Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096180 | XP_003621754.2 | 76.549 | 597 | 14 | 4 | 1 | 471 | 1 | 597 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096180 | sp|Q9FY99|G6PD2_ARATH | 62.991 | 535 | 70 | 6 | 60 | 468 | 63 | 595 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096180 | G7KUS5 | 76.549 | 597 | 14 | 4 | 1 | 471 | 1 | 597 | 0.0 | 895 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0179720 | Msa1096180 | -0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa1010820 | Msa1096180 | 0.920739 | 8.739016e-88 | -8.615850e-47 |
| Msa1052380 | Msa1096180 | 0.885135 | 1.055371e-71 | -8.615850e-47 |
| Msa0318600 | Msa1096180 | 0.816165 | 6.365988e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096180 | MtrunA17_Chr7g0222441 | 76.549 | 597 | 14 | 4 | 1 | 471 | 1 | 597 | 0.0 | 895 |
| Msa1096180 | MtrunA17_Chr8g0341321 | 56.306 | 563 | 110 | 6 | 35 | 468 | 26 | 581 | 0.0 | 589 |
| Msa1096180 | MtrunA17_Chr7g0271531 | 36.949 | 590 | 226 | 12 | 6 | 462 | 22 | 598 | 2.77e-114 | 348 |
| Msa1096180 | MtrunA17_Chr8g0356781 | 70.721 | 222 | 39 | 1 | 271 | 466 | 1 | 222 | 4.15e-111 | 327 |
| Msa1096180 | MtrunA17_Chr7g0228611 | 38.272 | 486 | 150 | 10 | 107 | 457 | 29 | 499 | 5.83e-93 | 291 |
| Msa1096180 | MtrunA17_Chr6g0458971 | 36.420 | 486 | 159 | 11 | 107 | 457 | 32 | 502 | 6.93e-85 | 270 |
| Msa1096180 | MtrunA17_Chr8g0358431 | 79.195 | 149 | 19 | 1 | 187 | 323 | 57 | 205 | 4.51e-78 | 242 |
| Msa1096180 | MtrunA17_Chr8g0358411 | 81.915 | 94 | 17 | 0 | 373 | 466 | 1 | 94 | 4.97e-50 | 165 |
| Msa1096180 | MtrunA17_Chr8g0356771 | 87.500 | 80 | 10 | 0 | 188 | 267 | 72 | 151 | 2.85e-44 | 153 |
| Msa1096180 | MtrunA17_Chr8g0356701 | 62.037 | 108 | 26 | 2 | 248 | 340 | 1 | 108 | 8.62e-37 | 131 |
| Msa1096180 | MtrunA17_Chr4g0044781 | 70.000 | 60 | 18 | 0 | 327 | 386 | 20 | 79 | 8.06e-24 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096180 | AT5G13110.1 | 62.991 | 535 | 70 | 6 | 60 | 468 | 63 | 595 | 0.0 | 645 |
| Msa1096180 | AT1G24280.1 | 60.862 | 557 | 85 | 7 | 37 | 468 | 50 | 598 | 0.0 | 624 |
| Msa1096180 | AT5G35790.1 | 58.498 | 506 | 83 | 5 | 86 | 466 | 71 | 574 | 0.0 | 571 |
| Msa1096180 | AT1G09420.1 | 36.634 | 606 | 219 | 16 | 11 | 464 | 32 | 624 | 8.31e-112 | 343 |
| Msa1096180 | AT1G09420.2 | 35.714 | 616 | 221 | 16 | 11 | 464 | 32 | 634 | 4.72e-109 | 337 |
| Msa1096180 | AT5G40760.2 | 38.320 | 488 | 152 | 11 | 103 | 457 | 28 | 499 | 4.15e-92 | 289 |
| Msa1096180 | AT5G40760.1 | 38.320 | 488 | 152 | 11 | 103 | 457 | 28 | 499 | 4.15e-92 | 289 |
| Msa1096180 | AT3G27300.1 | 47.869 | 305 | 110 | 5 | 187 | 457 | 211 | 500 | 7.10e-85 | 270 |
| Msa1096180 | AT3G27300.1 | 62.264 | 53 | 19 | 1 | 107 | 158 | 31 | 83 | 6.31e-12 | 68.2 |
| Msa1096180 | AT3G27300.3 | 47.869 | 305 | 110 | 5 | 187 | 457 | 211 | 500 | 7.10e-85 | 270 |
| Msa1096180 | AT3G27300.3 | 62.264 | 53 | 19 | 1 | 107 | 158 | 31 | 83 | 6.31e-12 | 68.2 |
| Msa1096180 | AT3G27300.2 | 47.869 | 305 | 110 | 5 | 187 | 457 | 211 | 500 | 7.10e-85 | 270 |
| Msa1096180 | AT3G27300.2 | 62.264 | 53 | 19 | 1 | 107 | 158 | 31 | 83 | 6.31e-12 | 68.2 |
| Msa1096180 | AT3G27300.5 | 47.869 | 305 | 110 | 5 | 187 | 457 | 265 | 554 | 3.06e-84 | 270 |
| Msa1096180 | AT3G27300.5 | 62.264 | 53 | 19 | 1 | 107 | 158 | 85 | 137 | 6.59e-12 | 68.2 |
| Msa1096180 | AT3G27300.4 | 47.869 | 305 | 110 | 5 | 187 | 457 | 282 | 571 | 4.83e-84 | 270 |
| Msa1096180 | AT3G27300.4 | 62.264 | 53 | 19 | 1 | 107 | 158 | 102 | 154 | 7.97e-12 | 67.8 |
Find 125 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGTGTGGTTCTTATAT+TGG | 0.193945 | 7_3:-20250531 | None:intergenic |
| TTGGTTTGGTGGAGGGAATT+GGG | 0.206956 | 7_3:+20252191 | Msa1096180:three_prime_UTR |
| AATCTGTACAATCGGAATTT+TGG | 0.208150 | 7_3:+20251035 | Msa1096180:CDS |
| TTGATATTCTCAGAAGATTT+TGG | 0.217136 | 7_3:+20249920 | Msa1096180:CDS |
| ACAGCATCTATGAATATATT+AGG | 0.222301 | 7_3:-20249289 | None:intergenic |
| TTTGGTTTGGTGGAGGGAAT+TGG | 0.223654 | 7_3:+20252190 | Msa1096180:three_prime_UTR |
| TGTAGGTACTTTGACAATTA+TGG | 0.250023 | 7_3:+20250043 | Msa1096180:intron |
| GGCTTGTCCCTTTCCCTTGT+TGG | 0.276119 | 7_3:-20244572 | None:intergenic |
| CCATTACTCAATCACTATTA+TGG | 0.287622 | 7_3:+20244724 | Msa1096180:exon |
| TGGTTTGGTGGAGGGAATTG+GGG | 0.307845 | 7_3:+20252192 | Msa1096180:three_prime_UTR |
| AACGACAATGAGTTGAATAA+AGG | 0.329442 | 7_3:-20244751 | None:intergenic |
| TTTCCCTTGTTGGGTGTTGA+AGG | 0.354938 | 7_3:-20244562 | None:intergenic |
| GGGCAGCCGCGGCAAATGTC+GGG | 0.355148 | 7_3:-20250612 | None:intergenic |
| GCTTGTCCCTTTCCCTTGTT+GGG | 0.362096 | 7_3:-20244571 | None:intergenic |
| TCGATTTGTGGTTTCTTGTT+TGG | 0.371868 | 7_3:+20252039 | Msa1096180:three_prime_UTR |
| ATAACTATTGTTGGAGCCTC+TGG | 0.378722 | 7_3:+20246550 | Msa1096180:CDS |
| GATAAAACCGACAATAATTC+AGG | 0.379602 | 7_3:-20246466 | None:intergenic |
| CGAGTATGGCATAGTAATAT+TGG | 0.385946 | 7_3:+20252079 | Msa1096180:three_prime_UTR |
| ACCCCAGAGTACTATCCTTA+TGG | 0.387489 | 7_3:+20251876 | Msa1096180:CDS |
| TCAACACAATTTGTTACAAC+AGG | 0.388413 | 7_3:+20244977 | Msa1096180:CDS |
| TTCAAATAAATACCTTCATC+CGG | 0.391157 | 7_3:-20251104 | None:intergenic |
| CTAACTCACATGTCGATTTG+TGG | 0.400770 | 7_3:+20252027 | Msa1096180:three_prime_UTR |
| TACAGGATCGATCACTATCT+TGG | 0.401089 | 7_3:+20249806 | Msa1096180:intron |
| ATCTTGAAATTGTATGACTT+TGG | 0.401663 | 7_3:+20252278 | Msa1096180:three_prime_UTR |
| CTATGAGGGTTGTCTGCCTA+AGG | 0.408589 | 7_3:+20246618 | Msa1096180:CDS |
| TGATTGAGTAATGGAGGAAA+AGG | 0.420049 | 7_3:-20244715 | None:intergenic |
| TGGCAGCATTTCACCATTTG+TGG | 0.426179 | 7_3:+20246736 | Msa1096180:intron |
| GTTGCAACCGCTTGCCACTA+TGG | 0.429986 | 7_3:-20246444 | None:intergenic |
| TTGCTTCTTGATGCAATTGA+AGG | 0.439881 | 7_3:+20251762 | Msa1096180:CDS |
| TTTGGTGGAGGGAATTGGGG+TGG | 0.440632 | 7_3:+20252195 | Msa1096180:three_prime_UTR |
| TCCTTATGGTAGTCGTGGTC+CGG | 0.442639 | 7_3:+20251890 | Msa1096180:CDS |
| AGCAACCTCTCATAAGCATC+TGG | 0.454571 | 7_3:-20251744 | None:intergenic |
| ACTGTTAGTATAACTATTGT+TGG | 0.462654 | 7_3:+20246541 | Msa1096180:CDS |
| TGCCGGGCAATCTGTACAAT+CGG | 0.462688 | 7_3:+20251027 | Msa1096180:CDS |
| GTCTTCAACTTTAGATTCCA+TGG | 0.463512 | 7_3:-20246491 | None:intergenic |
| GTCGGGGTTAAGCTGCCCTT+TGG | 0.467588 | 7_3:-20250595 | None:intergenic |
| GATTGAGTAATGGAGGAAAA+GGG | 0.472412 | 7_3:-20244714 | None:intergenic |
| AGTTGAAGACGGTGTTGAAA+AGG | 0.473134 | 7_3:+20246504 | Msa1096180:CDS |
| TGATGCAGAACTGAGAAATA+TGG | 0.475269 | 7_3:+20246780 | Msa1096180:CDS |
| GAGGAATTGAAAGATAAAAC+AGG | 0.478809 | 7_3:-20249267 | None:intergenic |
| AGGGGTTTCCATTGCAAAGA+GGG | 0.478932 | 7_3:-20250110 | None:intergenic |
| AGGTTACCCGCCACGTCCTT+CGG | 0.484081 | 7_3:-20249945 | None:intergenic |
| TTCCGATTGTACAGATTGCC+CGG | 0.484990 | 7_3:-20251029 | None:intergenic |
| CTCTTCTATCTCATTCAACA+CGG | 0.486759 | 7_3:-20251844 | None:intergenic |
| TACCATAAGGATAGTACTCT+GGG | 0.486791 | 7_3:-20251878 | None:intergenic |
| AACGTACGATGGGGTGACCT+TGG | 0.488416 | 7_3:+20251942 | Msa1096180:CDS |
| GAGATCTCCGAAGGGCTGCT+TGG | 0.489218 | 7_3:-20244593 | None:intergenic |
| GATGGAAACGAAGAAGAAGA+AGG | 0.496348 | 7_3:-20244779 | None:intergenic |
| ACTTCGAGCATAACCACAAA+TGG | 0.497023 | 7_3:-20246749 | None:intergenic |
| AGACAGTAGCAGCAAGAAAA+CGG | 0.497992 | 7_3:-20244944 | None:intergenic |
| CTTCATAGATAATGCAAGAT+GGG | 0.499428 | 7_3:+20250636 | Msa1096180:CDS |
| ACGACAATGAGTTGAATAAA+GGG | 0.503154 | 7_3:-20244750 | None:intergenic |
| CTACCATAAGGATAGTACTC+TGG | 0.507992 | 7_3:-20251879 | None:intergenic |
| TTAGAGGACAAAGAAGAAGA+TGG | 0.516185 | 7_3:-20244797 | None:intergenic |
| TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 7_3:+20250641 | Msa1096180:CDS |
| ACCAGGGTTAGGAATGAAGT+TGG | 0.519128 | 7_3:+20251142 | Msa1096180:CDS |
| CATAGTAATATTGGTATGGT+AGG | 0.520610 | 7_3:+20252088 | Msa1096180:three_prime_UTR |
| AGGGCAGCCGCGGCAAATGT+CGG | 0.521873 | 7_3:-20250613 | None:intergenic |
| GCAAGATAGTGAGCACAAAC+CGG | 0.522419 | 7_3:-20251909 | None:intergenic |
| AACAACAAAATACCAGGGTT+AGG | 0.522580 | 7_3:+20251131 | Msa1096180:CDS |
| ATAAAAGTTCAGCCGGATGA+AGG | 0.527613 | 7_3:+20251092 | Msa1096180:CDS |
| CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 7_3:+20249820 | Msa1096180:CDS |
| GTTGCAACCTGAATTATTGT+CGG | 0.530202 | 7_3:+20246459 | Msa1096180:CDS |
| TTGGTACCGAAGGACGTGGC+GGG | 0.530531 | 7_3:+20249939 | Msa1096180:CDS |
| ACCGGACCACGACTACCATA+AGG | 0.535565 | 7_3:-20251891 | None:intergenic |
| AATACTAACCCTCTTTGCAA+TGG | 0.536733 | 7_3:+20250102 | Msa1096180:CDS |
| GGACAAGCCAAGCAGCCCTT+CGG | 0.537297 | 7_3:+20244586 | Msa1096180:five_prime_UTR |
| ACTTGTTATAAAAGTTCAGC+CGG | 0.538788 | 7_3:+20251085 | Msa1096180:CDS |
| ATGGCATAGTAATATTGGTA+TGG | 0.546283 | 7_3:+20252084 | Msa1096180:three_prime_UTR |
| GAAATATCTTCTTCTTAGCA+AGG | 0.548178 | 7_3:-20246576 | None:intergenic |
| TCAACACCCAACAAGGGAAA+GGG | 0.548764 | 7_3:+20244565 | Msa1096180:five_prime_UTR |
| TTCAACACCCAACAAGGGAA+AGG | 0.549303 | 7_3:+20244564 | Msa1096180:five_prime_UTR |
| ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 7_3:+20250640 | Msa1096180:CDS |
| ATTTGTAGCATGATCAAGAT+CGG | 0.550956 | 7_3:-20251060 | None:intergenic |
| GGTACAGTTCAGGAAAGTGC+CGG | 0.553447 | 7_3:+20251010 | Msa1096180:intron |
| AAAATCAACAACAAAATACC+AGG | 0.554633 | 7_3:+20251125 | Msa1096180:CDS |
| TACTATCCTTATGGTAGTCG+TGG | 0.555266 | 7_3:+20251885 | Msa1096180:CDS |
| GGCCAGATACAACGTACGAT+GGG | 0.555526 | 7_3:+20251932 | Msa1096180:CDS |
| GTTCATACTCAACAACATGA+TGG | 0.556492 | 7_3:+20245005 | Msa1096180:CDS |
| TAAATCTTCATTATGCAGCA+AGG | 0.559935 | 7_3:+20251177 | Msa1096180:CDS |
| CCATAATAGTGATTGAGTAA+TGG | 0.566688 | 7_3:-20244724 | None:intergenic |
| TCTTCATAGATAATGCAAGA+TGG | 0.568560 | 7_3:+20250635 | Msa1096180:CDS |
| AGGGGTTACATTGGCTGCAA+CGG | 0.569809 | 7_3:-20246410 | None:intergenic |
| TAACATCTGAGGCTGATCAC+AGG | 0.570436 | 7_3:-20252003 | None:intergenic |
| TTGTCCTTCAACACCCAACA+AGG | 0.571891 | 7_3:+20244558 | Msa1096180:five_prime_UTR |
| ATCTATGAAGAGGGCAGCCG+CGG | 0.574298 | 7_3:-20250623 | None:intergenic |
| TCTTCTATCTCATTCAACAC+GGG | 0.574817 | 7_3:-20251843 | None:intergenic |
| ATGCAACACCTCCTCTTGTG+TGG | 0.580289 | 7_3:-20250543 | None:intergenic |
| GTGATGAACTCGATGCTGCT+TGG | 0.580532 | 7_3:+20251808 | Msa1096180:CDS |
| TGATGACAAAACTGTACCAA+AGG | 0.580864 | 7_3:+20250579 | Msa1096180:CDS |
| CTTCTTAGCAAGGTCTCCAG+AGG | 0.582112 | 7_3:-20246566 | None:intergenic |
| AAGACTCTTGAGATCTCCGA+AGG | 0.583034 | 7_3:-20244602 | None:intergenic |
| TGTTTATTTCAGATACTCGA+AGG | 0.586434 | 7_3:+20251716 | Msa1096180:intron |
| GTTGAAGAAGAGGAAGAAGA+AGG | 0.587129 | 7_3:-20244634 | None:intergenic |
| GATGACAAAACTGTACCAAA+GGG | 0.590628 | 7_3:+20250580 | Msa1096180:CDS |
| GTACAGTTCAGGAAAGTGCC+GGG | 0.595881 | 7_3:+20251011 | Msa1096180:intron |
| CCTGTTGAAAACAGCCATAG+TGG | 0.598255 | 7_3:+20246430 | Msa1096180:CDS |
| AGATAATGCAAGATGGGATG+GGG | 0.599941 | 7_3:+20250642 | Msa1096180:CDS |
| ATCTTGCATTATCTATGAAG+AGG | 0.601254 | 7_3:-20250633 | None:intergenic |
| CAGGGGTTTCCATTGCAAAG+AGG | 0.602818 | 7_3:-20250111 | None:intergenic |
| TCCAACTTCATTCCTAACCC+TGG | 0.603899 | 7_3:-20251143 | None:intergenic |
| TAATAGTGATTGAGTAATGG+AGG | 0.608650 | 7_3:-20244721 | None:intergenic |
| GCATCTATGAATATATTAGG+AGG | 0.613908 | 7_3:-20249286 | None:intergenic |
| GGCAGCCGCGGCAAATGTCG+GGG | 0.616181 | 7_3:-20250611 | None:intergenic |
| TCTTGCATTATCTATGAAGA+GGG | 0.616374 | 7_3:-20250632 | None:intergenic |
| CTTAACCCCGACATTTGCCG+CGG | 0.616851 | 7_3:+20250606 | Msa1096180:CDS |
| ATTTCTCTACATCTAATCCA+AGG | 0.622628 | 7_3:-20251959 | None:intergenic |
| TATAAGAACCACACAAGAGG+AGG | 0.626347 | 7_3:+20250535 | Msa1096180:CDS |
| CAATATAAGAACCACACAAG+AGG | 0.636087 | 7_3:+20250532 | Msa1096180:CDS |
| TATGAGATCGATTAAACTCG+AGG | 0.640857 | 7_3:+20250495 | Msa1096180:CDS |
| ATGGAATCTAAAGTTGAAGA+CGG | 0.647646 | 7_3:+20246493 | Msa1096180:CDS |
| AATGAAGATTTAAATTACTG+CGG | 0.648676 | 7_3:-20251166 | None:intergenic |
| GGTTTGTGCTCACTATCTTG+CGG | 0.651306 | 7_3:+20251911 | Msa1096180:CDS |
| TTTGGTACCGAAGGACGTGG+CGG | 0.661444 | 7_3:+20249938 | Msa1096180:CDS |
| GCCAGATACAACGTACGATG+GGG | 0.669406 | 7_3:+20251933 | Msa1096180:CDS |
| AGATACCAGATGCTTATGAG+AGG | 0.670335 | 7_3:+20251739 | Msa1096180:CDS |
| TGTGAGTTAGCTAACATCTG+AGG | 0.681526 | 7_3:-20252014 | None:intergenic |
| AAAACAGCCATAGTGGCAAG+CGG | 0.681835 | 7_3:+20246437 | Msa1096180:CDS |
| ATGTATTGCCTCGACCACAA+AGG | 0.685820 | 7_3:-20249884 | None:intergenic |
| AGACTCTTGAGATCTCCGAA+GGG | 0.686381 | 7_3:-20244601 | None:intergenic |
| TAATCGATCTCATAGAACGA+AGG | 0.698002 | 7_3:-20250486 | None:intergenic |
| AAATCAACAACAAAATACCA+GGG | 0.703547 | 7_3:+20251126 | Msa1096180:CDS |
| TGTCCTTCAACACCCAACAA+GGG | 0.706241 | 7_3:+20244559 | Msa1096180:five_prime_UTR |
| TTCAACTTTAGATTCCATGG+AGG | 0.714477 | 7_3:-20246488 | None:intergenic |
| ACCATAAGGATAGTACTCTG+GGG | 0.757794 | 7_3:-20251877 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr7_3:20248019-20248038 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr7_3:20248019-20248038 | Msa1096180:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr7_3:20248019-20248038 | Msa1096180:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr7_3:20248018-20248037 | Msa1096180:intron | 0.0% |
| !!! | TTAAATATTTTAAAAAAAAA+GGG | - | chr7_3:20249177-20249196 | None:intergenic | 0.0% |
| !!! | TTTAAATATTTTAAAAAAAA+AGG | - | chr7_3:20249178-20249197 | None:intergenic | 0.0% |
| !!! | TGTAAATTTTTAATCTTTTT+TGG | + | chr7_3:20245060-20245079 | Msa1096180:intron | 10.0% |
| !!! | TATTTTTGTTTTGTATATTT+TGG | + | chr7_3:20246665-20246684 | Msa1096180:intron | 10.0% |
| !! | ATTAAAATATTATTCAGAAA+AGG | - | chr7_3:20251697-20251716 | None:intergenic | 10.0% |
| !!! | TGTTATGATATTATTTTAGA+GGG | + | chr7_3:20245322-20245341 | Msa1096180:intron | 15.0% |
| !! | AATTTATATATGACTTTCTT+AGG | + | chr7_3:20246049-20246068 | Msa1096180:intron | 15.0% |
| !! | TTTATATTATAGTATGTCAT+TGG | + | chr7_3:20246344-20246363 | Msa1096180:intron | 15.0% |
| !! | TGAATTGTTTATTTATTTCA+TGG | + | chr7_3:20246716-20246735 | Msa1096180:intron | 15.0% |
| !! | AATAGTTATTAAGGATAATT+TGG | - | chr7_3:20247476-20247495 | None:intergenic | 15.0% |
| !! | AAATTATCCTTAATAACTAT+TGG | + | chr7_3:20247475-20247494 | Msa1096180:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_3:20247499-20247518 | Msa1096180:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr7_3:20247602-20247621 | Msa1096180:intron | 15.0% |
| !!! | CAAAATGTTTTTATATAAGT+TGG | + | chr7_3:20248443-20248462 | Msa1096180:intron | 15.0% |
| !!! | AATTTTATTTCTTCTACATT+AGG | - | chr7_3:20248718-20248737 | None:intergenic | 15.0% |
| !! | ATCATTAAACATTTAAACTT+AGG | - | chr7_3:20248995-20249014 | None:intergenic | 15.0% |
| !!! | TAAAGTGCTTTATTTAAAAT+GGG | + | chr7_3:20249775-20249794 | Msa1096180:intron | 15.0% |
| !!! | ACTTTTTTTGCTTAAATTTA+AGG | + | chr7_3:20250281-20250300 | Msa1096180:intron | 15.0% |
| !!! | ATTTGAAACAAATGAATTTA+AGG | - | chr7_3:20250415-20250434 | None:intergenic | 15.0% |
| !!! | ATTAAACTTCTAAATTGTTT+TGG | + | chr7_3:20250969-20250988 | Msa1096180:intron | 15.0% |
| !!! | GAGATTTTTCATTTTATTTT+TGG | + | chr7_3:20252172-20252191 | Msa1096180:three_prime_UTR | 15.0% |
| !!! | TTTTCATTTTATTTTTGGTT+TGG | + | chr7_3:20252177-20252196 | Msa1096180:three_prime_UTR | 15.0% |
| !! | TTTACACAAAACAAACAAAA+GGG | - | chr7_3:20245046-20245065 | None:intergenic | 20.0% |
| !! | ATTTACACAAAACAAACAAA+AGG | - | chr7_3:20245047-20245066 | None:intergenic | 20.0% |
| !!! | GTGTTATGATATTATTTTAG+AGG | + | chr7_3:20245321-20245340 | Msa1096180:intron | 20.0% |
| !!! | TTTTTTCAAATTATCATCGT+TGG | + | chr7_3:20245472-20245491 | Msa1096180:intron | 20.0% |
| !! | GTTTAATCATATCTCAATAA+GGG | + | chr7_3:20245665-20245684 | Msa1096180:intron | 20.0% |
| !!! | ACTTATTTAACTTTAGTTAC+TGG | + | chr7_3:20245701-20245720 | Msa1096180:intron | 20.0% |
| !! | GAATAACTATCTATTAAGTT+GGG | - | chr7_3:20246185-20246204 | None:intergenic | 20.0% |
| !! | TGAATAACTATCTATTAAGT+TGG | - | chr7_3:20246186-20246205 | None:intergenic | 20.0% |
| !!! | GTTTTGTATATTTTGGAAAT+TGG | + | chr7_3:20246672-20246691 | Msa1096180:intron | 20.0% |
| !! | AAACTAACCAATAGTTATTA+AGG | - | chr7_3:20247485-20247504 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_3:20247562-20247581 | Msa1096180:intron | 20.0% |
| !!! | AGAAACATCTTTTAAGAAAT+TGG | - | chr7_3:20247743-20247762 | None:intergenic | 20.0% |
| !!! | AACCATTTAAGATATTGTTT+TGG | - | chr7_3:20247842-20247861 | None:intergenic | 20.0% |
| !! | GTTTAATATATTACTCAATG+TGG | + | chr7_3:20247859-20247878 | Msa1096180:intron | 20.0% |
| !! | AGAATAGATGATAAGAATAA+AGG | + | chr7_3:20248772-20248791 | Msa1096180:intron | 20.0% |
| !! | AAGAATATAATGATGTGATT+AGG | - | chr7_3:20249025-20249044 | None:intergenic | 20.0% |
| !!! | AATACAAAAATTGCTTTTGT+AGG | + | chr7_3:20249225-20249244 | Msa1096180:intron | 20.0% |
| !!! | ATACAAAAATTGCTTTTGTA+GGG | + | chr7_3:20249226-20249245 | Msa1096180:intron | 20.0% |
| !!! | CTAATTATCTGTAGATTTTA+AGG | + | chr7_3:20249748-20249767 | Msa1096180:intron | 20.0% |
| !!! | GTAAAGTGCTTTATTTAAAA+TGG | + | chr7_3:20249774-20249793 | Msa1096180:intron | 20.0% |
| !!! | TGGTTATATACTTTTGTTAT+AGG | + | chr7_3:20250177-20250196 | Msa1096180:intron | 20.0% |
| !!! | TACTTTTCTGCTTATATTTA+AGG | - | chr7_3:20250237-20250256 | None:intergenic | 20.0% |
| !! | TTAGAAGTTTAATAGAAAGA+TGG | - | chr7_3:20250962-20250981 | None:intergenic | 20.0% |
| !! | AATGAAGATTTAAATTACTG+CGG | - | chr7_3:20251169-20251188 | None:intergenic | 20.0% |
| !! | TCAAACAAAATCAACTTTAT+GGG | + | chr7_3:20251214-20251233 | Msa1096180:intron | 20.0% |
| !! | AATATCTTTGTATATCTTCT+TGG | + | chr7_3:20251290-20251309 | Msa1096180:intron | 20.0% |
| !!! | CATGATTTTTCATCTTATTT+AGG | + | chr7_3:20251393-20251412 | Msa1096180:intron | 20.0% |
| !!! | TTTGAATGTATTTTGAATAG+AGG | + | chr7_3:20252240-20252259 | Msa1096180:three_prime_UTR | 20.0% |
| !!! | TTGAATGTATTTTGAATAGA+GGG | + | chr7_3:20252241-20252260 | Msa1096180:three_prime_UTR | 20.0% |
| !! | AGCTTATTGTTTGAGTTTAA+TGG | + | chr7_3:20245089-20245108 | Msa1096180:intron | 25.0% |
| ! | GAGAAATAGTGAATTCATAT+TGG | - | chr7_3:20245153-20245172 | None:intergenic | 25.0% |
| ! | TTCAATAACAGTCATGTATT+TGG | - | chr7_3:20245217-20245236 | None:intergenic | 25.0% |
| !!! | ATTTTAGAGGGTAATAATAG+AGG | + | chr7_3:20245334-20245353 | Msa1096180:intron | 25.0% |
| ! | CGTTTAATCATATCTCAATA+AGG | + | chr7_3:20245664-20245683 | Msa1096180:intron | 25.0% |
| !! | ATATATCTAAAATTTGCACC+TGG | + | chr7_3:20246101-20246120 | Msa1096180:intron | 25.0% |
| !!! | TGAAAGTTTTGATTTGTGTT+GGG | + | chr7_3:20246305-20246324 | Msa1096180:intron | 25.0% |
| ! | ACTGTTAGTATAACTATTGT+TGG | + | chr7_3:20246541-20246560 | Msa1096180:CDS | 25.0% |
| ! | ATATATCAATATCCAACCTT+AGG | - | chr7_3:20246637-20246656 | None:intergenic | 25.0% |
| ! | ATTGGTTATGTGTATGTATT+TGG | + | chr7_3:20246690-20246709 | Msa1096180:intron | 25.0% |
| ! | TTGGTTATGTGTATGTATTT+GGG | + | chr7_3:20246691-20246710 | Msa1096180:intron | 25.0% |
| !! | TGCTTTCTTTATCTTTTCTT+GGG | + | chr7_3:20247078-20247097 | Msa1096180:intron | 25.0% |
| !! | TTGTGTCATTAGCAATATAA+GGG | - | chr7_3:20247325-20247344 | None:intergenic | 25.0% |
| !! | TTTGTGTCATTAGCAATATA+AGG | - | chr7_3:20247326-20247345 | None:intergenic | 25.0% |
| ! | ATTGCTAATGACACAAAATT+TGG | + | chr7_3:20247329-20247348 | Msa1096180:intron | 25.0% |
| ! | TTGCTAATGACACAAAATTT+GGG | + | chr7_3:20247330-20247349 | Msa1096180:intron | 25.0% |
| !! | ATGTTTGAGAATTTTTGTTG+TGG | + | chr7_3:20247685-20247704 | Msa1096180:intron | 25.0% |
| !! | AAAAGATGTTTCTATCATTC+TGG | + | chr7_3:20247750-20247769 | Msa1096180:intron | 25.0% |
| ! | TTATACAGAAAGACAAATGT+TGG | + | chr7_3:20248250-20248269 | Msa1096180:intron | 25.0% |
| ! | TCAATTAACAATATTCTGAC+TGG | + | chr7_3:20248293-20248312 | Msa1096180:intron | 25.0% |
| !!! | TTGGTTTTCATAAACTTGTA+GGG | + | chr7_3:20248462-20248481 | Msa1096180:intron | 25.0% |
| !! | ATTAGGTTGTTTATCAAAAC+AGG | - | chr7_3:20248489-20248508 | None:intergenic | 25.0% |
| ! | AACCTAATTAAGAGAACATA+TGG | + | chr7_3:20248501-20248520 | Msa1096180:intron | 25.0% |
| ! | ATCCATATGTTCTCTTAATT+AGG | - | chr7_3:20248506-20248525 | None:intergenic | 25.0% |
| ! | GTGCTAATAAAAAGACATTA+AGG | + | chr7_3:20248672-20248691 | Msa1096180:intron | 25.0% |
| ! | TTCTACATTAGGAAAATACT+GGG | - | chr7_3:20248707-20248726 | None:intergenic | 25.0% |
| ! | AGATGATAAGAATAAAGGAA+TGG | + | chr7_3:20248777-20248796 | Msa1096180:intron | 25.0% |
| !! | TATAGAGATGACATTTTATG+TGG | - | chr7_3:20248853-20248872 | None:intergenic | 25.0% |
| ! | ACAGCATCTATGAATATATT+AGG | - | chr7_3:20249292-20249311 | None:intergenic | 25.0% |
| ! | CTTATATGATAAAGTGTGAA+TGG | - | chr7_3:20249507-20249526 | None:intergenic | 25.0% |
| !! | CTGTTTTCATAAGCTTATAT+TGG | + | chr7_3:20249597-20249616 | Msa1096180:intron | 25.0% |
| !!! | AACAATCTTAGAAGTGTTTA+TGG | + | chr7_3:20249688-20249707 | Msa1096180:intron | 25.0% |
| ! | TAAAATGGGAAACATTATAC+AGG | + | chr7_3:20249789-20249808 | Msa1096180:intron | 25.0% |
| ! | CAAAAATGAGATTTGAGAAT+CGG | - | chr7_3:20249862-20249881 | None:intergenic | 25.0% |
| !! | TTGATATTCTCAGAAGATTT+TGG | + | chr7_3:20249920-20249939 | Msa1096180:CDS | 25.0% |
| ! | CACTTATTCTGATCTTAAAA+TGG | + | chr7_3:20249988-20250007 | Msa1096180:intron | 25.0% |
| !! | TTTCTGCTTATATTTAAGGT+CGG | - | chr7_3:20250233-20250252 | None:intergenic | 25.0% |
| ! | GCAAAAAAAGTTCATGTATT+TGG | - | chr7_3:20250272-20250291 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTAAATTTAAGGC+CGG | + | chr7_3:20250285-20250304 | Msa1096180:intron | 25.0% |
| !!! | ACTTTTTTCTGAAATTCCTT+TGG | + | chr7_3:20250338-20250357 | Msa1096180:intron | 25.0% |
| !!! | CTTTTTTCTGAAATTCCTTT+GGG | + | chr7_3:20250339-20250358 | Msa1096180:intron | 25.0% |
| ! | TTCAAATAAATACCTTCATC+CGG | - | chr7_3:20251107-20251126 | None:intergenic | 25.0% |
| ! | AAAATCAACAACAAAATACC+AGG | + | chr7_3:20251125-20251144 | Msa1096180:CDS | 25.0% |
| ! | AAATCAACAACAAAATACCA+GGG | + | chr7_3:20251126-20251145 | Msa1096180:CDS | 25.0% |
| ! | CTCAAACAAAATCAACTTTA+TGG | + | chr7_3:20251213-20251232 | Msa1096180:intron | 25.0% |
| !! | TTCTAACGGAATGTATTTTT+GGG | - | chr7_3:20251242-20251261 | None:intergenic | 25.0% |
| !! | TTTCTAACGGAATGTATTTT+TGG | - | chr7_3:20251243-20251262 | None:intergenic | 25.0% |
| !!! | GATGTTCTCTTATTTTCTAA+CGG | - | chr7_3:20251256-20251275 | None:intergenic | 25.0% |
| ! | AATAAGAGAACATCTCATTA+TGG | + | chr7_3:20251262-20251281 | Msa1096180:intron | 25.0% |
| ! | AATAATAGCAATAAGAGATG+CGG | - | chr7_3:20251365-20251384 | None:intergenic | 25.0% |
| ! | AATGTGTGTCAAATATCATA+TGG | - | chr7_3:20251646-20251665 | None:intergenic | 25.0% |
| !! | GTTTAATTTCACTGCATTAA+TGG | - | chr7_3:20251675-20251694 | None:intergenic | 25.0% |
| !!! | TCATTTTATTTTTGGTTTGG+TGG | + | chr7_3:20252180-20252199 | Msa1096180:three_prime_UTR | 25.0% |
| ! | ATCTTGAAATTGTATGACTT+TGG | + | chr7_3:20252278-20252297 | Msa1096180:three_prime_UTR | 25.0% |
| TAATAGTGATTGAGTAATGG+AGG | - | chr7_3:20244724-20244743 | None:intergenic | 30.0% | |
| CCATAATAGTGATTGAGTAA+TGG | - | chr7_3:20244727-20244746 | None:intergenic | 30.0% | |
| CCATTACTCAATCACTATTA+TGG | + | chr7_3:20244724-20244743 | Msa1096180:exon | 30.0% | |
| ! | ACGACAATGAGTTGAATAAA+GGG | - | chr7_3:20244753-20244772 | None:intergenic | 30.0% |
| ! | AACGACAATGAGTTGAATAA+AGG | - | chr7_3:20244754-20244773 | None:intergenic | 30.0% |
| ! | NNNNNNAGCAGATTGGTTAG+AGG | - | chr7_3:20244816-20244835 | None:intergenic | 30.0% |
| !! | TCAACACAATTTGTTACAAC+AGG | + | chr7_3:20244977-20244996 | Msa1096180:CDS | 30.0% |
| TCCATGTTATACCATTGAAA+TGG | + | chr7_3:20245171-20245190 | Msa1096180:intron | 30.0% | |
| CCATGTTATACCATTGAAAT+GGG | + | chr7_3:20245172-20245191 | Msa1096180:intron | 30.0% | |
| CATGTTATACCATTGAAATG+GGG | + | chr7_3:20245173-20245192 | Msa1096180:intron | 30.0% | |
| AAAAATAAGATACACACCGA+AGG | - | chr7_3:20245263-20245282 | None:intergenic | 30.0% | |
| GTAATCACATGTATCAGTAT+CGG | - | chr7_3:20245406-20245425 | None:intergenic | 30.0% | |
| TTAAATAAGTCTATCCGAAC+AGG | - | chr7_3:20245691-20245710 | None:intergenic | 30.0% | |
| ! | GACGACTATTCAAACTTTTA+AGG | + | chr7_3:20246019-20246038 | Msa1096180:intron | 30.0% |
| !! | GACTATTCAAACTTTTAAGG+TGG | + | chr7_3:20246022-20246041 | Msa1096180:intron | 30.0% |
| TCGACGTATTATAAAATGGA+TGG | - | chr7_3:20246263-20246282 | None:intergenic | 30.0% | |
| CATGTCGACGTATTATAAAA+TGG | - | chr7_3:20246267-20246286 | None:intergenic | 30.0% | |
| !!! | GTGAAAGTTTTGATTTGTGT+TGG | + | chr7_3:20246304-20246323 | Msa1096180:intron | 30.0% |
| !!! | GAAAGTTTTGATTTGTGTTG+GGG | + | chr7_3:20246306-20246325 | Msa1096180:intron | 30.0% |
| GATAAAACCGACAATAATTC+AGG | - | chr7_3:20246469-20246488 | None:intergenic | 30.0% | |
| ! | ATGGAATCTAAAGTTGAAGA+CGG | + | chr7_3:20246493-20246512 | Msa1096180:CDS | 30.0% |
| GAAATATCTTCTTCTTAGCA+AGG | - | chr7_3:20246579-20246598 | None:intergenic | 30.0% | |
| ! | ACTTTTTGCACTTTACTATG+AGG | + | chr7_3:20246603-20246622 | Msa1096180:CDS | 30.0% |
| ! | CTTTTTGCACTTTACTATGA+GGG | + | chr7_3:20246604-20246623 | Msa1096180:CDS | 30.0% |
| TTACCTGTAGAATTGATAAG+AGG | + | chr7_3:20246815-20246834 | Msa1096180:intron | 30.0% | |
| TTACCTCTTATCAATTCTAC+AGG | - | chr7_3:20246821-20246840 | None:intergenic | 30.0% | |
| AGCGAAATTTGAACAAACTA+CGG | + | chr7_3:20246995-20247014 | Msa1096180:intron | 30.0% | |
| ! | GTGCTTTCTTTATCTTTTCT+TGG | + | chr7_3:20247077-20247096 | Msa1096180:intron | 30.0% |
| ! | GCTTTCTTTATCTTTTCTTG+GGG | + | chr7_3:20247079-20247098 | Msa1096180:intron | 30.0% |
| ! | TTTATCTTTTCTTGGGGTTA+TGG | + | chr7_3:20247085-20247104 | Msa1096180:intron | 30.0% |
| !! | TGATTCAGGTTGTCAAATAT+TGG | + | chr7_3:20247110-20247129 | Msa1096180:intron | 30.0% |
| AACTTTGGATTTCTCATTGT+GGG | + | chr7_3:20247297-20247316 | Msa1096180:intron | 30.0% | |
| ! | ACACAAAATTTGGGATTCAA+TGG | + | chr7_3:20247339-20247358 | Msa1096180:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr7_3:20247393-20247412 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr7_3:20247394-20247413 | Msa1096180:intron | 30.0% |
| GGCCAAAACAATATCTTAAA+TGG | + | chr7_3:20247837-20247856 | Msa1096180:intron | 30.0% | |
| TAATAAGAGAGTAAGCTTTC+TGG | + | chr7_3:20247909-20247928 | Msa1096180:intron | 30.0% | |
| AACTTTCATCCAGATTAGAT+AGG | + | chr7_3:20247949-20247968 | Msa1096180:intron | 30.0% | |
| ACAATACTCAAGGAACTTTA+TGG | - | chr7_3:20248336-20248355 | None:intergenic | 30.0% | |
| !!! | GTTGGTTTTCATAAACTTGT+AGG | + | chr7_3:20248461-20248480 | Msa1096180:intron | 30.0% |
| CTTCTACATTAGGAAAATAC+TGG | - | chr7_3:20248708-20248727 | None:intergenic | 30.0% | |
| !! | AGAAGTCATTTAGCTTTCAA+TGG | - | chr7_3:20248744-20248763 | None:intergenic | 30.0% |
| GCTGAAGAATAAAGAAAACA+AGG | + | chr7_3:20248802-20248821 | Msa1096180:intron | 30.0% | |
| GTAACAACTAATGAATGACA+GGG | - | chr7_3:20248913-20248932 | None:intergenic | 30.0% | |
| AGTAACAACTAATGAATGAC+AGG | - | chr7_3:20248914-20248933 | None:intergenic | 30.0% | |
| GCTCAGTATATGAATAATGA+AGG | + | chr7_3:20249120-20249139 | Msa1096180:intron | 30.0% | |
| !! | AAAAATTGCTTTTGTAGGGT+GGG | + | chr7_3:20249230-20249249 | Msa1096180:intron | 30.0% |
| GAGGAATTGAAAGATAAAAC+AGG | - | chr7_3:20249270-20249289 | None:intergenic | 30.0% | |
| GCATCTATGAATATATTAGG+AGG | - | chr7_3:20249289-20249308 | None:intergenic | 30.0% | |
| AAACCTGAAAATTTGATCCT+CGG | - | chr7_3:20249440-20249459 | None:intergenic | 30.0% | |
| TAATTAGAGCATGTTTGGAT+TGG | - | chr7_3:20249735-20249754 | None:intergenic | 30.0% | |
| ACAGATAATTAGAGCATGTT+TGG | - | chr7_3:20249740-20249759 | None:intergenic | 30.0% | |
| !! | ATCTCATTTTTGAACCTTTG+TGG | + | chr7_3:20249870-20249889 | Msa1096180:CDS | 30.0% |
| ! | TTTATATCTTTTCCACGTGT+AGG | + | chr7_3:20250026-20250045 | Msa1096180:intron | 30.0% |
| TGTAGGTACTTTGACAATTA+TGG | + | chr7_3:20250043-20250062 | Msa1096180:intron | 30.0% | |
| AGAGGACATTAGAAATGAAA+AGG | + | chr7_3:20250147-20250166 | Msa1096180:intron | 30.0% | |
| AGAAATGAAAAGGTCTCATA+TGG | + | chr7_3:20250157-20250176 | Msa1096180:intron | 30.0% | |
| CATGACTTTCAATTGCTTAA+TGG | + | chr7_3:20250448-20250467 | Msa1096180:intron | 30.0% | |
| !! | TACAGTTTTGTCATCAATGT+AGG | - | chr7_3:20250575-20250594 | None:intergenic | 30.0% |
| TCTTGCATTATCTATGAAGA+GGG | - | chr7_3:20250635-20250654 | None:intergenic | 30.0% | |
| ATCTTGCATTATCTATGAAG+AGG | - | chr7_3:20250636-20250655 | None:intergenic | 30.0% | |
| TCTTCATAGATAATGCAAGA+TGG | + | chr7_3:20250635-20250654 | Msa1096180:CDS | 30.0% | |
| CTTCATAGATAATGCAAGAT+GGG | + | chr7_3:20250636-20250655 | Msa1096180:CDS | 30.0% | |
| !! | TACAAAGTGTTGTCAAATAG+CGG | - | chr7_3:20250817-20250836 | None:intergenic | 30.0% |
| TTCTCAAATAGCCGATATAT+CGG | - | chr7_3:20250904-20250923 | None:intergenic | 30.0% | |
| ! | AATCTGTACAATCGGAATTT+TGG | + | chr7_3:20251035-20251054 | Msa1096180:CDS | 30.0% |
| ATTTGTAGCATGATCAAGAT+CGG | - | chr7_3:20251063-20251082 | None:intergenic | 30.0% | |
| !! | ACTTGTTATAAAAGTTCAGC+CGG | + | chr7_3:20251085-20251104 | Msa1096180:CDS | 30.0% |
| TAAATCTTCATTATGCAGCA+AGG | + | chr7_3:20251177-20251196 | Msa1096180:CDS | 30.0% | |
| !! | TCTAACGGAATGTATTTTTG+GGG | - | chr7_3:20251241-20251260 | None:intergenic | 30.0% |
| ACCAGCTAAATAATCTAATG+CGG | - | chr7_3:20251556-20251575 | None:intergenic | 30.0% | |
| TGTTTATTTCAGATACTCGA+AGG | + | chr7_3:20251716-20251735 | Msa1096180:intron | 30.0% | |
| ATTTCTCTACATCTAATCCA+AGG | - | chr7_3:20251962-20251981 | None:intergenic | 30.0% | |
| ATGGCATAGTAATATTGGTA+TGG | + | chr7_3:20252084-20252103 | Msa1096180:three_prime_UTR | 30.0% | |
| CATAGTAATATTGGTATGGT+AGG | + | chr7_3:20252088-20252107 | Msa1096180:three_prime_UTR | 30.0% | |
| !!! | TTTTATTTTTGGTTTGGTGG+AGG | + | chr7_3:20252183-20252202 | Msa1096180:three_prime_UTR | 30.0% |
| !!! | TTTATTTTTGGTTTGGTGGA+GGG | + | chr7_3:20252184-20252203 | Msa1096180:three_prime_UTR | 30.0% |
| AAAAAACGAGGTTGAAGAAG+AGG | - | chr7_3:20244647-20244666 | None:intergenic | 35.0% | |
| ! | GATTGAGTAATGGAGGAAAA+GGG | - | chr7_3:20244717-20244736 | None:intergenic | 35.0% |
| ! | TGATTGAGTAATGGAGGAAA+AGG | - | chr7_3:20244718-20244737 | None:intergenic | 35.0% |
| TTAGAGGACAAAGAAGAAGA+TGG | - | chr7_3:20244800-20244819 | None:intergenic | 35.0% | |
| GTTCATACTCAACAACATGA+TGG | + | chr7_3:20245005-20245024 | Msa1096180:CDS | 35.0% | |
| CCCATTTCAATGGTATAACA+TGG | - | chr7_3:20245175-20245194 | None:intergenic | 35.0% | |
| GTGAAGTTATGTTACACCTT+CGG | + | chr7_3:20245244-20245263 | Msa1096180:intron | 35.0% | |
| TAATAGAGGAATAGTGCACT+AGG | + | chr7_3:20245348-20245367 | Msa1096180:intron | 35.0% | |
| ATCACATGTATCAGTGTCAA+TGG | - | chr7_3:20245433-20245452 | None:intergenic | 35.0% | |
| CCATGTGTGATATTTAAACG+CGG | + | chr7_3:20245640-20245659 | Msa1096180:intron | 35.0% | |
| ! | TTTGGATGAACAACTTTTGC+AGG | - | chr7_3:20245925-20245944 | None:intergenic | 35.0% |
| ATTGGGACAAATATCTACCT+AGG | - | chr7_3:20245953-20245972 | None:intergenic | 35.0% | |
| TGACACCATAGTGATATGAT+TGG | + | chr7_3:20245997-20246016 | Msa1096180:intron | 35.0% | |
| AGGTTTCTGAGCAAAAACTA+AGG | + | chr7_3:20246069-20246088 | Msa1096180:intron | 35.0% | |
| GCTATATATTCAATCGAACC+AGG | - | chr7_3:20246122-20246141 | None:intergenic | 35.0% | |
| CAATTATACACCGATAGTAG+AGG | - | chr7_3:20246222-20246241 | None:intergenic | 35.0% | |
| TCTTAGTCTCAGTATGACAA+TGG | + | chr7_3:20246371-20246390 | Msa1096180:intron | 35.0% | |
| GTTGCAACCTGAATTATTGT+CGG | + | chr7_3:20246459-20246478 | Msa1096180:CDS | 35.0% | |
| TTCAACTTTAGATTCCATGG+AGG | - | chr7_3:20246491-20246510 | None:intergenic | 35.0% | |
| GTCTTCAACTTTAGATTCCA+TGG | - | chr7_3:20246494-20246513 | None:intergenic | 35.0% | |
| ! | TAGTAAAGTGCAAAAAGTGC+TGG | - | chr7_3:20246601-20246620 | None:intergenic | 35.0% |
| TGATGCAGAACTGAGAAATA+TGG | + | chr7_3:20246780-20246799 | Msa1096180:CDS | 35.0% | |
| GCTCTATAAAACTGAAACGA+AGG | - | chr7_3:20246864-20246883 | None:intergenic | 35.0% | |
| ATTCCGCTATTTAACAACAC+TGG | - | chr7_3:20246897-20246916 | None:intergenic | 35.0% | |
| ! | AATCCGCGATTGATAACATT+TGG | + | chr7_3:20247026-20247045 | Msa1096180:intron | 35.0% |
| ! | ATCCGCGATTGATAACATTT+GGG | + | chr7_3:20247027-20247046 | Msa1096180:intron | 35.0% |
| GATCCAAAAATCTGACATAC+AGG | - | chr7_3:20247248-20247267 | None:intergenic | 35.0% | |
| GAACTTTGGATTTCTCATTG+TGG | + | chr7_3:20247296-20247315 | Msa1096180:intron | 35.0% | |
| ACTTTGGATTTCTCATTGTG+GGG | + | chr7_3:20247298-20247317 | Msa1096180:intron | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr7_3:20247524-20247543 | Msa1096180:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr7_3:20247528-20247547 | Msa1096180:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr7_3:20247628-20247647 | Msa1096180:intron | 35.0% |
| !! | AGGGAGTATTTGTTATGCTT+GGG | + | chr7_3:20247651-20247670 | Msa1096180:intron | 35.0% |
| ! | AGTTTTCCGGAGAATCATAT+TGG | - | chr7_3:20247776-20247795 | None:intergenic | 35.0% |
| CTGAATGAACATGAGGTAAT+TGG | + | chr7_3:20247816-20247835 | Msa1096180:intron | 35.0% | |
| TATTACTCAATGTGGTTCCA+AGG | + | chr7_3:20247867-20247886 | Msa1096180:intron | 35.0% | |
| AACAAAATTCACATGCACCT+TGG | - | chr7_3:20247887-20247906 | None:intergenic | 35.0% | |
| TCAAGGAACTTTATGGTACA+AGG | - | chr7_3:20248329-20248348 | None:intergenic | 35.0% | |
| CAATAACAGCACAATACTCA+AGG | - | chr7_3:20248346-20248365 | None:intergenic | 35.0% | |
| GTAAGCACAAGCACTTAATT+AGG | - | chr7_3:20248392-20248411 | None:intergenic | 35.0% | |
| AACTGACATGTGTCAAACAT+CGG | + | chr7_3:20248624-20248643 | Msa1096180:intron | 35.0% | |
| ! | TTTTTATTAGCACAGACACC+TGG | - | chr7_3:20248665-20248684 | None:intergenic | 35.0% |
| AGTATGACAAATTTGCACAG+TGG | - | chr7_3:20249062-20249081 | None:intergenic | 35.0% | |
| !! | CAAAAATTGCTTTTGTAGGG+TGG | + | chr7_3:20249229-20249248 | Msa1096180:intron | 35.0% |
| ! | GTCATTGTTGAAAAGCCTTT+TGG | + | chr7_3:20249361-20249380 | Msa1096180:intron | 35.0% |
| AACTAAACTATGACCGTGTT+TGG | + | chr7_3:20249463-20249482 | Msa1096180:intron | 35.0% | |
| GCGCTTAATATATCCAAACA+CGG | - | chr7_3:20249479-20249498 | None:intergenic | 35.0% | |
| AGATTGTTTGAAAGAGCTGA+TGG | - | chr7_3:20249676-20249695 | None:intergenic | 35.0% | |
| AATAAGTGTGAATGCTGCAA+AGG | - | chr7_3:20249976-20249995 | None:intergenic | 35.0% | |
| AATACTAACCCTCTTTGCAA+TGG | + | chr7_3:20250102-20250121 | Msa1096180:CDS | 35.0% | |
| ! | TGCTTATATTTAAGGTCGGA+GGG | - | chr7_3:20250229-20250248 | None:intergenic | 35.0% |
| ACTCTAGCATATAAATCCTC+CGG | - | chr7_3:20250307-20250326 | None:intergenic | 35.0% | |
| ATATGCTAGAGTTTGAACTC+TGG | + | chr7_3:20250315-20250334 | Msa1096180:intron | 35.0% | |
| !!! | TTTTCTGAAATTCCTTTGGG+TGG | + | chr7_3:20250342-20250361 | Msa1096180:intron | 35.0% |
| ! | TCAATTGCTTAATGGATGTC+AGG | + | chr7_3:20250456-20250475 | Msa1096180:intron | 35.0% |
| TAATCGATCTCATAGAACGA+AGG | - | chr7_3:20250489-20250508 | None:intergenic | 35.0% | |
| TATGAGATCGATTAAACTCG+AGG | + | chr7_3:20250495-20250514 | Msa1096180:CDS | 35.0% | |
| ! | AAACTCGAGGATGTAGTTTT+AGG | + | chr7_3:20250508-20250527 | Msa1096180:CDS | 35.0% |
| CTCTTGTGTGGTTCTTATAT+TGG | - | chr7_3:20250534-20250553 | None:intergenic | 35.0% | |
| CAATATAAGAACCACACAAG+AGG | + | chr7_3:20250532-20250551 | Msa1096180:CDS | 35.0% | |
| TGATGACAAAACTGTACCAA+AGG | + | chr7_3:20250579-20250598 | Msa1096180:CDS | 35.0% | |
| GATGACAAAACTGTACCAAA+GGG | + | chr7_3:20250580-20250599 | Msa1096180:CDS | 35.0% | |
| ATAGATAATGCAAGATGGGA+TGG | + | chr7_3:20250640-20250659 | Msa1096180:CDS | 35.0% | |
| TAGATAATGCAAGATGGGAT+GGG | + | chr7_3:20250641-20250660 | Msa1096180:CDS | 35.0% | |
| !!! | TACCTTTTTTGATGAAGGCA+GGG | + | chr7_3:20250665-20250684 | Msa1096180:intron | 35.0% |
| TAGCAGCTTGTGAAAATTTG+CGG | + | chr7_3:20250745-20250764 | Msa1096180:intron | 35.0% | |
| AACAACAAAATACCAGGGTT+AGG | + | chr7_3:20251131-20251150 | Msa1096180:CDS | 35.0% | |
| TCCGCATTAGATTATTTAGC+TGG | + | chr7_3:20251552-20251571 | Msa1096180:intron | 35.0% | |
| TTGCTTCTTGATGCAATTGA+AGG | + | chr7_3:20251762-20251781 | Msa1096180:CDS | 35.0% | |
| TCTTCTATCTCATTCAACAC+GGG | - | chr7_3:20251846-20251865 | None:intergenic | 35.0% | |
| CTCTTCTATCTCATTCAACA+CGG | - | chr7_3:20251847-20251866 | None:intergenic | 35.0% | |
| TACCATAAGGATAGTACTCT+GGG | - | chr7_3:20251881-20251900 | None:intergenic | 35.0% | |
| ! | TCGATTTGTGGTTTCTTGTT+TGG | + | chr7_3:20252039-20252058 | Msa1096180:three_prime_UTR | 35.0% |
| !!! | CAGTTTTTTCAAGTCGAGTA+TGG | + | chr7_3:20252065-20252084 | Msa1096180:three_prime_UTR | 35.0% |
| CGAGTATGGCATAGTAATAT+TGG | + | chr7_3:20252079-20252098 | Msa1096180:three_prime_UTR | 35.0% | |
| GTTGAAGAAGAGGAAGAAGA+AGG | - | chr7_3:20244637-20244656 | None:intergenic | 40.0% | |
| GATGGAAACGAAGAAGAAGA+AGG | - | chr7_3:20244782-20244801 | None:intergenic | 40.0% | |
| AGACAGTAGCAGCAAGAAAA+CGG | - | chr7_3:20244947-20244966 | None:intergenic | 40.0% | |
| ! | ATCACATGTATCAGTATCGG+TGG | - | chr7_3:20245403-20245422 | None:intergenic | 40.0% |
| GAATTGATCACCTTAGCTAG+AGG | + | chr7_3:20245609-20245628 | Msa1096180:intron | 40.0% | |
| GGATTTATCTCCTCTAGCTA+AGG | - | chr7_3:20245622-20245641 | None:intergenic | 40.0% | |
| CCGCGTTTAAATATCACACA+TGG | - | chr7_3:20245643-20245662 | None:intergenic | 40.0% | |
| TATCTCAATAAGGGCCTGTT+CGG | + | chr7_3:20245674-20245693 | Msa1096180:intron | 40.0% | |
| ATATCTACCTAGGCTCTGTT+TGG | - | chr7_3:20245943-20245962 | None:intergenic | 40.0% | |
| GTCGTCCAATCATATCACTA+TGG | - | chr7_3:20246005-20246024 | None:intergenic | 40.0% | |
| GACACTTACACCTCTACTAT+CGG | + | chr7_3:20246209-20246228 | Msa1096180:intron | 40.0% | |
| TGACAATGGCATGTAAATGC+AGG | + | chr7_3:20246385-20246404 | Msa1096180:intron | 40.0% | |
| ! | GTTTTCAACAGGGGTTACAT+TGG | - | chr7_3:20246422-20246441 | None:intergenic | 40.0% |
| !! | ACTATGGCTGTTTTCAACAG+GGG | - | chr7_3:20246431-20246450 | None:intergenic | 40.0% |
| !! | CACTATGGCTGTTTTCAACA+GGG | - | chr7_3:20246432-20246451 | None:intergenic | 40.0% |
| !!! | ATTGTCGGTTTTATCCTCCA+TGG | + | chr7_3:20246474-20246493 | Msa1096180:CDS | 40.0% |
| ! | AGTTGAAGACGGTGTTGAAA+AGG | + | chr7_3:20246504-20246523 | Msa1096180:CDS | 40.0% |
| ATAACTATTGTTGGAGCCTC+TGG | + | chr7_3:20246550-20246569 | Msa1096180:CDS | 40.0% | |
| ACTTCGAGCATAACCACAAA+TGG | - | chr7_3:20246752-20246771 | None:intergenic | 40.0% | |
| TGAAACGAAGGAGAACAAGT+TGG | - | chr7_3:20246852-20246871 | None:intergenic | 40.0% | |
| ! | CTGCCAGTGTTGTTAAATAG+CGG | + | chr7_3:20246891-20246910 | Msa1096180:intron | 40.0% |
| ! | TCCGCGATTGATAACATTTG+GGG | + | chr7_3:20247028-20247047 | Msa1096180:intron | 40.0% |
| ACCCCAAATGTTATCAATCG+CGG | - | chr7_3:20247032-20247051 | None:intergenic | 40.0% | |
| TTGGGGTTATGGTTTGATTC+AGG | + | chr7_3:20247096-20247115 | Msa1096180:intron | 40.0% | |
| AGGTTGTCAAATATTGGCCA+TGG | + | chr7_3:20247116-20247135 | Msa1096180:intron | 40.0% | |
| TTGTCAAATATTGGCCATGG+CGG | + | chr7_3:20247119-20247138 | Msa1096180:intron | 40.0% | |
| !!! | AGATATTGTTGACGGGCTTT+TGG | + | chr7_3:20247151-20247170 | Msa1096180:intron | 40.0% |
| ! | GCTTTCTGCCAATTTTGTGA+AGG | + | chr7_3:20247173-20247192 | Msa1096180:intron | 40.0% |
| ! | TCTGCCAATTTTGTGAAGGA+TGG | + | chr7_3:20247177-20247196 | Msa1096180:intron | 40.0% |
| ! | GATATGGCAGTGCCATATTT+TGG | + | chr7_3:20247222-20247241 | Msa1096180:intron | 40.0% |
| CTGACATACAGGCCAAAATA+TGG | - | chr7_3:20247237-20247256 | None:intergenic | 40.0% | |
| ! | TGGCCTGTATGTCAGATTTT+TGG | + | chr7_3:20247242-20247261 | Msa1096180:intron | 40.0% |
| AAGCAAACCAACGTTGTTGA+TGG | - | chr7_3:20247275-20247294 | None:intergenic | 40.0% | |
| !! | CGTTGGTTTGCTTTGAACTT+TGG | + | chr7_3:20247282-20247301 | Msa1096180:intron | 40.0% |
| CTTTGGATTTCTCATTGTGG+GGG | + | chr7_3:20247299-20247318 | Msa1096180:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_3:20247632-20247651 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr7_3:20247527-20247546 | Msa1096180:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7_3:20247632-20247651 | Msa1096180:intron | 40.0% |
| !! | GAGGGAGTATTTGTTATGCT+TGG | + | chr7_3:20247650-20247669 | Msa1096180:intron | 40.0% |
| AGAGAACTGCAGTGAAAAGA+TGG | + | chr7_3:20247716-20247735 | Msa1096180:intron | 40.0% | |
| TTCTGGCCAATATGATTCTC+CGG | + | chr7_3:20247767-20247786 | Msa1096180:intron | 40.0% | |
| ! | TCTAGTGCTGCAAAGTTTTC+CGG | - | chr7_3:20247789-20247808 | None:intergenic | 40.0% |
| CAAGAAGCTGAATGAACATG+AGG | + | chr7_3:20247809-20247828 | Msa1096180:intron | 40.0% | |
| CTGCAAAGACCTATCTAATC+TGG | - | chr7_3:20247961-20247980 | None:intergenic | 40.0% | |
| !! | CTACCAAAAAGCACCAGATA+AGG | + | chr7_3:20248573-20248592 | Msa1096180:intron | 40.0% |
| ! | GAACCTTATCTGGTGCTTTT+TGG | - | chr7_3:20248579-20248598 | None:intergenic | 40.0% |
| CACCAGATAAGGTTCTATGT+GGG | + | chr7_3:20248584-20248603 | Msa1096180:intron | 40.0% | |
| TACCCACATAGAACCTTATC+TGG | - | chr7_3:20248589-20248608 | None:intergenic | 40.0% | |
| ACTGACATGTGTCAAACATC+GGG | + | chr7_3:20248625-20248644 | Msa1096180:intron | 40.0% | |
| AGACTAGCAACAACACGTAA+CGG | - | chr7_3:20248884-20248903 | None:intergenic | 40.0% | |
| TGATCTTGTTAAAGCAGCTG+AGG | - | chr7_3:20249401-20249420 | None:intergenic | 40.0% | |
| ! | TGACCGAGGATCAAATTTTC+AGG | + | chr7_3:20249434-20249453 | Msa1096180:intron | 40.0% |
| TACAGGATCGATCACTATCT+TGG | + | chr7_3:20249806-20249825 | Msa1096180:intron | 40.0% | |
| CTATCTTGGAAAAGAGCTTG+TGG | + | chr7_3:20249820-20249839 | Msa1096180:CDS | 40.0% | |
| ! | TTTTTGAACCTTTGTGGTCG+AGG | + | chr7_3:20249876-20249895 | Msa1096180:CDS | 40.0% |
| !! | TCAGAAGATTTTGGTACCGA+AGG | + | chr7_3:20249929-20249948 | Msa1096180:CDS | 40.0% |
| ! | ATTGTCAAAGTACCTACACG+TGG | - | chr7_3:20250041-20250060 | None:intergenic | 40.0% |
| AATGGAAACCCCTGTTAGTT+TGG | + | chr7_3:20250120-20250139 | Msa1096180:intron | 40.0% | |
| ! | CTGCTTATATTTAAGGTCGG+AGG | - | chr7_3:20250230-20250249 | None:intergenic | 40.0% |
| ! | TTGCTTAAATTTAAGGCCGG+AGG | + | chr7_3:20250288-20250307 | Msa1096180:intron | 40.0% |
| TCTATAACCATGAGTCTCTG+AGG | - | chr7_3:20250392-20250411 | None:intergenic | 40.0% | |
| TATAAGAACCACACAAGAGG+AGG | + | chr7_3:20250535-20250554 | Msa1096180:CDS | 40.0% | |
| ! | GTTTTGTCATCAATGTAGGC+TGG | - | chr7_3:20250571-20250590 | None:intergenic | 40.0% |
| AGATAATGCAAGATGGGATG+GGG | + | chr7_3:20250642-20250661 | Msa1096180:CDS | 40.0% | |
| !!! | TGGGGTACCTTTTTTGATGA+AGG | + | chr7_3:20250660-20250679 | Msa1096180:intron | 40.0% |
| !!! | GTACCTTTTTTGATGAAGGC+AGG | + | chr7_3:20250664-20250683 | Msa1096180:intron | 40.0% |
| TTCCCTGCCTTCATCAAAAA+AGG | - | chr7_3:20250670-20250689 | None:intergenic | 40.0% | |
| TATTCCTCTCACTTACCTCT+TGG | - | chr7_3:20250704-20250723 | None:intergenic | 40.0% | |
| AGTGCAGACTTCCGATATAT+CGG | + | chr7_3:20250890-20250909 | Msa1096180:intron | 40.0% | |
| ! | TATCGGCTATTTGAGAACAC+TGG | + | chr7_3:20250907-20250926 | Msa1096180:intron | 40.0% |
| ATAAAAGTTCAGCCGGATGA+AGG | + | chr7_3:20251092-20251111 | Msa1096180:CDS | 40.0% | |
| GAGAACATCTCATTATGGCT+TGG | + | chr7_3:20251267-20251286 | Msa1096180:intron | 40.0% | |
| AATGCGGAATGTTGAAGTTG+TGG | - | chr7_3:20251540-20251559 | None:intergenic | 40.0% | |
| AGATACCAGATGCTTATGAG+AGG | + | chr7_3:20251739-20251758 | Msa1096180:CDS | 40.0% | |
| ACCATAAGGATAGTACTCTG+GGG | - | chr7_3:20251880-20251899 | None:intergenic | 40.0% | |
| CTACCATAAGGATAGTACTC+TGG | - | chr7_3:20251882-20251901 | None:intergenic | 40.0% | |
| TACTATCCTTATGGTAGTCG+TGG | + | chr7_3:20251885-20251904 | Msa1096180:CDS | 40.0% | |
| TGTGAGTTAGCTAACATCTG+AGG | - | chr7_3:20252017-20252036 | None:intergenic | 40.0% | |
| !! | CTAACTCACATGTCGATTTG+TGG | + | chr7_3:20252027-20252046 | Msa1096180:three_prime_UTR | 40.0% |
| TTGTCCTTCAACACCCAACA+AGG | + | chr7_3:20244558-20244577 | Msa1096180:five_prime_UTR | 45.0% | |
| TGTCCTTCAACACCCAACAA+GGG | + | chr7_3:20244559-20244578 | Msa1096180:five_prime_UTR | 45.0% | |
| !! | TTTCCCTTGTTGGGTGTTGA+AGG | - | chr7_3:20244565-20244584 | None:intergenic | 45.0% |
| TTCAACACCCAACAAGGGAA+AGG | + | chr7_3:20244564-20244583 | Msa1096180:five_prime_UTR | 45.0% | |
| TCAACACCCAACAAGGGAAA+GGG | + | chr7_3:20244565-20244584 | Msa1096180:five_prime_UTR | 45.0% | |
| AGACTCTTGAGATCTCCGAA+GGG | - | chr7_3:20244604-20244623 | None:intergenic | 45.0% | |
| AAGACTCTTGAGATCTCCGA+AGG | - | chr7_3:20244605-20244624 | None:intergenic | 45.0% | |
| GAGAGAGTTCGGAAAAAACG+AGG | - | chr7_3:20244659-20244678 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGTT+CGG | - | chr7_3:20244670-20244689 | None:intergenic | 45.0% | |
| ACCATTGAAATGGGGTGTAG+TGG | + | chr7_3:20245181-20245200 | Msa1096180:intron | 45.0% | |
| CCATTGAAATGGGGTGTAGT+GGG | + | chr7_3:20245182-20245201 | Msa1096180:intron | 45.0% | |
| CATTGAAATGGGGTGTAGTG+GGG | + | chr7_3:20245183-20245202 | Msa1096180:intron | 45.0% | |
| AATAGTGCACTAGGCATGTC+AGG | + | chr7_3:20245357-20245376 | Msa1096180:intron | 45.0% | |
| TGTTCATCCAAACAGAGCCT+AGG | + | chr7_3:20245933-20245952 | Msa1096180:intron | 45.0% | |
| !! | CCACTATGGCTGTTTTCAAC+AGG | - | chr7_3:20246433-20246452 | None:intergenic | 45.0% |
| CCTGTTGAAAACAGCCATAG+TGG | + | chr7_3:20246430-20246449 | Msa1096180:CDS | 45.0% | |
| AAAACAGCCATAGTGGCAAG+CGG | + | chr7_3:20246437-20246456 | Msa1096180:CDS | 45.0% | |
| TGGCAGCATTTCACCATTTG+TGG | + | chr7_3:20246736-20246755 | Msa1096180:intron | 45.0% | |
| GCCATGGCAGATATTGTTGA+CGG | + | chr7_3:20247143-20247162 | Msa1096180:intron | 45.0% | |
| CCATGGCAGATATTGTTGAC+GGG | + | chr7_3:20247144-20247163 | Msa1096180:intron | 45.0% | |
| ! | GCCAATTTTGTGAAGGATGG+CGG | + | chr7_3:20247180-20247199 | Msa1096180:intron | 45.0% |
| ! | CAAACCAACGTTGTTGATGG+CGG | - | chr7_3:20247272-20247291 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_3:20247631-20247650 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7_3:20247631-20247650 | Msa1096180:intron | 45.0% |
| GTCAAATGAGCACAATCACG+TGG | - | chr7_3:20247997-20248016 | None:intergenic | 45.0% | |
| GCACCAGATAAGGTTCTATG+TGG | + | chr7_3:20248583-20248602 | Msa1096180:intron | 45.0% | |
| TGTGGGTAGCATACACATGT+TGG | + | chr7_3:20248601-20248620 | Msa1096180:intron | 45.0% | |
| !! | CGTGTTGTTGCTAGTCTTTC+TGG | + | chr7_3:20248887-20248906 | Msa1096180:intron | 45.0% |
| TCAAGCTTGTCAGCATCTTC+TGG | + | chr7_3:20249319-20249338 | Msa1096180:intron | 45.0% | |
| CAAGCTTGTCAGCATCTTCT+GGG | + | chr7_3:20249320-20249339 | Msa1096180:intron | 45.0% | |
| ! | TTGTCAGCATCTTCTGGGAA+TGG | + | chr7_3:20249325-20249344 | Msa1096180:intron | 45.0% |
| GATTCTGAATCACGGCCAAA+AGG | - | chr7_3:20249379-20249398 | None:intergenic | 45.0% | |
| CAGCTGAGGATTCTGAATCA+CGG | - | chr7_3:20249387-20249406 | None:intergenic | 45.0% | |
| ATGTATTGCCTCGACCACAA+AGG | - | chr7_3:20249887-20249906 | None:intergenic | 45.0% | |
| TGAATGCTGCAAAGGAAGAG+AGG | - | chr7_3:20249968-20249987 | None:intergenic | 45.0% | |
| AGGGGTTTCCATTGCAAAGA+GGG | - | chr7_3:20250113-20250132 | None:intergenic | 45.0% | |
| CTCTGCATCCAAACTAACAG+GGG | - | chr7_3:20250131-20250150 | None:intergenic | 45.0% | |
| CCTCTGCATCCAAACTAACA+GGG | - | chr7_3:20250132-20250151 | None:intergenic | 45.0% | |
| TCCTCTGCATCCAAACTAAC+AGG | - | chr7_3:20250133-20250152 | None:intergenic | 45.0% | |
| GGTTGAACTAAACCACCCAA+AGG | - | chr7_3:20250357-20250376 | None:intergenic | 45.0% | |
| ! | GCTTAATGGATGTCAGGTCA+AGG | + | chr7_3:20250462-20250481 | Msa1096180:intron | 45.0% |
| !! | GGAAAGCATTACACACCAAG+AGG | + | chr7_3:20250686-20250705 | Msa1096180:intron | 45.0% |
| AAGTCTGCACTATATCGTGG+TGG | - | chr7_3:20250881-20250900 | None:intergenic | 45.0% | |
| TTGGATTCAGAGCCGAGATA+CGG | + | chr7_3:20250988-20251007 | Msa1096180:intron | 45.0% | |
| TTCCGATTGTACAGATTGCC+CGG | - | chr7_3:20251032-20251051 | None:intergenic | 45.0% | |
| ACCAGGGTTAGGAATGAAGT+TGG | + | chr7_3:20251142-20251161 | Msa1096180:CDS | 45.0% | |
| TCCAACTTCATTCCTAACCC+TGG | - | chr7_3:20251146-20251165 | None:intergenic | 45.0% | |
| AGCAACCTCTCATAAGCATC+TGG | - | chr7_3:20251747-20251766 | None:intergenic | 45.0% | |
| ! | ACCCCAGAGTACTATCCTTA+TGG | + | chr7_3:20251876-20251895 | Msa1096180:CDS | 45.0% |
| GCAAGATAGTGAGCACAAAC+CGG | - | chr7_3:20251912-20251931 | None:intergenic | 45.0% | |
| GGTTTGTGCTCACTATCTTG+CGG | + | chr7_3:20251911-20251930 | Msa1096180:CDS | 45.0% | |
| ! | TAACATCTGAGGCTGATCAC+AGG | - | chr7_3:20252006-20252025 | None:intergenic | 45.0% |
| !! | TTTGGTTTGGTGGAGGGAAT+TGG | + | chr7_3:20252190-20252209 | Msa1096180:three_prime_UTR | 45.0% |
| !! | TTGGTTTGGTGGAGGGAATT+GGG | + | chr7_3:20252191-20252210 | Msa1096180:three_prime_UTR | 45.0% |
| !! | ATATTATTTCATAAAATATT+GGG | - | chr7_3:20245970-20245989 | None:intergenic | 5.0% |
| !! | AATATTATTTCATAAAATAT+TGG | - | chr7_3:20245971-20245990 | None:intergenic | 5.0% |
| GCTTGTCCCTTTCCCTTGTT+GGG | - | chr7_3:20244574-20244593 | None:intergenic | 50.0% | |
| CCCACTACACCCCATTTCAA+TGG | - | chr7_3:20245185-20245204 | None:intergenic | 50.0% | |
| !! | CAGTATCGGTGGTGTCATGT+TGG | - | chr7_3:20245392-20245411 | None:intergenic | 50.0% |
| TCTGTGTGTTGTGTCGTGTC+TGG | + | chr7_3:20245497-20245516 | Msa1096180:intron | 50.0% | |
| ! | AGGGGTTACATTGGCTGCAA+CGG | - | chr7_3:20246413-20246432 | None:intergenic | 50.0% |
| CTTCTTAGCAAGGTCTCCAG+AGG | - | chr7_3:20246569-20246588 | None:intergenic | 50.0% | |
| CTATGAGGGTTGTCTGCCTA+AGG | + | chr7_3:20246618-20246637 | Msa1096180:CDS | 50.0% | |
| CCCGTCAACAATATCTGCCA+TGG | - | chr7_3:20247147-20247166 | None:intergenic | 50.0% | |
| GCCGCCATCCTTCACAAAAT+TGG | - | chr7_3:20247184-20247203 | None:intergenic | 50.0% | |
| ATCTCCGCCATCAACAACGT+TGG | + | chr7_3:20247265-20247284 | Msa1096180:intron | 50.0% | |
| AATGAGCACAATCACGTGGC+AGG | - | chr7_3:20247993-20248012 | None:intergenic | 50.0% | |
| AACATCGGGACACGCATAAC+CGG | + | chr7_3:20248639-20248658 | Msa1096180:intron | 50.0% | |
| TATTAGCACAGACACCTGGC+CGG | - | chr7_3:20248661-20248680 | None:intergenic | 50.0% | |
| ! | GCACAGTGGAGAGCATACAT+AGG | - | chr7_3:20249048-20249067 | None:intergenic | 50.0% |
| ! | TCAGCATCTTCTGGGAATGG+TGG | + | chr7_3:20249328-20249347 | Msa1096180:intron | 50.0% |
| ! | CATCTTCTGGGAATGGTGGT+TGG | + | chr7_3:20249332-20249351 | Msa1096180:intron | 50.0% |
| ACTCAAGCAGTATCTGACCG+AGG | + | chr7_3:20249420-20249439 | Msa1096180:intron | 50.0% | |
| !! | GATTTTGGTACCGAAGGACG+TGG | + | chr7_3:20249935-20249954 | Msa1096180:CDS | 50.0% |
| CAGGGGTTTCCATTGCAAAG+AGG | - | chr7_3:20250114-20250133 | None:intergenic | 50.0% | |
| ! | CCCTGTTAGTTTGGATGCAG+AGG | + | chr7_3:20250129-20250148 | Msa1096180:intron | 50.0% |
| !! | TCTCTGAGGCATAGCTCAAG+TGG | - | chr7_3:20250378-20250397 | None:intergenic | 50.0% |
| AGCTATGCCTCAGAGACTCA+TGG | + | chr7_3:20250382-20250401 | Msa1096180:intron | 50.0% | |
| ATGCAACACCTCCTCTTGTG+TGG | - | chr7_3:20250546-20250565 | None:intergenic | 50.0% | |
| CACACCAAGAGGTAAGTGAG+AGG | + | chr7_3:20250697-20250716 | Msa1096180:intron | 50.0% | |
| CTACAGCACTGTACGCATAG+CGG | - | chr7_3:20250783-20250802 | None:intergenic | 50.0% | |
| CGGAAGTCTGCACTATATCG+TGG | - | chr7_3:20250884-20250903 | None:intergenic | 50.0% | |
| TGGATTCAGAGCCGAGATAC+GGG | + | chr7_3:20250989-20251008 | Msa1096180:intron | 50.0% | |
| CCTGAACTGTACCCGTATCT+CGG | - | chr7_3:20251003-20251022 | None:intergenic | 50.0% | |
| ! | GGTACAGTTCAGGAAAGTGC+CGG | + | chr7_3:20251010-20251029 | Msa1096180:intron | 50.0% |
| !! | GTACAGTTCAGGAAAGTGCC+GGG | + | chr7_3:20251011-20251030 | Msa1096180:intron | 50.0% |
| TGCCGGGCAATCTGTACAAT+CGG | + | chr7_3:20251027-20251046 | Msa1096180:CDS | 50.0% | |
| ATTCCCGCCACACATGATCA+TGG | + | chr7_3:20251589-20251608 | Msa1096180:intron | 50.0% | |
| ACGACCATGATCATGTGTGG+CGG | - | chr7_3:20251596-20251615 | None:intergenic | 50.0% | |
| TGCACGACCATGATCATGTG+TGG | - | chr7_3:20251599-20251618 | None:intergenic | 50.0% | |
| GTGATGAACTCGATGCTGCT+TGG | + | chr7_3:20251808-20251827 | Msa1096180:CDS | 50.0% | |
| TCCTTATGGTAGTCGTGGTC+CGG | + | chr7_3:20251890-20251909 | Msa1096180:CDS | 50.0% | |
| GGCCAGATACAACGTACGAT+GGG | + | chr7_3:20251932-20251951 | Msa1096180:CDS | 50.0% | |
| GCCAGATACAACGTACGATG+GGG | + | chr7_3:20251933-20251952 | Msa1096180:CDS | 50.0% | |
| ACCCCATCGTACGTTGTATC+TGG | - | chr7_3:20251937-20251956 | None:intergenic | 50.0% | |
| !! | TGGTTTGGTGGAGGGAATTG+GGG | + | chr7_3:20252192-20252211 | Msa1096180:three_prime_UTR | 50.0% |
| GGCTTGTCCCTTTCCCTTGT+TGG | - | chr7_3:20244575-20244594 | None:intergenic | 55.0% | |
| ! | TGGGGTGTAGTGGGGTGATT+TGG | + | chr7_3:20245191-20245210 | Msa1096180:intron | 55.0% |
| GTTGCAACCGCTTGCCACTA+TGG | - | chr7_3:20246447-20246466 | None:intergenic | 55.0% | |
| GAGGGTTGTCTGCCTAAGGT+TGG | + | chr7_3:20246622-20246641 | Msa1096180:intron | 55.0% | |
| ! | TGTGAAGGATGGCGGCATCT+TGG | + | chr7_3:20247188-20247207 | Msa1096180:intron | 55.0% |
| CTTGGCGCCATACTCGGATA+TGG | + | chr7_3:20247206-20247225 | Msa1096180:intron | 55.0% | |
| GGCACTGCCATATCCGAGTA+TGG | - | chr7_3:20247216-20247235 | None:intergenic | 55.0% | |
| ! | TTTGGTACCGAAGGACGTGG+CGG | + | chr7_3:20249938-20249957 | Msa1096180:CDS | 55.0% |
| CTTAACCCCGACATTTGCCG+CGG | + | chr7_3:20250606-20250625 | Msa1096180:CDS | 55.0% | |
| ATCTATGAAGAGGGCAGCCG+CGG | - | chr7_3:20250626-20250645 | None:intergenic | 55.0% | |
| CCGAGATACGGGTACAGTTC+AGG | + | chr7_3:20251000-20251019 | Msa1096180:intron | 55.0% | |
| ! | GATCATGTGTGGCGGGAATG+AGG | - | chr7_3:20251588-20251607 | None:intergenic | 55.0% |
| CGACCATGATCATGTGTGGC+GGG | - | chr7_3:20251595-20251614 | None:intergenic | 55.0% | |
| ACCGGACCACGACTACCATA+AGG | - | chr7_3:20251894-20251913 | None:intergenic | 55.0% | |
| CGGCCAGATACAACGTACGA+TGG | + | chr7_3:20251931-20251950 | Msa1096180:CDS | 55.0% | |
| AACGTACGATGGGGTGACCT+TGG | + | chr7_3:20251942-20251961 | Msa1096180:CDS | 55.0% | |
| TTTGGTGGAGGGAATTGGGG+TGG | + | chr7_3:20252195-20252214 | Msa1096180:three_prime_UTR | 55.0% | |
| GGACAAGCCAAGCAGCCCTT+CGG | + | chr7_3:20244586-20244605 | Msa1096180:five_prime_UTR | 60.0% | |
| GAGATCTCCGAAGGGCTGCT+TGG | - | chr7_3:20244596-20244615 | None:intergenic | 60.0% | |
| GGGTCTGCTCGTGTAGTTCG+TGG | + | chr7_3:20247048-20247067 | Msa1096180:intron | 60.0% | |
| CGGCATCTTGGCGCCATACT+CGG | + | chr7_3:20247200-20247219 | Msa1096180:intron | 60.0% | |
| ! | TTGGTACCGAAGGACGTGGC+GGG | + | chr7_3:20249939-20249958 | Msa1096180:CDS | 60.0% |
| AGGTTACCCGCCACGTCCTT+CGG | - | chr7_3:20249948-20249967 | None:intergenic | 60.0% | |
| GTCGGGGTTAAGCTGCCCTT+TGG | - | chr7_3:20250598-20250617 | None:intergenic | 60.0% | |
| TATTGGCCATGGCGGCGCCA+TGG | + | chr7_3:20247127-20247146 | Msa1096180:intron | 65.0% | |
| TATCTGCCATGGCGCCGCCA+TGG | - | chr7_3:20247136-20247155 | None:intergenic | 65.0% | |
| AGGGCAGCCGCGGCAAATGT+CGG | - | chr7_3:20250616-20250635 | None:intergenic | 65.0% | |
| CGGGACACGCATAACCGGCC+AGG | + | chr7_3:20248644-20248663 | Msa1096180:intron | 70.0% | |
| GGCAGCCGCGGCAAATGTCG+GGG | - | chr7_3:20250614-20250633 | None:intergenic | 70.0% | |
| GGGCAGCCGCGGCAAATGTC+GGG | - | chr7_3:20250615-20250634 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 20244545 | 20252338 | 20244545 | ID=Msa1096180;Name=Msa1096180 |
| chr7_3 | mRNA | 20244545 | 20252338 | 20244545 | ID=Msa1096180-mRNA-1;Parent=Msa1096180;Name=Msa1096180-mRNA-1;_AED=0.21;_eAED=0.21;_QI=198|0.55|0.5|1|0.88|0.8|10|355|471 |
| chr7_3 | exon | 20244545 | 20244829 | 20244545 | ID=Msa1096180-mRNA-1:exon:4328;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20244930 | 20245026 | 20244930 | ID=Msa1096180-mRNA-1:exon:4329;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20246407 | 20246639 | 20246407 | ID=Msa1096180-mRNA-1:exon:4330;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20246742 | 20246801 | 20246742 | ID=Msa1096180-mRNA-1:exon:4331;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20249247 | 20249326 | 20249247 | ID=Msa1096180-mRNA-1:exon:4332;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20249811 | 20249960 | 20249811 | ID=Msa1096180-mRNA-1:exon:4333;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20250048 | 20250132 | 20250048 | ID=Msa1096180-mRNA-1:exon:4334;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20250478 | 20250663 | 20250478 | ID=Msa1096180-mRNA-1:exon:4335;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20251017 | 20251198 | 20251017 | ID=Msa1096180-mRNA-1:exon:4336;Parent=Msa1096180-mRNA-1 |
| chr7_3 | exon | 20251728 | 20252338 | 20251728 | ID=Msa1096180-mRNA-1:exon:4337;Parent=Msa1096180-mRNA-1 |
| chr7_3 | five_prime_UTR | 20244545 | 20244742 | 20244545 | ID=Msa1096180-mRNA-1:five_prime_utr;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20244743 | 20244829 | 20244743 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20244930 | 20245026 | 20244930 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20246407 | 20246639 | 20246407 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20246742 | 20246801 | 20246742 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20249247 | 20249326 | 20249247 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20249811 | 20249960 | 20249811 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20250048 | 20250132 | 20250048 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20250478 | 20250663 | 20250478 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20251017 | 20251198 | 20251017 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | CDS | 20251728 | 20251983 | 20251728 | ID=Msa1096180-mRNA-1:cds;Parent=Msa1096180-mRNA-1 |
| chr7_3 | three_prime_UTR | 20251984 | 20252338 | 20251984 | ID=Msa1096180-mRNA-1:three_prime_utr;Parent=Msa1096180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
