Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474520 | XP_003602715.1 | 98.000 | 550 | 10 | 1 | 41 | 589 | 95 | 644 | 0.0 | 1126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474520 | sp|A5YVF1|SGS3_SOLLC | 56.261 | 551 | 215 | 8 | 41 | 586 | 92 | 621 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474520 | G7J2Q1 | 98.000 | 550 | 10 | 1 | 41 | 589 | 95 | 644 | 0.0 | 1126 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa0474520 | 0.890180 | 1.243170e-73 | -8.615850e-47 |
| Msa0018160 | Msa0474520 | 0.831183 | 1.928713e-55 | -8.615850e-47 |
| Msa0026800 | Msa0474520 | 0.814189 | 1.749118e-51 | -8.615850e-47 |
| Msa0028420 | Msa0474520 | 0.828891 | 6.984778e-55 | -8.615850e-47 |
| Msa0032430 | Msa0474520 | 0.838914 | 2.166885e-57 | -8.615850e-47 |
| Msa0036870 | Msa0474520 | 0.841203 | 5.480043e-58 | -8.615850e-47 |
| Msa0043230 | Msa0474520 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa0047030 | Msa0474520 | 0.829637 | 4.604853e-55 | -8.615850e-47 |
| Msa0047070 | Msa0474520 | 0.827260 | 1.725962e-54 | -8.615850e-47 |
| Msa0052260 | Msa0474520 | 0.833500 | 5.146804e-56 | -8.615850e-47 |
| Msa0057420 | Msa0474520 | 0.835240 | 1.882644e-56 | -8.615850e-47 |
| Msa0061290 | Msa0474520 | 0.819867 | 9.270143e-53 | -8.615850e-47 |
| Msa0063890 | Msa0474520 | 0.809728 | 1.639696e-50 | -8.615850e-47 |
| Msa0079380 | Msa0474520 | 0.808277 | 3.351787e-50 | -8.615850e-47 |
| Msa0081090 | Msa0474520 | 0.834501 | 2.889896e-56 | -8.615850e-47 |
| Msa0082260 | Msa0474520 | 0.825803 | 3.840246e-54 | -8.615850e-47 |
| Msa0089630 | Msa0474520 | 0.816495 | 5.369203e-52 | -8.615850e-47 |
| Msa0090400 | Msa0474520 | 0.894169 | 3.174422e-75 | -8.615850e-47 |
| Msa0101440 | Msa0474520 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
| Msa0115080 | Msa0474520 | 0.821082 | 4.877058e-53 | -8.615850e-47 |
| Msa0117480 | Msa0474520 | 0.810817 | 9.543742e-51 | -8.615850e-47 |
| Msa0122040 | Msa0474520 | 0.800973 | 1.121149e-48 | -8.615850e-47 |
| Msa0122510 | Msa0474520 | 0.821682 | 3.546219e-53 | -8.615850e-47 |
| Msa0124060 | Msa0474520 | 0.826071 | 3.316863e-54 | -8.615850e-47 |
| Msa0137880 | Msa0474520 | 0.891737 | 3.022067e-74 | -8.615850e-47 |
| Msa0146040 | Msa0474520 | 0.837025 | 6.630574e-57 | -8.615850e-47 |
| Msa0149370 | Msa0474520 | 0.876310 | 1.546242e-68 | -8.615850e-47 |
| Msa0152350 | Msa0474520 | 0.819594 | 1.070186e-52 | -8.615850e-47 |
| Msa0167520 | Msa0474520 | 0.802233 | 6.182368e-49 | -8.615850e-47 |
| Msa0168500 | Msa0474520 | 0.818111 | 2.323952e-52 | -8.615850e-47 |
| Msa0172070 | Msa0474520 | 0.831652 | 1.478154e-55 | -8.615850e-47 |
| Msa0174790 | Msa0474520 | 0.837680 | 4.505975e-57 | -8.615850e-47 |
| Msa0175780 | Msa0474520 | 0.808858 | 2.519109e-50 | -8.615850e-47 |
| Msa0178560 | Msa0474520 | 0.803077 | 4.139813e-49 | -8.615850e-47 |
| Msa0182240 | Msa0474520 | 0.812210 | 4.753979e-51 | -8.615850e-47 |
| Msa0182320 | Msa0474520 | 0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0211150 | Msa0474520 | 0.811147 | 8.096509e-51 | -8.615850e-47 |
| Msa0225680 | Msa0474520 | 0.811303 | 7.489229e-51 | -8.615850e-47 |
| Msa0229230 | Msa0474520 | 0.822477 | 2.319859e-53 | -8.615850e-47 |
| Msa0379770 | Msa0474520 | 0.836288 | 1.021552e-56 | -8.615850e-47 |
| Msa0386090 | Msa0474520 | 0.828272 | 9.855763e-55 | -8.615850e-47 |
| Msa0386850 | Msa0474520 | 0.802414 | 5.673263e-49 | -8.615850e-47 |
| Msa0419700 | Msa0474520 | 0.812317 | 4.505542e-51 | -8.615850e-47 |
| Msa0428150 | Msa0474520 | 0.901445 | 2.660536e-78 | -8.615850e-47 |
| Msa0428590 | Msa0474520 | 0.809687 | 1.673045e-50 | -8.615850e-47 |
| Msa0435210 | Msa0474520 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0442830 | Msa0474520 | 0.878161 | 3.511603e-69 | -8.615850e-47 |
| Msa0462500 | Msa0474520 | 0.907917 | 3.014860e-81 | -8.615850e-47 |
| Msa0465410 | Msa0474520 | 0.815015 | 1.147975e-51 | -8.615850e-47 |
| Msa0467490 | Msa0474520 | 0.826591 | 2.494425e-54 | -8.615850e-47 |
| Msa0474520 | Msa0476650 | 0.830815 | 2.373924e-55 | -8.615850e-47 |
| Msa0474520 | Msa0487420 | 0.834048 | 3.753333e-56 | -8.615850e-47 |
| Msa0474520 | Msa0511270 | 0.810751 | 9.861769e-51 | -8.615850e-47 |
| Msa0474520 | Msa0520890 | 0.865034 | 7.912112e-65 | -8.615850e-47 |
| Msa0474520 | Msa0530780 | 0.822324 | 2.518249e-53 | -8.615850e-47 |
| Msa0474520 | Msa0532070 | 0.823941 | 1.056366e-53 | -8.615850e-47 |
| Msa0474520 | Msa0546680 | 0.801636 | 8.201975e-49 | -8.615850e-47 |
| Msa0474520 | Msa0547900 | 0.844086 | 9.401357e-59 | -8.615850e-47 |
| Msa0474520 | Msa0548170 | 0.828262 | 9.914948e-55 | -8.615850e-47 |
| Msa0474520 | Msa0549370 | 0.822090 | 2.852333e-53 | -8.615850e-47 |
| Msa0474520 | Msa0569200 | 0.851598 | 7.997662e-61 | -8.615850e-47 |
| Msa0474520 | Msa0576880 | 0.818904 | 1.536559e-52 | -8.615850e-47 |
| Msa0474520 | Msa0599870 | 0.817961 | 2.512937e-52 | -8.615850e-47 |
| Msa0474520 | Msa0602880 | 0.837917 | 3.917200e-57 | -8.615850e-47 |
| Msa0474520 | Msa0626450 | 0.820546 | 6.477575e-53 | -8.615850e-47 |
| Msa0474520 | Msa0626490 | 0.818797 | 1.625062e-52 | -8.615850e-47 |
| Msa0474520 | Msa0639430 | 0.812898 | 3.362864e-51 | -8.615850e-47 |
| Msa0474520 | Msa0643940 | 0.830609 | 2.666492e-55 | -8.615850e-47 |
| Msa0474520 | Msa0664600 | 0.819482 | 1.134850e-52 | -8.615850e-47 |
| Msa0474520 | Msa0681250 | 0.810212 | 1.289334e-50 | -8.615850e-47 |
| Msa0474520 | Msa0681270 | 0.823676 | 1.218405e-53 | -8.615850e-47 |
| Msa0474520 | Msa0689520 | 0.881838 | 1.720833e-70 | -8.615850e-47 |
| Msa0474520 | Msa0692740 | 0.804923 | 1.711241e-49 | -8.615850e-47 |
| Msa0474520 | Msa0700460 | 0.823184 | 1.587744e-53 | -8.615850e-47 |
| Msa0474520 | Msa0703050 | 0.804371 | 2.230664e-49 | -8.615850e-47 |
| Msa0474520 | Msa0716830 | 0.810114 | 1.353735e-50 | -8.615850e-47 |
| Msa0474520 | Msa0730430 | 0.844876 | 5.763150e-59 | -8.615850e-47 |
| Msa0474520 | Msa0741840 | 0.811933 | 5.462724e-51 | -8.615850e-47 |
| Msa0474520 | Msa0756490 | 0.807186 | 5.717202e-50 | -8.615850e-47 |
| Msa0474520 | Msa0765840 | 0.828333 | 9.530340e-55 | -8.615850e-47 |
| Msa0474520 | Msa0795560 | 0.811893 | 5.575683e-51 | -8.615850e-47 |
| Msa0474520 | Msa0806790 | 0.844837 | 5.901417e-59 | -8.615850e-47 |
| Msa0474520 | Msa0835490 | 0.830723 | 2.500264e-55 | -8.615850e-47 |
| Msa0474520 | Msa0845440 | 0.821933 | 3.102959e-53 | -8.615850e-47 |
| Msa0474520 | Msa0919770 | 0.826297 | 2.931291e-54 | -8.615850e-47 |
| Msa0474520 | Msa0929690 | 0.821908 | 3.144194e-53 | -8.615850e-47 |
| Msa0474520 | Msa0945110 | 0.877428 | 6.332641e-69 | -8.615850e-47 |
| Msa0474520 | Msa0979730 | 0.820236 | 7.629130e-53 | -8.615850e-47 |
| Msa0474520 | Msa1004800 | 0.813019 | 3.164170e-51 | -8.615850e-47 |
| Msa0474520 | Msa1018690 | 0.842175 | 3.036629e-58 | -8.615850e-47 |
| Msa0474520 | Msa1020560 | 0.824662 | 7.147558e-54 | -8.615850e-47 |
| Msa0474520 | Msa1020670 | 0.818545 | 1.853721e-52 | -8.615850e-47 |
| Msa0474520 | Msa1029250 | 0.834443 | 2.989392e-56 | -8.615850e-47 |
| Msa0474520 | Msa1030800 | 0.820936 | 5.269290e-53 | -8.615850e-47 |
| Msa0474520 | Msa1044680 | 0.822973 | 1.778503e-53 | -8.615850e-47 |
| Msa0474520 | Msa1045140 | 0.831181 | 1.930751e-55 | -8.615850e-47 |
| Msa0474520 | Msa1084960 | 0.838783 | 2.342005e-57 | -8.615850e-47 |
| Msa0474520 | Msa1093570 | 0.813664 | 2.282597e-51 | -8.615850e-47 |
| Msa0474520 | Msa1096960 | 0.833279 | 5.841318e-56 | -8.615850e-47 |
| Msa0474520 | Msa1097980 | 0.841736 | 3.965883e-58 | -8.615850e-47 |
| Msa0474520 | Msa1102220 | 0.808889 | 2.481144e-50 | -8.615850e-47 |
| Msa0474520 | Msa1111090 | 0.812634 | 3.840482e-51 | -8.615850e-47 |
| Msa0474520 | Msa1111130 | 0.815576 | 8.614241e-52 | -8.615850e-47 |
| Msa0474520 | Msa1113340 | 0.801235 | 9.908183e-49 | -8.615850e-47 |
| Msa0474520 | Msa1119940 | 0.811114 | 8.230231e-51 | -8.615850e-47 |
| Msa0474520 | Msa1140220 | 0.809508 | 1.827458e-50 | -8.615850e-47 |
| Msa0474520 | Msa1162150 | 0.819646 | 1.041304e-52 | -8.615850e-47 |
| Msa0474520 | Msa1171710 | 0.800574 | 1.352227e-48 | -8.615850e-47 |
| Msa0474520 | Msa1189070 | 0.803026 | 4.242820e-49 | -8.615850e-47 |
| Msa0474520 | Msa1199570 | 0.807180 | 5.733800e-50 | -8.615850e-47 |
| Msa0474520 | Msa1202620 | 0.822947 | 1.803585e-53 | -8.615850e-47 |
| Msa0474520 | Msa1206460 | 0.812059 | 5.129495e-51 | -8.615850e-47 |
| Msa0474520 | Msa1209460 | 0.824561 | 7.549086e-54 | -8.615850e-47 |
| Msa0474520 | Msa1222850 | 0.852665 | 3.977229e-61 | -8.615850e-47 |
| Msa0474520 | Msa1223470 | 0.835463 | 1.653481e-56 | -8.615850e-47 |
| Msa0474520 | Msa1224930 | 0.805724 | 1.162791e-49 | -8.615850e-47 |
| Msa0474520 | Msa1225700 | 0.821570 | 3.763404e-53 | -8.615850e-47 |
| Msa0474520 | Msa1229500 | 0.811184 | 7.949464e-51 | -8.615850e-47 |
| Msa0474520 | Msa1240770 | 0.824488 | 7.854207e-54 | -8.615850e-47 |
| Msa0474520 | Msa1269480 | 0.854946 | 8.771578e-62 | -8.615850e-47 |
| Msa0474520 | Msa1282260 | 0.859913 | 2.975787e-63 | -8.615850e-47 |
| Msa0474520 | Msa1297230 | 0.801542 | 8.573675e-49 | -8.615850e-47 |
| Msa0474520 | Msa1302830 | 0.853845 | 1.825175e-61 | -8.615850e-47 |
| Msa0474520 | Msa1321340 | 0.861363 | 1.081597e-63 | -8.615850e-47 |
| Msa0474520 | Msa1324080 | 0.813299 | 2.746420e-51 | -8.615850e-47 |
| Msa0474520 | Msa1328710 | 0.817478 | 3.229478e-52 | -8.615850e-47 |
| Msa0474520 | Msa1330410 | 0.812320 | 4.499261e-51 | -8.615850e-47 |
| Msa0474520 | Msa1333080 | 0.804575 | 2.022541e-49 | -8.615850e-47 |
| Msa0474520 | Msa1369550 | 0.871624 | 5.932578e-67 | -8.615850e-47 |
| Msa0474520 | Msa1370840 | 0.841947 | 3.488078e-58 | -8.615850e-47 |
| Msa0474520 | Msa1372230 | 0.816906 | 4.343003e-52 | -8.615850e-47 |
| Msa0474520 | Msa1377310 | 0.803200 | 3.905355e-49 | -8.615850e-47 |
| Msa0474520 | Msa1387870 | 0.807430 | 5.073666e-50 | -8.615850e-47 |
| Msa0474520 | Msa1390440 | 0.815637 | 8.348414e-52 | -8.615850e-47 |
| Msa0474520 | Msa1391770 | 0.837602 | 4.718704e-57 | -8.615850e-47 |
| Msa0474520 | Msa1392240 | 0.803417 | 3.520752e-49 | -8.615850e-47 |
| Msa0474520 | Msa1413690 | 0.804610 | 1.988567e-49 | -8.615850e-47 |
| Msa0474520 | Msa1419370 | 0.816774 | 4.649329e-52 | -8.615850e-47 |
| Msa0474520 | Msa1422420 | 0.822530 | 2.255109e-53 | -8.615850e-47 |
| Msa0474520 | Msa1432970 | 0.812799 | 3.534083e-51 | -8.615850e-47 |
| Msa0474520 | Msa1440560 | 0.807226 | 5.605253e-50 | -8.615850e-47 |
| Msa0474520 | Msa1440960 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa0474520 | Msa1454140 | 0.852393 | 4.754905e-61 | -8.615850e-47 |
| Msa0474520 | Msa1465440 | 0.801132 | 1.040108e-48 | -8.615850e-47 |
| Msa0255090 | Msa0474520 | 0.849524 | 3.058975e-60 | -8.615850e-47 |
| Msa0259380 | Msa0474520 | 0.848638 | 5.396644e-60 | -8.615850e-47 |
| Msa0260780 | Msa0474520 | 0.805561 | 1.257742e-49 | -8.615850e-47 |
| Msa0267110 | Msa0474520 | 0.871704 | 5.578618e-67 | -8.615850e-47 |
| Msa0292330 | Msa0474520 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
| Msa0292400 | Msa0474520 | 0.802029 | 6.810754e-49 | -8.615850e-47 |
| Msa0307770 | Msa0474520 | 0.817836 | 2.682052e-52 | -8.615850e-47 |
| Msa0312700 | Msa0474520 | 0.801527 | 8.633055e-49 | -8.615850e-47 |
| Msa0337440 | Msa0474520 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0342310 | Msa0474520 | 0.806210 | 9.189730e-50 | -8.615850e-47 |
| Msa0349710 | Msa0474520 | 0.825935 | 3.572413e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474520 | MtrunA17_Chr3g0131301 | 98.000 | 550 | 10 | 1 | 41 | 589 | 166 | 715 | 0.0 | 1126 |
| Msa0474520 | MtrunA17_Chr3g0131291 | 81.976 | 577 | 103 | 1 | 13 | 589 | 66 | 641 | 0.0 | 897 |
| Msa0474520 | MtrunA17_Chr2g0278291 | 48.052 | 462 | 201 | 5 | 135 | 588 | 193 | 623 | 8.79e-142 | 424 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474520 | AT5G23570.1 | 52.922 | 599 | 228 | 12 | 31 | 584 | 29 | 618 | 0.0 | 547 |
| Msa0474520 | AT5G23570.3 | 52.922 | 599 | 228 | 12 | 31 | 584 | 29 | 618 | 0.0 | 547 |
| Msa0474520 | AT5G23570.4 | 61.443 | 402 | 144 | 6 | 71 | 469 | 108 | 501 | 5.07e-165 | 480 |
| Msa0474520 | AT5G23570.2 | 61.443 | 402 | 144 | 6 | 71 | 469 | 108 | 501 | 5.07e-165 | 480 |
Find 181 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCACTCATTTGTCGAATT+TGG | 0.126725 | 3_3:+77422159 | None:intergenic |
| CGTTCCTCCTCTGCATTTGC+AGG | 0.237429 | 3_3:+77421117 | None:intergenic |
| CATTGTCTTTCGCAGCTTCT+CGG | 0.262638 | 3_3:+77422049 | None:intergenic |
| CTGGGGAAGCATTTGGTAAA+TGG | 0.288604 | 3_3:-77422935 | Msa0474520:CDS |
| TAGTCAGGTTATCCAAATTC+TGG | 0.305878 | 3_3:+77423159 | None:intergenic |
| CAGCCAGCCACTGGTGGATA+TGG | 0.307074 | 3_3:-77423449 | Msa0474520:CDS |
| CATATCCACCAGTGGCTGGC+TGG | 0.313166 | 3_3:+77423450 | None:intergenic |
| CACATCCTCGTCTTTCAATA+TGG | 0.331865 | 3_3:+77423724 | None:intergenic |
| CTCTACAGGGTGGCTGGAAC+TGG | 0.336380 | 3_3:-77423391 | Msa0474520:CDS |
| CTAAAACAAAGGGTTCAAAA+AGG | 0.344221 | 3_3:-77423031 | Msa0474520:CDS |
| AGCTCTCCATTTCTTTGTCC+TGG | 0.345894 | 3_3:+77420752 | None:intergenic |
| TTCCCTTCCATTACCTCAAA+AGG | 0.355110 | 3_3:-77420231 | Msa0474520:three_prime_UTR |
| ATGAATACCGCTGAAACATT+AGG | 0.355356 | 3_3:-77420495 | Msa0474520:three_prime_UTR |
| CATCATTCCTCCTCCTCTAC+AGG | 0.356057 | 3_3:-77423405 | Msa0474520:CDS |
| TGTTTGGCCTCCAATGGTTA+TGG | 0.357696 | 3_3:-77422877 | Msa0474520:CDS |
| CAATGCTCTCTTCATGGGCT+TGG | 0.358604 | 3_3:+77420704 | None:intergenic |
| AAAAGGATCATGAAATTGTT+TGG | 0.358611 | 3_3:-77422893 | Msa0474520:CDS |
| AGCCTCAGCTAGTGGTTATC+TGG | 0.359386 | 3_3:-77422544 | Msa0474520:CDS |
| GGTGGCAATCGACAGCTCTT+TGG | 0.361150 | 3_3:-77422429 | Msa0474520:CDS |
| TTGATGAGGAATTGCGTAGA+AGG | 0.372096 | 3_3:-77422977 | Msa0474520:CDS |
| TAGCAGCAATGCTCTCTTCA+TGG | 0.389671 | 3_3:+77420698 | None:intergenic |
| ATATCCACCAGTGGCTGGCT+GGG | 0.390269 | 3_3:+77423451 | None:intergenic |
| CCAGCTTGTCAAGGTGGTCC+TGG | 0.394071 | 3_3:-77423098 | Msa0474520:CDS |
| AAAGCTCTTGAGGAATCCTT+TGG | 0.402884 | 3_3:-77422080 | Msa0474520:CDS |
| CTCCTCCTCTACAGGGTGGC+TGG | 0.406525 | 3_3:-77423397 | Msa0474520:CDS |
| GAGTTGCATACCCTTGTGTA+TGG | 0.409163 | 3_3:-77420360 | Msa0474520:three_prime_UTR |
| GGACAGTGCCACTGTCTCTC+TGG | 0.414276 | 3_3:+77423119 | None:intergenic |
| TTTGGTGCACTACCATTTCC+TGG | 0.415937 | 3_3:+77422177 | None:intergenic |
| CATTTATCTGATCAATAGTC+AGG | 0.417399 | 3_3:+77423144 | None:intergenic |
| ACCAGCATTTGGTGTCTGCC+AGG | 0.423154 | 3_3:+77423508 | None:intergenic |
| TGCTCTTCTTCCGTGTCTCA+TGG | 0.423168 | 3_3:+77423201 | None:intergenic |
| CCTTGTGTATGGGGTGCAAT+TGG | 0.424768 | 3_3:-77420349 | Msa0474520:three_prime_UTR |
| TCTTCAAATAAAGAAGTTGC+TGG | 0.427490 | 3_3:+77422132 | None:intergenic |
| TTATCTGGAGGCAGAACGTC+TGG | 0.438026 | 3_3:-77422529 | Msa0474520:CDS |
| GGAGAAACAAATTGTATCTT+CGG | 0.438156 | 3_3:+77422454 | None:intergenic |
| GGAGGACGACTGTGATGATC+TGG | 0.438994 | 3_3:-77423282 | Msa0474520:CDS |
| TTACCAAATGCTTCCCCAGC+TGG | 0.441325 | 3_3:+77422939 | None:intergenic |
| GTTTATTTAGTGGACAGGTA+TGG | 0.443972 | 3_3:-77422670 | Msa0474520:intron |
| GTCCCAGCTGGGGAAGCATT+TGG | 0.446522 | 3_3:-77422942 | Msa0474520:CDS |
| TTCTTCTGTTCAAACTCCTC+TGG | 0.450708 | 3_3:+77423338 | None:intergenic |
| CGAACTCCAGGACAAAGAAA+TGG | 0.455545 | 3_3:-77420758 | Msa0474520:CDS |
| GAAGAGGCACTGGGAGGAAG+AGG | 0.456512 | 3_3:-77420671 | Msa0474520:CDS |
| GTAAGAGCACGGCATTCATA+TGG | 0.457091 | 3_3:-77422606 | Msa0474520:CDS |
| GGAGAGCTTTGTCGAAGAAA+AGG | 0.460169 | 3_3:-77420737 | Msa0474520:CDS |
| GAGTTTGAACAGAAGAATGA+TGG | 0.460624 | 3_3:-77423332 | Msa0474520:CDS |
| TATCCACCAGTGGCTGGCTG+GGG | 0.464606 | 3_3:+77423452 | None:intergenic |
| AGTGGAGCTGGAAGAGCTGC+TGG | 0.466783 | 3_3:-77423536 | Msa0474520:CDS |
| GAAGAAGTTTGATGAGGACT+TGG | 0.467634 | 3_3:-77420638 | Msa0474520:CDS |
| ACGACCTGGAGGCTTTCAAC+AGG | 0.471763 | 3_3:-77422389 | Msa0474520:CDS |
| CTGTAGAGGAGGAGGAATGA+TGG | 0.473766 | 3_3:+77423406 | None:intergenic |
| TTGACACTCGCGGTGTTGCA+AGG | 0.475436 | 3_3:-77420416 | Msa0474520:three_prime_UTR |
| AGGTTTAAAAGAAGAAGAAA+AGG | 0.475660 | 3_3:-77422910 | Msa0474520:CDS |
| ATGAATCATGCTAAAACAAA+GGG | 0.476704 | 3_3:-77423041 | Msa0474520:CDS |
| CTGGGAGGAAGAGGTGGAGA+TGG | 0.478290 | 3_3:-77420662 | Msa0474520:CDS |
| TTTATTTAGTGGACAGGTAT+GGG | 0.478428 | 3_3:-77422669 | Msa0474520:intron |
| AATGAGGTCCTACCAGGAAA+TGG | 0.480977 | 3_3:-77422189 | Msa0474520:CDS |
| CTGCTATGAAGAAGAGGCAC+TGG | 0.481919 | 3_3:-77420681 | Msa0474520:CDS |
| GCTTCAAGCTCCGTCTCTGT+TGG | 0.485056 | 3_3:+77423801 | None:intergenic |
| TAAAATAGTCAAGAAGCTCT+TGG | 0.493762 | 3_3:+77422643 | None:intergenic |
| TGAACAAGAACGATTCTTCA+AGG | 0.493855 | 3_3:-77421241 | Msa0474520:CDS |
| GGCACTACAGTAGTCCCAGC+TGG | 0.494847 | 3_3:-77422954 | Msa0474520:CDS |
| GAAGAGCTGCTGGAAACCCC+TGG | 0.495073 | 3_3:-77423526 | Msa0474520:CDS |
| GGTCTCATATAACCAGCATT+TGG | 0.496607 | 3_3:+77423497 | None:intergenic |
| TGAACAAGATGAAAATGATA+AGG | 0.498263 | 3_3:-77422838 | Msa0474520:intron |
| GGAAGGCCCCAGCCAGCCAC+TGG | 0.498896 | 3_3:-77423458 | Msa0474520:CDS |
| CTTCCATTGCCTCTACCAGC+GGG | 0.500451 | 3_3:+77423476 | None:intergenic |
| CCAGCATTTGGTGTCTGCCA+GGG | 0.501741 | 3_3:+77423509 | None:intergenic |
| AAATTGAGAATTTGGAACTC+AGG | 0.502531 | 3_3:-77420465 | Msa0474520:three_prime_UTR |
| GATGAATCATGCTAAAACAA+AGG | 0.503073 | 3_3:-77423042 | Msa0474520:CDS |
| TCCCTTCCATTACCTCAAAA+GGG | 0.510665 | 3_3:-77420230 | Msa0474520:three_prime_UTR |
| TCTCTTTGGATGTAGGGTGG+AGG | 0.511496 | 3_3:-77420797 | Msa0474520:intron |
| TATCCATATCCACCAGTGGC+TGG | 0.511523 | 3_3:+77423446 | None:intergenic |
| GTGCACTACCATTTCCTGGT+AGG | 0.512382 | 3_3:+77422181 | None:intergenic |
| TGAGGACTTGGCCAAACTCA+TGG | 0.512417 | 3_3:-77420626 | Msa0474520:CDS |
| CCTAAAATTTGTCGAACTCC+AGG | 0.515170 | 3_3:-77420770 | Msa0474520:CDS |
| TGAAATTGTTTGGCCTCCAA+TGG | 0.515700 | 3_3:-77422883 | Msa0474520:CDS |
| CAGCATTTGGTGTCTGCCAG+GGG | 0.520729 | 3_3:+77423510 | None:intergenic |
| AGCAGCAATGCTCTCTTCAT+GGG | 0.523970 | 3_3:+77420699 | None:intergenic |
| ATCATTCCTCCTCCTCTACA+GGG | 0.524207 | 3_3:-77423404 | Msa0474520:CDS |
| TAAAAGAAATGCAAAGGAAG+AGG | 0.526529 | 3_3:-77421196 | Msa0474520:CDS |
| CCAGGACCACCTTGACAAGC+TGG | 0.529466 | 3_3:+77423098 | None:intergenic |
| AGATACAATTTGTTTCTCCC+TGG | 0.529912 | 3_3:-77422450 | Msa0474520:CDS |
| TCGACAGCTCTTTGGATACA+TGG | 0.530084 | 3_3:-77422421 | Msa0474520:CDS |
| TCATCCCTCGATGACCTTGA+GGG | 0.531293 | 3_3:+77422583 | None:intergenic |
| GAAACATTCAAAAGCTCTTG+AGG | 0.531663 | 3_3:-77422090 | Msa0474520:CDS |
| GAGGCACTGGGAGGAAGAGG+TGG | 0.531915 | 3_3:-77420668 | Msa0474520:CDS |
| CTCTTTGGATGTAGGGTGGA+GGG | 0.533016 | 3_3:-77420796 | Msa0474520:intron |
| TGATGAGGAATTGCGTAGAA+GGG | 0.533128 | 3_3:-77422976 | Msa0474520:CDS |
| TACAATTTGTTTCTCCCTGG+TGG | 0.533325 | 3_3:-77422447 | Msa0474520:CDS |
| TATATGAGACCCGCTGGTAG+AGG | 0.535877 | 3_3:-77423485 | Msa0474520:CDS |
| TCTTTATTTGAAGAACAAGA+TGG | 0.537740 | 3_3:-77422123 | Msa0474520:CDS |
| GAAGCATTTGGTAAATGGAA+AGG | 0.538253 | 3_3:-77422930 | Msa0474520:CDS |
| GTCCAATGGTCTCTTTCAGT+GGG | 0.538468 | 3_3:-77420572 | Msa0474520:three_prime_UTR |
| TACCAAATGCTTCCCCAGCT+GGG | 0.538618 | 3_3:+77422940 | None:intergenic |
| AGACACGGAAGAAGAGCAAA+TGG | 0.539757 | 3_3:-77423196 | Msa0474520:CDS |
| GTGGTCCTGGTGCTATTGAT+TGG | 0.540649 | 3_3:-77423085 | Msa0474520:CDS |
| GTATGAAATGAGGTCCTACC+AGG | 0.541290 | 3_3:-77422195 | Msa0474520:CDS |
| AAGAGCTGTCGATTGCCACC+AGG | 0.541548 | 3_3:+77422432 | None:intergenic |
| AGGCCCCAGCCAGCCACTGG+TGG | 0.541602 | 3_3:-77423455 | Msa0474520:CDS |
| CGAGAAGCTGCGAAAGACAA+TGG | 0.543259 | 3_3:-77422048 | Msa0474520:CDS |
| AAGGTGAAGAAGACAACTAC+TGG | 0.547743 | 3_3:-77421141 | Msa0474520:CDS |
| GCACTACAGTAGTCCCAGCT+GGG | 0.548415 | 3_3:-77422953 | Msa0474520:CDS |
| CCTTCCATTGCCTCTACCAG+CGG | 0.549092 | 3_3:+77423475 | None:intergenic |
| AGACCCGCTGGTAGAGGCAA+TGG | 0.549173 | 3_3:-77423479 | Msa0474520:CDS |
| CAGCCACCCTGTAGAGGAGG+AGG | 0.549991 | 3_3:+77423398 | None:intergenic |
| CACTGTCCAGCTTGTCAAGG+TGG | 0.550353 | 3_3:-77423104 | Msa0474520:CDS |
| CGGCATTCATATGGCCCTCA+AGG | 0.550943 | 3_3:-77422597 | Msa0474520:CDS |
| AGTTGCATACCCTTGTGTAT+GGG | 0.552387 | 3_3:-77420359 | Msa0474520:three_prime_UTR |
| GTGTGGAATAACAGTGGAGC+TGG | 0.554023 | 3_3:-77423548 | Msa0474520:CDS |
| TTCTGAACCATAACCATTGG+AGG | 0.554853 | 3_3:+77422870 | None:intergenic |
| GGATTTCGAGAGGATGCAGC+AGG | 0.555022 | 3_3:-77421175 | Msa0474520:CDS |
| CCCTGGCAGACACCAAATGC+TGG | 0.558318 | 3_3:-77423509 | Msa0474520:CDS |
| TGTAGAGGAGGAGGAATGAT+GGG | 0.560314 | 3_3:+77423407 | None:intergenic |
| AAGGAACTAATAGAGAAGCT+TGG | 0.563248 | 3_3:-77422488 | Msa0474520:CDS |
| AATGAGTGATGAATATGATT+CGG | 0.563280 | 3_3:-77423240 | Msa0474520:CDS |
| TTCCAGCCACCCTGTAGAGG+AGG | 0.563976 | 3_3:+77423395 | None:intergenic |
| CTGCAAATGCAGAGGAGGAA+CGG | 0.564181 | 3_3:-77421116 | Msa0474520:CDS |
| GTCAAAAGAGCCATGAGACA+CGG | 0.572339 | 3_3:-77423211 | Msa0474520:CDS |
| ATGTTTGAAGCCTCAGCTAG+TGG | 0.573694 | 3_3:-77422552 | Msa0474520:CDS |
| CAGTTCCAGCCACCCTGTAG+AGG | 0.573745 | 3_3:+77423392 | None:intergenic |
| GCTGGTTATATGAGACCCGC+TGG | 0.578960 | 3_3:-77423491 | Msa0474520:CDS |
| GCATGAAGAAATAAAAGAAG+AGG | 0.582341 | 3_3:-77421988 | Msa0474520:intron |
| CAATGGTCTCTTTCAGTGGG+GGG | 0.583898 | 3_3:-77420569 | Msa0474520:three_prime_UTR |
| GCATGTTTATAAACACAGGC+AGG | 0.584606 | 3_3:-77420534 | Msa0474520:three_prime_UTR |
| AGTCCAATGGTCTCTTTCAG+TGG | 0.586479 | 3_3:-77420573 | Msa0474520:three_prime_UTR |
| TTGCAACACCGCGAGTGTCA+AGG | 0.588629 | 3_3:+77420418 | None:intergenic |
| GCATTGCTGCTATGAAGAAG+AGG | 0.588894 | 3_3:-77420687 | Msa0474520:CDS |
| AATGCCTGTTGAAAGCCTCC+AGG | 0.589670 | 3_3:+77422385 | None:intergenic |
| CCACGATAAAAGAAATGCAA+AGG | 0.589885 | 3_3:-77421202 | Msa0474520:CDS |
| GCAGCAGGAAGAGCGTGAGA+AGG | 0.590681 | 3_3:-77421160 | Msa0474520:CDS |
| TGCTATGAAGAAGAGGCACT+GGG | 0.592507 | 3_3:-77420680 | Msa0474520:CDS |
| GGTGCTATTGATTGGTACAG+AGG | 0.593628 | 3_3:-77423077 | Msa0474520:CDS |
| CCAATTGCACCCCATACACA+AGG | 0.602727 | 3_3:+77420349 | None:intergenic |
| GCTTTCAACAGGCATTGCCA+AGG | 0.605892 | 3_3:-77422378 | Msa0474520:intron |
| CTGTACCAATCAATAGCACC+AGG | 0.608472 | 3_3:+77423080 | None:intergenic |
| GTTGCATACCCTTGTGTATG+GGG | 0.610570 | 3_3:-77420358 | Msa0474520:three_prime_UTR |
| CCAATGGTCTCTTTCAGTGG+GGG | 0.611000 | 3_3:-77420570 | Msa0474520:three_prime_UTR |
| AGAGCTGTCGATTGCCACCA+GGG | 0.611123 | 3_3:+77422433 | None:intergenic |
| TGGCACTGTCCAGCTTGTCA+AGG | 0.612358 | 3_3:-77423107 | Msa0474520:CDS |
| GTCAGCTTTGTCATGCTGAG+AGG | 0.612831 | 3_3:+77423766 | None:intergenic |
| CATGGCAACTAAAGACGACC+TGG | 0.613162 | 3_3:-77422403 | Msa0474520:CDS |
| TGGTCCTGCAAATGCAGAGG+AGG | 0.614122 | 3_3:-77421121 | Msa0474520:CDS |
| CCGCTGGTAGAGGCAATGGA+AGG | 0.614168 | 3_3:-77423475 | Msa0474520:CDS |
| CAAGACTCAAGTATGAAATG+AGG | 0.614242 | 3_3:-77422205 | Msa0474520:CDS |
| TGGCTCAAAAGCAGGGCGTG+TGG | 0.616563 | 3_3:-77423565 | Msa0474520:intron |
| GCTTGCTGTACTTCTTGATG+AGG | 0.619881 | 3_3:-77422991 | Msa0474520:CDS |
| CTCATCCCTCGATGACCTTG+AGG | 0.620639 | 3_3:+77422582 | None:intergenic |
| CTTATGCGGCAGTAAGAGCA+CGG | 0.623295 | 3_3:-77422617 | Msa0474520:CDS |
| GATGGAGAAGAAGTTTGATG+AGG | 0.626676 | 3_3:-77420644 | Msa0474520:CDS |
| CTTCTCGGTCACTATACCAA+AGG | 0.627323 | 3_3:+77422064 | None:intergenic |
| GATGAGGAATTGCGTAGAAG+GGG | 0.628195 | 3_3:-77422975 | Msa0474520:CDS |
| ATGGCCCTCAAGGTCATCGA+GGG | 0.629112 | 3_3:-77422587 | Msa0474520:CDS |
| GTGTTCTGAACCATAACCAT+TGG | 0.630457 | 3_3:+77422867 | None:intergenic |
| ACTGGAAATCAACTCATGCA+AGG | 0.631690 | 3_3:-77423373 | Msa0474520:CDS |
| TACTGGTCCTGCAAATGCAG+AGG | 0.631949 | 3_3:-77421124 | Msa0474520:CDS |
| GTCTAACTTAGAAAGGAAGG+TGG | 0.634743 | 3_3:-77423830 | Msa0474520:intron |
| GTGGGCAGTTCCAACAGAGA+CGG | 0.635033 | 3_3:-77423811 | Msa0474520:CDS |
| AAGGAATGAAATTGTACCAG+AGG | 0.635504 | 3_3:-77423354 | Msa0474520:CDS |
| CTCAGCTAGTGGTTATCTGG+AGG | 0.635751 | 3_3:-77422541 | Msa0474520:CDS |
| AAGAACGATTCTTCAAGGAA+CGG | 0.640239 | 3_3:-77421236 | Msa0474520:CDS |
| TGGAGGAGAATCGCATTGTG+AGG | 0.644382 | 3_3:-77422028 | Msa0474520:CDS |
| CTCCAGATAACCACTAGCTG+AGG | 0.645712 | 3_3:+77422542 | None:intergenic |
| TCTAACTTAGAAAGGAAGGT+GGG | 0.652391 | 3_3:-77423829 | Msa0474520:intron |
| TCCAATGGTCTCTTTCAGTG+GGG | 0.654219 | 3_3:-77420571 | Msa0474520:three_prime_UTR |
| AGGTGCATGTTTATAAACAC+AGG | 0.654991 | 3_3:-77420538 | Msa0474520:three_prime_UTR |
| AGGAGAATCGCATTGTGAGG+CGG | 0.658078 | 3_3:-77422025 | Msa0474520:CDS |
| TAAATGAACCAGAGAGACAG+TGG | 0.663976 | 3_3:-77423127 | Msa0474520:CDS |
| CAAAGGAAGAGGATTTCGAG+AGG | 0.667588 | 3_3:-77421185 | Msa0474520:CDS |
| CACTACAGTAGTCCCAGCTG+GGG | 0.668801 | 3_3:-77422952 | Msa0474520:CDS |
| ATTCCTCCTCCTCTACAGGG+TGG | 0.683487 | 3_3:-77423401 | Msa0474520:CDS |
| ATTGTATCCATATCCACCAG+TGG | 0.693540 | 3_3:+77423442 | None:intergenic |
| GTATTGCTCCTTGACACTCG+CGG | 0.693683 | 3_3:-77420426 | Msa0474520:three_prime_UTR |
| CCAAATTCGACAAATGAGTG+AGG | 0.699862 | 3_3:-77422159 | Msa0474520:CDS |
| CAGGGCGTGTGGAATAACAG+TGG | 0.701316 | 3_3:-77423554 | Msa0474520:CDS |
| GAAGCTGCGAAAGACAATGG+AGG | 0.702107 | 3_3:-77422045 | Msa0474520:CDS |
| CATTCCAGTCGATATGAGGG+AGG | 0.704655 | 3_3:-77423961 | None:intergenic |
| GGCAACTAAAGACGACCTGG+AGG | 0.707545 | 3_3:-77422400 | Msa0474520:CDS |
| TATGGCCCTCAAGGTCATCG+AGG | 0.715301 | 3_3:-77422588 | Msa0474520:CDS |
| ACGTACCATATTGAAAGACG+AGG | 0.718589 | 3_3:-77423729 | Msa0474520:CDS |
| CAATTGCACCCCATACACAA+GGG | 0.721172 | 3_3:+77420350 | None:intergenic |
| TATGAAGAAGAGGCACTGGG+AGG | 0.734930 | 3_3:-77420677 | Msa0474520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTTTGTTTATTTAG+TGG | - | chr3_3:77421491-77421510 | Msa0474520:intron | 15.0% |
| !!! | AAAATTTTATTGGCAATTTA+TGG | - | chr3_3:77423307-77423326 | Msa0474520:CDS | 15.0% |
| !! | TCTTTATACTTTCACTATTT+AGG | - | chr3_3:77421840-77421859 | Msa0474520:intron | 20.0% |
| !!! | TGTCCACAAATAATTTTATA+CGG | + | chr3_3:77422275-77422294 | None:intergenic | 20.0% |
| !! | GATTTATAATAAACACAAAC+TGG | + | chr3_3:77422664-77422683 | None:intergenic | 20.0% |
| !!! | TTTTGTTAATTTTGCAAAGT+TGG | - | chr3_3:77422787-77422806 | Msa0474520:intron | 20.0% |
| !!! | ACACATGTACAAAATTTTAT+TGG | - | chr3_3:77423297-77423316 | Msa0474520:CDS | 20.0% |
| !!! | GTTTTTTGAAATTGAGAATT+TGG | - | chr3_3:77423698-77423717 | Msa0474520:intron | 20.0% |
| !!! | AATTGTTATTTGTGTACAAG+TGG | + | chr3_3:77420246-77420265 | None:intergenic | 25.0% |
| ! | AATGAGTGATGAATATGATT+CGG | - | chr3_3:77420931-77420950 | Msa0474520:intron | 25.0% |
| ! | ATGAATCATGCTAAAACAAA+GGG | - | chr3_3:77421130-77421149 | Msa0474520:CDS | 25.0% |
| ! | TAAAACAAAGGGTTCAAAAA+GGG | - | chr3_3:77421141-77421160 | Msa0474520:CDS | 25.0% |
| ! | AGGTTTAAAAGAAGAAGAAA+AGG | - | chr3_3:77421261-77421280 | Msa0474520:intron | 25.0% |
| ! | AAAAGGATCATGAAATTGTT+TGG | - | chr3_3:77421278-77421297 | Msa0474520:intron | 25.0% |
| ! | TGAACAAGATGAAAATGATA+AGG | - | chr3_3:77421333-77421352 | Msa0474520:intron | 25.0% |
| !! | TTCTTATTTGTATCAAATGC+TGG | - | chr3_3:77421367-77421386 | Msa0474520:intron | 25.0% |
| !! | TCTTTATTTGAAGAACAAGA+TGG | - | chr3_3:77422048-77422067 | Msa0474520:CDS | 25.0% |
| ! | TGTCCGTATAAAATTATTTG+TGG | - | chr3_3:77422269-77422288 | Msa0474520:intron | 25.0% |
| ! | ATATTTGTGTAGTTCATGAA+TGG | - | chr3_3:77422359-77422378 | Msa0474520:intron | 25.0% |
| ! | TCTTAGAAAGATTTGGATTT+GGG | - | chr3_3:77422589-77422608 | Msa0474520:CDS | 25.0% |
| ! | TCTGATTCAAGAGATAAAAT+GGG | + | chr3_3:77422763-77422782 | None:intergenic | 25.0% |
| ! | TTCTGATTCAAGAGATAAAA+TGG | + | chr3_3:77422764-77422783 | None:intergenic | 25.0% |
| ! | TTAAGACAAGAAACCTATAA+GGG | + | chr3_3:77422830-77422849 | None:intergenic | 25.0% |
| !! | TTTAAGACAAGAAACCTATA+AGG | + | chr3_3:77422831-77422850 | None:intergenic | 25.0% |
| ! | AGATCAAATTCATTGCAATT+CGG | + | chr3_3:77423357-77423376 | None:intergenic | 25.0% |
| ! | AACTCGCAATTTGTAAAAAT+AGG | + | chr3_3:77423796-77423815 | None:intergenic | 25.0% |
| GATTGAAGTCTAACTTAGAA+AGG | - | chr3_3:77420334-77420353 | Msa0474520:three_prime_UTR | 30.0% | |
| CAAAAAGTTCTTCCAGAATT+TGG | - | chr3_3:77421000-77421019 | Msa0474520:intron | 30.0% | |
| CATTTATCTGATCAATAGTC+AGG | + | chr3_3:77421030-77421049 | None:intergenic | 30.0% | |
| !!! | TGTTTTAGCATGATTCATCA+GGG | + | chr3_3:77421128-77421147 | None:intergenic | 30.0% |
| !!! | TTGTTTTAGCATGATTCATC+AGG | + | chr3_3:77421129-77421148 | None:intergenic | 30.0% |
| GATGAATCATGCTAAAACAA+AGG | - | chr3_3:77421129-77421148 | Msa0474520:CDS | 30.0% | |
| CTAAAACAAAGGGTTCAAAA+AGG | - | chr3_3:77421140-77421159 | Msa0474520:CDS | 30.0% | |
| !!! | GTTTTGTTTATTTAGTGGAC+AGG | - | chr3_3:77421496-77421515 | Msa0474520:intron | 30.0% |
| ! | TTTATTTAGTGGACAGGTAT+GGG | - | chr3_3:77421502-77421521 | Msa0474520:intron | 30.0% |
| TAAAATAGTCAAGAAGCTCT+TGG | + | chr3_3:77421531-77421550 | None:intergenic | 30.0% | |
| !!! | TGACTATTTTAGCTCTTATG+CGG | - | chr3_3:77421540-77421559 | Msa0474520:intron | 30.0% |
| GGAGAAACAAATTGTATCTT+CGG | + | chr3_3:77421720-77421739 | None:intergenic | 30.0% | |
| AGAATCAGATTAAAAGAGAG+AGG | + | chr3_3:77421936-77421955 | None:intergenic | 30.0% | |
| ! | CTCTTTTAATCTGATTCTGT+AGG | - | chr3_3:77421938-77421957 | Msa0474520:intron | 30.0% |
| TCTTCAAATAAAGAAGTTGC+TGG | + | chr3_3:77422042-77422061 | None:intergenic | 30.0% | |
| GCATGAAGAAATAAAAGAAG+AGG | - | chr3_3:77422183-77422202 | Msa0474520:CDS | 30.0% | |
| CACATTACTTGAAGCATATT+AGG | - | chr3_3:77422222-77422241 | Msa0474520:intron | 30.0% | |
| ! | ATCAAGTTTGAGTTAGGATA+TGG | - | chr3_3:77422295-77422314 | Msa0474520:intron | 30.0% |
| GTCTTAGAAAGATTTGGATT+TGG | - | chr3_3:77422588-77422607 | Msa0474520:CDS | 30.0% | |
| !! | GTACTTATGTTTTGTTGTAG+AGG | - | chr3_3:77422616-77422635 | Msa0474520:CDS | 30.0% |
| ! | AAACTGGTTCATCAATAGTA+TGG | + | chr3_3:77422648-77422667 | None:intergenic | 30.0% |
| ! | ACAACTTATCTGAAATTACC+AGG | + | chr3_3:77422713-77422732 | None:intergenic | 30.0% |
| TAAAAGAAATGCAAAGGAAG+AGG | - | chr3_3:77422975-77422994 | Msa0474520:CDS | 30.0% | |
| AACTAGTGTCATGTGAAATT+AGG | + | chr3_3:77423231-77423250 | None:intergenic | 30.0% | |
| TGCAATGAATTTGATCTCTT+TGG | - | chr3_3:77423360-77423379 | Msa0474520:CDS | 30.0% | |
| AATTTGATCTCTTTGGATGT+AGG | - | chr3_3:77423367-77423386 | Msa0474520:CDS | 30.0% | |
| ATTTGATCTCTTTGGATGTA+GGG | - | chr3_3:77423368-77423387 | Msa0474520:CDS | 30.0% | |
| CAAAAAACCTAATGTTTCAG+CGG | + | chr3_3:77423686-77423705 | None:intergenic | 30.0% | |
| ! | AAATTGAGAATTTGGAACTC+AGG | - | chr3_3:77423706-77423725 | Msa0474520:intron | 30.0% |
| ! | TGTACTTTGATGATCAGGAA+TGG | + | chr3_3:77420295-77420314 | None:intergenic | 35.0% |
| ! | CTTTCTGTACTTTGATGATC+AGG | + | chr3_3:77420300-77420319 | None:intergenic | 35.0% |
| GAAGTCTAACTTAGAAAGGA+AGG | - | chr3_3:77420338-77420357 | Msa0474520:three_prime_UTR | 35.0% | |
| TCTAACTTAGAAAGGAAGGT+GGG | - | chr3_3:77420342-77420361 | Msa0474520:three_prime_UTR | 35.0% | |
| AAGGAATGAAATTGTACCAG+AGG | - | chr3_3:77420817-77420836 | Msa0474520:intron | 35.0% | |
| GAGTTTGAACAGAAGAATGA+TGG | - | chr3_3:77420839-77420858 | Msa0474520:intron | 35.0% | |
| ! | AGAAGATGATGATGATGATG+AGG | - | chr3_3:77420865-77420884 | Msa0474520:intron | 35.0% |
| TAGTCAGGTTATCCAAATTC+TGG | + | chr3_3:77421015-77421034 | None:intergenic | 35.0% | |
| !! | GTTTTAGCATGATTCATCAG+GGG | + | chr3_3:77421127-77421146 | None:intergenic | 35.0% |
| ! | GAAGCATTTGGTAAATGGAA+AGG | - | chr3_3:77421241-77421260 | Msa0474520:CDS | 35.0% |
| TAACAATCCTAGAACATTGC+TGG | - | chr3_3:77421450-77421469 | Msa0474520:intron | 35.0% | |
| ACTAAATCCAGCAATGTTCT+AGG | + | chr3_3:77421460-77421479 | None:intergenic | 35.0% | |
| ! | GTTTATTTAGTGGACAGGTA+TGG | - | chr3_3:77421501-77421520 | Msa0474520:intron | 35.0% |
| AAGGAACTAATAGAGAAGCT+TGG | - | chr3_3:77421683-77421702 | Msa0474520:intron | 35.0% | |
| ! | AGATACAATTTGTTTCTCCC+TGG | - | chr3_3:77421721-77421740 | Msa0474520:intron | 35.0% |
| TAACTGAAGAGAATGAACCT+TGG | + | chr3_3:77421813-77421832 | None:intergenic | 35.0% | |
| ATGCTTTACTTCCATCATTC+TGG | + | chr3_3:77421900-77421919 | None:intergenic | 35.0% | |
| CAAGACTCAAGTATGAAATG+AGG | - | chr3_3:77421966-77421985 | Msa0474520:intron | 35.0% | |
| GAAACATTCAAAAGCTCTTG+AGG | - | chr3_3:77422081-77422100 | Msa0474520:CDS | 35.0% | |
| ! | TGGACAATCAAGTTTGAGTT+AGG | - | chr3_3:77422289-77422308 | Msa0474520:intron | 35.0% |
| ! | CACACAAATCACATTTTTGC+AGG | + | chr3_3:77422442-77422461 | None:intergenic | 35.0% |
| TGCAGCATCTAAACATTTCA+TGG | + | chr3_3:77422536-77422555 | None:intergenic | 35.0% | |
| AGCAGAGTCTTAGAAAGATT+TGG | - | chr3_3:77422582-77422601 | Msa0474520:CDS | 35.0% | |
| AATTTCTCTATCATGTGTCC+TGG | - | chr3_3:77422692-77422711 | Msa0474520:intron | 35.0% | |
| ACATCTTCCATCAAGTAACA+GGG | + | chr3_3:77422909-77422928 | None:intergenic | 35.0% | |
| TACATCTTCCATCAAGTAAC+AGG | + | chr3_3:77422910-77422929 | None:intergenic | 35.0% | |
| TGAACAAGAACGATTCTTCA+AGG | - | chr3_3:77422930-77422949 | Msa0474520:CDS | 35.0% | |
| AAGAACGATTCTTCAAGGAA+CGG | - | chr3_3:77422935-77422954 | Msa0474520:CDS | 35.0% | |
| ! | CCTTTGCATTTCTTTTATCG+TGG | + | chr3_3:77422972-77422991 | None:intergenic | 35.0% |
| CCACGATAAAAGAAATGCAA+AGG | - | chr3_3:77422969-77422988 | Msa0474520:CDS | 35.0% | |
| ! | ACTAGCTTGTAATGTGGATA+GGG | + | chr3_3:77423145-77423164 | None:intergenic | 35.0% |
| ! | AAATGCACTAGCTTGTAATG+TGG | + | chr3_3:77423151-77423170 | None:intergenic | 35.0% |
| ! | TCACATGACACTAGTTTAGA+TGG | - | chr3_3:77423180-77423199 | Msa0474520:CDS | 35.0% |
| !! | ACTTTTTCTACTGGTGAGAT+GGG | + | chr3_3:77423581-77423600 | None:intergenic | 35.0% |
| AGGTGCATGTTTATAAACAC+AGG | - | chr3_3:77423633-77423652 | Msa0474520:intron | 35.0% | |
| ATGAATACCGCTGAAACATT+AGG | - | chr3_3:77423676-77423695 | Msa0474520:intron | 35.0% | |
| GTCTAACTTAGAAAGGAAGG+TGG | - | chr3_3:77420341-77420360 | Msa0474520:three_prime_UTR | 40.0% | |
| !! | CAAAGCTGACGAAGTTTTGT+TGG | - | chr3_3:77420418-77420437 | Msa0474520:three_prime_UTR | 40.0% |
| ACGTACCATATTGAAAGACG+AGG | - | chr3_3:77420442-77420461 | Msa0474520:three_prime_UTR | 40.0% | |
| CACATCCTCGTCTTTCAATA+TGG | + | chr3_3:77420450-77420469 | None:intergenic | 40.0% | |
| GGTCTCATATAACCAGCATT+TGG | + | chr3_3:77420677-77420696 | None:intergenic | 40.0% | |
| ATTGTATCCATATCCACCAG+TGG | + | chr3_3:77420732-77420751 | None:intergenic | 40.0% | |
| ACTGGAAATCAACTCATGCA+AGG | - | chr3_3:77420798-77420817 | Msa0474520:intron | 40.0% | |
| TTCTTCTGTTCAAACTCCTC+TGG | + | chr3_3:77420836-77420855 | None:intergenic | 40.0% | |
| ! | AGATGATGATGATGATGAGG+AGG | - | chr3_3:77420868-77420887 | Msa0474520:intron | 40.0% |
| TAAATGAACCAGAGAGACAG+TGG | - | chr3_3:77421044-77421063 | Msa0474520:intron | 40.0% | |
| AAAGGGTTCAAAAAGGGTGA+AGG | - | chr3_3:77421147-77421166 | Msa0474520:CDS | 40.0% | |
| AAAAAGGGTGAAGGTTCACA+GGG | - | chr3_3:77421156-77421175 | Msa0474520:CDS | 40.0% | |
| TTGATGAGGAATTGCGTAGA+AGG | - | chr3_3:77421194-77421213 | Msa0474520:CDS | 40.0% | |
| TGATGAGGAATTGCGTAGAA+GGG | - | chr3_3:77421195-77421214 | Msa0474520:CDS | 40.0% | |
| TGAAATTGTTTGGCCTCCAA+TGG | - | chr3_3:77421288-77421307 | Msa0474520:intron | 40.0% | |
| TTCTGAACCATAACCATTGG+AGG | + | chr3_3:77421304-77421323 | None:intergenic | 40.0% | |
| ! | GTGTTCTGAACCATAACCAT+TGG | + | chr3_3:77421307-77421326 | None:intergenic | 40.0% |
| ! | TACAATTTGTTTCTCCCTGG+TGG | - | chr3_3:77421724-77421743 | Msa0474520:intron | 40.0% |
| AGTTAACCAAGCCAGAATGA+TGG | - | chr3_3:77421886-77421905 | Msa0474520:intron | 40.0% | |
| ! | TTACTTCCATCATTCTGGCT+TGG | + | chr3_3:77421895-77421914 | None:intergenic | 40.0% |
| CCTCACTCATTTGTCGAATT+TGG | + | chr3_3:77422015-77422034 | None:intergenic | 40.0% | |
| CCAAATTCGACAAATGAGTG+AGG | - | chr3_3:77422012-77422031 | Msa0474520:CDS | 40.0% | |
| AAAGCTCTTGAGGAATCCTT+TGG | - | chr3_3:77422091-77422110 | Msa0474520:CDS | 40.0% | |
| ! | AGTTAGGATATGGTTCTGCT+TGG | - | chr3_3:77422305-77422324 | Msa0474520:intron | 40.0% |
| TCAGAGTGGAGGAGATTAAT+GGG | + | chr3_3:77422465-77422484 | None:intergenic | 40.0% | |
| ! | TACTTTGAAAGTCAGAGTGG+AGG | + | chr3_3:77422476-77422495 | None:intergenic | 40.0% |
| ! | GTCTACTTTGAAAGTCAGAG+TGG | + | chr3_3:77422479-77422498 | None:intergenic | 40.0% |
| GAAACCTATAAGGGAGAATG+TGG | + | chr3_3:77422821-77422840 | None:intergenic | 40.0% | |
| CCATCAAGTAACAGGGAAAA+TGG | + | chr3_3:77422902-77422921 | None:intergenic | 40.0% | |
| !! | CCATTTTCCCTGTTACTTGA+TGG | - | chr3_3:77422899-77422918 | Msa0474520:CDS | 40.0% |
| AAGGTGAAGAAGACAACTAC+TGG | - | chr3_3:77423030-77423049 | Msa0474520:CDS | 40.0% | |
| TAGGGAGGTCATTAGTCAAA+GGG | + | chr3_3:77423127-77423146 | None:intergenic | 40.0% | |
| ATAGGGAGGTCATTAGTCAA+AGG | + | chr3_3:77423128-77423147 | None:intergenic | 40.0% | |
| ! | CACTAGCTTGTAATGTGGAT+AGG | + | chr3_3:77423146-77423165 | None:intergenic | 40.0% |
| ! | CCTGGAGTTCGACAAATTTT+AGG | + | chr3_3:77423404-77423423 | None:intergenic | 40.0% |
| CCTAAAATTTGTCGAACTCC+AGG | - | chr3_3:77423401-77423420 | Msa0474520:CDS | 40.0% | |
| GATGGAGAAGAAGTTTGATG+AGG | - | chr3_3:77423527-77423546 | Msa0474520:CDS | 40.0% | |
| GAAGAAGTTTGATGAGGACT+TGG | - | chr3_3:77423533-77423552 | Msa0474520:CDS | 40.0% | |
| !! | GGAGTACTTTTCCATGAGTT+TGG | + | chr3_3:77423559-77423578 | None:intergenic | 40.0% |
| ! | CTTTTTCTACTGGTGAGATG+GGG | + | chr3_3:77423580-77423599 | None:intergenic | 40.0% |
| !! | GACTTTTTCTACTGGTGAGA+TGG | + | chr3_3:77423582-77423601 | None:intergenic | 40.0% |
| CACCAGTAGAAAAAGTCCAA+TGG | - | chr3_3:77423585-77423604 | Msa0474520:intron | 40.0% | |
| !! | GACCATTGGACTTTTTCTAC+TGG | + | chr3_3:77423590-77423609 | None:intergenic | 40.0% |
| GCATGTTTATAAACACAGGC+AGG | - | chr3_3:77423637-77423656 | Msa0474520:intron | 40.0% | |
| AGTTGCATACCCTTGTGTAT+GGG | - | chr3_3:77423812-77423831 | Msa0474520:CDS | 40.0% | |
| TTCCCTTCCATTACCTCAAA+AGG | - | chr3_3:77423940-77423959 | Msa0474520:intron | 40.0% | |
| TCCCTTCCATTACCTCAAAA+GGG | - | chr3_3:77423941-77423960 | Msa0474520:intron | 40.0% | |
| !!! | TCCCTTTTGAGGTAATGGAA+GGG | + | chr3_3:77423945-77423964 | None:intergenic | 40.0% |
| !!! | ATCCCTTTTGAGGTAATGGA+AGG | + | chr3_3:77423946-77423965 | None:intergenic | 40.0% |
| TGTAGAGGAGGAGGAATGAT+GGG | + | chr3_3:77420767-77420786 | None:intergenic | 45.0% | |
| ATCATTCCTCCTCCTCTACA+GGG | - | chr3_3:77420767-77420786 | Msa0474520:CDS | 45.0% | |
| ! | TGATGATGATGATGAGGAGG+AGG | - | chr3_3:77420871-77420890 | Msa0474520:intron | 45.0% |
| GTCAAAAGAGCCATGAGACA+CGG | - | chr3_3:77420960-77420979 | Msa0474520:intron | 45.0% | |
| AGACACGGAAGAAGAGCAAA+TGG | - | chr3_3:77420975-77420994 | Msa0474520:intron | 45.0% | |
| CTGTACCAATCAATAGCACC+AGG | + | chr3_3:77421094-77421113 | None:intergenic | 45.0% | |
| !! | GGTGCTATTGATTGGTACAG+AGG | - | chr3_3:77421094-77421113 | Msa0474520:intron | 45.0% |
| CAAAAAGGGTGAAGGTTCAC+AGG | - | chr3_3:77421155-77421174 | Msa0474520:CDS | 45.0% | |
| !! | GCTTGCTGTACTTCTTGATG+AGG | - | chr3_3:77421180-77421199 | Msa0474520:CDS | 45.0% |
| GATGAGGAATTGCGTAGAAG+GGG | - | chr3_3:77421196-77421215 | Msa0474520:CDS | 45.0% | |
| !! | CTGGGGAAGCATTTGGTAAA+TGG | - | chr3_3:77421236-77421255 | Msa0474520:CDS | 45.0% |
| TGTTTGGCCTCCAATGGTTA+TGG | - | chr3_3:77421294-77421313 | Msa0474520:intron | 45.0% | |
| ! | GTAAGAGCACGGCATTCATA+TGG | - | chr3_3:77421565-77421584 | Msa0474520:intron | 45.0% |
| ! | ATGTTTGAAGCCTCAGCTAG+TGG | - | chr3_3:77421619-77421638 | Msa0474520:intron | 45.0% |
| ! | GACAAGCATTTTGCTGAGCA+AGG | - | chr3_3:77421664-77421683 | Msa0474520:intron | 45.0% |
| TCGACAGCTCTTTGGATACA+TGG | - | chr3_3:77421750-77421769 | Msa0474520:intron | 45.0% | |
| !! | TGGCTTGGTTAACTTGCAAC+TGG | + | chr3_3:77421880-77421899 | None:intergenic | 45.0% |
| GTATGAAATGAGGTCCTACC+AGG | - | chr3_3:77421976-77421995 | Msa0474520:intron | 45.0% | |
| AATGAGGTCCTACCAGGAAA+TGG | - | chr3_3:77421982-77422001 | Msa0474520:intron | 45.0% | |
| ! | TTTGGTGCACTACCATTTCC+TGG | + | chr3_3:77421997-77422016 | None:intergenic | 45.0% |
| CTTCTCGGTCACTATACCAA+AGG | + | chr3_3:77422110-77422129 | None:intergenic | 45.0% | |
| CATTGTCTTTCGCAGCTTCT+CGG | + | chr3_3:77422125-77422144 | None:intergenic | 45.0% | |
| GTCAGAGTGGAGGAGATTAA+TGG | + | chr3_3:77422466-77422485 | None:intergenic | 45.0% | |
| CCTATAAGGGAGAATGTGGA+TGG | + | chr3_3:77422817-77422836 | None:intergenic | 45.0% | |
| CCATCCACATTCTCCCTTAT+AGG | - | chr3_3:77422814-77422833 | Msa0474520:intron | 45.0% | |
| CAAAGGAAGAGGATTTCGAG+AGG | - | chr3_3:77422986-77423005 | Msa0474520:CDS | 45.0% | |
| AGGGAGGTCATTAGTCAAAG+GGG | + | chr3_3:77423126-77423145 | None:intergenic | 45.0% | |
| AGCTTGTAATGTGGATAGGG+AGG | + | chr3_3:77423142-77423161 | None:intergenic | 45.0% | |
| TGATCTCTTTGGATGTAGGG+TGG | - | chr3_3:77423371-77423390 | Msa0474520:CDS | 45.0% | |
| CGAACTCCAGGACAAAGAAA+TGG | - | chr3_3:77423413-77423432 | Msa0474520:CDS | 45.0% | |
| AGCTCTCCATTTCTTTGTCC+TGG | + | chr3_3:77423422-77423441 | None:intergenic | 45.0% | |
| ! | GGAGAGCTTTGTCGAAGAAA+AGG | - | chr3_3:77423434-77423453 | Msa0474520:CDS | 45.0% |
| AGCAGCAATGCTCTCTTCAT+GGG | + | chr3_3:77423475-77423494 | None:intergenic | 45.0% | |
| TAGCAGCAATGCTCTCTTCA+TGG | + | chr3_3:77423476-77423495 | None:intergenic | 45.0% | |
| GCATTGCTGCTATGAAGAAG+AGG | - | chr3_3:77423484-77423503 | Msa0474520:CDS | 45.0% | |
| !! | TGCTATGAAGAAGAGGCACT+GGG | - | chr3_3:77423491-77423510 | Msa0474520:CDS | 45.0% |
| AGTCCAATGGTCTCTTTCAG+TGG | - | chr3_3:77423598-77423617 | Msa0474520:intron | 45.0% | |
| GTCCAATGGTCTCTTTCAGT+GGG | - | chr3_3:77423599-77423618 | Msa0474520:intron | 45.0% | |
| TCCAATGGTCTCTTTCAGTG+GGG | - | chr3_3:77423600-77423619 | Msa0474520:intron | 45.0% | |
| GAGTTGCATACCCTTGTGTA+TGG | - | chr3_3:77423811-77423830 | Msa0474520:CDS | 45.0% | |
| GTTGCATACCCTTGTGTATG+GGG | - | chr3_3:77423813-77423832 | Msa0474520:CDS | 45.0% | |
| CAATTGCACCCCATACACAA+GGG | + | chr3_3:77423824-77423843 | None:intergenic | 45.0% | |
| ! | GTCAGCTTTGTCATGCTGAG+AGG | + | chr3_3:77420408-77420427 | None:intergenic | 50.0% |
| GTGTGGAATAACAGTGGAGC+TGG | - | chr3_3:77420623-77420642 | Msa0474520:CDS | 50.0% | |
| TATATGAGACCCGCTGGTAG+AGG | - | chr3_3:77420686-77420705 | Msa0474520:CDS | 50.0% | |
| TATCCATATCCACCAGTGGC+TGG | + | chr3_3:77420728-77420747 | None:intergenic | 50.0% | |
| CTGTAGAGGAGGAGGAATGA+TGG | + | chr3_3:77420768-77420787 | None:intergenic | 50.0% | |
| CATCATTCCTCCTCCTCTAC+AGG | - | chr3_3:77420766-77420785 | Msa0474520:CDS | 50.0% | |
| TGCTCTTCTTCCGTGTCTCA+TGG | + | chr3_3:77420973-77420992 | None:intergenic | 50.0% | |
| !! | GTGGTCCTGGTGCTATTGAT+TGG | - | chr3_3:77421086-77421105 | Msa0474520:intron | 50.0% |
| TACCAAATGCTTCCCCAGCT+GGG | + | chr3_3:77421234-77421253 | None:intergenic | 50.0% | |
| TTACCAAATGCTTCCCCAGC+TGG | + | chr3_3:77421235-77421254 | None:intergenic | 50.0% | |
| CTTATGCGGCAGTAAGAGCA+CGG | - | chr3_3:77421554-77421573 | Msa0474520:intron | 50.0% | |
| TCATCCCTCGATGACCTTGA+GGG | + | chr3_3:77421591-77421610 | None:intergenic | 50.0% | |
| AGCCTCAGCTAGTGGTTATC+TGG | - | chr3_3:77421627-77421646 | Msa0474520:intron | 50.0% | |
| CTCCAGATAACCACTAGCTG+AGG | + | chr3_3:77421632-77421651 | None:intergenic | 50.0% | |
| CTCAGCTAGTGGTTATCTGG+AGG | - | chr3_3:77421630-77421649 | Msa0474520:intron | 50.0% | |
| TTATCTGGAGGCAGAACGTC+TGG | - | chr3_3:77421642-77421661 | Msa0474520:intron | 50.0% | |
| CATGGCAACTAAAGACGACC+TGG | - | chr3_3:77421768-77421787 | Msa0474520:intron | 50.0% | |
| AATGCCTGTTGAAAGCCTCC+AGG | + | chr3_3:77421789-77421808 | None:intergenic | 50.0% | |
| ! | GCTTTCAACAGGCATTGCCA+AGG | - | chr3_3:77421793-77421812 | Msa0474520:intron | 50.0% |
| GTGCACTACCATTTCCTGGT+AGG | + | chr3_3:77421993-77422012 | None:intergenic | 50.0% | |
| CGAGAAGCTGCGAAAGACAA+TGG | - | chr3_3:77422123-77422142 | Msa0474520:CDS | 50.0% | |
| GAAGCTGCGAAAGACAATGG+AGG | - | chr3_3:77422126-77422145 | Msa0474520:CDS | 50.0% | |
| TGGAGGAGAATCGCATTGTG+AGG | - | chr3_3:77422143-77422162 | Msa0474520:CDS | 50.0% | |
| AGGAGAATCGCATTGTGAGG+CGG | - | chr3_3:77422146-77422165 | Msa0474520:CDS | 50.0% | |
| TACTGGTCCTGCAAATGCAG+AGG | - | chr3_3:77423047-77423066 | Msa0474520:CDS | 50.0% | |
| CTGCAAATGCAGAGGAGGAA+CGG | - | chr3_3:77423055-77423074 | Msa0474520:CDS | 50.0% | |
| TCTCTTTGGATGTAGGGTGG+AGG | - | chr3_3:77423374-77423393 | Msa0474520:CDS | 50.0% | |
| CTCTTTGGATGTAGGGTGGA+GGG | - | chr3_3:77423375-77423394 | Msa0474520:CDS | 50.0% | |
| CAATGCTCTCTTCATGGGCT+TGG | + | chr3_3:77423470-77423489 | None:intergenic | 50.0% | |
| ! | CTGCTATGAAGAAGAGGCAC+TGG | - | chr3_3:77423490-77423509 | Msa0474520:CDS | 50.0% |
| !! | TATGAAGAAGAGGCACTGGG+AGG | - | chr3_3:77423494-77423513 | Msa0474520:CDS | 50.0% |
| TGAGGACTTGGCCAAACTCA+TGG | - | chr3_3:77423545-77423564 | Msa0474520:CDS | 50.0% | |
| CCAATGGTCTCTTTCAGTGG+GGG | - | chr3_3:77423601-77423620 | Msa0474520:intron | 50.0% | |
| CAATGGTCTCTTTCAGTGGG+GGG | - | chr3_3:77423602-77423621 | Msa0474520:intron | 50.0% | |
| !! | TTCAGTGGGGGGTATTACAC+AGG | - | chr3_3:77423613-77423632 | Msa0474520:intron | 50.0% |
| GTATTGCTCCTTGACACTCG+CGG | - | chr3_3:77423745-77423764 | Msa0474520:CDS | 50.0% | |
| CCAATTGCACCCCATACACA+AGG | + | chr3_3:77423825-77423844 | None:intergenic | 50.0% | |
| CCTTGTGTATGGGGTGCAAT+TGG | - | chr3_3:77423822-77423841 | Msa0474520:intron | 50.0% | |
| !!! | CGGCATCCCTTTTGAGGTAA+TGG | + | chr3_3:77423950-77423969 | None:intergenic | 50.0% |
| GTGGGCAGTTCCAACAGAGA+CGG | - | chr3_3:77420360-77420379 | Msa0474520:three_prime_UTR | 55.0% | |
| GCTTCAAGCTCCGTCTCTGT+TGG | + | chr3_3:77420373-77420392 | None:intergenic | 55.0% | |
| CAGGGCGTGTGGAATAACAG+TGG | - | chr3_3:77420617-77420636 | Msa0474520:CDS | 55.0% | |
| !! | CAGCATTTGGTGTCTGCCAG+GGG | + | chr3_3:77420664-77420683 | None:intergenic | 55.0% |
| !! | CCAGCATTTGGTGTCTGCCA+GGG | + | chr3_3:77420665-77420684 | None:intergenic | 55.0% |
| !! | ACCAGCATTTGGTGTCTGCC+AGG | + | chr3_3:77420666-77420685 | None:intergenic | 55.0% |
| GCTGGTTATATGAGACCCGC+TGG | - | chr3_3:77420680-77420699 | Msa0474520:CDS | 55.0% | |
| CTTCCATTGCCTCTACCAGC+GGG | + | chr3_3:77420698-77420717 | None:intergenic | 55.0% | |
| CCTTCCATTGCCTCTACCAG+CGG | + | chr3_3:77420699-77420718 | None:intergenic | 55.0% | |
| ! | ATATCCACCAGTGGCTGGCT+GGG | + | chr3_3:77420723-77420742 | None:intergenic | 55.0% |
| ATTCCTCCTCCTCTACAGGG+TGG | - | chr3_3:77420770-77420789 | Msa0474520:CDS | 55.0% | |
| GGAGGACGACTGTGATGATC+TGG | - | chr3_3:77420889-77420908 | Msa0474520:intron | 55.0% | |
| TGGCACTGTCCAGCTTGTCA+AGG | - | chr3_3:77421064-77421083 | Msa0474520:intron | 55.0% | |
| CACTGTCCAGCTTGTCAAGG+TGG | - | chr3_3:77421067-77421086 | Msa0474520:intron | 55.0% | |
| GCACTACAGTAGTCCCAGCT+GGG | - | chr3_3:77421218-77421237 | Msa0474520:CDS | 55.0% | |
| CACTACAGTAGTCCCAGCTG+GGG | - | chr3_3:77421219-77421238 | Msa0474520:CDS | 55.0% | |
| CGGCATTCATATGGCCCTCA+AGG | - | chr3_3:77421574-77421593 | Msa0474520:intron | 55.0% | |
| TATGGCCCTCAAGGTCATCG+AGG | - | chr3_3:77421583-77421602 | Msa0474520:intron | 55.0% | |
| ATGGCCCTCAAGGTCATCGA+GGG | - | chr3_3:77421584-77421603 | Msa0474520:intron | 55.0% | |
| CTCATCCCTCGATGACCTTG+AGG | + | chr3_3:77421592-77421611 | None:intergenic | 55.0% | |
| ! | AGAGCTGTCGATTGCCACCA+GGG | + | chr3_3:77421741-77421760 | None:intergenic | 55.0% |
| ! | AAGAGCTGTCGATTGCCACC+AGG | + | chr3_3:77421742-77421761 | None:intergenic | 55.0% |
| GGTGGCAATCGACAGCTCTT+TGG | - | chr3_3:77421742-77421761 | Msa0474520:intron | 55.0% | |
| GGCAACTAAAGACGACCTGG+AGG | - | chr3_3:77421771-77421790 | Msa0474520:intron | 55.0% | |
| ACGACCTGGAGGCTTTCAAC+AGG | - | chr3_3:77421782-77421801 | Msa0474520:intron | 55.0% | |
| GGATTTCGAGAGGATGCAGC+AGG | - | chr3_3:77422996-77423015 | Msa0474520:CDS | 55.0% | |
| TGGTCCTGCAAATGCAGAGG+AGG | - | chr3_3:77423050-77423069 | Msa0474520:CDS | 55.0% | |
| CGTTCCTCCTCTGCATTTGC+AGG | + | chr3_3:77423057-77423076 | None:intergenic | 55.0% | |
| CCCCCACTGAAAGAGACCAT+TGG | + | chr3_3:77423604-77423623 | None:intergenic | 55.0% | |
| TTGCAACACCGCGAGTGTCA+AGG | + | chr3_3:77423756-77423775 | None:intergenic | 55.0% | |
| !! | TTGACACTCGCGGTGTTGCA+AGG | - | chr3_3:77423755-77423774 | Msa0474520:CDS | 55.0% |
| TGGCTCAAAAGCAGGGCGTG+TGG | - | chr3_3:77420606-77420625 | Msa0474520:CDS | 60.0% | |
| AGTGGAGCTGGAAGAGCTGC+TGG | - | chr3_3:77420635-77420654 | Msa0474520:CDS | 60.0% | |
| GAAGAGCTGCTGGAAACCCC+TGG | - | chr3_3:77420645-77420664 | Msa0474520:CDS | 60.0% | |
| CCCTGGCAGACACCAAATGC+TGG | - | chr3_3:77420662-77420681 | Msa0474520:CDS | 60.0% | |
| AGACCCGCTGGTAGAGGCAA+TGG | - | chr3_3:77420692-77420711 | Msa0474520:CDS | 60.0% | |
| CCGCTGGTAGAGGCAATGGA+AGG | - | chr3_3:77420696-77420715 | Msa0474520:CDS | 60.0% | |
| ! | TATCCACCAGTGGCTGGCTG+GGG | + | chr3_3:77420722-77420741 | None:intergenic | 60.0% |
| CATATCCACCAGTGGCTGGC+TGG | + | chr3_3:77420724-77420743 | None:intergenic | 60.0% | |
| ! | CAGCCAGCCACTGGTGGATA+TGG | - | chr3_3:77420722-77420741 | Msa0474520:CDS | 60.0% |
| TTCCAGCCACCCTGTAGAGG+AGG | + | chr3_3:77420779-77420798 | None:intergenic | 60.0% | |
| CAGTTCCAGCCACCCTGTAG+AGG | + | chr3_3:77420782-77420801 | None:intergenic | 60.0% | |
| CTCTACAGGGTGGCTGGAAC+TGG | - | chr3_3:77420780-77420799 | Msa0474520:CDS | 60.0% | |
| ! | GGACAGTGCCACTGTCTCTC+TGG | + | chr3_3:77421055-77421074 | None:intergenic | 60.0% |
| CCAGGACCACCTTGACAAGC+TGG | + | chr3_3:77421076-77421095 | None:intergenic | 60.0% | |
| CCAGCTTGTCAAGGTGGTCC+TGG | - | chr3_3:77421073-77421092 | Msa0474520:intron | 60.0% | |
| GGCACTACAGTAGTCCCAGC+TGG | - | chr3_3:77421217-77421236 | Msa0474520:CDS | 60.0% | |
| !! | GTCCCAGCTGGGGAAGCATT+TGG | - | chr3_3:77421229-77421248 | Msa0474520:CDS | 60.0% |
| ! | GCAGCAGGAAGAGCGTGAGA+AGG | - | chr3_3:77423011-77423030 | Msa0474520:CDS | 60.0% |
| !! | GAAGAGGCACTGGGAGGAAG+AGG | - | chr3_3:77423500-77423519 | Msa0474520:CDS | 60.0% |
| CTGGGAGGAAGAGGTGGAGA+TGG | - | chr3_3:77423509-77423528 | Msa0474520:CDS | 60.0% | |
| CAGCCACCCTGTAGAGGAGG+AGG | + | chr3_3:77420776-77420795 | None:intergenic | 65.0% | |
| CTCCTCCTCTACAGGGTGGC+TGG | - | chr3_3:77420774-77420793 | Msa0474520:CDS | 65.0% | |
| !! | GAGGCACTGGGAGGAAGAGG+TGG | - | chr3_3:77423503-77423522 | Msa0474520:CDS | 65.0% |
| GGAAGGCCCCAGCCAGCCAC+TGG | - | chr3_3:77420713-77420732 | Msa0474520:CDS | 75.0% | |
| AGGCCCCAGCCAGCCACTGG+TGG | - | chr3_3:77420716-77420735 | Msa0474520:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 77420223 | 77423970 | 77420223 | ID=Msa0474520;Name=Msa0474520 |
| chr3_3 | mRNA | 77420223 | 77423970 | 77420223 | ID=Msa0474520-mRNA-1;Parent=Msa0474520;Name=Msa0474520-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.66|0.57|0.71|1|1|7|377|589 |
| chr3_3 | exon | 77420223 | 77420804 | 77420223 | ID=Msa0474520-mRNA-1:exon:20723;Parent=Msa0474520-mRNA-1 |
| chr3_3 | exon | 77421108 | 77421268 | 77421108 | ID=Msa0474520-mRNA-1:exon:20722;Parent=Msa0474520-mRNA-1 |
| chr3_3 | exon | 77421989 | 77422233 | 77421989 | ID=Msa0474520-mRNA-1:exon:20721;Parent=Msa0474520-mRNA-1 |
| chr3_3 | exon | 77422379 | 77422682 | 77422379 | ID=Msa0474520-mRNA-1:exon:20720;Parent=Msa0474520-mRNA-1 |
| chr3_3 | exon | 77422839 | 77423573 | 77422839 | ID=Msa0474520-mRNA-1:exon:20719;Parent=Msa0474520-mRNA-1 |
| chr3_3 | exon | 77423727 | 77423837 | 77423727 | ID=Msa0474520-mRNA-1:exon:20718;Parent=Msa0474520-mRNA-1 |
| chr3_3 | exon | 77423962 | 77423970 | 77423962 | ID=Msa0474520-mRNA-1:exon:20717;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77423962 | 77423970 | 77423962 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77423727 | 77423837 | 77423727 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77422839 | 77423573 | 77422839 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77422379 | 77422682 | 77422379 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77421989 | 77422233 | 77421989 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77421108 | 77421268 | 77421108 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | CDS | 77420600 | 77420804 | 77420600 | ID=Msa0474520-mRNA-1:cds;Parent=Msa0474520-mRNA-1 |
| chr3_3 | three_prime_UTR | 77420223 | 77420599 | 77420223 | ID=Msa0474520-mRNA-1:three_prime_utr;Parent=Msa0474520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
