Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056660 | XP_013448225.1 | 76.349 | 241 | 27 | 3 | 28 | 245 | 22 | 255 | 1.35e-119 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056660 | A0A072TXT8 | 76.349 | 241 | 27 | 3 | 28 | 245 | 22 | 255 | 6.47e-120 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038750 | Msa1056660 | 0.806743 | 7.090893e-50 | -8.615850e-47 |
| Msa0042210 | Msa1056660 | 0.803646 | 3.156698e-49 | -8.615850e-47 |
| Msa0046050 | Msa1056660 | 0.818373 | 2.027992e-52 | -8.615850e-47 |
| Msa0075830 | Msa1056660 | 0.815852 | 7.475160e-52 | -8.615850e-47 |
| Msa0079100 | Msa1056660 | 0.805305 | 1.423259e-49 | -8.615850e-47 |
| Msa0080100 | Msa1056660 | 0.835478 | 1.638953e-56 | -8.615850e-47 |
| Msa0086620 | Msa1056660 | 0.810752 | 9.860827e-51 | -8.615850e-47 |
| Msa0105140 | Msa1056660 | 0.804565 | 2.032245e-49 | -8.615850e-47 |
| Msa0603180 | Msa1056660 | 0.813396 | 2.614546e-51 | -8.615850e-47 |
| Msa0644220 | Msa1056660 | 0.851806 | 6.982266e-61 | -8.615850e-47 |
| Msa0684030 | Msa1056660 | 0.833822 | 4.276199e-56 | -8.615850e-47 |
| Msa0707120 | Msa1056660 | 0.814485 | 1.504523e-51 | -8.615850e-47 |
| Msa0708360 | Msa1056660 | 0.808602 | 2.856709e-50 | -8.615850e-47 |
| Msa0745010 | Msa1056660 | 0.826660 | 2.401701e-54 | -8.615850e-47 |
| Msa0750200 | Msa1056660 | 0.802793 | 4.738738e-49 | -8.615850e-47 |
| Msa0766910 | Msa1056660 | 0.815092 | 1.103547e-51 | -8.615850e-47 |
| Msa0766950 | Msa1056660 | 0.805623 | 1.220783e-49 | -8.615850e-47 |
| Msa0792180 | Msa1056660 | 0.814790 | 1.287517e-51 | -8.615850e-47 |
| Msa0122170 | Msa1056660 | 0.805955 | 1.039405e-49 | -8.615850e-47 |
| Msa0142390 | Msa1056660 | 0.800468 | 1.420766e-48 | -8.615850e-47 |
| Msa0185540 | Msa1056660 | 0.807896 | 4.041081e-50 | -8.615850e-47 |
| Msa0211600 | Msa1056660 | 0.812432 | 4.252106e-51 | -8.615850e-47 |
| Msa0213510 | Msa1056660 | 0.819440 | 1.160303e-52 | -8.615850e-47 |
| Msa0213590 | Msa1056660 | 0.813401 | 2.607872e-51 | -8.615850e-47 |
| Msa0425810 | Msa1056660 | 0.817638 | 2.972822e-52 | -8.615850e-47 |
| Msa0430040 | Msa1056660 | 0.813050 | 3.114254e-51 | -8.615850e-47 |
| Msa0437790 | Msa1056660 | 0.815759 | 7.842122e-52 | -8.615850e-47 |
| Msa0439940 | Msa1056660 | 0.806531 | 7.862185e-50 | -8.615850e-47 |
| Msa0440720 | Msa1056660 | 0.819799 | 9.608561e-53 | -8.615850e-47 |
| Msa0472570 | Msa1056660 | 0.822623 | 2.145021e-53 | -8.615850e-47 |
| Msa0479890 | Msa1056660 | 0.823899 | 1.080106e-53 | -8.615850e-47 |
| Msa1015100 | Msa1056660 | 0.924906 | 3.759686e-90 | -8.615850e-47 |
| Msa1056660 | Msa1083660 | 0.806050 | 9.928027e-50 | -8.615850e-47 |
| Msa1056660 | Msa1092840 | 0.864346 | 1.299276e-64 | -8.615850e-47 |
| Msa1056660 | Msa1223540 | -0.805231 | 1.474827e-49 | -8.615850e-47 |
| Msa1056660 | Msa1257860 | 0.807742 | 4.355782e-50 | -8.615850e-47 |
| Msa1056660 | Msa1269730 | 0.815702 | 8.073751e-52 | -8.615850e-47 |
| Msa1056660 | Msa1331530 | 0.803016 | 4.263278e-49 | -8.615850e-47 |
| Msa1056660 | Msa1355540 | -0.811692 | 6.165598e-51 | -8.615850e-47 |
| Msa1056660 | Msa1373390 | 0.808365 | 3.209355e-50 | -8.615850e-47 |
| Msa1056660 | Msa1381060 | 0.821458 | 3.995435e-53 | -8.615850e-47 |
| Msa1056660 | Msa1405040 | 0.835984 | 1.220650e-56 | -8.615850e-47 |
| Msa1056660 | Msa1411830 | 0.808027 | 3.790006e-50 | -8.615850e-47 |
| Msa0238960 | Msa1056660 | 0.806630 | 7.493806e-50 | -8.615850e-47 |
| Msa0264710 | Msa1056660 | -0.815651 | 8.288415e-52 | -8.615850e-47 |
| Msa0269370 | Msa1056660 | 0.815727 | 7.970414e-52 | -8.615850e-47 |
| Msa0274690 | Msa1056660 | 0.804719 | 1.887480e-49 | -8.615850e-47 |
| Msa0292060 | Msa1056660 | 0.804632 | 1.967943e-49 | -8.615850e-47 |
| Msa0292860 | Msa1056660 | 0.802631 | 5.118304e-49 | -8.615850e-47 |
| Msa0302750 | Msa1056660 | -0.812539 | 4.029172e-51 | -8.615850e-47 |
| Msa0316720 | Msa1056660 | 0.811613 | 6.414254e-51 | -8.615850e-47 |
| Msa0330970 | Msa1056660 | 0.822670 | 2.092189e-53 | -8.615850e-47 |
| Msa0337610 | Msa1056660 | 0.800565 | 1.358125e-48 | -8.615850e-47 |
| Msa0355300 | Msa1056660 | 0.803638 | 3.169206e-49 | -8.615850e-47 |
| Msa0363090 | Msa1056660 | 0.820588 | 6.337109e-53 | -8.615850e-47 |
| Msa0483410 | Msa1056660 | 0.803076 | 4.142000e-49 | -8.615850e-47 |
| Msa0484590 | Msa1056660 | 0.816217 | 6.196252e-52 | -8.615850e-47 |
| Msa0505010 | Msa1056660 | 0.803090 | 4.115364e-49 | -8.615850e-47 |
| Msa0514630 | Msa1056660 | 0.804306 | 2.301101e-49 | -8.615850e-47 |
| Msa0523600 | Msa1056660 | 0.824778 | 6.711689e-54 | -8.615850e-47 |
| Msa0525180 | Msa1056660 | 0.810714 | 1.004876e-50 | -8.615850e-47 |
| Msa0548260 | Msa1056660 | 0.815196 | 1.046631e-51 | -8.615850e-47 |
| Msa0572930 | Msa1056660 | 0.801635 | 8.202884e-49 | -8.615850e-47 |
| Msa0928060 | Msa1056660 | 0.809701 | 1.661373e-50 | -8.615850e-47 |
| Msa0964400 | Msa1056660 | 0.800178 | 1.627903e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056660 | MtrunA17_Chr7g0228251 | 76.349 | 241 | 27 | 3 | 28 | 245 | 22 | 255 | 1.25e-123 | 355 |
| Msa1056660 | MtrunA17_Chr3g0117481 | 40.329 | 243 | 103 | 7 | 33 | 233 | 38 | 280 | 1.93e-45 | 155 |
| Msa1056660 | MtrunA17_Chr4g0058951 | 36.585 | 246 | 112 | 7 | 28 | 233 | 37 | 278 | 8.78e-39 | 138 |
| Msa1056660 | MtrunA17_Chr5g0413351 | 35.043 | 234 | 119 | 5 | 33 | 233 | 23 | 256 | 2.74e-36 | 131 |
| Msa1056660 | MtrunA17_Chr8g0368481 | 34.177 | 237 | 119 | 6 | 33 | 233 | 53 | 288 | 8.86e-35 | 128 |
| Msa1056660 | MtrunA17_Chr8g0368491 | 33.613 | 238 | 123 | 5 | 31 | 233 | 36 | 273 | 3.80e-32 | 120 |
| Msa1056660 | MtrunA17_Chr1g0194161 | 30.366 | 191 | 107 | 2 | 69 | 233 | 67 | 257 | 3.89e-21 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056660 | AT5G62960.2 | 39.171 | 217 | 101 | 4 | 46 | 235 | 65 | 277 | 1.88e-42 | 147 |
| Msa1056660 | AT5G62960.1 | 39.171 | 217 | 101 | 4 | 46 | 235 | 65 | 277 | 3.92e-42 | 147 |
| Msa1056660 | AT3G27770.1 | 38.261 | 230 | 111 | 5 | 33 | 233 | 27 | 254 | 2.90e-41 | 144 |
| Msa1056660 | AT1G10660.2 | 38.750 | 240 | 110 | 4 | 28 | 233 | 18 | 254 | 1.68e-39 | 140 |
| Msa1056660 | AT1G10660.1 | 38.750 | 240 | 110 | 4 | 28 | 233 | 18 | 254 | 1.68e-39 | 140 |
| Msa1056660 | AT1G10660.3 | 38.750 | 240 | 110 | 4 | 28 | 233 | 18 | 254 | 1.68e-39 | 140 |
| Msa1056660 | AT1G10660.4 | 38.750 | 240 | 110 | 4 | 28 | 233 | 18 | 254 | 1.68e-39 | 140 |
| Msa1056660 | AT3G27770.2 | 38.265 | 196 | 92 | 3 | 67 | 233 | 16 | 211 | 1.87e-34 | 125 |
| Msa1056660 | AT1G70505.2 | 32.301 | 226 | 114 | 6 | 33 | 221 | 23 | 246 | 3.31e-28 | 108 |
| Msa1056660 | AT1G70505.3 | 31.200 | 250 | 128 | 7 | 33 | 245 | 23 | 265 | 3.85e-27 | 107 |
| Msa1056660 | AT1G70505.4 | 31.200 | 250 | 128 | 7 | 33 | 245 | 49 | 291 | 6.45e-27 | 107 |
| Msa1056660 | AT1G70505.1 | 32.000 | 225 | 114 | 6 | 33 | 220 | 49 | 271 | 1.46e-25 | 103 |
Find 54 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTCTTTATGCTAATTC+TGG | 0.213433 | 7_2:-34927823 | Msa1056660:CDS |
| TATCTCATTCTCTTCTCTTT+TGG | 0.217017 | 7_2:-34931773 | Msa1056660:CDS |
| ATTCAACCACCCTCGGTTAT+TGG | 0.234236 | 7_2:-34931999 | Msa1056660:CDS |
| TGCTTACGGATTGCGTTTAT+TGG | 0.249358 | 7_2:-34930049 | Msa1056660:CDS |
| GCCATGACTGACATGGATTT+TGG | 0.268633 | 7_2:+34931738 | None:intergenic |
| CCCTCGGTTATTGGTTAAAC+TGG | 0.287613 | 7_2:-34931990 | Msa1056660:CDS |
| ACTGTTTAATTGTCGAAATC+TGG | 0.327854 | 7_2:-34927665 | Msa1056660:three_prime_UTR |
| TTAATGCATATTCCATGTTA+TGG | 0.334506 | 7_2:-34927843 | Msa1056660:CDS |
| TCCTTGCATGTCTAACAATA+TGG | 0.334556 | 7_2:-34931927 | Msa1056660:CDS |
| ATGTCAGCATTCTGATTATC+TGG | 0.339364 | 7_2:+34927635 | None:intergenic |
| CACACAAAGTACTGTCTTGC+TGG | 0.374893 | 7_2:+34931860 | None:intergenic |
| GCATCTGTGCTATCAGTGTA+TGG | 0.396063 | 7_2:-34930914 | Msa1056660:CDS |
| TGCAATATTATCATTTAAGA+TGG | 0.402260 | 7_2:+34930862 | None:intergenic |
| CGAAAAGCTAGCAAACAAAC+AGG | 0.409282 | 7_2:+34931799 | None:intergenic |
| AGAATCAAATTGCACCCGTT+TGG | 0.413328 | 7_2:-34930775 | Msa1056660:CDS |
| TTCTATCAGGAGGATGCAAC+TGG | 0.419089 | 7_2:-34932034 | Msa1056660:CDS |
| AGTTTAAATCATAATCTCTC+AGG | 0.419431 | 7_2:+34930003 | None:intergenic |
| CGATGCAGCTTTAAATTGCT+TGG | 0.420651 | 7_2:-34928568 | Msa1056660:intron |
| TGGTGTAAGAGAGGCACATT+TGG | 0.433186 | 7_2:+34930818 | None:intergenic |
| TAATCTCTCAGGGTAAGAAA+TGG | 0.438837 | 7_2:+34930014 | None:intergenic |
| TCTGTATGTCTGTGGCATCC+TGG | 0.446287 | 7_2:+34930798 | None:intergenic |
| AGGACCATAGACAGCAAAAC+AGG | 0.451528 | 7_2:+34931946 | None:intergenic |
| AAACAGGGTGAATGTCCTTA+AGG | 0.462624 | 7_2:+34931815 | None:intergenic |
| AGCATGGAAGCCATGCCTTA+AGG | 0.467672 | 7_2:-34931830 | Msa1056660:CDS |
| TATGGAAGCGTGAAAGTTCA+AGG | 0.480910 | 7_2:-34931909 | Msa1056660:CDS |
| ATCTTCTTAGAGTGAAATGC+AGG | 0.482682 | 7_2:-34927719 | Msa1056660:three_prime_UTR |
| TGCAGGAGCAGTCATGCTTA+CGG | 0.503796 | 7_2:-34930063 | Msa1056660:CDS |
| ATAACCGAGGGTGGTTGAAT+CGG | 0.515580 | 7_2:+34932002 | None:intergenic |
| AACACTATTTCTTATCAAAG+TGG | 0.531764 | 7_2:-34927794 | Msa1056660:CDS |
| TTGATTCTTCTGTATGTCTG+TGG | 0.544759 | 7_2:+34930790 | None:intergenic |
| AATATTATCATTTAAGATGG+TGG | 0.550164 | 7_2:+34930865 | None:intergenic |
| CGGTTATTGGTTAAACTGGA+GGG | 0.553318 | 7_2:-34931986 | Msa1056660:CDS |
| CTTTAGCACTGACAAGAGGA+TGG | 0.554084 | 7_2:+34927768 | None:intergenic |
| AGATCGAGTGGTATCAAAGT+CGG | 0.569677 | 7_2:-34927747 | Msa1056660:CDS |
| TCGGTTATTGGTTAAACTGG+AGG | 0.575070 | 7_2:-34931987 | Msa1056660:CDS |
| AGGAATCTCACATTTGACTA+CGG | 0.575644 | 7_2:-34931889 | Msa1056660:CDS |
| CTTTGTGTGGCGATGAAGCA+TGG | 0.575967 | 7_2:-34931846 | Msa1056660:CDS |
| AGCATAAAGAAGCCATAACA+TGG | 0.583592 | 7_2:+34927831 | None:intergenic |
| CATCTGTGCTATCAGTGTAT+GGG | 0.585564 | 7_2:-34930913 | Msa1056660:CDS |
| TCCATATTGTTAGACATGCA+AGG | 0.594278 | 7_2:+34931926 | None:intergenic |
| CGATCTTTAGCACTGACAAG+AGG | 0.605358 | 7_2:+34927764 | None:intergenic |
| AAATGTGCCTCTCTTACACC+AGG | 0.613144 | 7_2:-34930816 | Msa1056660:CDS |
| GTTTAAATCATAATCTCTCA+GGG | 0.614875 | 7_2:+34930004 | None:intergenic |
| GGGTGAATGTCCTTAAGGCA+TGG | 0.618152 | 7_2:+34931820 | None:intergenic |
| GTGGCATCCTGGTGTAAGAG+AGG | 0.622055 | 7_2:+34930809 | None:intergenic |
| TTTAGCACTGACAAGAGGAT+GGG | 0.635473 | 7_2:+34927769 | None:intergenic |
| TGTCAGTGCTAAAGATCGAG+TGG | 0.643272 | 7_2:-34927759 | Msa1056660:CDS |
| GCAAGAATAGATGCAGAGCA+AGG | 0.644774 | 7_2:-34930842 | Msa1056660:CDS |
| ACAACCGATTCAACCACCCT+CGG | 0.647096 | 7_2:-34932006 | Msa1056660:CDS |
| TCCAGTTTAACCAATAACCG+AGG | 0.651660 | 7_2:+34931989 | None:intergenic |
| CCAGTTTAACCAATAACCGA+GGG | 0.655736 | 7_2:+34931990 | None:intergenic |
| GTTTAACCAATAACCGAGGG+TGG | 0.656189 | 7_2:+34931993 | None:intergenic |
| CAGCAAGACAGTACTTTGTG+TGG | 0.666072 | 7_2:-34931859 | Msa1056660:CDS |
| GAAAAGCTAGCAAACAAACA+GGG | 0.684484 | 7_2:+34931800 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATAAAACAAAAAAATTT+GGG | + | chr7_2:34929193-34929212 | None:intergenic | 10.0% |
| !! | TTTCATAAAACAAAAAAATT+TGG | + | chr7_2:34929194-34929213 | None:intergenic | 10.0% |
| !!! | GTAAATTTATTATTTCTTTA+AGG | - | chr7_2:34929310-34929329 | Msa1056660:intron | 10.0% |
| !! | AATAAAACATATTAAAATCA+AGG | + | chr7_2:34929533-34929552 | None:intergenic | 10.0% |
| !! | CAAAACAAAAAAAAAAAAAT+TGG | + | chr7_2:34931748-34931767 | None:intergenic | 10.0% |
| !! | TTCAAAATTCTAAATAGATT+TGG | + | chr7_2:34928335-34928354 | None:intergenic | 15.0% |
| !! | TACAATTAAATAGAAAAACA+CGG | - | chr7_2:34928918-34928937 | Msa1056660:intron | 15.0% |
| !! | AAAGAAACAAACAAATATAA+GGG | + | chr7_2:34928987-34929006 | None:intergenic | 15.0% |
| !! | TAAAGAAACAAACAAATATA+AGG | + | chr7_2:34928988-34929007 | None:intergenic | 15.0% |
| !!! | TAATTTCTAGAATTTAACAT+CGG | - | chr7_2:34929476-34929495 | Msa1056660:intron | 15.0% |
| !! | TAGATATGTTCAATAAAATT+AGG | - | chr7_2:34930031-34930050 | Msa1056660:CDS | 15.0% |
| !! | TAATTGTATTATGATGATTT+AGG | - | chr7_2:34930160-34930179 | Msa1056660:intron | 15.0% |
| !! | AAAATAAGTATCTATATGTA+AGG | + | chr7_2:34930358-34930377 | None:intergenic | 15.0% |
| !! | ATACTTGTAAAATTTGATAT+TGG | - | chr7_2:34930805-34930824 | Msa1056660:CDS | 15.0% |
| !! | AAATTTATCAACAACTTATA+AGG | - | chr7_2:34930897-34930916 | Msa1056660:CDS | 15.0% |
| !! | AATTGATATATGATATTCTT+TGG | - | chr7_2:34930931-34930950 | Msa1056660:intron | 15.0% |
| !!! | TAGTAGTTATTTTTCTAAGT+TGG | - | chr7_2:34928038-34928057 | Msa1056660:intron | 20.0% |
| !! | GATTCAATTATAATGCTTAA+AGG | + | chr7_2:34928313-34928332 | None:intergenic | 20.0% |
| !! | ATCACAATTTATCAATCAAA+TGG | + | chr7_2:34928441-34928460 | None:intergenic | 20.0% |
| !!! | AATATTATCATTTAAGATGG+TGG | + | chr7_2:34928773-34928792 | None:intergenic | 20.0% |
| !! | TGCAATATTATCATTTAAGA+TGG | + | chr7_2:34928776-34928795 | None:intergenic | 20.0% |
| !!! | CATTTTTCAAATTTTATTCC+AGG | - | chr7_2:34928888-34928907 | Msa1056660:intron | 20.0% |
| !! | ATTTAATTGTAGTTAATACC+TGG | + | chr7_2:34928909-34928928 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAGATAGAAGA+TGG | + | chr7_2:34929030-34929049 | None:intergenic | 20.0% |
| !! | AATCATGTTCAATTATATCT+TGG | + | chr7_2:34929217-34929236 | None:intergenic | 20.0% |
| !!! | ATCTGATTTTTCATTCAAAT+AGG | + | chr7_2:34929400-34929419 | None:intergenic | 20.0% |
| !!! | TCAAGGTTACTAAATTTTAA+AGG | - | chr7_2:34930054-34930073 | Msa1056660:CDS | 20.0% |
| !! | TTTCAAATTATTGATCTTCA+TGG | + | chr7_2:34930386-34930405 | None:intergenic | 20.0% |
| !! | ATGAAGATCAATAATTTGAA+AGG | - | chr7_2:34930385-34930404 | Msa1056660:intron | 20.0% |
| !! | TGAAGATCAATAATTTGAAA+GGG | - | chr7_2:34930386-34930405 | Msa1056660:intron | 20.0% |
| !!! | TATTTTTGCATGTCAAATTT+TGG | - | chr7_2:34931267-34931286 | Msa1056660:intron | 20.0% |
| !!! | TTTTAAATTAAATGATCACG+CGG | - | chr7_2:34931418-34931437 | Msa1056660:intron | 20.0% |
| !! | TGGATATTCTGATTAATATA+TGG | - | chr7_2:34931717-34931736 | Msa1056660:intron | 20.0% |
| !!! | TTTTTTTTGTTTTGAACTGT+AGG | - | chr7_2:34931754-34931773 | Msa1056660:CDS | 20.0% |
| ! | TTATGAACTCGATTTATTTG+TGG | - | chr7_2:34927975-34927994 | Msa1056660:intron | 25.0% |
| ! | TATGAACTCGATTTATTTGT+GGG | - | chr7_2:34927976-34927995 | Msa1056660:intron | 25.0% |
| ! | GATACTTTAAATCAGTGATA+TGG | - | chr7_2:34928244-34928263 | Msa1056660:intron | 25.0% |
| ! | TGAAACAAATGTCAAAGAAA+TGG | + | chr7_2:34928395-34928414 | None:intergenic | 25.0% |
| !! | TGACATTTGTTTCAAACTTT+TGG | - | chr7_2:34928401-34928420 | Msa1056660:intron | 25.0% |
| !!! | TCTTATTTTGGATTTCTTCT+AGG | - | chr7_2:34928470-34928489 | Msa1056660:intron | 25.0% |
| ! | ATGTGATATATGAATAGGAT+TGG | + | chr7_2:34928572-34928591 | None:intergenic | 25.0% |
| ! | GCTAAATGTGATATATGAAT+AGG | + | chr7_2:34928577-34928596 | None:intergenic | 25.0% |
| ! | AAAATACAGTAGTCAGTAAA+AGG | - | chr7_2:34928622-34928641 | Msa1056660:intron | 25.0% |
| ! | TTGAAAAATGTAACTCCAAA+CGG | + | chr7_2:34928878-34928897 | None:intergenic | 25.0% |
| ! | AAAAGACTAAAGATTATGGA+TGG | + | chr7_2:34929153-34929172 | None:intergenic | 25.0% |
| ! | GCTTAAAAGACTAAAGATTA+TGG | + | chr7_2:34929157-34929176 | None:intergenic | 25.0% |
| ! | TCATGCATTAGATGAATTAA+AGG | - | chr7_2:34929268-34929287 | Msa1056660:intron | 25.0% |
| ! | CTTGAACTTTACATACTTTA+TGG | - | chr7_2:34929452-34929471 | Msa1056660:intron | 25.0% |
| ! | GTTTAAATCATAATCTCTCA+GGG | + | chr7_2:34929634-34929653 | None:intergenic | 25.0% |
| ! | AGTTTAAATCATAATCTCTC+AGG | + | chr7_2:34929635-34929654 | None:intergenic | 25.0% |
| ! | ATATACTTAGACTGTTATGA+AGG | - | chr7_2:34929761-34929780 | Msa1056660:intron | 25.0% |
| ! | TAGATATCGATCAATAATCA+CGG | - | chr7_2:34929959-34929978 | Msa1056660:intron | 25.0% |
| ! | TCTACTAGAAGATTTGAATT+TGG | + | chr7_2:34930015-34930034 | None:intergenic | 25.0% |
| ! | TGTTCAATAAAATTAGGTCA+AGG | - | chr7_2:34930037-34930056 | Msa1056660:CDS | 25.0% |
| ! | TACAATTAAACATGAACTCT+TGG | + | chr7_2:34930148-34930167 | None:intergenic | 25.0% |
| ! | ACGTTTATTATTGCATTCTA+AGG | - | chr7_2:34930231-34930250 | Msa1056660:intron | 25.0% |
| ! | ACTATCTTAGAATTTGAATC+TGG | + | chr7_2:34930472-34930491 | None:intergenic | 25.0% |
| ! | TTAACTATCTCAATAACAGA+TGG | + | chr7_2:34930597-34930616 | None:intergenic | 25.0% |
| !! | TTAATTTTCATTCATTCCCA+TGG | - | chr7_2:34930613-34930632 | Msa1056660:intron | 25.0% |
| ! | ATAACTCATCCATGAAAAAT+TGG | + | chr7_2:34930748-34930767 | None:intergenic | 25.0% |
| ! | CTTGTAAAATTTGATATTGG+TGG | - | chr7_2:34930808-34930827 | Msa1056660:CDS | 25.0% |
| !!! | CTAAATTTAGTTTTGCTCTT+CGG | - | chr7_2:34931044-34931063 | Msa1056660:intron | 25.0% |
| ! | TTATTCTGAATGAAGATTTG+AGG | + | chr7_2:34931108-34931127 | None:intergenic | 25.0% |
| ! | CACAATTGGTTAACTAAATA+TGG | - | chr7_2:34931293-34931312 | Msa1056660:intron | 25.0% |
| !! | ATTAAGTTGTTTATGCAAAC+AGG | + | chr7_2:34931513-34931532 | None:intergenic | 25.0% |
| ! | TTAATGCATATTCCATGTTA+TGG | - | chr7_2:34931792-34931811 | Msa1056660:CDS | 25.0% |
| !! | AACACTATTTCTTATCAAAG+TGG | - | chr7_2:34931841-34931860 | Msa1056660:CDS | 25.0% |
| !! | ACTTCAACATATTTTCTCAA+TGG | + | chr7_2:34932044-34932063 | None:intergenic | 25.0% |
| !!! | AATGTTGTTTTTCTATCAGG+AGG | - | chr7_2:34927591-34927610 | Msa1056660:three_prime_UTR | 30.0% |
| ! | TATCTCATTCTCTTCTCTTT+TGG | - | chr7_2:34927862-34927881 | Msa1056660:CDS | 30.0% |
| !! | GATTGTGAACTCTCTTATTT+TGG | - | chr7_2:34928458-34928477 | Msa1056660:intron | 30.0% |
| !! | TATTTTGGATTTCTTCTAGG+TGG | - | chr7_2:34928473-34928492 | Msa1056660:intron | 30.0% |
| ! | ACTCTGGTTACAGTTTATTT+TGG | - | chr7_2:34928502-34928521 | Msa1056660:intron | 30.0% |
| !! | CTCTGGTTACAGTTTATTTT+GGG | - | chr7_2:34928503-34928522 | Msa1056660:intron | 30.0% |
| !!! | TCTGGTTACAGTTTATTTTG+GGG | - | chr7_2:34928504-34928523 | Msa1056660:intron | 30.0% |
| TGAAAAATGTAACTCCAAAC+GGG | + | chr7_2:34928877-34928896 | None:intergenic | 30.0% | |
| ACAACAAAACCATGATTTGA+AGG | + | chr7_2:34929085-34929104 | None:intergenic | 30.0% | |
| AGAAGTAGCAATTATGCAAA+TGG | + | chr7_2:34929129-34929148 | None:intergenic | 30.0% | |
| GGGATTAATTTATCAAGCTA+TGG | - | chr7_2:34929352-34929371 | Msa1056660:intron | 30.0% | |
| !!! | GTATTTTAACAGATTAGTGC+AGG | - | chr7_2:34929555-34929574 | Msa1056660:intron | 30.0% |
| ATACCAGTAGCTAATCTAAT+AGG | - | chr7_2:34929734-34929753 | Msa1056660:intron | 30.0% | |
| GGTAAGACAATTGATGAATT+TGG | - | chr7_2:34929803-34929822 | Msa1056660:intron | 30.0% | |
| TCTTAGAATTTGAATCTGGA+CGG | + | chr7_2:34930468-34930487 | None:intergenic | 30.0% | |
| TTGGAAAATTATCCTTCATG+TGG | - | chr7_2:34930563-34930582 | Msa1056660:intron | 30.0% | |
| ! | ATTTAGAATACTGAGACAGA+GGG | + | chr7_2:34930874-34930893 | None:intergenic | 30.0% |
| ! | AATTTAGAATACTGAGACAG+AGG | + | chr7_2:34930875-34930894 | None:intergenic | 30.0% |
| !!! | GTGTATATGTCATTTTTCAG+TGG | - | chr7_2:34931205-34931224 | Msa1056660:intron | 30.0% |
| ! | TCAAATTTTGGACACACAAT+TGG | - | chr7_2:34931279-34931298 | Msa1056660:intron | 30.0% |
| TCCAATAGTGAGAAGAAAAT+GGG | + | chr7_2:34931701-34931720 | None:intergenic | 30.0% | |
| ATCCAATAGTGAGAAGAAAA+TGG | + | chr7_2:34931702-34931721 | None:intergenic | 30.0% | |
| ACTGTTTAATTGTCGAAATC+TGG | - | chr7_2:34931970-34931989 | Msa1056660:intron | 30.0% | |
| TCCTTGCATGTCTAACAATA+TGG | - | chr7_2:34927708-34927727 | Msa1056660:three_prime_UTR | 35.0% | |
| TCCATATTGTTAGACATGCA+AGG | + | chr7_2:34927712-34927731 | None:intergenic | 35.0% | |
| AGGAATCTCACATTTGACTA+CGG | - | chr7_2:34927746-34927765 | Msa1056660:CDS | 35.0% | |
| GAAAAGCTAGCAAACAAACA+GGG | + | chr7_2:34927838-34927857 | None:intergenic | 35.0% | |
| !! | TTATTGTGGTGCCATAGATT+TGG | - | chr7_2:34928010-34928029 | Msa1056660:intron | 35.0% |
| ! | CCATGTATTTTCCATCTACA+AGG | + | chr7_2:34928151-34928170 | None:intergenic | 35.0% |
| CCTTGTAGATGGAAAATACA+TGG | - | chr7_2:34928148-34928167 | Msa1056660:intron | 35.0% | |
| GTAGATGGAAAATACATGGT+TGG | - | chr7_2:34928152-34928171 | Msa1056660:intron | 35.0% | |
| !! | CACTGATTTAAAGTATCCAC+CGG | + | chr7_2:34928241-34928260 | None:intergenic | 35.0% |
| ATAAACTGTAACCAGAGTGA+AGG | + | chr7_2:34928500-34928519 | None:intergenic | 35.0% | |
| GTAGTCAGTAAAAGGTTAAC+AGG | - | chr7_2:34928630-34928649 | Msa1056660:intron | 35.0% | |
| TTGATTCTTCTGTATGTCTG+TGG | + | chr7_2:34928848-34928867 | None:intergenic | 35.0% | |
| TAAATAGAAAAACACGGACC+TGG | - | chr7_2:34928924-34928943 | Msa1056660:intron | 35.0% | |
| AAATAGAAAAACACGGACCT+GGG | - | chr7_2:34928925-34928944 | Msa1056660:intron | 35.0% | |
| TTCTTAGCTCCTTCAAATCA+TGG | - | chr7_2:34929073-34929092 | Msa1056660:intron | 35.0% | |
| ! | TAAGGATCAAAGAGCATAGA+TGG | - | chr7_2:34929328-34929347 | Msa1056660:intron | 35.0% |
| TAATCTCTCAGGGTAAGAAA+TGG | + | chr7_2:34929624-34929643 | None:intergenic | 35.0% | |
| ! | TCACCTATTAGATTAGCTAC+TGG | + | chr7_2:34929740-34929759 | None:intergenic | 35.0% |
| ATCGAGAGTTAGTAAGATAG+TGG | - | chr7_2:34930103-34930122 | Msa1056660:intron | 35.0% | |
| TCGAGAGTTAGTAAGATAGT+GGG | - | chr7_2:34930104-34930123 | Msa1056660:intron | 35.0% | |
| !! | ATATGATCTGCTTTGACTTG+AGG | - | chr7_2:34930279-34930298 | Msa1056660:intron | 35.0% |
| ! | TGACTTGAGGCATTAAAATG+AGG | - | chr7_2:34930292-34930311 | Msa1056660:intron | 35.0% |
| AGGCATTAAAATGAGGTCTT+TGG | - | chr7_2:34930299-34930318 | Msa1056660:intron | 35.0% | |
| GCAAGTCATATATCTTAGTG+TGG | - | chr7_2:34930415-34930434 | Msa1056660:intron | 35.0% | |
| TGAGTTAGCTCAATGAGTTA+GGG | + | chr7_2:34930445-34930464 | None:intergenic | 35.0% | |
| TATCTCAATAACAGATGGCA+GGG | + | chr7_2:34930592-34930611 | None:intergenic | 35.0% | |
| !! | CAATAAAGGTGTTGTACCAT+GGG | + | chr7_2:34930632-34930651 | None:intergenic | 35.0% |
| !! | ACAATAAAGGTGTTGTACCA+TGG | + | chr7_2:34930633-34930652 | None:intergenic | 35.0% |
| TCCAATGTCGTGTATAGATA+TGG | - | chr7_2:34930681-34930700 | Msa1056660:intron | 35.0% | |
| ACCATATCTATACACGACAT+TGG | + | chr7_2:34930685-34930704 | None:intergenic | 35.0% | |
| TCGTGTATAGATATGGTCAT+TGG | - | chr7_2:34930688-34930707 | Msa1056660:intron | 35.0% | |
| ! | TCACCTTCACCAATTTTTCA+TGG | - | chr7_2:34930736-34930755 | Msa1056660:intron | 35.0% |
| CATCCATGAAAAATTGGTGA+AGG | + | chr7_2:34930742-34930761 | None:intergenic | 35.0% | |
| GACAAATCAAGAAATGGGTA+AGG | + | chr7_2:34931344-34931363 | None:intergenic | 35.0% | |
| GGGATGACAAATCAAGAAAT+GGG | + | chr7_2:34931349-34931368 | None:intergenic | 35.0% | |
| AGGGATGACAAATCAAGAAA+TGG | + | chr7_2:34931350-34931369 | None:intergenic | 35.0% | |
| AATGAAACAGCTTACCACAA+TGG | + | chr7_2:34931380-34931399 | None:intergenic | 35.0% | |
| AAAACATGAGTTCTGTATCG+AGG | - | chr7_2:34931471-34931490 | Msa1056660:intron | 35.0% | |
| TATCGAGGAATCTTGGATAA+TGG | - | chr7_2:34931486-34931505 | Msa1056660:intron | 35.0% | |
| ! | AAGCACTTTGAGAGATCTTA+TGG | + | chr7_2:34931648-34931667 | None:intergenic | 35.0% |
| GGATATTGAGTTTCTCTACT+AGG | + | chr7_2:34931673-34931692 | None:intergenic | 35.0% | |
| CCAATAGTGAGAAGAAAATG+GGG | + | chr7_2:34931700-34931719 | None:intergenic | 35.0% | |
| !! | TGTTTTGAACTGTAGGTACT+TGG | - | chr7_2:34931761-34931780 | Msa1056660:CDS | 35.0% |
| AGCATAAAGAAGCCATAACA+TGG | + | chr7_2:34931807-34931826 | None:intergenic | 35.0% | |
| TGGCTTCTTTATGCTAATTC+TGG | - | chr7_2:34931812-34931831 | Msa1056660:CDS | 35.0% | |
| ATCTTCTTAGAGTGAAATGC+AGG | - | chr7_2:34931916-34931935 | Msa1056660:CDS | 35.0% | |
| ATGTCAGCATTCTGATTATC+TGG | + | chr7_2:34932003-34932022 | None:intergenic | 35.0% | |
| CCAGTTTAACCAATAACCGA+GGG | + | chr7_2:34927648-34927667 | None:intergenic | 40.0% | |
| TCCAGTTTAACCAATAACCG+AGG | + | chr7_2:34927649-34927668 | None:intergenic | 40.0% | |
| ! | TCGGTTATTGGTTAAACTGG+AGG | - | chr7_2:34927648-34927667 | Msa1056660:three_prime_UTR | 40.0% |
| ! | CGGTTATTGGTTAAACTGGA+GGG | - | chr7_2:34927649-34927668 | Msa1056660:three_prime_UTR | 40.0% |
| !! | AGTTCCTGTTTTGCTGTCTA+TGG | - | chr7_2:34927685-34927704 | Msa1056660:three_prime_UTR | 40.0% |
| ! | TATGGAAGCGTGAAAGTTCA+AGG | - | chr7_2:34927726-34927745 | Msa1056660:exon | 40.0% |
| AAACAGGGTGAATGTCCTTA+AGG | + | chr7_2:34927823-34927842 | None:intergenic | 40.0% | |
| CGAAAAGCTAGCAAACAAAC+AGG | + | chr7_2:34927839-34927858 | None:intergenic | 40.0% | |
| ATATTGTGCCATGACTGACA+TGG | + | chr7_2:34927907-34927926 | None:intergenic | 40.0% | |
| CTACTAGCTCACCAAATCTA+TGG | + | chr7_2:34928024-34928043 | None:intergenic | 40.0% | |
| CTAGTGAACCAACATTACGT+TGG | - | chr7_2:34928076-34928095 | Msa1056660:intron | 40.0% | |
| GGATCCCTTAATCAAAGTCT+CGG | - | chr7_2:34928118-34928137 | Msa1056660:intron | 40.0% | |
| GATCCCTTAATCAAAGTCTC+GGG | - | chr7_2:34928119-34928138 | Msa1056660:intron | 40.0% | |
| GAACCCGAGACTTTGATTAA+GGG | + | chr7_2:34928125-34928144 | None:intergenic | 40.0% | |
| TGAACCCGAGACTTTGATTA+AGG | + | chr7_2:34928126-34928145 | None:intergenic | 40.0% | |
| TGGAAAATACATGGTTGGCA+AGG | - | chr7_2:34928157-34928176 | Msa1056660:intron | 40.0% | |
| GGAAAATACATGGTTGGCAA+GGG | - | chr7_2:34928158-34928177 | Msa1056660:intron | 40.0% | |
| CTCCGACTGAGATTAGTAAT+CGG | - | chr7_2:34928210-34928229 | Msa1056660:intron | 40.0% | |
| ! | AATAGGATTGGTACGATCCA+AGG | + | chr7_2:34928560-34928579 | None:intergenic | 40.0% |
| CATCTGTGCTATCAGTGTAT+GGG | - | chr7_2:34928722-34928741 | Msa1056660:intron | 40.0% | |
| AGAATCAAATTGCACCCGTT+TGG | - | chr7_2:34928860-34928879 | Msa1056660:intron | 40.0% | |
| AATAGAAAAACACGGACCTG+GGG | - | chr7_2:34928926-34928945 | Msa1056660:intron | 40.0% | |
| ! | GATCAAAGAGCATAGATGGA+GGG | - | chr7_2:34929332-34929351 | Msa1056660:intron | 40.0% |
| ! | TGCTTACGGATTGCGTTTAT+TGG | - | chr7_2:34929586-34929605 | Msa1056660:intron | 40.0% |
| GTTATGAAGGCTACAACTTG+AGG | - | chr7_2:34929774-34929793 | Msa1056660:intron | 40.0% | |
| GATGGTCATGATTTCAAGCT+TGG | - | chr7_2:34929894-34929913 | Msa1056660:intron | 40.0% | |
| !! | TAGTAAGATAGTGGGTGTTG+TGG | - | chr7_2:34930112-34930131 | Msa1056660:intron | 40.0% |
| GTGAGTTAGCTCAATGAGTT+AGG | + | chr7_2:34930446-34930465 | None:intergenic | 40.0% | |
| GTCAAAGTGTGAGAAACTGT+TGG | - | chr7_2:34930544-34930563 | Msa1056660:intron | 40.0% | |
| CTATCTCAATAACAGATGGC+AGG | + | chr7_2:34930593-34930612 | None:intergenic | 40.0% | |
| GTACAACACCTTTATTGTGC+TGG | - | chr7_2:34930635-34930654 | Msa1056660:intron | 40.0% | |
| TTACTCAGCCAGCACAATAA+AGG | + | chr7_2:34930646-34930665 | None:intergenic | 40.0% | |
| ACAAGGAGGAGAAAAATGAG+GGG | + | chr7_2:34930999-34931018 | None:intergenic | 40.0% | |
| CACAAGGAGGAGAAAAATGA+GGG | + | chr7_2:34931000-34931019 | None:intergenic | 40.0% | |
| ACACAAGGAGGAGAAAAATG+AGG | + | chr7_2:34931001-34931020 | None:intergenic | 40.0% | |
| TGTTCACTGTCATCTACACA+AGG | + | chr7_2:34931016-34931035 | None:intergenic | 40.0% | |
| !! | CGATGCAGCTTTAAATTGCT+TGG | - | chr7_2:34931067-34931086 | Msa1056660:intron | 40.0% |
| AAGAAAGACATCCCATACCA+GGG | + | chr7_2:34931171-34931190 | None:intergenic | 40.0% | |
| GGATGTCTTTCTTCGTGTTA+TGG | - | chr7_2:34931178-34931197 | Msa1056660:intron | 40.0% | |
| TCTTTCTTCGTGTTATGGAC+AGG | - | chr7_2:34931183-34931202 | Msa1056660:intron | 40.0% | |
| GTAACTGTACTCAATCTGAC+AGG | - | chr7_2:34931315-34931334 | Msa1056660:intron | 40.0% | |
| TTACCACAATGGTGCATACA+GGG | + | chr7_2:34931369-34931388 | None:intergenic | 40.0% | |
| AGTTCTGTATCGAGGAATCT+TGG | - | chr7_2:34931479-34931498 | Msa1056660:intron | 40.0% | |
| ! | CCCCATTTTCTTCTCACTAT+TGG | - | chr7_2:34931697-34931716 | Msa1056660:intron | 40.0% |
| !! | TTTAGCACTGACAAGAGGAT+GGG | + | chr7_2:34931869-34931888 | None:intergenic | 40.0% |
| AGATCGAGTGGTATCAAAGT+CGG | - | chr7_2:34931888-34931907 | Msa1056660:CDS | 40.0% | |
| TTCTATCAGGAGGATGCAAC+TGG | - | chr7_2:34927601-34927620 | Msa1056660:three_prime_UTR | 45.0% | |
| ATAACCGAGGGTGGTTGAAT+CGG | + | chr7_2:34927636-34927655 | None:intergenic | 45.0% | |
| ATTCAACCACCCTCGGTTAT+TGG | - | chr7_2:34927636-34927655 | Msa1056660:three_prime_UTR | 45.0% | |
| GTTTAACCAATAACCGAGGG+TGG | + | chr7_2:34927645-34927664 | None:intergenic | 45.0% | |
| ! | CCCTCGGTTATTGGTTAAAC+TGG | - | chr7_2:34927645-34927664 | Msa1056660:three_prime_UTR | 45.0% |
| AGGACCATAGACAGCAAAAC+AGG | + | chr7_2:34927692-34927711 | None:intergenic | 45.0% | |
| !! | CACACAAAGTACTGTCTTGC+TGG | + | chr7_2:34927778-34927797 | None:intergenic | 45.0% |
| CAGCAAGACAGTACTTTGTG+TGG | - | chr7_2:34927776-34927795 | Msa1056660:CDS | 45.0% | |
| GCCAAAATCCATGTCAGTCA+TGG | - | chr7_2:34927896-34927915 | Msa1056660:intron | 45.0% | |
| ! | GCCATGACTGACATGGATTT+TGG | + | chr7_2:34927900-34927919 | None:intergenic | 45.0% |
| CACTCTGACCAACGTAATGT+TGG | + | chr7_2:34928087-34928106 | None:intergenic | 45.0% | |
| CAACATTACGTTGGTCAGAG+TGG | - | chr7_2:34928085-34928104 | Msa1056660:intron | 45.0% | |
| GGTCAGAGTGGAACTAAACT+TGG | - | chr7_2:34928097-34928116 | Msa1056660:intron | 45.0% | |
| AAATACATGGTTGGCAAGGG+AGG | - | chr7_2:34928161-34928180 | Msa1056660:intron | 45.0% | |
| TATACTGGCCACCTTTAGTG+AGG | + | chr7_2:34928187-34928206 | None:intergenic | 45.0% | |
| TCTCAGTCGGAGAACTATAC+TGG | + | chr7_2:34928202-34928221 | None:intergenic | 45.0% | |
| ! | CGCCGATTACTAATCTCAGT+CGG | + | chr7_2:34928215-34928234 | None:intergenic | 45.0% |
| AGATTAGTAATCGGCGAAGC+CGG | - | chr7_2:34928219-34928238 | Msa1056660:intron | 45.0% | |
| GTATGACTCTTGATTCTCCC+TGG | - | chr7_2:34928526-34928545 | Msa1056660:intron | 45.0% | |
| GCATCTGTGCTATCAGTGTA+TGG | - | chr7_2:34928721-34928740 | Msa1056660:intron | 45.0% | |
| GCAAGAATAGATGCAGAGCA+AGG | - | chr7_2:34928793-34928812 | Msa1056660:intron | 45.0% | |
| ! | TGGTGTAAGAGAGGCACATT+TGG | + | chr7_2:34928820-34928839 | None:intergenic | 45.0% |
| AAATGTGCCTCTCTTACACC+AGG | - | chr7_2:34928819-34928838 | Msa1056660:intron | 45.0% | |
| ACCTGGGGCTTATTGCATTT+CGG | - | chr7_2:34928941-34928960 | Msa1056660:intron | 45.0% | |
| ! | GGATCAAAGAGCATAGATGG+AGG | - | chr7_2:34929331-34929350 | Msa1056660:intron | 45.0% |
| ! | GGTGCATGAAGACTGTGTTT+TGG | - | chr7_2:34929373-34929392 | Msa1056660:intron | 45.0% |
| GGCTACAACTTGAGGCTAAA+TGG | - | chr7_2:34929782-34929801 | Msa1056660:intron | 45.0% | |
| TGAATGCGGGGAATTTGTGA+TGG | + | chr7_2:34929837-34929856 | None:intergenic | 45.0% | |
| GGTGACCTTTGGATCAAGAT+CGG | - | chr7_2:34929872-34929891 | Msa1056660:intron | 45.0% | |
| ACCTTTGGATCAAGATCGGA+TGG | - | chr7_2:34929876-34929895 | Msa1056660:intron | 45.0% | |
| ACCATCCGATCTTGATCCAA+AGG | + | chr7_2:34929880-34929899 | None:intergenic | 45.0% | |
| TAGTACCAGAGTCTCGTTGT+TGG | - | chr7_2:34930488-34930507 | Msa1056660:intron | 45.0% | |
| !! | ATTGTGCTGGCTGAGTAAGT+AGG | - | chr7_2:34930648-34930667 | Msa1056660:intron | 45.0% |
| ! | TGGTCATTGGAGTGCTTAGA+AGG | - | chr7_2:34930701-34930720 | Msa1056660:intron | 45.0% |
| ! | TTGGAGTGCTTAGAAGGCTT+AGG | - | chr7_2:34930707-34930726 | Msa1056660:intron | 45.0% |
| ! | TATTGGTGGCATATCGTCTC+AGG | - | chr7_2:34930822-34930841 | Msa1056660:CDS | 45.0% |
| CAAGGAGGAGAAAAATGAGG+GGG | + | chr7_2:34930998-34931017 | None:intergenic | 45.0% | |
| TCACTGTCATCTACACAAGG+AGG | + | chr7_2:34931013-34931032 | None:intergenic | 45.0% | |
| GGGTATTCGCTGAAACATGT+AGG | + | chr7_2:34931151-34931170 | None:intergenic | 45.0% | |
| ACATGTTTCAGCGAATACCC+TGG | - | chr7_2:34931151-34931170 | Msa1056660:intron | 45.0% | |
| TTTCAGCGAATACCCTGGTA+TGG | - | chr7_2:34931156-34931175 | Msa1056660:intron | 45.0% | |
| TTCAGCGAATACCCTGGTAT+GGG | - | chr7_2:34931157-34931176 | Msa1056660:intron | 45.0% | |
| GAAGAAAGACATCCCATACC+AGG | + | chr7_2:34931172-34931191 | None:intergenic | 45.0% | |
| TTCATGCTTGCGTCTCGATT+TGG | - | chr7_2:34931232-34931251 | Msa1056660:intron | 45.0% | |
| ACTGTACTCAATCTGACAGG+TGG | - | chr7_2:34931318-34931337 | Msa1056660:intron | 45.0% | |
| CTTACCACAATGGTGCATAC+AGG | + | chr7_2:34931370-34931389 | None:intergenic | 45.0% | |
| GTGAGAAGAAAATGGGGACA+AGG | + | chr7_2:34931694-34931713 | None:intergenic | 45.0% | |
| !! | CTTTAGCACTGACAAGAGGA+TGG | + | chr7_2:34931870-34931889 | None:intergenic | 45.0% |
| !! | CGATCTTTAGCACTGACAAG+AGG | + | chr7_2:34931874-34931893 | None:intergenic | 45.0% |
| TGTCAGTGCTAAAGATCGAG+TGG | - | chr7_2:34931876-34931895 | Msa1056660:CDS | 45.0% | |
| !!! | AGAGTGAGTCGTTTTTGCAC+AGG | + | chr7_2:34931946-34931965 | None:intergenic | 45.0% |
| ! | ACAACCGATTCAACCACCCT+CGG | - | chr7_2:34927629-34927648 | Msa1056660:three_prime_UTR | 50.0% |
| CTTTGTGTGGCGATGAAGCA+TGG | - | chr7_2:34927789-34927808 | Msa1056660:CDS | 50.0% | |
| AGCATGGAAGCCATGCCTTA+AGG | - | chr7_2:34927805-34927824 | Msa1056660:CDS | 50.0% | |
| GGGTGAATGTCCTTAAGGCA+TGG | + | chr7_2:34927818-34927837 | None:intergenic | 50.0% | |
| GGGTCCTGTCATGCTTATTG+TGG | - | chr7_2:34927996-34928015 | Msa1056660:intron | 50.0% | |
| GGCACCACAATAAGCATGAC+AGG | + | chr7_2:34928003-34928022 | None:intergenic | 50.0% | |
| TCGGGTTCAGTCCTTGTAGA+TGG | - | chr7_2:34928137-34928156 | Msa1056660:intron | 50.0% | |
| TTCTAGGTGGACCTTCACTC+TGG | - | chr7_2:34928486-34928505 | Msa1056660:intron | 50.0% | |
| GATTGGTACGATCCAAGGCA+AGG | + | chr7_2:34928555-34928574 | None:intergenic | 50.0% | |
| TCTGTATGTCTGTGGCATCC+TGG | + | chr7_2:34928840-34928859 | None:intergenic | 50.0% | |
| CCTGGGGCTTATTGCATTTC+GGG | - | chr7_2:34928942-34928961 | Msa1056660:intron | 50.0% | |
| TGCAGGAGCAGTCATGCTTA+CGG | - | chr7_2:34929572-34929591 | Msa1056660:intron | 50.0% | |
| !! | ATGCACTGACTGCGTGAATG+CGG | + | chr7_2:34929851-34929870 | None:intergenic | 50.0% |
| CATTCACGCAGTCAGTGCAT+CGG | - | chr7_2:34929851-34929870 | Msa1056660:intron | 50.0% | |
| GCTGGCTGAGTAAGTAGGTA+AGG | - | chr7_2:34930653-34930672 | Msa1056660:intron | 50.0% | |
| GAGTGCTTAGAAGGCTTAGG+CGG | - | chr7_2:34930710-34930729 | Msa1056660:intron | 50.0% | |
| CTGAGACAGAGGGTCATGTT+GGG | + | chr7_2:34930864-34930883 | None:intergenic | 50.0% | |
| ACTGAGACAGAGGGTCATGT+TGG | + | chr7_2:34930865-34930884 | None:intergenic | 50.0% | |
| CATCCCTGTATGCACCATTG+TGG | - | chr7_2:34931363-34931382 | Msa1056660:intron | 50.0% | |
| AAGGGAGGCCTCACTAAAGG+TGG | - | chr7_2:34928176-34928195 | Msa1056660:intron | 55.0% | |
| TTAGTAATCGGCGAAGCCGG+TGG | - | chr7_2:34928222-34928241 | Msa1056660:intron | 55.0% | |
| GATCCAAGGCAAGGCTTCCA+GGG | + | chr7_2:34928546-34928565 | None:intergenic | 55.0% | |
| GTGGCATCCTGGTGTAAGAG+AGG | + | chr7_2:34928829-34928848 | None:intergenic | 55.0% | |
| CCCGAAATGCAATAAGCCCC+AGG | + | chr7_2:34928945-34928964 | None:intergenic | 55.0% | |
| !! | TGCACTGACTGCGTGAATGC+GGG | + | chr7_2:34929850-34929869 | None:intergenic | 55.0% |
| ! | GTCAGTGCATCGGTGACCTT+TGG | - | chr7_2:34929861-34929880 | Msa1056660:intron | 55.0% |
| GGAAGCCAACAACGAGACTC+TGG | + | chr7_2:34930496-34930515 | None:intergenic | 55.0% | |
| ATGGCAGGGTTGCCACATGA+AGG | + | chr7_2:34930578-34930597 | None:intergenic | 55.0% | |
| GGCAAGGGAGGCCTCACTAA+AGG | - | chr7_2:34928173-34928192 | Msa1056660:intron | 60.0% | |
| TCTCCCTGGAAGCCTTGCCT+TGG | - | chr7_2:34928540-34928559 | Msa1056660:intron | 60.0% | |
| CGATCCAAGGCAAGGCTTCC+AGG | + | chr7_2:34928547-34928566 | None:intergenic | 60.0% | |
| !! | GCACTGACTGCGTGAATGCG+GGG | + | chr7_2:34929849-34929868 | None:intergenic | 60.0% |
| CGATGAGCCTAGAGCGTGGA+CGG | + | chr7_2:34930523-34930542 | None:intergenic | 60.0% | |
| ! | CGTCCACGCTCTAGGCTCAT+CGG | - | chr7_2:34930521-34930540 | Msa1056660:intron | 60.0% |
| ! | GTCCACGCTCTAGGCTCATC+GGG | - | chr7_2:34930522-34930541 | Msa1056660:intron | 60.0% |
| TCCCTCACCGTCCACGCTCT+AGG | - | chr7_2:34930513-34930532 | Msa1056660:intron | 65.0% | |
| GCCTAGAGCGTGGACGGTGA+GGG | + | chr7_2:34930517-34930536 | None:intergenic | 65.0% | |
| AGCCTAGAGCGTGGACGGTG+AGG | + | chr7_2:34930518-34930537 | None:intergenic | 65.0% | |
| GACCCGATGAGCCTAGAGCG+TGG | + | chr7_2:34930527-34930546 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 34927590 | 34932067 | 34927590 | ID=Msa1056660;Name=Msa1056660 |
| chr7_2 | mRNA | 34927590 | 34932067 | 34927590 | ID=Msa1056660-mRNA-1;Parent=Msa1056660;Name=Msa1056660-mRNA-1;_AED=0.23;_eAED=0.31;_QI=2|0.4|0.66|1|0.2|0.33|6|151|266 |
| chr7_2 | exon | 34927590 | 34927881 | 34927590 | ID=Msa1056660-mRNA-1:exon:6861;Parent=Msa1056660-mRNA-1 |
| chr7_2 | exon | 34928569 | 34928634 | 34928569 | ID=Msa1056660-mRNA-1:exon:6860;Parent=Msa1056660-mRNA-1 |
| chr7_2 | exon | 34930001 | 34930090 | 34930001 | ID=Msa1056660-mRNA-1:exon:6859;Parent=Msa1056660-mRNA-1 |
| chr7_2 | exon | 34930748 | 34930939 | 34930748 | ID=Msa1056660-mRNA-1:exon:6858;Parent=Msa1056660-mRNA-1 |
| chr7_2 | exon | 34931750 | 34931970 | 34931750 | ID=Msa1056660-mRNA-1:exon:6857;Parent=Msa1056660-mRNA-1 |
| chr7_2 | exon | 34931975 | 34932067 | 34931975 | ID=Msa1056660-mRNA-1:exon:6856;Parent=Msa1056660-mRNA-1 |
| chr7_2 | five_prime_UTR | 34932066 | 34932067 | 34932066 | ID=Msa1056660-mRNA-1:five_prime_utr;Parent=Msa1056660-mRNA-1 |
| chr7_2 | CDS | 34931975 | 34932065 | 34931975 | ID=Msa1056660-mRNA-1:cds;Parent=Msa1056660-mRNA-1 |
| chr7_2 | CDS | 34931750 | 34931970 | 34931750 | ID=Msa1056660-mRNA-1:cds;Parent=Msa1056660-mRNA-1 |
| chr7_2 | CDS | 34930748 | 34930939 | 34930748 | ID=Msa1056660-mRNA-1:cds;Parent=Msa1056660-mRNA-1 |
| chr7_2 | CDS | 34930001 | 34930090 | 34930001 | ID=Msa1056660-mRNA-1:cds;Parent=Msa1056660-mRNA-1 |
| chr7_2 | CDS | 34928569 | 34928634 | 34928569 | ID=Msa1056660-mRNA-1:cds;Parent=Msa1056660-mRNA-1 |
| chr7_2 | CDS | 34927741 | 34927881 | 34927741 | ID=Msa1056660-mRNA-1:cds;Parent=Msa1056660-mRNA-1 |
| chr7_2 | three_prime_UTR | 34927590 | 34927740 | 34927590 | ID=Msa1056660-mRNA-1:three_prime_utr;Parent=Msa1056660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
