849 | 26315882 | 26315849 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26315465 | 26315656 | 26315465 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26314718 | 26314807 | 26314718 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26313274 | 26313339 | 26313274 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | CDS | 26312447 | 26312587 | 26312447 | ID=Msa1015100-mRNA-1:cds;Parent=Msa1015100-mRNA-1 |
| chr7_1 | three_prime_UTR | 26312296 | 26312446 | 26312296 | ID=Msa1015100-mRNA-1:three_prime_utr;Parent=Msa1015100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
