Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095570 | XP_003621882.2 | 97.746 | 355 | 8 | 0 | 1 | 355 | 1 | 355 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095570 | sp|O80642|PGTB1_ARATH | 66.193 | 352 | 119 | 0 | 4 | 355 | 24 | 375 | 7.92e-165 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095570 | G7KXT5 | 97.746 | 355 | 8 | 0 | 1 | 355 | 1 | 355 | 0.0 | 722 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0644140 | Msa1095570 | 0.808072 | 3.706769e-50 | -8.615850e-47 |
| Msa0279510 | Msa1095570 | 0.814567 | 1.442385e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095570 | MtrunA17_Chr7g0223251 | 97.746 | 355 | 8 | 0 | 1 | 355 | 1 | 355 | 0.0 | 722 |
| Msa1095570 | MtrunA17_Chr8g0378251 | 30.449 | 312 | 177 | 7 | 33 | 341 | 21 | 295 | 7.17e-43 | 151 |
| Msa1095570 | MtrunA17_Chr1g0210041 | 31.090 | 312 | 175 | 8 | 33 | 341 | 21 | 295 | 2.03e-42 | 149 |
| Msa1095570 | MtrunA17_Chr6g0450801 | 34.420 | 276 | 138 | 12 | 15 | 285 | 47 | 284 | 2.26e-36 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095570 | AT2G39550.1 | 66.193 | 352 | 119 | 0 | 4 | 355 | 24 | 375 | 8.05e-166 | 468 |
| Msa1095570 | AT3G12070.2 | 30.938 | 320 | 180 | 8 | 26 | 341 | 17 | 299 | 1.77e-39 | 142 |
| Msa1095570 | AT3G12070.1 | 30.938 | 320 | 180 | 8 | 26 | 341 | 17 | 299 | 1.77e-39 | 142 |
| Msa1095570 | AT3G12070.3 | 30.938 | 320 | 180 | 8 | 26 | 341 | 17 | 299 | 1.77e-39 | 142 |
| Msa1095570 | AT5G12210.1 | 31.287 | 342 | 192 | 9 | 3 | 341 | 2 | 303 | 4.17e-39 | 141 |
| Msa1095570 | AT5G12210.2 | 31.287 | 342 | 191 | 9 | 3 | 341 | 2 | 302 | 7.09e-39 | 141 |
| Msa1095570 | AT5G40280.1 | 40.361 | 166 | 85 | 4 | 114 | 277 | 157 | 310 | 1.21e-30 | 122 |
| Msa1095570 | AT3G12070.4 | 31.727 | 249 | 130 | 8 | 26 | 271 | 17 | 228 | 2.85e-26 | 105 |
| Msa1095570 | AT5G40280.2 | 39.286 | 140 | 73 | 3 | 138 | 277 | 215 | 342 | 8.65e-25 | 105 |
Find 94 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATACATGTTATGCATTT+TGG | 0.132640 | 7_3:+18509792 | Msa1095570:CDS |
| GTTAGTTATTCTTGTTGTTT+TGG | 0.230779 | 7_3:-18505863 | None:intergenic |
| TTTGTTTCATGCTGGATAAC+TGG | 0.272962 | 7_3:+18507978 | Msa1095570:CDS |
| AGAAAGAAGCTGTTGCTAAT+TGG | 0.277647 | 7_3:+18506887 | Msa1095570:CDS |
| AGTTTCATGCCTATTCATAT+TGG | 0.283504 | 7_3:+18507817 | Msa1095570:intron |
| GCTGTTGGACTGGATCTTGC+AGG | 0.285545 | 7_3:+18509067 | Msa1095570:CDS |
| GGTAGTGTTCTTCTTTGTTT+TGG | 0.288849 | 7_3:-18505904 | None:intergenic |
| TTTGATACAGGACAATTCTA+TGG | 0.295366 | 7_3:+18507028 | Msa1095570:intron |
| GTTTCATGCCTATTCATATT+GGG | 0.299338 | 7_3:+18507818 | Msa1095570:intron |
| AAACAACAAGAATAACTAAC+TGG | 0.312873 | 7_3:+18505866 | Msa1095570:five_prime_UTR |
| TCTATGGATTTCATGGTTCC+AGG | 0.327277 | 7_3:+18507044 | Msa1095570:CDS |
| TAGTCTTATGATGGTGGGTT+TGG | 0.327392 | 7_3:+18508407 | Msa1095570:intron |
| GATCTATACCATTCCTACTA+TGG | 0.330458 | 7_3:+18510973 | Msa1095570:CDS |
| GGACAATTCTATGGATTTCA+TGG | 0.337885 | 7_3:+18507037 | Msa1095570:intron |
| GGTGGGTTTGGATTAGTTCC+TGG | 0.347855 | 7_3:+18508419 | Msa1095570:CDS |
| GAAAGAAGCTGTTGCTAATT+GGG | 0.348219 | 7_3:+18506888 | Msa1095570:CDS |
| TATTGCATCTCTCCGGCTAA+TGG | 0.348696 | 7_3:+18508983 | Msa1095570:CDS |
| ATCATTTGCATACCATTGTT+AGG | 0.356762 | 7_3:-18506949 | None:intergenic |
| CATGTATCAGTAGATTTGTT+AGG | 0.360086 | 7_3:-18509779 | None:intergenic |
| TGATGAAGCTGTAACTAATT+TGG | 0.362765 | 7_3:-18505928 | None:intergenic |
| TCTTGAGACTCATATGGATT+TGG | 0.369346 | 7_3:-18506226 | None:intergenic |
| ACCTTCCATCAGGTTGTTGA+AGG | 0.383835 | 7_3:-18507607 | None:intergenic |
| TATTGTTTCTAGTCTTATGA+TGG | 0.384399 | 7_3:+18508398 | Msa1095570:intron |
| TTGATTTCTTGAGACTCATA+TGG | 0.395755 | 7_3:-18506232 | None:intergenic |
| CTCAGAAGAAGCATCATCTA+TGG | 0.410056 | 7_3:+18506141 | Msa1095570:CDS |
| AGTTTCCTCCGGATGAGAAT+GGG | 0.410277 | 7_3:+18507074 | Msa1095570:CDS |
| TTGCCAAGTGACTGTTGTTA+TGG | 0.416969 | 7_3:-18507496 | None:intergenic |
| CAGTTTCCTCCGGATGAGAA+TGG | 0.421479 | 7_3:+18507073 | Msa1095570:CDS |
| ATTGCATCTCTCCGGCTAAT+GGG | 0.422020 | 7_3:+18508984 | Msa1095570:CDS |
| ATTACTAATACGGCTGCAAT+TGG | 0.426192 | 7_3:+18511057 | Msa1095570:CDS |
| CAGGACTTCTCAGTTTCCTC+CGG | 0.427646 | 7_3:+18507063 | Msa1095570:CDS |
| AAGTCACTTTGTTCTGAACT+TGG | 0.428277 | 7_3:+18511033 | Msa1095570:CDS |
| AGCTGCCATTTGTTTCATGC+TGG | 0.430142 | 7_3:+18507970 | Msa1095570:intron |
| ATTTGCCCTTGCTGTTGGAC+TGG | 0.433862 | 7_3:+18509057 | Msa1095570:CDS |
| TTATGGCAATCAAATGAGAT+TGG | 0.437523 | 7_3:-18511281 | None:intergenic |
| CTTAGGTTTGTATATTGTGC+AGG | 0.438655 | 7_3:+18507853 | Msa1095570:CDS |
| TCAAAAGCTTACCTTCCATC+AGG | 0.445129 | 7_3:-18507617 | None:intergenic |
| TGAACTTGGAATTACTAATA+CGG | 0.449842 | 7_3:+18511047 | Msa1095570:CDS |
| GGGACTGATGGTGGATTTCA+AGG | 0.450663 | 7_3:+18509752 | Msa1095570:CDS |
| GATAGATTTGCCCTTGCTGT+TGG | 0.450997 | 7_3:+18509052 | Msa1095570:CDS |
| ATTTGCAGCTTTCAGCCTGC+TGG | 0.451868 | 7_3:+18510996 | Msa1095570:CDS |
| CTTTCTTGCACATTGTATGA+AGG | 0.454286 | 7_3:+18511188 | Msa1095570:three_prime_UTR |
| TAGTAGGAATGGTATAGATC+TGG | 0.458355 | 7_3:-18510970 | None:intergenic |
| CTTGCCATATTGAAAATTGT+TGG | 0.461099 | 7_3:+18507533 | Msa1095570:CDS |
| AACAGAGGTACATTTGATAG+TGG | 0.468054 | 7_3:-18511225 | None:intergenic |
| TTGTTGTTCCACGTCGAACT+TGG | 0.470796 | 7_3:-18506921 | None:intergenic |
| GGATTATATATTAAATTGCC+AGG | 0.474815 | 7_3:+18508027 | Msa1095570:CDS |
| TTACTCACCCCATTCTCATC+CGG | 0.476025 | 7_3:-18507082 | None:intergenic |
| TGTTTCTAGTCTTATGATGG+TGG | 0.478812 | 7_3:+18508401 | Msa1095570:intron |
| GTTTCTAGTCTTATGATGGT+GGG | 0.483509 | 7_3:+18508402 | Msa1095570:intron |
| CGGAGGAAACTGAGAAGTCC+TGG | 0.491327 | 7_3:-18507062 | None:intergenic |
| GAAAGCTGCAAATCCATAGT+AGG | 0.503934 | 7_3:-18510986 | None:intergenic |
| CATAGATGATGCTTCTTCTG+AGG | 0.509624 | 7_3:-18506140 | None:intergenic |
| GTTATCCAGCATGAAACAAA+TGG | 0.512917 | 7_3:-18507975 | None:intergenic |
| CTGCAAATCCATAGTAGGAA+TGG | 0.513484 | 7_3:-18510981 | None:intergenic |
| TTTGCATTCCTGTCAATACA+AGG | 0.514622 | 7_3:+18509971 | Msa1095570:CDS |
| ATGAAGATCTTTGTCAATTG+TGG | 0.522149 | 7_3:-18506170 | None:intergenic |
| ATGCAGTACCTTGTATTGAC+AGG | 0.525241 | 7_3:-18509979 | None:intergenic |
| TATAGATCTGGAAAGTCTCC+AGG | 0.525733 | 7_3:-18510958 | None:intergenic |
| CATTCTCAACGCCCTCCACT+TGG | 0.535067 | 7_3:+18506294 | Msa1095570:CDS |
| TCAAGTCAGATTCTTCCAGC+AGG | 0.538998 | 7_3:-18511011 | None:intergenic |
| TCACCATAACAACAGTCACT+TGG | 0.539329 | 7_3:+18507493 | Msa1095570:CDS |
| CTTCAATGTATCCCATTAGC+CGG | 0.540539 | 7_3:-18508995 | None:intergenic |
| TTTCATGCCTATTCATATTG+GGG | 0.545673 | 7_3:+18507819 | Msa1095570:CDS |
| GGTGGTTTCAGCAAATTCCC+TGG | 0.547121 | 7_3:+18510940 | Msa1095570:CDS |
| ATTGCGCTATTGCATCTCTC+CGG | 0.561041 | 7_3:+18508976 | Msa1095570:CDS |
| CAGAGACAAGGGACTGATGG+TGG | 0.562051 | 7_3:+18509743 | Msa1095570:intron |
| TCACCATGAGATTCTGCACC+AGG | 0.576644 | 7_3:-18508437 | None:intergenic |
| TTACAGAGACAAGGGACTGA+TGG | 0.580990 | 7_3:+18509740 | Msa1095570:intron |
| TAACAAAGTAAGCGAGAGTG+AGG | 0.582191 | 7_3:-18506258 | None:intergenic |
| TTCATGCCTATTCATATTGG+GGG | 0.587007 | 7_3:+18507820 | Msa1095570:CDS |
| TTCATGCTGGATAACTGGAA+TGG | 0.587689 | 7_3:+18507983 | Msa1095570:CDS |
| TAGATATATATACCAAGTGG+AGG | 0.601781 | 7_3:-18506306 | None:intergenic |
| CAAGATCCAGTCCAACAGCA+AGG | 0.603548 | 7_3:-18509063 | None:intergenic |
| ACCTTCAACAACCTGATGGA+AGG | 0.605534 | 7_3:+18507606 | Msa1095570:CDS |
| CTCACCCCATTCTCATCCGG+AGG | 0.608050 | 7_3:-18507079 | None:intergenic |
| AAACTAGAGAGTAAGATGAT+CGG | 0.612019 | 7_3:-18505951 | None:intergenic |
| GTGTTCCTTTACAGAGACAA+GGG | 0.613844 | 7_3:+18509732 | Msa1095570:intron |
| AAGAACCTTCAACAACCTGA+TGG | 0.616037 | 7_3:+18507602 | Msa1095570:CDS |
| TGTGTTCCTTTACAGAGACA+AGG | 0.616841 | 7_3:+18509731 | Msa1095570:intron |
| GCTGGATAACTGGAATGGAA+TGG | 0.623582 | 7_3:+18507988 | Msa1095570:CDS |
| GCTTCTTCTGAGGAACTCAT+CGG | 0.624332 | 7_3:-18506130 | None:intergenic |
| AAGATCCAGTCCAACAGCAA+GGG | 0.629447 | 7_3:-18509062 | None:intergenic |
| GTTCCTGGTGCAGAATCTCA+TGG | 0.630608 | 7_3:+18508434 | Msa1095570:CDS |
| TTGTCATTCCAAGTTCGACG+TGG | 0.634418 | 7_3:+18506913 | Msa1095570:CDS |
| TGAAGCTGTAACTAATTTGG+TGG | 0.638370 | 7_3:-18505925 | None:intergenic |
| ACAACAAATGATCCTAACAA+TGG | 0.642147 | 7_3:+18506937 | Msa1095570:CDS |
| ATAGATCTGGAAAGTCTCCA+GGG | 0.644913 | 7_3:-18510957 | None:intergenic |
| GTTTCCTCCGGATGAGAATG+GGG | 0.646472 | 7_3:+18507075 | Msa1095570:CDS |
| AACAACAAGAATAACTAACT+GGG | 0.646989 | 7_3:+18505867 | Msa1095570:five_prime_UTR |
| AGATATATATACCAAGTGGA+GGG | 0.647392 | 7_3:-18506305 | None:intergenic |
| TAACTGGAATGGAATGGACA+AGG | 0.652833 | 7_3:+18507994 | Msa1095570:CDS |
| GTCGACAATAAAGCTCTACG+TGG | 0.714176 | 7_3:+18509945 | Msa1095570:CDS |
| AAATTTGAAACAGATAACAG+AGG | 0.752890 | 7_3:-18511240 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCAATAATAATAACTA+GGG | - | chr7_3:18506074-18506093 | None:intergenic | 10.0% |
| !!! | GTTGATTTTTTTTTTTTTTT+TGG | + | chr7_3:18507456-18507475 | Msa1095570:intron | 10.0% |
| !! | ATTATGTAATATATAAGTGA+TGG | - | chr7_3:18506021-18506040 | None:intergenic | 15.0% |
| !! | CAATATCAATAATAATAACT+AGG | - | chr7_3:18506075-18506094 | None:intergenic | 15.0% |
| !! | TTAAAATATAAGTTTAAAGG+TGG | - | chr7_3:18506658-18506677 | None:intergenic | 15.0% |
| !!! | TAAAATATTGTATTTGGAAT+TGG | + | chr7_3:18507102-18507121 | Msa1095570:intron | 15.0% |
| !!! | GATAATATTTGTTTTTAGTT+TGG | + | chr7_3:18507135-18507154 | Msa1095570:intron | 15.0% |
| !! | TATCAAAACAATTTATACTT+AGG | - | chr7_3:18507286-18507305 | None:intergenic | 15.0% |
| !! | AAAAAAAAATCAACATAAAC+AGG | - | chr7_3:18507450-18507469 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTGGTTTTTGA+AGG | + | chr7_3:18507466-18507485 | Msa1095570:intron | 15.0% |
| !! | ATAAGCATAAAAAAAAAGTA+TGG | - | chr7_3:18507657-18507676 | None:intergenic | 15.0% |
| !! | GAAAGATAGTTAATATTATT+AGG | + | chr7_3:18508275-18508294 | Msa1095570:intron | 15.0% |
| !!! | AATAATTTTTTTACTCTCAT+TGG | + | chr7_3:18509186-18509205 | Msa1095570:intron | 15.0% |
| !! | AATGAGTTAATAAATAGTTA+AGG | - | chr7_3:18509245-18509264 | None:intergenic | 15.0% |
| !! | TTAATTAATAATTTAGTGCT+TGG | + | chr7_3:18509503-18509522 | Msa1095570:intron | 15.0% |
| !! | TATTATATCACAAGAATTAT+AGG | + | chr7_3:18510068-18510087 | Msa1095570:intron | 15.0% |
| !!! | TTTATCTTTCTTTTATATGA+AGG | - | chr7_3:18510160-18510179 | None:intergenic | 15.0% |
| !! | AAAAATATTCAATATCATTG+AGG | - | chr7_3:18510873-18510892 | None:intergenic | 15.0% |
| !!! | GATATTGAATATTTTTTTGT+TGG | + | chr7_3:18510877-18510896 | Msa1095570:intron | 15.0% |
| !! | AATTAATGTTCAAACAAAAA+AGG | - | chr7_3:18511142-18511161 | None:intergenic | 15.0% |
| !!! | AATAATAATAACTAGGGTTT+TGG | - | chr7_3:18506068-18506087 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr7_3:18506343-18506362 | None:intergenic | 20.0% |
| !! | TTATACAATGAAATTTACAC+AGG | + | chr7_3:18506682-18506701 | Msa1095570:intron | 20.0% |
| !!! | AATGTAGTTTTTAAGAGAAT+TGG | - | chr7_3:18506763-18506782 | None:intergenic | 20.0% |
| !!! | TGTTTGTTTTTTGTGATTTA+AGG | + | chr7_3:18506861-18506880 | Msa1095570:intron | 20.0% |
| !!! | AATTTTGCGATTTATTGTTA+TGG | + | chr7_3:18507714-18507733 | Msa1095570:intron | 20.0% |
| !! | TTAGAGAAAAATACATGAAA+TGG | + | chr7_3:18507876-18507895 | Msa1095570:intron | 20.0% |
| !! | GGTTAATTAATAGATAATCA+TGG | + | chr7_3:18507910-18507929 | Msa1095570:intron | 20.0% |
| !! | AAAAAAAAAAACAACACTAG+AGG | - | chr7_3:18508068-18508087 | None:intergenic | 20.0% |
| !! | AAAAAAATATTGTCATGTAG+AGG | + | chr7_3:18508166-18508185 | Msa1095570:intron | 20.0% |
| !! | TAGTTAATATTATTAGGTCA+TGG | + | chr7_3:18508281-18508300 | Msa1095570:intron | 20.0% |
| !! | GAAACAATAAAAGAAAAAGA+AGG | - | chr7_3:18508387-18508406 | None:intergenic | 20.0% |
| !!! | CAATGTTTTAAAAGTCAAAT+TGG | + | chr7_3:18508543-18508562 | Msa1095570:intron | 20.0% |
| !! | AATAAATAGTTAAGGTCTTA+AGG | - | chr7_3:18509237-18509256 | None:intergenic | 20.0% |
| !! | TACAAAAGTGACAATTAAAA+AGG | + | chr7_3:18509374-18509393 | Msa1095570:intron | 20.0% |
| !! | AAAGACAATTCATATGTTAA+AGG | - | chr7_3:18509687-18509706 | None:intergenic | 20.0% |
| !! | TGTAACATAGAAATTGATTA+TGG | - | chr7_3:18509834-18509853 | None:intergenic | 20.0% |
| !! | AAGAATTATAGGAAATCAAA+GGG | + | chr7_3:18510079-18510098 | Msa1095570:intron | 20.0% |
| !! | AATAAATATACATGTTGTGA+AGG | - | chr7_3:18510373-18510392 | None:intergenic | 20.0% |
| !! | TCACAACATGTATATTTATT+TGG | + | chr7_3:18510373-18510392 | Msa1095570:intron | 20.0% |
| !!! | TGGCATTTATTTTTCATTTA+TGG | - | chr7_3:18510541-18510560 | None:intergenic | 20.0% |
| ! | AAACAACAAGAATAACTAAC+TGG | + | chr7_3:18505866-18505885 | Msa1095570:five_prime_UTR | 25.0% |
| ! | AACAACAAGAATAACTAACT+GGG | + | chr7_3:18505867-18505886 | Msa1095570:five_prime_UTR | 25.0% |
| ! | AAGTAGATATATATACCAAG+TGG | - | chr7_3:18506312-18506331 | None:intergenic | 25.0% |
| !!! | CATGCTTTTTATTAGAGTAA+AGG | + | chr7_3:18506481-18506500 | Msa1095570:intron | 25.0% |
| ! | CTGTATCAAATTCTTCAAAT+GGG | - | chr7_3:18507018-18507037 | None:intergenic | 25.0% |
| ! | GGTGAGTAAAATATTGTATT+TGG | + | chr7_3:18507096-18507115 | Msa1095570:intron | 25.0% |
| ! | AAGAATCATAAAGTTGTGTT+TGG | + | chr7_3:18507160-18507179 | Msa1095570:intron | 25.0% |
| ! | AAGCTATCATAGAGAAATTA+TGG | + | chr7_3:18507305-18507324 | Msa1095570:intron | 25.0% |
| !! | TAAGAACTTGTGAAACTTTT+TGG | - | chr7_3:18507383-18507402 | None:intergenic | 25.0% |
| !! | AACAATTTTCAATATGGCAA+GGG | - | chr7_3:18507534-18507553 | None:intergenic | 25.0% |
| !! | GTAACCAACAATTTTCAATA+TGG | - | chr7_3:18507540-18507559 | None:intergenic | 25.0% |
| ! | CTCTTAATGATATGTTTAAG+TGG | + | chr7_3:18507758-18507777 | Msa1095570:intron | 25.0% |
| ! | GGATTATATATTAAATTGCC+AGG | + | chr7_3:18508027-18508046 | Msa1095570:CDS | 25.0% |
| !!! | TATTGTTTCTAGTCTTATGA+TGG | + | chr7_3:18508398-18508417 | Msa1095570:intron | 25.0% |
| !!! | TTTTAAAAAGCGAACCAAAA+TGG | - | chr7_3:18508703-18508722 | None:intergenic | 25.0% |
| ! | CCATAAAAAAGAGAAAATTC+AGG | - | chr7_3:18508753-18508772 | None:intergenic | 25.0% |
| !!! | CCTGAATTTTCTCTTTTTTA+TGG | + | chr7_3:18508750-18508769 | Msa1095570:intron | 25.0% |
| !!! | CATGTTTACAATGTTTTAGT+TGG | + | chr7_3:18508805-18508824 | Msa1095570:intron | 25.0% |
| !!! | TTTACAATGTTTTAGTTGGT+AGG | + | chr7_3:18508809-18508828 | Msa1095570:intron | 25.0% |
| ! | TTGGTAGGAGATTAAAATAT+GGG | + | chr7_3:18508824-18508843 | Msa1095570:intron | 25.0% |
| ! | TAAAGTGAACAAATGTAGTA+CGG | - | chr7_3:18509130-18509149 | None:intergenic | 25.0% |
| ! | ATTGCAAAGAGAAAAATAGA+TGG | - | chr7_3:18509268-18509287 | None:intergenic | 25.0% |
| ! | CTCTTTGCAATAAATAGTTT+AGG | + | chr7_3:18509277-18509296 | Msa1095570:intron | 25.0% |
| !! | GATTGTAAATATAAGCATTG+TGG | + | chr7_3:18509414-18509433 | Msa1095570:intron | 25.0% |
| !!! | CATTTTAAAGCAGCTTAAAA+TGG | - | chr7_3:18509579-18509598 | None:intergenic | 25.0% |
| !!! | TGGTTTTTTCATAATTGACA+CGG | - | chr7_3:18509631-18509650 | None:intergenic | 25.0% |
| ! | AAAATGTATGATTCCTGTTA+CGG | - | chr7_3:18509880-18509899 | None:intergenic | 25.0% |
| !! | ACAATGTGTTACAGATTTTA+AGG | + | chr7_3:18510022-18510041 | Msa1095570:intron | 25.0% |
| !! | CAATGTGTTACAGATTTTAA+GGG | + | chr7_3:18510023-18510042 | Msa1095570:intron | 25.0% |
| !! | AATGTGTTACAGATTTTAAG+GGG | + | chr7_3:18510024-18510043 | Msa1095570:intron | 25.0% |
| ! | CAAGAATTATAGGAAATCAA+AGG | + | chr7_3:18510078-18510097 | Msa1095570:intron | 25.0% |
| ! | GGACAAAATTATAACTTGAA+GGG | - | chr7_3:18510352-18510371 | None:intergenic | 25.0% |
| ! | AGGACAAAATTATAACTTGA+AGG | - | chr7_3:18510353-18510372 | None:intergenic | 25.0% |
| !!! | TTATTTTGTTTAGATCGACT+CGG | + | chr7_3:18510482-18510501 | Msa1095570:intron | 25.0% |
| ! | AAAAATTAAGTAGGTCAACT+TGG | - | chr7_3:18510561-18510580 | None:intergenic | 25.0% |
| !! | AAGTTGACCTACTTAATTTT+TGG | + | chr7_3:18510560-18510579 | Msa1095570:intron | 25.0% |
| ! | AATTTCGCCAAAAATTAAGT+AGG | - | chr7_3:18510570-18510589 | None:intergenic | 25.0% |
| !!! | CTTAATTTTTGGCGAAATTA+AGG | + | chr7_3:18510571-18510590 | Msa1095570:intron | 25.0% |
| !!! | AACTCATTTGTTTTTCAGTA+TGG | + | chr7_3:18510919-18510938 | Msa1095570:intron | 25.0% |
| ! | TGAACTTGGAATTACTAATA+CGG | + | chr7_3:18511047-18511066 | Msa1095570:CDS | 25.0% |
| !! | AAATTTGAAACAGATAACAG+AGG | - | chr7_3:18511243-18511262 | None:intergenic | 25.0% |
| TGATGAAGCTGTAACTAATT+TGG | - | chr7_3:18505931-18505950 | None:intergenic | 30.0% | |
| AAACTAGAGAGTAAGATGAT+CGG | - | chr7_3:18505954-18505973 | None:intergenic | 30.0% | |
| TATTGAAATTGTGCATTAGC+AGG | + | chr7_3:18506090-18506109 | Msa1095570:intron | 30.0% | |
| ATGAAGATCTTTGTCAATTG+TGG | - | chr7_3:18506173-18506192 | None:intergenic | 30.0% | |
| TTGATTTCTTGAGACTCATA+TGG | - | chr7_3:18506235-18506254 | None:intergenic | 30.0% | |
| AGATATATATACCAAGTGGA+GGG | - | chr7_3:18506308-18506327 | None:intergenic | 30.0% | |
| TAGATATATATACCAAGTGG+AGG | - | chr7_3:18506309-18506328 | None:intergenic | 30.0% | |
| ! | GCTTTTTATTAGAGTAAAGG+TGG | + | chr7_3:18506484-18506503 | Msa1095570:intron | 30.0% |
| ! | ACAATTCTGAGTGTTTTCAT+TGG | + | chr7_3:18506597-18506616 | Msa1095570:intron | 30.0% |
| TTCAAAAAGAATTAGTGTCG+CGG | - | chr7_3:18506732-18506751 | None:intergenic | 30.0% | |
| ! | CGACACTAATTCTTTTTGAA+TGG | + | chr7_3:18506732-18506751 | Msa1095570:intron | 30.0% |
| AACTACATTCATAGACCTAA+AGG | + | chr7_3:18506774-18506793 | Msa1095570:intron | 30.0% | |
| ACAACAAATGATCCTAACAA+TGG | + | chr7_3:18506937-18506956 | Msa1095570:CDS | 30.0% | |
| ATCATTTGCATACCATTGTT+AGG | - | chr7_3:18506952-18506971 | None:intergenic | 30.0% | |
| CCTGTATCAAATTCTTCAAA+TGG | - | chr7_3:18507019-18507038 | None:intergenic | 30.0% | |
| CCATTTGAAGAATTTGATAC+AGG | + | chr7_3:18507016-18507035 | Msa1095570:intron | 30.0% | |
| TTTGATACAGGACAATTCTA+TGG | + | chr7_3:18507028-18507047 | Msa1095570:intron | 30.0% | |
| ACTTATTTGAACTTACCTAC+TGG | - | chr7_3:18507408-18507427 | None:intergenic | 30.0% | |
| AAAATCAACATAAACAGGTC+AGG | - | chr7_3:18507445-18507464 | None:intergenic | 30.0% | |
| ! | CAACAATTTTCAATATGGCA+AGG | - | chr7_3:18507535-18507554 | None:intergenic | 30.0% |
| CTTGCCATATTGAAAATTGT+TGG | + | chr7_3:18507533-18507552 | Msa1095570:CDS | 30.0% | |
| !!! | GAAGGTAAGCTTTTGAAATT+TGG | + | chr7_3:18507624-18507643 | Msa1095570:intron | 30.0% |
| !!! | AGTAGTGGATTTTACTGATA+TGG | - | chr7_3:18507687-18507706 | None:intergenic | 30.0% |
| GCAAAATTGAAAAGTAGTAG+TGG | - | chr7_3:18507702-18507721 | None:intergenic | 30.0% | |
| AGTTTCATGCCTATTCATAT+TGG | + | chr7_3:18507817-18507836 | Msa1095570:intron | 30.0% | |
| GTTTCATGCCTATTCATATT+GGG | + | chr7_3:18507818-18507837 | Msa1095570:intron | 30.0% | |
| TTTCATGCCTATTCATATTG+GGG | + | chr7_3:18507819-18507838 | Msa1095570:CDS | 30.0% | |
| CATGAAATGGAAGTTCTATT+TGG | + | chr7_3:18507889-18507908 | Msa1095570:intron | 30.0% | |
| ACCTGAACAAATCATTATCT+AGG | + | chr7_3:18508143-18508162 | Msa1095570:intron | 30.0% | |
| !! | TCCTAGATAATGATTTGTTC+AGG | - | chr7_3:18508147-18508166 | None:intergenic | 30.0% |
| CAAACAAATCTATCATGTGA+TGG | - | chr7_3:18508782-18508801 | None:intergenic | 30.0% | |
| ! | GTTGGTAGGAGATTAAAATA+TGG | + | chr7_3:18508823-18508842 | Msa1095570:intron | 30.0% |
| ! | ACATGTACACACATTTTGAA+AGG | + | chr7_3:18508863-18508882 | Msa1095570:intron | 30.0% |
| !!! | ATTACTTGTTTTAGTGTCAC+AGG | + | chr7_3:18508942-18508961 | Msa1095570:intron | 30.0% |
| ACATGTAGATAACCTACAAT+AGG | - | chr7_3:18509154-18509173 | None:intergenic | 30.0% | |
| AAAGTCATCAACCAAATGAA+GGG | - | chr7_3:18509477-18509496 | None:intergenic | 30.0% | |
| AAAAGTCATCAACCAAATGA+AGG | - | chr7_3:18509478-18509497 | None:intergenic | 30.0% | |
| ! | AGCTTAAAATGGCACATTTT+TGG | - | chr7_3:18509568-18509587 | None:intergenic | 30.0% |
| !! | TAAGCTGCTTTAAAATGCAA+TGG | + | chr7_3:18509582-18509601 | Msa1095570:intron | 30.0% |
| ! | CATGTATCAGTAGATTTGTT+AGG | - | chr7_3:18509782-18509801 | None:intergenic | 30.0% |
| ! | CTGATACATGTTATGCATTT+TGG | + | chr7_3:18509792-18509811 | Msa1095570:CDS | 30.0% |
| ! | GTAACAGGAATCATACATTT+TGG | + | chr7_3:18509879-18509898 | Msa1095570:intron | 30.0% |
| !! | ATCATACATTTTGGTAGGAT+TGG | + | chr7_3:18509888-18509907 | Msa1095570:intron | 30.0% |
| TTTATATGAAGGAAATGCAC+TGG | - | chr7_3:18510149-18510168 | None:intergenic | 30.0% | |
| CATGATCCTTGTAAATATGT+GGG | - | chr7_3:18510292-18510311 | None:intergenic | 30.0% | |
| TCATGATCCTTGTAAATATG+TGG | - | chr7_3:18510293-18510312 | None:intergenic | 30.0% | |
| TCAGAAAGTTACTATGTGTT+TGG | + | chr7_3:18510325-18510344 | Msa1095570:intron | 30.0% | |
| CAGAAAGTTACTATGTGTTT+GGG | + | chr7_3:18510326-18510345 | Msa1095570:intron | 30.0% | |
| ATTATCAAACAAACTCAGCA+GGG | - | chr7_3:18510448-18510467 | None:intergenic | 30.0% | |
| ! | ATTAAGGCTTGAATTTTACC+TGG | + | chr7_3:18510587-18510606 | Msa1095570:intron | 30.0% |
| !!! | AAAGAAAATCTGGTTTTTCC+AGG | - | chr7_3:18510608-18510627 | None:intergenic | 30.0% |
| ACGAAAAAGGAAAGAAAATC+TGG | - | chr7_3:18510618-18510637 | None:intergenic | 30.0% | |
| !! | AGATTTTCTTTCCTTTTTCG+TGG | + | chr7_3:18510617-18510636 | Msa1095570:intron | 30.0% |
| !! | GATTTTCTTTCCTTTTTCGT+GGG | + | chr7_3:18510618-18510637 | Msa1095570:intron | 30.0% |
| TTCATGTGTGTATTACTGAA+AGG | - | chr7_3:18510770-18510789 | None:intergenic | 30.0% | |
| TTTCAGTAATACACACATGA+AGG | + | chr7_3:18510769-18510788 | Msa1095570:intron | 30.0% | |
| TTCAGTAATACACACATGAA+GGG | + | chr7_3:18510770-18510789 | Msa1095570:intron | 30.0% | |
| ! | TTTTCTGATATCAGTATCTG+TGG | + | chr7_3:18510811-18510830 | Msa1095570:intron | 30.0% |
| TTTCTGATATCAGTATCTGT+GGG | + | chr7_3:18510812-18510831 | Msa1095570:intron | 30.0% | |
| ! | TTGGCTCATTGAACTAATTT+TGG | + | chr7_3:18510896-18510915 | Msa1095570:intron | 30.0% |
| !! | TCATTTGTTTTTCAGTATGG+TGG | + | chr7_3:18510922-18510941 | Msa1095570:intron | 30.0% |
| !! | GGTAGTGTTCTTCTTTGTTT+TGG | - | chr7_3:18505907-18505926 | None:intergenic | 35.0% |
| TGAAGCTGTAACTAATTTGG+TGG | - | chr7_3:18505928-18505947 | None:intergenic | 35.0% | |
| !!! | TCTTACTCTCTAGTTTTCTC+AGG | + | chr7_3:18505958-18505977 | Msa1095570:five_prime_UTR | 35.0% |
| TCTTGAGACTCATATGGATT+TGG | - | chr7_3:18506229-18506248 | None:intergenic | 35.0% | |
| TCAGTACAGAGTTGTTTGAA+GGG | - | chr7_3:18506518-18506537 | None:intergenic | 35.0% | |
| AGAAAGAAGCTGTTGCTAAT+TGG | + | chr7_3:18506887-18506906 | Msa1095570:CDS | 35.0% | |
| GAAAGAAGCTGTTGCTAATT+GGG | + | chr7_3:18506888-18506907 | Msa1095570:CDS | 35.0% | |
| GGACAATTCTATGGATTTCA+TGG | + | chr7_3:18507037-18507056 | Msa1095570:intron | 35.0% | |
| TTCATGCCTATTCATATTGG+GGG | + | chr7_3:18507820-18507839 | Msa1095570:CDS | 35.0% | |
| CTTAGGTTTGTATATTGTGC+AGG | + | chr7_3:18507853-18507872 | Msa1095570:CDS | 35.0% | |
| GTTATCCAGCATGAAACAAA+TGG | - | chr7_3:18507978-18507997 | None:intergenic | 35.0% | |
| TTTGTTTCATGCTGGATAAC+TGG | + | chr7_3:18507978-18507997 | Msa1095570:CDS | 35.0% | |
| AATGGACAAGGAAAAAGTCA+AGG | + | chr7_3:18508006-18508025 | Msa1095570:CDS | 35.0% | |
| ! | CCTCTAGTGTTGTTAAATAG+CGG | + | chr7_3:18508105-18508124 | Msa1095570:intron | 35.0% |
| TTGTCATGTAGAGGTTATAG+CGG | + | chr7_3:18508175-18508194 | Msa1095570:intron | 35.0% | |
| !! | CGATTTTTGTTTGACAACAG+TGG | + | chr7_3:18508247-18508266 | Msa1095570:intron | 35.0% |
| !! | TGTTTCTAGTCTTATGATGG+TGG | + | chr7_3:18508401-18508420 | Msa1095570:intron | 35.0% |
| !! | GTTTCTAGTCTTATGATGGT+GGG | + | chr7_3:18508402-18508421 | Msa1095570:intron | 35.0% |
| CTAGTTTGAGCAGTTTAAAG+AGG | - | chr7_3:18508605-18508624 | None:intergenic | 35.0% | |
| CTCTTTAAACTGCTCAAACT+AGG | + | chr7_3:18508603-18508622 | Msa1095570:intron | 35.0% | |
| AACCAAAATGGATGTCCAAA+TGG | - | chr7_3:18508691-18508710 | None:intergenic | 35.0% | |
| TGTTCACTTTAGCCTATTGT+AGG | + | chr7_3:18509139-18509158 | Msa1095570:intron | 35.0% | |
| ATTTGTGAATGCCCTTCATT+TGG | + | chr7_3:18509463-18509482 | Msa1095570:intron | 35.0% | |
| ! | CTTTAGCCAATTATCGATTG+TGG | + | chr7_3:18509531-18509550 | Msa1095570:intron | 35.0% |
| ! | CAATTATCGATTGTGGATGA+CGG | + | chr7_3:18509538-18509557 | Msa1095570:intron | 35.0% |
| TGTCAAATATCGACCATGTA+CGG | - | chr7_3:18509658-18509677 | None:intergenic | 35.0% | |
| !! | CAGGAATCATACATTTTGGT+AGG | + | chr7_3:18509883-18509902 | Msa1095570:intron | 35.0% |
| !! | ATACATTTTGGTAGGATTGG+AGG | + | chr7_3:18509891-18509910 | Msa1095570:intron | 35.0% |
| TTTGCATTCCTGTCAATACA+AGG | + | chr7_3:18509971-18509990 | Msa1095570:CDS | 35.0% | |
| CAAAGTGAGTTCGTTGTAAA+TGG | - | chr7_3:18510247-18510266 | None:intergenic | 35.0% | |
| CATTATCAAACAAACTCAGC+AGG | - | chr7_3:18510449-18510468 | None:intergenic | 35.0% | |
| !!! | CACATTTTTTCCCACGAAAA+AGG | - | chr7_3:18510631-18510650 | None:intergenic | 35.0% |
| !! | CTTTTTCGTGGGAAAAAATG+TGG | + | chr7_3:18510629-18510648 | Msa1095570:intron | 35.0% |
| TCAGTAATACACACATGAAG+GGG | + | chr7_3:18510771-18510790 | Msa1095570:intron | 35.0% | |
| TAGTAGGAATGGTATAGATC+TGG | - | chr7_3:18510973-18510992 | None:intergenic | 35.0% | |
| GATCTATACCATTCCTACTA+TGG | + | chr7_3:18510973-18510992 | Msa1095570:CDS | 35.0% | |
| ! | AAGTCACTTTGTTCTGAACT+TGG | + | chr7_3:18511033-18511052 | Msa1095570:CDS | 35.0% |
| ATTACTAATACGGCTGCAAT+TGG | + | chr7_3:18511057-18511076 | Msa1095570:CDS | 35.0% | |
| CTTTCTTGCACATTGTATGA+AGG | + | chr7_3:18511188-18511207 | Msa1095570:three_prime_UTR | 35.0% | |
| ! | AACAGAGGTACATTTGATAG+TGG | - | chr7_3:18511228-18511247 | None:intergenic | 35.0% |
| CATAGATGATGCTTCTTCTG+AGG | - | chr7_3:18506143-18506162 | None:intergenic | 40.0% | |
| !! | CTCAGAAGAAGCATCATCTA+TGG | + | chr7_3:18506141-18506160 | Msa1095570:CDS | 40.0% |
| TAACAAAGTAAGCGAGAGTG+AGG | - | chr7_3:18506261-18506280 | None:intergenic | 40.0% | |
| GATTAGACGTCTCCTGTTAT+CGG | - | chr7_3:18506413-18506432 | None:intergenic | 40.0% | |
| TACAGAGTTGTTTGAAGGGA+TGG | - | chr7_3:18506514-18506533 | None:intergenic | 40.0% | |
| GTCAGTACAGAGTTGTTTGA+AGG | - | chr7_3:18506519-18506538 | None:intergenic | 40.0% | |
| TCTATGGATTTCATGGTTCC+AGG | + | chr7_3:18507044-18507063 | Msa1095570:CDS | 40.0% | |
| TCACAAGTTCTTATGCCAGT+AGG | + | chr7_3:18507390-18507409 | Msa1095570:intron | 40.0% | |
| TCACCATAACAACAGTCACT+TGG | + | chr7_3:18507493-18507512 | Msa1095570:CDS | 40.0% | |
| TTGCCAAGTGACTGTTGTTA+TGG | - | chr7_3:18507499-18507518 | None:intergenic | 40.0% | |
| AAGAACCTTCAACAACCTGA+TGG | + | chr7_3:18507602-18507621 | Msa1095570:CDS | 40.0% | |
| TCAAAAGCTTACCTTCCATC+AGG | - | chr7_3:18507620-18507639 | None:intergenic | 40.0% | |
| GTTTCTCCCCCAATATGAAT+AGG | - | chr7_3:18507829-18507848 | None:intergenic | 40.0% | |
| TTCATGCTGGATAACTGGAA+TGG | + | chr7_3:18507983-18508002 | Msa1095570:CDS | 40.0% | |
| TAACTGGAATGGAATGGACA+AGG | + | chr7_3:18507994-18508013 | Msa1095570:CDS | 40.0% | |
| AGGTACTATTTGCACAAACC+TGG | - | chr7_3:18508048-18508067 | None:intergenic | 40.0% | |
| CCGCTATTTAACAACACTAG+AGG | - | chr7_3:18508108-18508127 | None:intergenic | 40.0% | |
| AAATAGCGGTTATAGCGTAG+TGG | + | chr7_3:18508119-18508138 | Msa1095570:intron | 40.0% | |
| TTGTTTGACAACAGTGGTGA+TGG | + | chr7_3:18508253-18508272 | Msa1095570:intron | 40.0% | |
| ! | AGGTCATGGCTGTACTATTT+TGG | + | chr7_3:18508295-18508314 | Msa1095570:intron | 40.0% |
| !! | TAGTCTTATGATGGTGGGTT+TGG | + | chr7_3:18508407-18508426 | Msa1095570:intron | 40.0% |
| GTGATTCCATACTGTGAGAA+GGG | + | chr7_3:18508490-18508509 | Msa1095570:intron | 40.0% | |
| !! | TTACGGTTCGGTTATTTGAG+CGG | - | chr7_3:18508646-18508665 | None:intergenic | 40.0% |
| ! | AGCCATTTGGACATCCATTT+TGG | + | chr7_3:18508686-18508705 | Msa1095570:intron | 40.0% |
| !!! | ACTTGTTTTAGTGTCACAGG+TGG | + | chr7_3:18508945-18508964 | Msa1095570:intron | 40.0% |
| CTTCAATGTATCCCATTAGC+CGG | - | chr7_3:18508998-18509017 | None:intergenic | 40.0% | |
| CGTCATCCACAATCGATAAT+TGG | - | chr7_3:18509540-18509559 | None:intergenic | 40.0% | |
| ! | TTGACACGGCTAATTTGTGA+AGG | - | chr7_3:18509617-18509636 | None:intergenic | 40.0% |
| TGTGTTCCTTTACAGAGACA+AGG | + | chr7_3:18509731-18509750 | Msa1095570:intron | 40.0% | |
| GTGTTCCTTTACAGAGACAA+GGG | + | chr7_3:18509732-18509751 | Msa1095570:intron | 40.0% | |
| !! | GCATTTTGGTAAGTACGCTA+TGG | + | chr7_3:18509806-18509825 | Msa1095570:intron | 40.0% |
| TAAGTTGTCAAAGCCGTAAC+AGG | + | chr7_3:18509864-18509883 | Msa1095570:intron | 40.0% | |
| !!! | GGAGGCGTTTTAAGAATTCT+CGG | + | chr7_3:18509909-18509928 | Msa1095570:CDS | 40.0% |
| !!! | GAGGCGTTTTAAGAATTCTC+GGG | + | chr7_3:18509910-18509929 | Msa1095570:CDS | 40.0% |
| !!! | AGGCGTTTTAAGAATTCTCG+GGG | + | chr7_3:18509911-18509930 | Msa1095570:CDS | 40.0% |
| ! | ATGCAGTACCTTGTATTGAC+AGG | - | chr7_3:18509982-18510001 | None:intergenic | 40.0% |
| GAGTTCGTTGTAAATGGAAG+AGG | - | chr7_3:18510241-18510260 | None:intergenic | 40.0% | |
| TTCGTGGGAAAAAATGTGGA+AGG | + | chr7_3:18510633-18510652 | Msa1095570:intron | 40.0% | |
| !!! | TGTCATTTTACACCTGTCAG+AGG | + | chr7_3:18510687-18510706 | Msa1095570:intron | 40.0% |
| TAAAATGCCATCCCAGTGAT+AGG | - | chr7_3:18510730-18510749 | None:intergenic | 40.0% | |
| CAGTAATACACACATGAAGG+GGG | + | chr7_3:18510772-18510791 | Msa1095570:intron | 40.0% | |
| TGATATCAGTATCTGTGGGA+TGG | + | chr7_3:18510816-18510835 | Msa1095570:intron | 40.0% | |
| ATAGATCTGGAAAGTCTCCA+GGG | - | chr7_3:18510960-18510979 | None:intergenic | 40.0% | |
| TATAGATCTGGAAAGTCTCC+AGG | - | chr7_3:18510961-18510980 | None:intergenic | 40.0% | |
| CTGCAAATCCATAGTAGGAA+TGG | - | chr7_3:18510984-18511003 | None:intergenic | 40.0% | |
| GAAAGCTGCAAATCCATAGT+AGG | - | chr7_3:18510989-18511008 | None:intergenic | 40.0% | |
| ! | GCTTCTTCTGAGGAACTCAT+CGG | - | chr7_3:18506133-18506152 | None:intergenic | 45.0% |
| AACAGGAGACGTCTAATCTG+AGG | + | chr7_3:18506415-18506434 | Msa1095570:intron | 45.0% | |
| !! | TTAGTGTCGCGGTTTGTTGT+TGG | - | chr7_3:18506721-18506740 | None:intergenic | 45.0% |
| GTAGCAATGCTGTGTCCTTT+AGG | - | chr7_3:18506792-18506811 | None:intergenic | 45.0% | |
| TTGTCATTCCAAGTTCGACG+TGG | + | chr7_3:18506913-18506932 | Msa1095570:CDS | 45.0% | |
| ! | TTGTTGTTCCACGTCGAACT+TGG | - | chr7_3:18506924-18506943 | None:intergenic | 45.0% |
| AGTTTCCTCCGGATGAGAAT+GGG | + | chr7_3:18507074-18507093 | Msa1095570:CDS | 45.0% | |
| TTACTCACCCCATTCTCATC+CGG | - | chr7_3:18507085-18507104 | None:intergenic | 45.0% | |
| ACCTTCAACAACCTGATGGA+AGG | + | chr7_3:18507606-18507625 | Msa1095570:CDS | 45.0% | |
| ! | ACCTTCCATCAGGTTGTTGA+AGG | - | chr7_3:18507610-18507629 | None:intergenic | 45.0% |
| TTGGGGGAGAAACAGATCTT+AGG | + | chr7_3:18507836-18507855 | Msa1095570:CDS | 45.0% | |
| ! | AGCTGCCATTTGTTTCATGC+TGG | + | chr7_3:18507970-18507989 | Msa1095570:intron | 45.0% |
| GCTGGATAACTGGAATGGAA+TGG | + | chr7_3:18507988-18508007 | Msa1095570:CDS | 45.0% | |
| CGTGATTCCATACTGTGAGA+AGG | + | chr7_3:18508489-18508508 | Msa1095570:intron | 45.0% | |
| CAATAGCCCTTCTCACAGTA+TGG | - | chr7_3:18508499-18508518 | None:intergenic | 45.0% | |
| TTATTTGAGCGGTTCGACTG+TGG | - | chr7_3:18508635-18508654 | None:intergenic | 45.0% | |
| CAAATGGCTGAACCGTTAAC+CGG | - | chr7_3:18508675-18508694 | None:intergenic | 45.0% | |
| ATTGCGCTATTGCATCTCTC+CGG | + | chr7_3:18508976-18508995 | Msa1095570:CDS | 45.0% | |
| TATTGCATCTCTCCGGCTAA+TGG | + | chr7_3:18508983-18509002 | Msa1095570:CDS | 45.0% | |
| ATTGCATCTCTCCGGCTAAT+GGG | + | chr7_3:18508984-18509003 | Msa1095570:CDS | 45.0% | |
| ! | GATAGATTTGCCCTTGCTGT+TGG | + | chr7_3:18509052-18509071 | Msa1095570:CDS | 45.0% |
| AAGATCCAGTCCAACAGCAA+GGG | - | chr7_3:18509065-18509084 | None:intergenic | 45.0% | |
| ! | GGCTAATTTGTGAAGGATGG+CGG | - | chr7_3:18509610-18509629 | None:intergenic | 45.0% |
| ! | CACGGCTAATTTGTGAAGGA+TGG | - | chr7_3:18509613-18509632 | None:intergenic | 45.0% |
| AAAAAACCAGCCACCGTACA+TGG | + | chr7_3:18509642-18509661 | Msa1095570:intron | 45.0% | |
| CAAATATCGACCATGTACGG+TGG | - | chr7_3:18509655-18509674 | None:intergenic | 45.0% | |
| TCAGTCCCTTGTCTCTGTAA+AGG | - | chr7_3:18509740-18509759 | None:intergenic | 45.0% | |
| TTACAGAGACAAGGGACTGA+TGG | + | chr7_3:18509740-18509759 | Msa1095570:intron | 45.0% | |
| !!! | GGCGTTTTAAGAATTCTCGG+GGG | + | chr7_3:18509912-18509931 | Msa1095570:CDS | 45.0% |
| GTCGACAATAAAGCTCTACG+TGG | + | chr7_3:18509945-18509964 | Msa1095570:CDS | 45.0% | |
| CCTTGTAAATATGTGGGCAC+TGG | - | chr7_3:18510286-18510305 | None:intergenic | 45.0% | |
| CCAGTGCCCACATATTTACA+AGG | + | chr7_3:18510283-18510302 | Msa1095570:intron | 45.0% | |
| GAGTTCAAATCTCCTCTGAC+AGG | - | chr7_3:18510702-18510721 | None:intergenic | 45.0% | |
| TGAACTCAGTCTCCTATCAC+TGG | + | chr7_3:18510715-18510734 | Msa1095570:intron | 45.0% | |
| GAACTCAGTCTCCTATCACT+GGG | + | chr7_3:18510716-18510735 | Msa1095570:intron | 45.0% | |
| TCAAGTCAGATTCTTCCAGC+AGG | - | chr7_3:18511014-18511033 | None:intergenic | 45.0% | |
| !!! | AATTTAAAATATAAGTTTAA+AGG | - | chr7_3:18506661-18506680 | None:intergenic | 5.0% |
| CACGACACATGTCCGATAAC+AGG | + | chr7_3:18506398-18506417 | Msa1095570:intron | 50.0% | |
| CAGGACTTCTCAGTTTCCTC+CGG | + | chr7_3:18507063-18507082 | Msa1095570:CDS | 50.0% | |
| CAGTTTCCTCCGGATGAGAA+TGG | + | chr7_3:18507073-18507092 | Msa1095570:CDS | 50.0% | |
| GTTTCCTCCGGATGAGAATG+GGG | + | chr7_3:18507075-18507094 | Msa1095570:CDS | 50.0% | |
| !! | GGTGGGTTTGGATTAGTTCC+TGG | + | chr7_3:18508419-18508438 | Msa1095570:CDS | 50.0% |
| GTTCCTGGTGCAGAATCTCA+TGG | + | chr7_3:18508434-18508453 | Msa1095570:CDS | 50.0% | |
| TCACCATGAGATTCTGCACC+AGG | - | chr7_3:18508440-18508459 | None:intergenic | 50.0% | |
| AACCGAACCGTAAACAGTGC+CGG | + | chr7_3:18508653-18508672 | Msa1095570:intron | 50.0% | |
| AACCGGCACTGTTTACGGTT+CGG | - | chr7_3:18508658-18508677 | None:intergenic | 50.0% | |
| CCGTTAACCGGCACTGTTTA+CGG | - | chr7_3:18508663-18508682 | None:intergenic | 50.0% | |
| !! | CCGTAAACAGTGCCGGTTAA+CGG | + | chr7_3:18508660-18508679 | Msa1095570:intron | 50.0% |
| CGGTTAACGGTTCAGCCATT+TGG | + | chr7_3:18508673-18508692 | Msa1095570:intron | 50.0% | |
| !! | ATTTGCCCTTGCTGTTGGAC+TGG | + | chr7_3:18509057-18509076 | Msa1095570:CDS | 50.0% |
| CAAGATCCAGTCCAACAGCA+AGG | - | chr7_3:18509066-18509085 | None:intergenic | 50.0% | |
| !! | GGGACTGATGGTGGATTTCA+AGG | + | chr7_3:18509752-18509771 | Msa1095570:CDS | 50.0% |
| CGGACGATAGAGAAACTCGT+TGG | + | chr7_3:18510502-18510521 | Msa1095570:intron | 50.0% | |
| TCAGTCTCCTATCACTGGGA+TGG | + | chr7_3:18510720-18510739 | Msa1095570:intron | 50.0% | |
| GGTGGTTTCAGCAAATTCCC+TGG | + | chr7_3:18510940-18510959 | Msa1095570:CDS | 50.0% | |
| ATTTGCAGCTTTCAGCCTGC+TGG | + | chr7_3:18510996-18511015 | Msa1095570:CDS | 50.0% | |
| CATTCTCAACGCCCTCCACT+TGG | + | chr7_3:18506294-18506313 | Msa1095570:CDS | 55.0% | |
| CGGAGGAAACTGAGAAGTCC+TGG | - | chr7_3:18507065-18507084 | None:intergenic | 55.0% | |
| CGCGCGCACAGATATGTTCA+TGG | - | chr7_3:18508332-18508351 | None:intergenic | 55.0% | |
| ! | GCTGTTGGACTGGATCTTGC+AGG | + | chr7_3:18509067-18509086 | Msa1095570:CDS | 55.0% |
| TATCGACCATGTACGGTGGC+TGG | - | chr7_3:18509651-18509670 | None:intergenic | 55.0% | |
| CAGAGACAAGGGACTGATGG+TGG | + | chr7_3:18509743-18509762 | Msa1095570:intron | 55.0% | |
| CTCACCCCATTCTCATCCGG+AGG | - | chr7_3:18507082-18507101 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 18505864 | 18511288 | 18505864 | ID=Msa1095570;Name=Msa1095570 |
| chr7_3 | mRNA | 18505864 | 18511288 | 18505864 | ID=Msa1095570-mRNA-1;Parent=Msa1095570;Name=Msa1095570-mRNA-1;_AED=0.12;_eAED=0.12;_QI=137|1|1|1|0.90|0.83|12|202|355 |
| chr7_3 | exon | 18505864 | 18505979 | 18505864 | ID=Msa1095570-mRNA-1:exon:4006;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18506112 | 18506315 | 18506112 | ID=Msa1095570-mRNA-1:exon:4007;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18506883 | 18506958 | 18506883 | ID=Msa1095570-mRNA-1:exon:4008;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18507038 | 18507096 | 18507038 | ID=Msa1095570-mRNA-1:exon:4009;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18507488 | 18507627 | 18507488 | ID=Msa1095570-mRNA-1:exon:4010;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18507819 | 18507874 | 18507819 | ID=Msa1095570-mRNA-1:exon:4011;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18507972 | 18508048 | 18507972 | ID=Msa1095570-mRNA-1:exon:4012;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18508410 | 18508455 | 18508410 | ID=Msa1095570-mRNA-1:exon:4013;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18508964 | 18509088 | 18508964 | ID=Msa1095570-mRNA-1:exon:4014;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18509746 | 18509813 | 18509746 | ID=Msa1095570-mRNA-1:exon:4015;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18509905 | 18509992 | 18509905 | ID=Msa1095570-mRNA-1:exon:4016;Parent=Msa1095570-mRNA-1 |
| chr7_3 | exon | 18510937 | 18511288 | 18510937 | ID=Msa1095570-mRNA-1:exon:4017;Parent=Msa1095570-mRNA-1 |
| chr7_3 | five_prime_UTR | 18505864 | 18505979 | 18505864 | ID=Msa1095570-mRNA-1:five_prime_utr;Parent=Msa1095570-mRNA-1 |
| chr7_3 | five_prime_UTR | 18506112 | 18506132 | 18506112 | ID=Msa1095570-mRNA-1:five_prime_utr;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18506133 | 18506315 | 18506133 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18506883 | 18506958 | 18506883 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18507038 | 18507096 | 18507038 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18507488 | 18507627 | 18507488 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18507819 | 18507874 | 18507819 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18507972 | 18508048 | 18507972 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18508410 | 18508455 | 18508410 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18508964 | 18509088 | 18508964 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18509746 | 18509813 | 18509746 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18509905 | 18509992 | 18509905 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | CDS | 18510937 | 18511086 | 18510937 | ID=Msa1095570-mRNA-1:cds;Parent=Msa1095570-mRNA-1 |
| chr7_3 | three_prime_UTR | 18511087 | 18511288 | 18511087 | ID=Msa1095570-mRNA-1:three_prime_utr;Parent=Msa1095570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
