Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052380 | XP_003621754.2 | 86.412 | 655 | 28 | 5 | 1 | 652 | 1 | 597 | 0.0 | 1136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052380 | sp|Q9FY99|G6PD2_ARATH | 73.480 | 592 | 96 | 6 | 59 | 649 | 64 | 595 | 0.0 | 870 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052380 | G7KUS5 | 86.412 | 655 | 28 | 5 | 1 | 652 | 1 | 597 | 0.0 | 1136 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036610 | Msa1052380 | 0.816806 | 4.574326e-52 | -8.615850e-47 |
| Msa1010820 | Msa1052380 | 0.951619 | 1.392423e-109 | -8.615850e-47 |
| Msa1052380 | Msa1096180 | 0.885135 | 1.055371e-71 | -8.615850e-47 |
| Msa0318600 | Msa1052380 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052380 | MtrunA17_Chr7g0222441 | 86.412 | 655 | 28 | 5 | 1 | 652 | 1 | 597 | 0.0 | 1136 |
| Msa1052380 | MtrunA17_Chr8g0341321 | 68.159 | 603 | 127 | 4 | 47 | 649 | 44 | 581 | 0.0 | 813 |
| Msa1052380 | MtrunA17_Chr7g0271531 | 47.689 | 541 | 215 | 6 | 103 | 643 | 126 | 598 | 6.20e-173 | 506 |
| Msa1052380 | MtrunA17_Chr7g0228611 | 46.593 | 543 | 209 | 9 | 105 | 638 | 29 | 499 | 9.55e-154 | 454 |
| Msa1052380 | MtrunA17_Chr6g0458971 | 50.000 | 416 | 185 | 5 | 231 | 638 | 102 | 502 | 3.10e-136 | 409 |
| Msa1052380 | MtrunA17_Chr8g0356781 | 77.928 | 222 | 44 | 1 | 431 | 647 | 1 | 222 | 9.13e-125 | 368 |
| Msa1052380 | MtrunA17_Chr8g0358431 | 87.368 | 190 | 24 | 0 | 294 | 483 | 16 | 205 | 4.22e-117 | 348 |
| Msa1052380 | MtrunA17_Chr8g0356771 | 78.667 | 150 | 18 | 1 | 294 | 429 | 16 | 165 | 1.78e-75 | 239 |
| Msa1052380 | MtrunA17_Chr8g0356701 | 86.792 | 106 | 14 | 0 | 396 | 501 | 1 | 106 | 7.05e-60 | 196 |
| Msa1052380 | MtrunA17_Chr8g0358411 | 81.915 | 94 | 17 | 0 | 554 | 647 | 1 | 94 | 7.14e-49 | 166 |
| Msa1052380 | MtrunA17_Chr4g0044781 | 65.789 | 76 | 23 | 1 | 495 | 567 | 4 | 79 | 1.47e-27 | 106 |
| Msa1052380 | MtrunA17_Chr8g0338031 | 48.193 | 83 | 35 | 1 | 166 | 248 | 320 | 394 | 6.60e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052380 | AT5G13110.1 | 73.480 | 592 | 96 | 6 | 59 | 649 | 64 | 595 | 0.0 | 870 |
| Msa1052380 | AT1G24280.1 | 71.405 | 612 | 112 | 5 | 38 | 649 | 50 | 598 | 0.0 | 860 |
| Msa1052380 | AT5G35790.1 | 69.858 | 564 | 110 | 5 | 84 | 647 | 71 | 574 | 0.0 | 798 |
| Msa1052380 | AT1G09420.1 | 44.821 | 560 | 240 | 6 | 86 | 645 | 134 | 624 | 4.77e-164 | 484 |
| Msa1052380 | AT1G09420.2 | 43.860 | 570 | 241 | 7 | 86 | 645 | 134 | 634 | 5.28e-160 | 474 |
| Msa1052380 | AT3G27300.1 | 44.610 | 538 | 226 | 9 | 105 | 638 | 31 | 500 | 6.33e-148 | 439 |
| Msa1052380 | AT3G27300.3 | 44.610 | 538 | 226 | 9 | 105 | 638 | 31 | 500 | 6.33e-148 | 439 |
| Msa1052380 | AT3G27300.2 | 44.610 | 538 | 226 | 9 | 105 | 638 | 31 | 500 | 6.33e-148 | 439 |
| Msa1052380 | AT3G27300.4 | 44.203 | 552 | 232 | 10 | 95 | 638 | 88 | 571 | 4.54e-147 | 439 |
| Msa1052380 | AT3G27300.5 | 44.610 | 538 | 226 | 9 | 105 | 638 | 85 | 554 | 5.36e-147 | 439 |
| Msa1052380 | AT5G40760.2 | 50.360 | 417 | 184 | 5 | 230 | 638 | 98 | 499 | 1.10e-138 | 415 |
| Msa1052380 | AT5G40760.1 | 50.360 | 417 | 184 | 5 | 230 | 638 | 98 | 499 | 1.10e-138 | 415 |
Find 171 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGTGTGGTTCTTATAT+TGG | 0.193945 | 7_2:-20602809 | None:intergenic |
| AATCTGTACAATCGGAATTT+TGG | 0.208150 | 7_2:+20603313 | Msa1052380:CDS |
| TTGATATTCTCAGAAGATTT+TGG | 0.217136 | 7_2:+20602199 | Msa1052380:CDS |
| ACAGCATCTATGAATATATT+AGG | 0.222301 | 7_2:-20601567 | None:intergenic |
| TTTGGTTTGGTGGAGGGAAT+TGG | 0.226826 | 7_2:+20604471 | Msa1052380:three_prime_UTR |
| TCAAGCTTGTCAGCATCTTC+TGG | 0.245037 | 7_2:+20601597 | Msa1052380:CDS |
| TGTAGGTACTTTGACAATTA+TGG | 0.250023 | 7_2:+20602321 | Msa1052380:intron |
| AAAAGATGTTTCTATCATTC+TGG | 0.258419 | 7_2:+20600232 | Msa1052380:CDS |
| GCCGCCATCCTTCACAAAAT+TGG | 0.263493 | 7_2:-20599663 | None:intergenic |
| TGCTGGAAATATCTTCTTCT+TGG | 0.264980 | 7_2:-20599057 | None:intergenic |
| TTGGTTTGGTGGAGGGAATT+GGG | 0.271768 | 7_2:+20604472 | Msa1052380:three_prime_UTR |
| GTCTTGTCCCTTTCCCTTGT+TGG | 0.276119 | 7_2:-20597167 | None:intergenic |
| TGATTCAGGTTGTCAAATAT+TGG | 0.286632 | 7_2:+20599586 | Msa1052380:intron |
| CCATTACTCAATCACTATTA+TGG | 0.287622 | 7_2:+20597316 | Msa1052380:exon |
| TCCTCTGCATCCAAACTAAC+AGG | 0.311717 | 7_2:-20602408 | None:intergenic |
| AGATATTGTTGACGGGCTTT+TGG | 0.313374 | 7_2:+20599627 | Msa1052380:CDS |
| GTCATTGTTGAAAAGCCTTT+TGG | 0.318392 | 7_2:+20601639 | Msa1052380:CDS |
| TTGATTTGTGGTTTCTTGTT+TGG | 0.326043 | 7_2:+20604318 | Msa1052380:three_prime_UTR |
| CTGACATACAGGCCGAAATA+TGG | 0.335017 | 7_2:-20599716 | None:intergenic |
| TCTTGTCCCTTTCCCTTGTT+GGG | 0.352513 | 7_2:-20597166 | None:intergenic |
| CTAGCTCACATGTTGATTTG+TGG | 0.354772 | 7_2:+20604306 | Msa1052380:three_prime_UTR |
| GGGCAGCCGCGGCAAATGTC+GGG | 0.355148 | 7_2:-20602890 | None:intergenic |
| CAGGTTTCAGTTCATGTTGA+TGG | 0.358737 | 7_2:+20597491 | Msa1052380:CDS |
| CCGAGATACGGGTACAGTTC+AGG | 0.377664 | 7_2:+20603278 | Msa1052380:CDS |
| GATAAAACCGACAATAATTC+AGG | 0.379602 | 7_2:-20598942 | None:intergenic |
| ACCCCAGAGTACTATCCTTA+TGG | 0.387489 | 7_2:+20604155 | Msa1052380:CDS |
| TCAACACAATTTGTTACAAC+AGG | 0.388413 | 7_2:+20597472 | Msa1052380:CDS |
| ATAACTGTTGTTGGAGCCTC+TGG | 0.390269 | 7_2:+20599026 | Msa1052380:CDS |
| TTCAAATAAATACCTTCATC+CGG | 0.391157 | 7_2:-20603382 | None:intergenic |
| TACAGGATCGATCACTATCT+TGG | 0.401089 | 7_2:+20602085 | Msa1052380:intron |
| ATCTTGAAATTGTATGACTT+TGG | 0.401663 | 7_2:+20604559 | Msa1052380:three_prime_UTR |
| AATGGAAACCCCTGTTAGTT+TGG | 0.405110 | 7_2:+20602398 | Msa1052380:CDS |
| CTATGAGGGTTGTCTGCCTA+AGG | 0.408589 | 7_2:+20599094 | Msa1052380:CDS |
| CTTGGCGCCATACTCGGATA+TGG | 0.409771 | 7_2:+20599688 | Msa1052380:CDS |
| AACGTACGATGGGGCGACCT+TGG | 0.409795 | 7_2:+20604221 | Msa1052380:CDS |
| ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 7_2:-20602780 | None:intergenic |
| GATATGGCAGTGCCATATTT+CGG | 0.415232 | 7_2:+20599704 | Msa1052380:CDS |
| TGATTGAGTAATGGAGGAAA+AGG | 0.420049 | 7_2:-20597307 | None:intergenic |
| GGCACTGCCATATCCGAGTA+TGG | 0.423840 | 7_2:-20599695 | None:intergenic |
| TGGCAGCATTTCACCATTTG+TGG | 0.426179 | 7_2:+20599212 | Msa1052380:intron |
| AGAGTATGGCATAGTAATAT+TGG | 0.429299 | 7_2:+20604360 | Msa1052380:three_prime_UTR |
| GTTGCAACCGCTTGCCACTA+TGG | 0.429986 | 7_2:-20598920 | None:intergenic |
| TGTGAAGGATGGCGGCATCT+TGG | 0.438769 | 7_2:+20599670 | Msa1052380:CDS |
| TTGCTTCTTGATGCAATTGA+AGG | 0.439881 | 7_2:+20604041 | Msa1052380:CDS |
| TCCTTATGGTAGTCGTGGTC+CGG | 0.442639 | 7_2:+20604169 | Msa1052380:CDS |
| CAAGCTTGTCAGCATCTTCT+GGG | 0.450107 | 7_2:+20601598 | Msa1052380:CDS |
| CATCTTCTGGGAATGGTGGT+TGG | 0.452748 | 7_2:+20601610 | Msa1052380:CDS |
| AGCAACCTCTCATAAGCATC+TGG | 0.454571 | 7_2:-20604023 | None:intergenic |
| TGCCGGGCAATCTGTACAAT+CGG | 0.462688 | 7_2:+20603305 | Msa1052380:CDS |
| TTACCTCTTATCAATTCTAC+AGG | 0.462844 | 7_2:-20599294 | None:intergenic |
| GTCTTCAACTTTAGATTCCA+TGG | 0.463512 | 7_2:-20598967 | None:intergenic |
| GTCGGGGTTAAGCTGCCCTT+TGG | 0.467588 | 7_2:-20602873 | None:intergenic |
| GATTGAGTAATGGAGGAAAA+GGG | 0.472412 | 7_2:-20597306 | None:intergenic |
| AGTTGAAGACGGTGTTGAAA+AGG | 0.473134 | 7_2:+20598980 | Msa1052380:CDS |
| TGATGCAGAACTGAGAAATA+TGG | 0.475269 | 7_2:+20599256 | Msa1052380:CDS |
| AGAGAATTGCAGTGAAAAGA+TGG | 0.476438 | 7_2:+20600198 | Msa1052380:CDS |
| GAGGAATTGAAAGATAAAAC+AGG | 0.478809 | 7_2:-20601545 | None:intergenic |
| AGGGGTTTCCATTGCAAAGA+GGG | 0.478932 | 7_2:-20602388 | None:intergenic |
| AGGTTACCCGCCACGTCCTT+CGG | 0.484081 | 7_2:-20602224 | None:intergenic |
| TTCCGATTGTACAGATTGCC+CGG | 0.484990 | 7_2:-20603307 | None:intergenic |
| CTCTTCTATCTCATTCAACA+CGG | 0.486759 | 7_2:-20604123 | None:intergenic |
| TACCATAAGGATAGTACTCT+GGG | 0.486791 | 7_2:-20604157 | None:intergenic |
| TTCTGGCCAATATGATTCTC+CGG | 0.488197 | 7_2:+20600249 | Msa1052380:CDS |
| AAACAGTAGCAGCAAGAAAA+CGG | 0.488875 | 7_2:-20597439 | None:intergenic |
| TTGGATTCAGAGCCGAGATA+CGG | 0.488957 | 7_2:+20603266 | Msa1052380:intron |
| CGGCATCTTGGCGCCATACT+CGG | 0.490838 | 7_2:+20599682 | Msa1052380:CDS |
| ACTGTTAGTATAACTGTTGT+TGG | 0.491948 | 7_2:+20599017 | Msa1052380:CDS |
| ACTTCGAGCATAACCACAAA+TGG | 0.497023 | 7_2:-20599225 | None:intergenic |
| TTACCTGTAGAATTGATAAG+AGG | 0.497788 | 7_2:+20599291 | Msa1052380:CDS |
| CTTCATAGATAATGCAAGAT+GGG | 0.499428 | 7_2:+20602914 | Msa1052380:CDS |
| CCTGAACTGTACCCGTATCT+CGG | 0.502242 | 7_2:-20603278 | None:intergenic |
| AGAGGACATTAGAAATGAAA+AGG | 0.504615 | 7_2:+20602425 | Msa1052380:CDS |
| TAGAGAAAGTAACAGCAGAT+TGG | 0.506304 | 7_2:-20597415 | None:intergenic |
| AGTAACAGCAGATTGGTTAG+AGG | 0.507490 | 7_2:-20597408 | None:intergenic |
| CTACCATAAGGATAGTACTC+TGG | 0.507992 | 7_2:-20604158 | None:intergenic |
| TATCTGCCATGGCGCCGCCA+TGG | 0.513064 | 7_2:-20599609 | None:intergenic |
| CCCTGTTAGTTTGGATGCAG+AGG | 0.514673 | 7_2:+20602407 | Msa1052380:CDS |
| GGAAACGAAGAAGAAGAAGA+AGG | 0.515914 | 7_2:-20597371 | None:intergenic |
| TTTGGTGGAGGGAATTGGGA+TGG | 0.516090 | 7_2:+20604476 | Msa1052380:three_prime_UTR |
| TTAGAGGACAAAGAAGAAGA+TGG | 0.516185 | 7_2:-20597392 | None:intergenic |
| TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 7_2:+20602919 | Msa1052380:CDS |
| ACCAGGGTTAGGAATGAAGT+TGG | 0.519128 | 7_2:+20603420 | Msa1052380:CDS |
| TATTGGCCATGGCGGCGCCA+TGG | 0.520158 | 7_2:+20599603 | Msa1052380:CDS |
| CATAGTAATATTGGTATGGT+AGG | 0.520610 | 7_2:+20604369 | Msa1052380:three_prime_UTR |
| AGGGCAGCCGCGGCAAATGT+CGG | 0.521873 | 7_2:-20602891 | None:intergenic |
| GCAAGATAGTGAGCACAAAC+CGG | 0.522419 | 7_2:-20604188 | None:intergenic |
| AACAACAAAATACCAGGGTT+AGG | 0.522580 | 7_2:+20603409 | Msa1052380:CDS |
| AAACCTGAAAATTTGATCCT+CGG | 0.524458 | 7_2:-20601715 | None:intergenic |
| GATTCTGAATCACGACCAAA+AGG | 0.526905 | 7_2:-20601654 | None:intergenic |
| ATAAAAGTTCAGCCGGATGA+AGG | 0.527613 | 7_2:+20603370 | Msa1052380:CDS |
| CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 7_2:+20602099 | Msa1052380:CDS |
| GTTGCAACCTGAATTATTGT+CGG | 0.530202 | 7_2:+20598935 | Msa1052380:CDS |
| TTGGTACCGAAGGACGTGGC+GGG | 0.530531 | 7_2:+20602218 | Msa1052380:CDS |
| TGGATTCAGAGCCGAGATAC+GGG | 0.534980 | 7_2:+20603267 | Msa1052380:intron |
| ACCGGACCACGACTACCATA+AGG | 0.535565 | 7_2:-20604170 | None:intergenic |
| AATACTAACCCTCTTTGCAA+TGG | 0.536733 | 7_2:+20602380 | Msa1052380:CDS |
| ATGTGAGAGGAAGAAGAAGA+AGG | 0.536775 | 7_2:-20597229 | None:intergenic |
| TTGTCAGCATCTTCTGGGAA+TGG | 0.537525 | 7_2:+20601603 | Msa1052380:CDS |
| GGACAAGACAAGCAGCCCTT+CGG | 0.538759 | 7_2:+20597181 | Msa1052380:five_prime_UTR |
| ACTTGTTATAAAAGTTCAGC+CGG | 0.538788 | 7_2:+20603363 | Msa1052380:CDS |
| GCCATGGCAGATATTGTTGA+CGG | 0.539649 | 7_2:+20599619 | Msa1052380:CDS |
| GAAATATCTTCTTCTTGGCA+AGG | 0.541350 | 7_2:-20599052 | None:intergenic |
| ATGGCATAGTAATATTGGTA+TGG | 0.546283 | 7_2:+20604365 | Msa1052380:three_prime_UTR |
| TCAACACCCAACAAGGGAAA+GGG | 0.548764 | 7_2:+20597160 | None:intergenic |
| TTCAACACCCAACAAGGGAA+AGG | 0.549303 | 7_2:+20597159 | None:intergenic |
| ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 7_2:+20602918 | Msa1052380:CDS |
| ATTTGTAGCATGATCAAGAT+CGG | 0.550956 | 7_2:-20603338 | None:intergenic |
| CCATGGCAGATATTGTTGAC+GGG | 0.551679 | 7_2:+20599620 | Msa1052380:CDS |
| GGTACAGTTCAGGAAAGTGC+CGG | 0.553447 | 7_2:+20603288 | Msa1052380:CDS |
| AAAATCAACAACAAAATACC+AGG | 0.554633 | 7_2:+20603403 | Msa1052380:CDS |
| TACTATCCTTATGGTAGTCG+TGG | 0.555266 | 7_2:+20604164 | Msa1052380:CDS |
| GGCCAGATACAACGTACGAT+GGG | 0.556342 | 7_2:+20604211 | Msa1052380:CDS |
| TAAATCTTCATTATGCAGCA+AGG | 0.559935 | 7_2:+20603455 | Msa1052380:CDS |
| CTTCTTGGCAAGGTCTCCAG+AGG | 0.565735 | 7_2:-20599042 | None:intergenic |
| CCATAATAGTGATTGAGTAA+TGG | 0.566688 | 7_2:-20597316 | None:intergenic |
| TCTTCATAGATAATGCAAGA+TGG | 0.568560 | 7_2:+20602913 | Msa1052380:CDS |
| AGGTTGTCAAATATTGGCCA+TGG | 0.568911 | 7_2:+20599592 | Msa1052380:intron |
| AGGGGTTACATTGGCTGCAA+CGG | 0.569809 | 7_2:-20598886 | None:intergenic |
| AAGCAAACCAACGTTGCTGA+TGG | 0.570319 | 7_2:-20599754 | None:intergenic |
| TAACATCTGAGGCTGATCAC+AGG | 0.570436 | 7_2:-20604282 | None:intergenic |
| TTGTCCTTCAACACCCAACA+AGG | 0.571891 | 7_2:+20597153 | None:intergenic |
| ATCTATGAAGAGGGCAGCCG+CGG | 0.574298 | 7_2:-20602901 | None:intergenic |
| TCTTCTATCTCATTCAACAC+GGG | 0.574817 | 7_2:-20604122 | None:intergenic |
| CCCGTCAACAATATCTGCCA+TGG | 0.576405 | 7_2:-20599620 | None:intergenic |
| TCAGCATCTTCTGGGAATGG+TGG | 0.580103 | 7_2:+20601606 | Msa1052380:CDS |
| ATGCAACACCTCCTCTTGTG+TGG | 0.580289 | 7_2:-20602821 | None:intergenic |
| TGATGACAAAACTGTACCAA+AGG | 0.580864 | 7_2:+20602857 | Msa1052380:CDS |
| AAGACTCTTGAGATCTCCGA+AGG | 0.583034 | 7_2:-20597197 | None:intergenic |
| GTGATGAACTCGATGCAGCT+TGG | 0.586697 | 7_2:+20604087 | Msa1052380:CDS |
| TGTTTATTTCAGGTACTCGA+AGG | 0.589589 | 7_2:+20603995 | Msa1052380:intron |
| GATGACAAAACTGTACCAAA+GGG | 0.590628 | 7_2:+20602858 | Msa1052380:CDS |
| TGATCTTGTTAAAGCAGCTG+AGG | 0.594578 | 7_2:-20601676 | None:intergenic |
| GTACAGTTCAGGAAAGTGCC+GGG | 0.595881 | 7_2:+20603289 | Msa1052380:CDS |
| CCTGTTGAAAACAGCCATAG+TGG | 0.598255 | 7_2:+20598906 | Msa1052380:CDS |
| AGATAATGCAAGATGGGATG+GGG | 0.599941 | 7_2:+20602920 | Msa1052380:CDS |
| CCTCTGCATCCAAACTAACA+GGG | 0.600678 | 7_2:-20602407 | None:intergenic |
| ATCTTGCATTATCTATGAAG+AGG | 0.601254 | 7_2:-20602911 | None:intergenic |
| CAGGGGTTTCCATTGCAAAG+AGG | 0.602818 | 7_2:-20602389 | None:intergenic |
| TCCAACTTCATTCCTAACCC+TGG | 0.603899 | 7_2:-20603421 | None:intergenic |
| ATCCTTCACAAAATTGGCCA+TGG | 0.607281 | 7_2:-20599657 | None:intergenic |
| TAATAGTGATTGAGTAATGG+AGG | 0.608650 | 7_2:-20597313 | None:intergenic |
| GCATCTATGAATATATTAGG+AGG | 0.613908 | 7_2:-20601564 | None:intergenic |
| GGCAGCCGCGGCAAATGTCG+GGG | 0.616181 | 7_2:-20602889 | None:intergenic |
| TCTTGCATTATCTATGAAGA+GGG | 0.616374 | 7_2:-20602910 | None:intergenic |
| CTTAACCCCGACATTTGCCG+CGG | 0.616851 | 7_2:+20602884 | Msa1052380:CDS |
| CAAACCAACGTTGCTGATGG+CGG | 0.623721 | 7_2:-20599751 | None:intergenic |
| TATAAGAACCACACAAGAGG+AGG | 0.626347 | 7_2:+20602813 | Msa1052380:CDS |
| CAAGAAGCTGAATGAGCATG+AGG | 0.631993 | 7_2:+20600291 | Msa1052380:CDS |
| CAATATAAGAACCACACAAG+AGG | 0.636087 | 7_2:+20602810 | Msa1052380:CDS |
| ATGGAATCTAAAGTTGAAGA+CGG | 0.647646 | 7_2:+20598969 | Msa1052380:CDS |
| AATGAAGATTTAAATTACTG+CGG | 0.648676 | 7_2:-20603444 | None:intergenic |
| TATGAGACCGATTAAACTCG+AGG | 0.649881 | 7_2:+20602773 | Msa1052380:CDS |
| GGTTTGTGCTCACTATCTTG+CGG | 0.651306 | 7_2:+20604190 | Msa1052380:CDS |
| GGAGAAAACGAGGATGTGAG+AGG | 0.652614 | 7_2:-20597242 | None:intergenic |
| CTCTGCATCCAAACTAACAG+GGG | 0.654249 | 7_2:-20602406 | None:intergenic |
| TTTGGTACCGAAGGACGTGG+CGG | 0.661444 | 7_2:+20602217 | Msa1052380:CDS |
| GCCAGATACAACGTACGATG+GGG | 0.661518 | 7_2:+20604212 | Msa1052380:CDS |
| AAATACCAGATGCTTATGAG+AGG | 0.670335 | 7_2:+20604018 | Msa1052380:CDS |
| GGAAAGCATTACACACCAAG+AGG | 0.670420 | 7_2:+20602964 | Msa1052380:CDS |
| AAAACAGCCATAGTGGCAAG+CGG | 0.681835 | 7_2:+20598913 | Msa1052380:CDS |
| TGTGAGCTAGCTAACATCTG+AGG | 0.683822 | 7_2:-20604293 | None:intergenic |
| TTGTCAAATATTGGCCATGG+CGG | 0.683915 | 7_2:+20599595 | Msa1052380:CDS |
| ATGTATTGCCTCGACCACAA+AGG | 0.685820 | 7_2:-20602163 | None:intergenic |
| AGACTCTTGAGATCTCCGAA+GGG | 0.686381 | 7_2:-20597196 | None:intergenic |
| TAATCGGTCTCATAGAACGA+AGG | 0.698002 | 7_2:-20602764 | None:intergenic |
| GTGTGTGTTCGGAGAAAACG+AGG | 0.700742 | 7_2:-20597252 | None:intergenic |
| AAATCAACAACAAAATACCA+GGG | 0.703547 | 7_2:+20603404 | Msa1052380:CDS |
| TGTCCTTCAACACCCAACAA+GGG | 0.706241 | 7_2:+20597154 | None:intergenic |
| TTCAACTTTAGATTCCATGG+AGG | 0.714477 | 7_2:-20598964 | None:intergenic |
| ACTCAAGCAGTATCTGACCG+AGG | 0.738694 | 7_2:+20601698 | Msa1052380:CDS |
| ACCATAAGGATAGTACTCTG+GGG | 0.757794 | 7_2:-20604156 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATTTAAAAAAAAAA+GGG | - | chr7_2:20601455-20601474 | None:intergenic | 0.0% |
| !! | TTTAAATATTTAAAAAAAAA+AGG | - | chr7_2:20601456-20601475 | None:intergenic | 0.0% |
| !!! | TGTAAATTTTTAATCTTTTT+TGG | + | chr7_2:20597546-20597565 | Msa1052380:intron | 10.0% |
| !!! | TGTTATAATATTATTTTAGA+GGG | + | chr7_2:20597808-20597827 | Msa1052380:intron | 10.0% |
| !!! | AATATTTTAATGTTTATTTC+AGG | + | chr7_2:20603985-20604004 | Msa1052380:intron | 10.0% |
| !!! | GTGTTATAATATTATTTTAG+AGG | + | chr7_2:20597807-20597826 | Msa1052380:intron | 15.0% |
| !! | AATTTATATATGACTTTCTT+AGG | + | chr7_2:20598525-20598544 | Msa1052380:intron | 15.0% |
| !! | TTTATATTATAGTATGTCAT+TGG | + | chr7_2:20598820-20598839 | Msa1052380:intron | 15.0% |
| !!! | TGTTTTTGTTTTGTATATTT+TGG | + | chr7_2:20599141-20599160 | Msa1052380:intron | 15.0% |
| !! | AATAGTTATTAAGGATAATT+TGG | - | chr7_2:20599958-20599977 | None:intergenic | 15.0% |
| !! | AAATTATCCTTAATAACTAT+TGG | + | chr7_2:20599957-20599976 | Msa1052380:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_2:20599981-20600000 | Msa1052380:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr7_2:20600084-20600103 | Msa1052380:intron | 15.0% |
| !!! | CAAAATGTTTTTATATAAGT+TGG | + | chr7_2:20600721-20600740 | Msa1052380:intron | 15.0% |
| !!! | AATTTTATTTCTTCTACATT+AGG | - | chr7_2:20600994-20601013 | None:intergenic | 15.0% |
| !! | ATCATTTAACATTTAAACTT+AGG | - | chr7_2:20601272-20601291 | None:intergenic | 15.0% |
| !!! | TAAAGTGCTTTATTTAAAAT+GGG | + | chr7_2:20602054-20602073 | Msa1052380:intron | 15.0% |
| !!! | ACTTTTTTTGCTTAAATTTA+AGG | + | chr7_2:20602559-20602578 | Msa1052380:intron | 15.0% |
| !!! | ATTTGAAACAAATGAATTTA+AGG | - | chr7_2:20602693-20602712 | None:intergenic | 15.0% |
| !!! | ATTAAACTTCTAAATTGTTT+TGG | + | chr7_2:20603247-20603266 | Msa1052380:intron | 15.0% |
| !! | ATTAAAATATTATTCGGAAA+AGG | - | chr7_2:20603976-20603995 | None:intergenic | 15.0% |
| !!! | GAGATTTTTCATTTTATTTT+TGG | + | chr7_2:20604453-20604472 | Msa1052380:three_prime_UTR | 15.0% |
| !!! | TTTTCATTTTATTTTTGGTT+TGG | + | chr7_2:20604458-20604477 | Msa1052380:three_prime_UTR | 15.0% |
| !! | TTTACACAAAACAAACAAAA+GGG | - | chr7_2:20597532-20597551 | None:intergenic | 20.0% |
| !! | ATTTACACAAAACAAACAAA+AGG | - | chr7_2:20597533-20597552 | None:intergenic | 20.0% |
| !! | GTAAAATTAATTTACACTGA+CGG | - | chr7_2:20597608-20597627 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAATTATCATCGT+TGG | + | chr7_2:20597949-20597968 | Msa1052380:intron | 20.0% |
| !! | GTTTAATCATATCTCAATAA+GGG | + | chr7_2:20598142-20598161 | Msa1052380:intron | 20.0% |
| !!! | ACTTATTTAACTTTAGTTAC+TGG | + | chr7_2:20598178-20598197 | Msa1052380:intron | 20.0% |
| !! | GAATAACTATCTATTAAGTT+GGG | - | chr7_2:20598661-20598680 | None:intergenic | 20.0% |
| !! | TGAATAACTATCTATTAAGT+TGG | - | chr7_2:20598662-20598681 | None:intergenic | 20.0% |
| !!! | GTTTTGTATATTTTGGAAAT+TGG | + | chr7_2:20599148-20599167 | Msa1052380:intron | 20.0% |
| !! | AAACTAACCAATAGTTATTA+AGG | - | chr7_2:20599967-20599986 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_2:20600044-20600063 | Msa1052380:intron | 20.0% |
| !!! | ATGTTTGAAAATTTTTGTTG+TGG | + | chr7_2:20600167-20600186 | Msa1052380:intron | 20.0% |
| !!! | AGAAACATCTTTTAAGAAAT+TGG | - | chr7_2:20600225-20600244 | None:intergenic | 20.0% |
| !!! | AACCATTTAAGATATTGTTT+TGG | - | chr7_2:20600324-20600343 | None:intergenic | 20.0% |
| !! | GTTTAATATATTACTCAATG+TGG | + | chr7_2:20600341-20600360 | Msa1052380:intron | 20.0% |
| !! | AGAATAGATGATAAGAATAA+AGG | + | chr7_2:20601048-20601067 | Msa1052380:intron | 20.0% |
| !! | AAGAATATAATGATGTGATT+AGG | - | chr7_2:20601302-20601321 | None:intergenic | 20.0% |
| !!! | AATACAAAAATTGCTTTTGT+AGG | + | chr7_2:20601503-20601522 | Msa1052380:intron | 20.0% |
| !!! | ATACAAAAATTGCTTTTGTA+GGG | + | chr7_2:20601504-20601523 | Msa1052380:intron | 20.0% |
| !!! | CTAATTATCTGTAGATTTTA+AGG | + | chr7_2:20602027-20602046 | Msa1052380:intron | 20.0% |
| !!! | GTAAAGTGCTTTATTTAAAA+TGG | + | chr7_2:20602053-20602072 | Msa1052380:intron | 20.0% |
| !!! | TGGTTATATACTTTTGTTAT+AGG | + | chr7_2:20602455-20602474 | Msa1052380:intron | 20.0% |
| !!! | TACTTTTCTGCTTATATTTA+AGG | - | chr7_2:20602515-20602534 | None:intergenic | 20.0% |
| !! | TTAGAAGTTTAATAGAAAGA+TGG | - | chr7_2:20603240-20603259 | None:intergenic | 20.0% |
| !! | AATGAAGATTTAAATTACTG+CGG | - | chr7_2:20603447-20603466 | None:intergenic | 20.0% |
| !! | TCAAACAAAATCAACTTTAT+GGG | + | chr7_2:20603492-20603511 | Msa1052380:intron | 20.0% |
| !! | AATATCTTTGTATATCTTCT+TGG | + | chr7_2:20603568-20603587 | Msa1052380:intron | 20.0% |
| !!! | CATGATTTTTCATCTTATTT+AGG | + | chr7_2:20603671-20603690 | Msa1052380:intron | 20.0% |
| !!! | TTTGAATGTATTTTGAATAG+AGG | + | chr7_2:20604521-20604540 | Msa1052380:three_prime_UTR | 20.0% |
| !!! | TTGAATGTATTTTGAATAGA+GGG | + | chr7_2:20604522-20604541 | Msa1052380:three_prime_UTR | 20.0% |
| !! | AGCTTATTGTTTGAGTTTAA+TGG | + | chr7_2:20597575-20597594 | Msa1052380:intron | 25.0% |
| ! | GAGAAATAGTGAATTCATAT+TGG | - | chr7_2:20597639-20597658 | None:intergenic | 25.0% |
| ! | CGTTTAATCATATCTCAATA+AGG | + | chr7_2:20598141-20598160 | Msa1052380:intron | 25.0% |
| !! | ATATATCTAAAATTTGCACC+TGG | + | chr7_2:20598577-20598596 | Msa1052380:intron | 25.0% |
| !!! | TGAAAGTTTTGATTTGTGTT+GGG | + | chr7_2:20598781-20598800 | Msa1052380:intron | 25.0% |
| ! | ATTGGTTATGTGTATGTATT+TGG | + | chr7_2:20599166-20599185 | Msa1052380:intron | 25.0% |
| ! | TTGGTTATGTGTATGTATTT+GGG | + | chr7_2:20599167-20599186 | Msa1052380:intron | 25.0% |
| !!! | TGAACTGTCTATTTTTTTCA+TGG | + | chr7_2:20599192-20599211 | Msa1052380:intron | 25.0% |
| ! | AGCAAAATTTGAACAAACTA+CGG | + | chr7_2:20599471-20599490 | Msa1052380:intron | 25.0% |
| !! | TTGTGTCATTAGCAATATAA+GGG | - | chr7_2:20599807-20599826 | None:intergenic | 25.0% |
| !! | TTTGTGTCATTAGCAATATA+AGG | - | chr7_2:20599808-20599827 | None:intergenic | 25.0% |
| ! | ATTGCTAATGACACAAAATT+TGG | + | chr7_2:20599811-20599830 | Msa1052380:intron | 25.0% |
| ! | TTGCTAATGACACAAAATTT+GGG | + | chr7_2:20599812-20599831 | Msa1052380:intron | 25.0% |
| !! | AAAAGATGTTTCTATCATTC+TGG | + | chr7_2:20600232-20600251 | Msa1052380:CDS | 25.0% |
| ! | TTATACAGAAAGACAAATGT+TGG | + | chr7_2:20600528-20600547 | Msa1052380:intron | 25.0% |
| ! | TCAATTAACAATATTCTGAC+TGG | + | chr7_2:20600571-20600590 | Msa1052380:intron | 25.0% |
| ! | ACAATATTCAAGGAACTTTA+TGG | - | chr7_2:20600614-20600633 | None:intergenic | 25.0% |
| !!! | TTGGTTTTCATAAACTTGTA+GGG | + | chr7_2:20600740-20600759 | Msa1052380:intron | 25.0% |
| ! | ATCCATATGTTCTCTTAATT+AGG | - | chr7_2:20600784-20600803 | None:intergenic | 25.0% |
| ! | CTGCTAATAAAAAGACTTTA+AGG | + | chr7_2:20600948-20600967 | Msa1052380:intron | 25.0% |
| ! | TTCTACATTAGGAAAATACT+GGG | - | chr7_2:20600983-20601002 | None:intergenic | 25.0% |
| ! | AGATGATAAGAATAAAGGAA+TGG | + | chr7_2:20601053-20601072 | Msa1052380:intron | 25.0% |
| !! | TATAGAGATGACATTTTATG+TGG | - | chr7_2:20601129-20601148 | None:intergenic | 25.0% |
| ! | ACTCAGTATATGAATAATGA+AGG | + | chr7_2:20601397-20601416 | Msa1052380:intron | 25.0% |
| ! | ACAGCATCTATGAATATATT+AGG | - | chr7_2:20601570-20601589 | None:intergenic | 25.0% |
| ! | CTTATATGATAAAGTGTGAA+TGG | - | chr7_2:20601785-20601804 | None:intergenic | 25.0% |
| !! | CTGTTTTCATAAGCTTATAT+TGG | + | chr7_2:20601876-20601895 | Msa1052380:intron | 25.0% |
| !!! | AACAATCTTAGAAGTGTTTA+TGG | + | chr7_2:20601967-20601986 | Msa1052380:intron | 25.0% |
| ! | TAAAATGGGAAACATTATAC+AGG | + | chr7_2:20602068-20602087 | Msa1052380:intron | 25.0% |
| ! | CAAAAATGAGATTTGAGAAT+CGG | - | chr7_2:20602141-20602160 | None:intergenic | 25.0% |
| !! | TTGATATTCTCAGAAGATTT+TGG | + | chr7_2:20602199-20602218 | Msa1052380:CDS | 25.0% |
| ! | CACTTATTCTGATCTTAAAA+TGG | + | chr7_2:20602267-20602286 | Msa1052380:intron | 25.0% |
| !! | TTTCTGCTTATATTTAAGGT+CGG | - | chr7_2:20602511-20602530 | None:intergenic | 25.0% |
| ! | GCAAAAAAAGTTCATGTATT+TGG | - | chr7_2:20602550-20602569 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTAAATTTAAGGC+CGG | + | chr7_2:20602563-20602582 | Msa1052380:intron | 25.0% |
| !!! | ACTTTTTTCTGAAATTCCTT+TGG | + | chr7_2:20602616-20602635 | Msa1052380:intron | 25.0% |
| !!! | CTTTTTTCTGAAATTCCTTT+GGG | + | chr7_2:20602617-20602636 | Msa1052380:intron | 25.0% |
| ! | TTCAAATAAATACCTTCATC+CGG | - | chr7_2:20603385-20603404 | None:intergenic | 25.0% |
| ! | AAAATCAACAACAAAATACC+AGG | + | chr7_2:20603403-20603422 | Msa1052380:CDS | 25.0% |
| ! | AAATCAACAACAAAATACCA+GGG | + | chr7_2:20603404-20603423 | Msa1052380:CDS | 25.0% |
| ! | CTCAAACAAAATCAACTTTA+TGG | + | chr7_2:20603491-20603510 | Msa1052380:intron | 25.0% |
| !! | TTCTAACGGAATGTATTTTT+GGG | - | chr7_2:20603520-20603539 | None:intergenic | 25.0% |
| !! | TTTCTAACGGAATGTATTTT+TGG | - | chr7_2:20603521-20603540 | None:intergenic | 25.0% |
| !!! | GATGTTCTCTTATTTTCTAA+CGG | - | chr7_2:20603534-20603553 | None:intergenic | 25.0% |
| ! | AATAAGAGAACATCTCATTA+TGG | + | chr7_2:20603540-20603559 | Msa1052380:intron | 25.0% |
| ! | AATAATAGCAATAAGAGATG+CGG | - | chr7_2:20603643-20603662 | None:intergenic | 25.0% |
| ! | AATGTGTGTCAAATATCATA+TGG | - | chr7_2:20603925-20603944 | None:intergenic | 25.0% |
| !! | GTTTAATTTCACTGCATTAA+TGG | - | chr7_2:20603954-20603973 | None:intergenic | 25.0% |
| !! | ATTTTTCTACATCTAATCCA+AGG | - | chr7_2:20604241-20604260 | None:intergenic | 25.0% |
| !!! | TCATTTTATTTTTGGTTTGG+TGG | + | chr7_2:20604461-20604480 | Msa1052380:three_prime_UTR | 25.0% |
| ! | ATCTTGAAATTGTATGACTT+TGG | + | chr7_2:20604559-20604578 | Msa1052380:three_prime_UTR | 25.0% |
| TAATAGTGATTGAGTAATGG+AGG | - | chr7_2:20597316-20597335 | None:intergenic | 30.0% | |
| CCATAATAGTGATTGAGTAA+TGG | - | chr7_2:20597319-20597338 | None:intergenic | 30.0% | |
| CCATTACTCAATCACTATTA+TGG | + | chr7_2:20597316-20597335 | Msa1052380:exon | 30.0% | |
| !! | TCAACACAATTTGTTACAAC+AGG | + | chr7_2:20597472-20597491 | Msa1052380:CDS | 30.0% |
| TCCATGTTATACCATTGAAA+TGG | + | chr7_2:20597657-20597676 | Msa1052380:intron | 30.0% | |
| CCATGTTATACCATTGAAAT+GGG | + | chr7_2:20597658-20597677 | Msa1052380:intron | 30.0% | |
| CATGTTATACCATTGAAATG+GGG | + | chr7_2:20597659-20597678 | Msa1052380:intron | 30.0% | |
| TCCAATAACAGTCATGTATT+TGG | - | chr7_2:20597703-20597722 | None:intergenic | 30.0% | |
| AAAAATAAGATACACACCGA+AGG | - | chr7_2:20597749-20597768 | None:intergenic | 30.0% | |
| AGAGGGTAATAATAGATGAA+TGG | + | chr7_2:20597825-20597844 | Msa1052380:intron | 30.0% | |
| GTATTGTAATCACATGTATG+TGG | - | chr7_2:20597889-20597908 | None:intergenic | 30.0% | |
| TTAAATAAGTCAATCCGAAC+AGG | - | chr7_2:20598168-20598187 | None:intergenic | 30.0% | |
| ATGACACATAGTGATATGAT+TGG | + | chr7_2:20598473-20598492 | Msa1052380:intron | 30.0% | |
| ! | GACGACTATTCAAACTTTTA+AGG | + | chr7_2:20598495-20598514 | Msa1052380:intron | 30.0% |
| !! | GACTATTCAAACTTTTAAGG+TGG | + | chr7_2:20598498-20598517 | Msa1052380:intron | 30.0% |
| TCGACGTATTATAAAATGGA+TGG | - | chr7_2:20598739-20598758 | None:intergenic | 30.0% | |
| CATGTCGACGTATTATAAAA+TGG | - | chr7_2:20598743-20598762 | None:intergenic | 30.0% | |
| !!! | GTGAAAGTTTTGATTTGTGT+TGG | + | chr7_2:20598780-20598799 | Msa1052380:intron | 30.0% |
| !!! | GAAAGTTTTGATTTGTGTTG+GGG | + | chr7_2:20598782-20598801 | Msa1052380:intron | 30.0% |
| GATAAAACCGACAATAATTC+AGG | - | chr7_2:20598945-20598964 | None:intergenic | 30.0% | |
| ! | ATGGAATCTAAAGTTGAAGA+CGG | + | chr7_2:20598969-20598988 | Msa1052380:CDS | 30.0% |
| ACTGTTAGTATAACTGTTGT+TGG | + | chr7_2:20599017-20599036 | Msa1052380:CDS | 30.0% | |
| ! | ACTTTTTGCACTTTACTATG+AGG | + | chr7_2:20599079-20599098 | Msa1052380:CDS | 30.0% |
| ! | CTTTTTGCACTTTACTATGA+GGG | + | chr7_2:20599080-20599099 | Msa1052380:CDS | 30.0% |
| ATGTATCAATATCCAACCTT+AGG | - | chr7_2:20599113-20599132 | None:intergenic | 30.0% | |
| TTACCTGTAGAATTGATAAG+AGG | + | chr7_2:20599291-20599310 | Msa1052380:CDS | 30.0% | |
| TTACCTCTTATCAATTCTAC+AGG | - | chr7_2:20599297-20599316 | None:intergenic | 30.0% | |
| ! | ATTCTGCTATTTAACAACAC+TGG | - | chr7_2:20599373-20599392 | None:intergenic | 30.0% |
| TGCTTTCTTTATCTTCTCTT+GGG | + | chr7_2:20599554-20599573 | Msa1052380:intron | 30.0% | |
| !! | TGATTCAGGTTGTCAAATAT+TGG | + | chr7_2:20599586-20599605 | Msa1052380:intron | 30.0% |
| AACTTTGGATTTCTCATTGT+GGG | + | chr7_2:20599779-20599798 | Msa1052380:intron | 30.0% | |
| ! | ACACAAAATTTGGGATTCAA+TGG | + | chr7_2:20599821-20599840 | Msa1052380:intron | 30.0% |
| GGCCAAAACAATATCTTAAA+TGG | + | chr7_2:20600319-20600338 | Msa1052380:intron | 30.0% | |
| AATAAAATTCACATGCACCT+TGG | - | chr7_2:20600369-20600388 | None:intergenic | 30.0% | |
| TAATAAGAGAGTAAGCTTTC+TGG | + | chr7_2:20600391-20600410 | Msa1052380:intron | 30.0% | |
| AACTTTCATCCAGATTAGAT+AGG | + | chr7_2:20600431-20600450 | Msa1052380:intron | 30.0% | |
| CAATAACAGCACAATATTCA+AGG | - | chr7_2:20600624-20600643 | None:intergenic | 30.0% | |
| !!! | GTTGGTTTTCATAAACTTGT+AGG | + | chr7_2:20600739-20600758 | Msa1052380:intron | 30.0% |
| ATTAGGTCGTTTATCAAAAC+AGG | - | chr7_2:20600767-20600786 | None:intergenic | 30.0% | |
| GACCTAATTAAGAGAACATA+TGG | + | chr7_2:20600779-20600798 | Msa1052380:intron | 30.0% | |
| CTTCTACATTAGGAAAATAC+TGG | - | chr7_2:20600984-20601003 | None:intergenic | 30.0% | |
| !! | AGAAGTCATTTAGCTTTCAA+TGG | - | chr7_2:20601020-20601039 | None:intergenic | 30.0% |
| GCTGAAGAATAAAGAAAACA+AGG | + | chr7_2:20601078-20601097 | Msa1052380:intron | 30.0% | |
| GTAACAACTAATGAATGACA+GGG | - | chr7_2:20601189-20601208 | None:intergenic | 30.0% | |
| AGTAACAACTAATGAATGAC+AGG | - | chr7_2:20601190-20601209 | None:intergenic | 30.0% | |
| AGTATGATAAATTTGCACAG+TGG | - | chr7_2:20601339-20601358 | None:intergenic | 30.0% | |
| !! | AAAAATTGCTTTTGTAGGGT+GGG | + | chr7_2:20601508-20601527 | Msa1052380:intron | 30.0% |
| GAGGAATTGAAAGATAAAAC+AGG | - | chr7_2:20601548-20601567 | None:intergenic | 30.0% | |
| GCATCTATGAATATATTAGG+AGG | - | chr7_2:20601567-20601586 | None:intergenic | 30.0% | |
| AAACCTGAAAATTTGATCCT+CGG | - | chr7_2:20601718-20601737 | None:intergenic | 30.0% | |
| TAATTAGAGCATGTTTGGAT+TGG | - | chr7_2:20602014-20602033 | None:intergenic | 30.0% | |
| ACAGATAATTAGAGCATGTT+TGG | - | chr7_2:20602019-20602038 | None:intergenic | 30.0% | |
| ! | TTTATATCTTTTCCACGTGT+AGG | + | chr7_2:20602304-20602323 | Msa1052380:intron | 30.0% |
| TGTAGGTACTTTGACAATTA+TGG | + | chr7_2:20602321-20602340 | Msa1052380:intron | 30.0% | |
| AGAGGACATTAGAAATGAAA+AGG | + | chr7_2:20602425-20602444 | Msa1052380:CDS | 30.0% | |
| AGAAATGAAAAGGTCTCATA+TGG | + | chr7_2:20602435-20602454 | Msa1052380:intron | 30.0% | |
| CATGACTTTCAATTGCTTAA+TGG | + | chr7_2:20602726-20602745 | Msa1052380:intron | 30.0% | |
| !! | TACAGTTTTGTCATCAATGT+AGG | - | chr7_2:20602853-20602872 | None:intergenic | 30.0% |
| TCTTGCATTATCTATGAAGA+GGG | - | chr7_2:20602913-20602932 | None:intergenic | 30.0% | |
| ATCTTGCATTATCTATGAAG+AGG | - | chr7_2:20602914-20602933 | None:intergenic | 30.0% | |
| TCTTCATAGATAATGCAAGA+TGG | + | chr7_2:20602913-20602932 | Msa1052380:CDS | 30.0% | |
| CTTCATAGATAATGCAAGAT+GGG | + | chr7_2:20602914-20602933 | Msa1052380:CDS | 30.0% | |
| !! | TACAAAGTGTTGTCAAATAG+CGG | - | chr7_2:20603095-20603114 | None:intergenic | 30.0% |
| TTCTCAAATAGCCGATATAT+CGG | - | chr7_2:20603182-20603201 | None:intergenic | 30.0% | |
| ! | AATCTGTACAATCGGAATTT+TGG | + | chr7_2:20603313-20603332 | Msa1052380:CDS | 30.0% |
| ATTTGTAGCATGATCAAGAT+CGG | - | chr7_2:20603341-20603360 | None:intergenic | 30.0% | |
| !! | ACTTGTTATAAAAGTTCAGC+CGG | + | chr7_2:20603363-20603382 | Msa1052380:CDS | 30.0% |
| TAAATCTTCATTATGCAGCA+AGG | + | chr7_2:20603455-20603474 | Msa1052380:CDS | 30.0% | |
| !! | TCTAACGGAATGTATTTTTG+GGG | - | chr7_2:20603519-20603538 | None:intergenic | 30.0% |
| ACCAGCTAAATAATCTATTG+CGG | - | chr7_2:20603835-20603854 | None:intergenic | 30.0% | |
| ATTTCACTGCATTAATGGAA+TGG | - | chr7_2:20603949-20603968 | None:intergenic | 30.0% | |
| !! | TTGATTTGTGGTTTCTTGTT+TGG | + | chr7_2:20604318-20604337 | Msa1052380:three_prime_UTR | 30.0% |
| !!! | GTTTTTTCAAGTCAAGAGTA+TGG | + | chr7_2:20604346-20604365 | Msa1052380:three_prime_UTR | 30.0% |
| AGAGTATGGCATAGTAATAT+TGG | + | chr7_2:20604360-20604379 | Msa1052380:three_prime_UTR | 30.0% | |
| ATGGCATAGTAATATTGGTA+TGG | + | chr7_2:20604365-20604384 | Msa1052380:three_prime_UTR | 30.0% | |
| CATAGTAATATTGGTATGGT+AGG | + | chr7_2:20604369-20604388 | Msa1052380:three_prime_UTR | 30.0% | |
| !!! | TTTTATTTTTGGTTTGGTGG+AGG | + | chr7_2:20604464-20604483 | Msa1052380:three_prime_UTR | 30.0% |
| !!! | TTTATTTTTGGTTTGGTGGA+GGG | + | chr7_2:20604465-20604484 | Msa1052380:three_prime_UTR | 30.0% |
| ! | GATTGAGTAATGGAGGAAAA+GGG | - | chr7_2:20597309-20597328 | None:intergenic | 35.0% |
| ! | TGATTGAGTAATGGAGGAAA+AGG | - | chr7_2:20597310-20597329 | None:intergenic | 35.0% |
| TTAGAGGACAAAGAAGAAGA+TGG | - | chr7_2:20597395-20597414 | None:intergenic | 35.0% | |
| TAGAGAAAGTAACAGCAGAT+TGG | - | chr7_2:20597418-20597437 | None:intergenic | 35.0% | |
| AAACAGTAGCAGCAAGAAAA+CGG | - | chr7_2:20597442-20597461 | None:intergenic | 35.0% | |
| CCCATTTCAATGGTATAACA+TGG | - | chr7_2:20597661-20597680 | None:intergenic | 35.0% | |
| GCCAAATACATGACTGTTAT+TGG | + | chr7_2:20597699-20597718 | Msa1052380:intron | 35.0% | |
| GTGAAGTTATGTTACACCTT+CGG | + | chr7_2:20597730-20597749 | Msa1052380:intron | 35.0% | |
| TAATAGATGAATGGTGCACT+AGG | + | chr7_2:20597834-20597853 | Msa1052380:intron | 35.0% | |
| CCATGTGTGATATTTAAACG+CGG | + | chr7_2:20598117-20598136 | Msa1052380:intron | 35.0% | |
| ! | TTTGGATGAACAACTTTTGC+AGG | - | chr7_2:20598402-20598421 | None:intergenic | 35.0% |
| ATTGGGACAAATATCTACCT+AGG | - | chr7_2:20598430-20598449 | None:intergenic | 35.0% | |
| AGGTTTCTGAGCAAAAACTA+AGG | + | chr7_2:20598545-20598564 | Msa1052380:intron | 35.0% | |
| GCTATATATTCAATCGAACC+AGG | - | chr7_2:20598598-20598617 | None:intergenic | 35.0% | |
| !! | ACTATCTATTAAGTTGGGTC+TGG | - | chr7_2:20598656-20598675 | None:intergenic | 35.0% |
| CAATTATACACCGATAGTAG+AGG | - | chr7_2:20598698-20598717 | None:intergenic | 35.0% | |
| TCTTAGTCTCAGTATGACAA+TGG | + | chr7_2:20598847-20598866 | Msa1052380:intron | 35.0% | |
| GTTGCAACCTGAATTATTGT+CGG | + | chr7_2:20598935-20598954 | Msa1052380:CDS | 35.0% | |
| TTCAACTTTAGATTCCATGG+AGG | - | chr7_2:20598967-20598986 | None:intergenic | 35.0% | |
| GTCTTCAACTTTAGATTCCA+TGG | - | chr7_2:20598970-20598989 | None:intergenic | 35.0% | |
| GAAATATCTTCTTCTTGGCA+AGG | - | chr7_2:20599055-20599074 | None:intergenic | 35.0% | |
| TGCTGGAAATATCTTCTTCT+TGG | - | chr7_2:20599060-20599079 | None:intergenic | 35.0% | |
| ! | TAGTAAAGTGCAAAAAGTGC+TGG | - | chr7_2:20599077-20599096 | None:intergenic | 35.0% |
| TGATGCAGAACTGAGAAATA+TGG | + | chr7_2:20599256-20599275 | Msa1052380:CDS | 35.0% | |
| ! | AATCCGCGATTGATAACATT+TGG | + | chr7_2:20599502-20599521 | Msa1052380:intron | 35.0% |
| ! | ATCCGCGATTGATAACATTT+GGG | + | chr7_2:20599503-20599522 | Msa1052380:intron | 35.0% |
| GTGCTTTCTTTATCTTCTCT+TGG | + | chr7_2:20599553-20599572 | Msa1052380:intron | 35.0% | |
| GCTTTCTTTATCTTCTCTTG+GGG | + | chr7_2:20599555-20599574 | Msa1052380:intron | 35.0% | |
| TTTATCTTCTCTTGGGGTTA+TGG | + | chr7_2:20599561-20599580 | Msa1052380:intron | 35.0% | |
| GATCCAAAAATCTGACATAC+AGG | - | chr7_2:20599730-20599749 | None:intergenic | 35.0% | |
| GAACTTTGGATTTCTCATTG+TGG | + | chr7_2:20599778-20599797 | Msa1052380:intron | 35.0% | |
| ACTTTGGATTTCTCATTGTG+GGG | + | chr7_2:20599780-20599799 | Msa1052380:intron | 35.0% | |
| !! | AAACGACACTCATTTTGACA+CGG | - | chr7_2:20599875-20599894 | None:intergenic | 35.0% |
| !!! | GTCAAAATGAGTGTCGTTTT+AGG | + | chr7_2:20599876-20599895 | Msa1052380:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr7_2:20600006-20600025 | Msa1052380:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr7_2:20600010-20600029 | Msa1052380:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr7_2:20600110-20600129 | Msa1052380:intron | 35.0% |
| !! | AGGGAGTATTTGTTATGCTT+GGG | + | chr7_2:20600133-20600152 | Msa1052380:intron | 35.0% |
| AGAGAATTGCAGTGAAAAGA+TGG | + | chr7_2:20600198-20600217 | Msa1052380:CDS | 35.0% | |
| ! | AGTTTTCCGGAGAATCATAT+TGG | - | chr7_2:20600258-20600277 | None:intergenic | 35.0% |
| TATTACTCAATGTGGTTCCA+AGG | + | chr7_2:20600349-20600368 | Msa1052380:intron | 35.0% | |
| TCAAGGAACTTTATGGTACA+AGG | - | chr7_2:20600607-20600626 | None:intergenic | 35.0% | |
| AACTGACATGTGTCAAACAT+CGG | + | chr7_2:20600902-20600921 | Msa1052380:intron | 35.0% | |
| ! | TCTTTTTATTAGCAGACACC+TGG | - | chr7_2:20600943-20600962 | None:intergenic | 35.0% |
| !! | CAAAAATTGCTTTTGTAGGG+TGG | + | chr7_2:20601507-20601526 | Msa1052380:intron | 35.0% |
| ! | GTCATTGTTGAAAAGCCTTT+TGG | + | chr7_2:20601639-20601658 | Msa1052380:CDS | 35.0% |
| AACTAAACTATGACCGTGTT+TGG | + | chr7_2:20601741-20601760 | Msa1052380:intron | 35.0% | |
| GCGCTTAATATATCCAAACA+CGG | - | chr7_2:20601757-20601776 | None:intergenic | 35.0% | |
| AGATTGTTTGAAAGAGCTGA+TGG | - | chr7_2:20601955-20601974 | None:intergenic | 35.0% | |
| AATAAGTGTGAATGCTGCAA+AGG | - | chr7_2:20602255-20602274 | None:intergenic | 35.0% | |
| AATACTAACCCTCTTTGCAA+TGG | + | chr7_2:20602380-20602399 | Msa1052380:CDS | 35.0% | |
| ! | TGCTTATATTTAAGGTCGGA+GGG | - | chr7_2:20602507-20602526 | None:intergenic | 35.0% |
| ACTCTAGCATATAAATCCTC+CGG | - | chr7_2:20602585-20602604 | None:intergenic | 35.0% | |
| !!! | TTTTCTGAAATTCCTTTGGG+TGG | + | chr7_2:20602620-20602639 | Msa1052380:intron | 35.0% |
| ! | TCAATTGCTTAATGGATGTC+AGG | + | chr7_2:20602734-20602753 | Msa1052380:intron | 35.0% |
| ACTACATCCTCGAGTTTAAT+CGG | - | chr7_2:20602783-20602802 | None:intergenic | 35.0% | |
| ! | AAACTCGAGGATGTAGTTTT+AGG | + | chr7_2:20602786-20602805 | Msa1052380:CDS | 35.0% |
| CTCTTGTGTGGTTCTTATAT+TGG | - | chr7_2:20602812-20602831 | None:intergenic | 35.0% | |
| CAATATAAGAACCACACAAG+AGG | + | chr7_2:20602810-20602829 | Msa1052380:CDS | 35.0% | |
| TGATGACAAAACTGTACCAA+AGG | + | chr7_2:20602857-20602876 | Msa1052380:CDS | 35.0% | |
| GATGACAAAACTGTACCAAA+GGG | + | chr7_2:20602858-20602877 | Msa1052380:CDS | 35.0% | |
| ATAGATAATGCAAGATGGGA+TGG | + | chr7_2:20602918-20602937 | Msa1052380:CDS | 35.0% | |
| TAGATAATGCAAGATGGGAT+GGG | + | chr7_2:20602919-20602938 | Msa1052380:CDS | 35.0% | |
| !!! | TACCTTTTTTGATGAAGGCA+GGG | + | chr7_2:20602943-20602962 | Msa1052380:CDS | 35.0% |
| TAGCAGCTTGTGAAAATTTG+CGG | + | chr7_2:20603023-20603042 | Msa1052380:intron | 35.0% | |
| AACAACAAAATACCAGGGTT+AGG | + | chr7_2:20603409-20603428 | Msa1052380:CDS | 35.0% | |
| TCCGCAATAGATTATTTAGC+TGG | + | chr7_2:20603831-20603850 | Msa1052380:intron | 35.0% | |
| ! | TGTTTATTTCAGGTACTCGA+AGG | + | chr7_2:20603995-20604014 | Msa1052380:intron | 35.0% |
| AAATACCAGATGCTTATGAG+AGG | + | chr7_2:20604018-20604037 | Msa1052380:CDS | 35.0% | |
| TTGCTTCTTGATGCAATTGA+AGG | + | chr7_2:20604041-20604060 | Msa1052380:CDS | 35.0% | |
| TCTTCTATCTCATTCAACAC+GGG | - | chr7_2:20604125-20604144 | None:intergenic | 35.0% | |
| CTCTTCTATCTCATTCAACA+CGG | - | chr7_2:20604126-20604145 | None:intergenic | 35.0% | |
| TACCATAAGGATAGTACTCT+GGG | - | chr7_2:20604160-20604179 | None:intergenic | 35.0% | |
| ATGTGAGAGGAAGAAGAAGA+AGG | - | chr7_2:20597232-20597251 | None:intergenic | 40.0% | |
| GGAAACGAAGAAGAAGAAGA+AGG | - | chr7_2:20597374-20597393 | None:intergenic | 40.0% | |
| ! | AGTAACAGCAGATTGGTTAG+AGG | - | chr7_2:20597411-20597430 | None:intergenic | 40.0% |
| CAGGTTTCAGTTCATGTTGA+TGG | + | chr7_2:20597491-20597510 | Msa1052380:CDS | 40.0% | |
| !! | ACATGTATGTGGTGTCATGT+TGG | - | chr7_2:20597878-20597897 | None:intergenic | 40.0% |
| ATCACATGTATCAGTGTCAG+TGG | - | chr7_2:20597911-20597930 | None:intergenic | 40.0% | |
| GAATTGATCACCTTAGCTAG+AGG | + | chr7_2:20598086-20598105 | Msa1052380:intron | 40.0% | |
| GGATTTATCTCCTCTAGCTA+AGG | - | chr7_2:20598099-20598118 | None:intergenic | 40.0% | |
| CCGCGTTTAAATATCACACA+TGG | - | chr7_2:20598120-20598139 | None:intergenic | 40.0% | |
| TATCTCAATAAGGGCCTGTT+CGG | + | chr7_2:20598151-20598170 | Msa1052380:intron | 40.0% | |
| ATATCTACCTAGGCTCTGTT+TGG | - | chr7_2:20598420-20598439 | None:intergenic | 40.0% | |
| GACACTTACACCTCTACTAT+CGG | + | chr7_2:20598685-20598704 | Msa1052380:intron | 40.0% | |
| TGACAATGGCATGTAAATGC+AGG | + | chr7_2:20598861-20598880 | Msa1052380:intron | 40.0% | |
| ! | GTTTTCAACAGGGGTTACAT+TGG | - | chr7_2:20598898-20598917 | None:intergenic | 40.0% |
| !! | ACTATGGCTGTTTTCAACAG+GGG | - | chr7_2:20598907-20598926 | None:intergenic | 40.0% |
| !! | CACTATGGCTGTTTTCAACA+GGG | - | chr7_2:20598908-20598927 | None:intergenic | 40.0% |
| !!! | ATTGTCGGTTTTATCCTCCA+TGG | + | chr7_2:20598950-20598969 | Msa1052380:CDS | 40.0% |
| ! | AGTTGAAGACGGTGTTGAAA+AGG | + | chr7_2:20598980-20598999 | Msa1052380:CDS | 40.0% |
| ACTTCGAGCATAACCACAAA+TGG | - | chr7_2:20599228-20599247 | None:intergenic | 40.0% | |
| TGAAACGAAGGAGAACAAGT+TGG | - | chr7_2:20599328-20599347 | None:intergenic | 40.0% | |
| GCTCTATAAGACTGAAACGA+AGG | - | chr7_2:20599340-20599359 | None:intergenic | 40.0% | |
| ! | TCCGCGATTGATAACATTTG+GGG | + | chr7_2:20599504-20599523 | Msa1052380:intron | 40.0% |
| ACCCCAAATGTTATCAATCG+CGG | - | chr7_2:20599508-20599527 | None:intergenic | 40.0% | |
| TTGGGGTTATGGTTTGATTC+AGG | + | chr7_2:20599572-20599591 | Msa1052380:intron | 40.0% | |
| AGGTTGTCAAATATTGGCCA+TGG | + | chr7_2:20599592-20599611 | Msa1052380:intron | 40.0% | |
| TTGTCAAATATTGGCCATGG+CGG | + | chr7_2:20599595-20599614 | Msa1052380:CDS | 40.0% | |
| !!! | AGATATTGTTGACGGGCTTT+TGG | + | chr7_2:20599627-20599646 | Msa1052380:CDS | 40.0% |
| ATCCTTCACAAAATTGGCCA+TGG | - | chr7_2:20599660-20599679 | None:intergenic | 40.0% | |
| ! | ATGGCCAATTTTGTGAAGGA+TGG | + | chr7_2:20599659-20599678 | Msa1052380:CDS | 40.0% |
| GATATGGCAGTGCCATATTT+CGG | + | chr7_2:20599704-20599723 | Msa1052380:CDS | 40.0% | |
| !! | CGTTGGTTTGCTTTGAACTT+TGG | + | chr7_2:20599764-20599783 | Msa1052380:intron | 40.0% |
| CTTTGGATTTCTCATTGTGG+GGG | + | chr7_2:20599781-20599800 | Msa1052380:intron | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr7_2:20600009-20600028 | Msa1052380:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7_2:20600114-20600133 | Msa1052380:intron | 40.0% |
| !! | GAGGGAGTATTTGTTATGCT+TGG | + | chr7_2:20600132-20600151 | Msa1052380:intron | 40.0% |
| TTCTGGCCAATATGATTCTC+CGG | + | chr7_2:20600249-20600268 | Msa1052380:CDS | 40.0% | |
| ! | TCTAGTGCTGCAAAGTTTTC+CGG | - | chr7_2:20600271-20600290 | None:intergenic | 40.0% |
| CTGAATGAGCATGAGGTAAT+TGG | + | chr7_2:20600298-20600317 | Msa1052380:intron | 40.0% | |
| CTGCAAAGACCTATCTAATC+TGG | - | chr7_2:20600443-20600462 | None:intergenic | 40.0% | |
| ATCAAATGAGCACAATCACG+TGG | - | chr7_2:20600479-20600498 | None:intergenic | 40.0% | |
| !! | CTACCAAAAAGCACCAGATA+AGG | + | chr7_2:20600851-20600870 | Msa1052380:intron | 40.0% |
| ! | GAACCTTATCTGGTGCTTTT+TGG | - | chr7_2:20600857-20600876 | None:intergenic | 40.0% |
| CACCAGATAAGGTTCTATGT+GGG | + | chr7_2:20600862-20600881 | Msa1052380:intron | 40.0% | |
| TACCCACATAGAACCTTATC+TGG | - | chr7_2:20600867-20600886 | None:intergenic | 40.0% | |
| ACTGACATGTGTCAAACATC+GGG | + | chr7_2:20600903-20600922 | Msa1052380:intron | 40.0% | |
| AGACTAGCAACAACACGTAA+CGG | - | chr7_2:20601160-20601179 | None:intergenic | 40.0% | |
| !!! | CGTGTTGTTGCTAGTCTTTT+TGG | + | chr7_2:20601163-20601182 | Msa1052380:intron | 40.0% |
| GATTCTGAATCACGACCAAA+AGG | - | chr7_2:20601657-20601676 | None:intergenic | 40.0% | |
| TGATCTTGTTAAAGCAGCTG+AGG | - | chr7_2:20601679-20601698 | None:intergenic | 40.0% | |
| ! | TGACCGAGGATCAAATTTTC+AGG | + | chr7_2:20601712-20601731 | Msa1052380:CDS | 40.0% |
| TACAGGATCGATCACTATCT+TGG | + | chr7_2:20602085-20602104 | Msa1052380:intron | 40.0% | |
| CTATCTTGGAAAAGAGCTTG+TGG | + | chr7_2:20602099-20602118 | Msa1052380:CDS | 40.0% | |
| !! | TCAGAAGATTTTGGTACCGA+AGG | + | chr7_2:20602208-20602227 | Msa1052380:CDS | 40.0% |
| ! | ATTGTCAAAGTACCTACACG+TGG | - | chr7_2:20602319-20602338 | None:intergenic | 40.0% |
| AATGGAAACCCCTGTTAGTT+TGG | + | chr7_2:20602398-20602417 | Msa1052380:CDS | 40.0% | |
| ! | CTGCTTATATTTAAGGTCGG+AGG | - | chr7_2:20602508-20602527 | None:intergenic | 40.0% |
| ! | TTGCTTAAATTTAAGGCCGG+AGG | + | chr7_2:20602566-20602585 | Msa1052380:intron | 40.0% |
| TCTATAACCATGAGTCTCTG+AGG | - | chr7_2:20602670-20602689 | None:intergenic | 40.0% | |
| TAATCGGTCTCATAGAACGA+AGG | - | chr7_2:20602767-20602786 | None:intergenic | 40.0% | |
| TATGAGACCGATTAAACTCG+AGG | + | chr7_2:20602773-20602792 | Msa1052380:CDS | 40.0% | |
| TATAAGAACCACACAAGAGG+AGG | + | chr7_2:20602813-20602832 | Msa1052380:CDS | 40.0% | |
| ! | GTTTTGTCATCAATGTAGGC+TGG | - | chr7_2:20602849-20602868 | None:intergenic | 40.0% |
| AGATAATGCAAGATGGGATG+GGG | + | chr7_2:20602920-20602939 | Msa1052380:CDS | 40.0% | |
| !!! | TGGGGTACCTTTTTTGATGA+AGG | + | chr7_2:20602938-20602957 | Msa1052380:CDS | 40.0% |
| !!! | GTACCTTTTTTGATGAAGGC+AGG | + | chr7_2:20602942-20602961 | Msa1052380:CDS | 40.0% |
| TTCCCTGCCTTCATCAAAAA+AGG | - | chr7_2:20602948-20602967 | None:intergenic | 40.0% | |
| TATTCCTCTCACTTACCTCT+TGG | - | chr7_2:20602982-20603001 | None:intergenic | 40.0% | |
| ! | TATCGGCTATTTGAGAACAC+TGG | + | chr7_2:20603185-20603204 | Msa1052380:intron | 40.0% |
| ATAAAAGTTCAGCCGGATGA+AGG | + | chr7_2:20603370-20603389 | Msa1052380:CDS | 40.0% | |
| GAGAACATCTCATTATGGCT+TGG | + | chr7_2:20603545-20603564 | Msa1052380:intron | 40.0% | |
| ATTGCGGAATGTTGAAGTTG+TGG | - | chr7_2:20603819-20603838 | None:intergenic | 40.0% | |
| ACCATAAGGATAGTACTCTG+GGG | - | chr7_2:20604159-20604178 | None:intergenic | 40.0% | |
| CTACCATAAGGATAGTACTC+TGG | - | chr7_2:20604161-20604180 | None:intergenic | 40.0% | |
| TACTATCCTTATGGTAGTCG+TGG | + | chr7_2:20604164-20604183 | Msa1052380:CDS | 40.0% | |
| !! | CTAGCTCACATGTTGATTTG+TGG | + | chr7_2:20604306-20604325 | Msa1052380:three_prime_UTR | 40.0% |
| AGACTCTTGAGATCTCCGAA+GGG | - | chr7_2:20597199-20597218 | None:intergenic | 45.0% | |
| AAGACTCTTGAGATCTCCGA+AGG | - | chr7_2:20597200-20597219 | None:intergenic | 45.0% | |
| ! | AGAGAGTGTGTGTGTGTGTT+CGG | - | chr7_2:20597266-20597285 | None:intergenic | 45.0% |
| ACCATTGAAATGGGGTGTAG+TGG | + | chr7_2:20597667-20597686 | Msa1052380:intron | 45.0% | |
| CCATTGAAATGGGGTGTAGT+GGG | + | chr7_2:20597668-20597687 | Msa1052380:intron | 45.0% | |
| CATTGAAATGGGGTGTAGTG+GGG | + | chr7_2:20597669-20597688 | Msa1052380:intron | 45.0% | |
| TGTTCATCCAAACAGAGCCT+AGG | + | chr7_2:20598410-20598429 | Msa1052380:intron | 45.0% | |
| !! | CCACTATGGCTGTTTTCAAC+AGG | - | chr7_2:20598909-20598928 | None:intergenic | 45.0% |
| CCTGTTGAAAACAGCCATAG+TGG | + | chr7_2:20598906-20598925 | Msa1052380:CDS | 45.0% | |
| AAAACAGCCATAGTGGCAAG+CGG | + | chr7_2:20598913-20598932 | Msa1052380:CDS | 45.0% | |
| ATAACTGTTGTTGGAGCCTC+TGG | + | chr7_2:20599026-20599045 | Msa1052380:CDS | 45.0% | |
| TGGCAGCATTTCACCATTTG+TGG | + | chr7_2:20599212-20599231 | Msa1052380:intron | 45.0% | |
| GCCATGGCAGATATTGTTGA+CGG | + | chr7_2:20599619-20599638 | Msa1052380:CDS | 45.0% | |
| CCATGGCAGATATTGTTGAC+GGG | + | chr7_2:20599620-20599639 | Msa1052380:CDS | 45.0% | |
| ! | TGCCATGGCCAATTTTGTGA+AGG | + | chr7_2:20599655-20599674 | Msa1052380:CDS | 45.0% |
| ! | GCCAATTTTGTGAAGGATGG+CGG | + | chr7_2:20599662-20599681 | Msa1052380:CDS | 45.0% |
| CTGACATACAGGCCGAAATA+TGG | - | chr7_2:20599719-20599738 | None:intergenic | 45.0% | |
| ! | CGGCCTGTATGTCAGATTTT+TGG | + | chr7_2:20599724-20599743 | Msa1052380:CDS | 45.0% |
| AAGCAAACCAACGTTGCTGA+TGG | - | chr7_2:20599757-20599776 | None:intergenic | 45.0% | |
| !! | GACACTCATTTTGACACGGA+GGG | - | chr7_2:20599871-20599890 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7_2:20600113-20600132 | Msa1052380:intron | 45.0% |
| CAAGAAGCTGAATGAGCATG+AGG | + | chr7_2:20600291-20600310 | Msa1052380:CDS | 45.0% | |
| GCACCAGATAAGGTTCTATG+TGG | + | chr7_2:20600861-20600880 | Msa1052380:intron | 45.0% | |
| TGTGGGTAGCATACACATGT+TGG | + | chr7_2:20600879-20600898 | Msa1052380:intron | 45.0% | |
| TTTATTAGCAGACACCTGGC+CGG | - | chr7_2:20600939-20600958 | None:intergenic | 45.0% | |
| TCAAGCTTGTCAGCATCTTC+TGG | + | chr7_2:20601597-20601616 | Msa1052380:CDS | 45.0% | |
| CAAGCTTGTCAGCATCTTCT+GGG | + | chr7_2:20601598-20601617 | Msa1052380:CDS | 45.0% | |
| ! | TTGTCAGCATCTTCTGGGAA+TGG | + | chr7_2:20601603-20601622 | Msa1052380:CDS | 45.0% |
| TGAATGCTGCAAAGGAAGAG+AGG | - | chr7_2:20602247-20602266 | None:intergenic | 45.0% | |
| AGGGGTTTCCATTGCAAAGA+GGG | - | chr7_2:20602391-20602410 | None:intergenic | 45.0% | |
| CTCTGCATCCAAACTAACAG+GGG | - | chr7_2:20602409-20602428 | None:intergenic | 45.0% | |
| CCTCTGCATCCAAACTAACA+GGG | - | chr7_2:20602410-20602429 | None:intergenic | 45.0% | |
| TCCTCTGCATCCAAACTAAC+AGG | - | chr7_2:20602411-20602430 | None:intergenic | 45.0% | |
| GGTTGAACTAAACCACCCAA+AGG | - | chr7_2:20602635-20602654 | None:intergenic | 45.0% | |
| ! | GCTTAATGGATGTCAGGTCA+AGG | + | chr7_2:20602740-20602759 | Msa1052380:intron | 45.0% |
| !! | GGAAAGCATTACACACCAAG+AGG | + | chr7_2:20602964-20602983 | Msa1052380:CDS | 45.0% |
| AGTGCAGACTGCCGATATAT+CGG | + | chr7_2:20603168-20603187 | Msa1052380:intron | 45.0% | |
| TTGGATTCAGAGCCGAGATA+CGG | + | chr7_2:20603266-20603285 | Msa1052380:intron | 45.0% | |
| TTCCGATTGTACAGATTGCC+CGG | - | chr7_2:20603310-20603329 | None:intergenic | 45.0% | |
| ACCAGGGTTAGGAATGAAGT+TGG | + | chr7_2:20603420-20603439 | Msa1052380:CDS | 45.0% | |
| TCCAACTTCATTCCTAACCC+TGG | - | chr7_2:20603424-20603443 | None:intergenic | 45.0% | |
| AGCAACCTCTCATAAGCATC+TGG | - | chr7_2:20604026-20604045 | None:intergenic | 45.0% | |
| ! | ACCCCAGAGTACTATCCTTA+TGG | + | chr7_2:20604155-20604174 | Msa1052380:CDS | 45.0% |
| GCAAGATAGTGAGCACAAAC+CGG | - | chr7_2:20604191-20604210 | None:intergenic | 45.0% | |
| GGTTTGTGCTCACTATCTTG+CGG | + | chr7_2:20604190-20604209 | Msa1052380:CDS | 45.0% | |
| ! | TAACATCTGAGGCTGATCAC+AGG | - | chr7_2:20604285-20604304 | None:intergenic | 45.0% |
| TGTGAGCTAGCTAACATCTG+AGG | - | chr7_2:20604296-20604315 | None:intergenic | 45.0% | |
| !! | TTTGGTTTGGTGGAGGGAAT+TGG | + | chr7_2:20604471-20604490 | Msa1052380:three_prime_UTR | 45.0% |
| !! | TTGGTTTGGTGGAGGGAATT+GGG | + | chr7_2:20604472-20604491 | Msa1052380:three_prime_UTR | 45.0% |
| !! | ATATTATTTCATAAAATATT+GGG | - | chr7_2:20598447-20598466 | None:intergenic | 5.0% |
| !! | AATATTATTTCATAAAATAT+TGG | - | chr7_2:20598448-20598467 | None:intergenic | 5.0% |
| !! | TAAATATTTAAAAAAAAAAG+GGG | - | chr7_2:20601454-20601473 | None:intergenic | 5.0% |
| !! | ATAAACATTAAAATATTATT+CGG | - | chr7_2:20603982-20604001 | None:intergenic | 5.0% |
| GGAGAAAACGAGGATGTGAG+AGG | - | chr7_2:20597245-20597264 | None:intergenic | 50.0% | |
| GTGTGTGTTCGGAGAAAACG+AGG | - | chr7_2:20597255-20597274 | None:intergenic | 50.0% | |
| CCCACTACACCCCATTTCAA+TGG | - | chr7_2:20597671-20597690 | None:intergenic | 50.0% | |
| ! | TGGGGTGTAGTGGGGTTATT+TGG | + | chr7_2:20597677-20597696 | Msa1052380:intron | 50.0% |
| AATGGTGCACTAGGCATGTC+AGG | + | chr7_2:20597843-20597862 | Msa1052380:intron | 50.0% | |
| TCTGTGTGTTGTGTCGTGTC+TGG | + | chr7_2:20597974-20597993 | Msa1052380:intron | 50.0% | |
| ! | AGGGGTTACATTGGCTGCAA+CGG | - | chr7_2:20598889-20598908 | None:intergenic | 50.0% |
| CTATGAGGGTTGTCTGCCTA+AGG | + | chr7_2:20599094-20599113 | Msa1052380:CDS | 50.0% | |
| CCCGTCAACAATATCTGCCA+TGG | - | chr7_2:20599623-20599642 | None:intergenic | 50.0% | |
| !!! | GGGCTTTTGGCTTTTTGCCA+TGG | + | chr7_2:20599640-20599659 | Msa1052380:CDS | 50.0% |
| GCCGCCATCCTTCACAAAAT+TGG | - | chr7_2:20599666-20599685 | None:intergenic | 50.0% | |
| CAAACCAACGTTGCTGATGG+CGG | - | chr7_2:20599754-20599773 | None:intergenic | 50.0% | |
| !! | CGACACTCATTTTGACACGG+AGG | - | chr7_2:20599872-20599891 | None:intergenic | 50.0% |
| AATGAGCACAATCACGTGGC+AGG | - | chr7_2:20600475-20600494 | None:intergenic | 50.0% | |
| AACATCGGGACACGCATAAC+CGG | + | chr7_2:20600917-20600936 | Msa1052380:intron | 50.0% | |
| ! | GCACAGTGGAGAGCATACAT+AGG | - | chr7_2:20601325-20601344 | None:intergenic | 50.0% |
| ! | TCAGCATCTTCTGGGAATGG+TGG | + | chr7_2:20601606-20601625 | Msa1052380:CDS | 50.0% |
| ! | CATCTTCTGGGAATGGTGGT+TGG | + | chr7_2:20601610-20601629 | Msa1052380:CDS | 50.0% |
| ACTCAAGCAGTATCTGACCG+AGG | + | chr7_2:20601698-20601717 | Msa1052380:CDS | 50.0% | |
| !! | GATTTTGGTACCGAAGGACG+TGG | + | chr7_2:20602214-20602233 | Msa1052380:CDS | 50.0% |
| CAGGGGTTTCCATTGCAAAG+AGG | - | chr7_2:20602392-20602411 | None:intergenic | 50.0% | |
| ! | CCCTGTTAGTTTGGATGCAG+AGG | + | chr7_2:20602407-20602426 | Msa1052380:CDS | 50.0% |
| !! | TCTCTGAGGCATAGCTCAAG+TGG | - | chr7_2:20602656-20602675 | None:intergenic | 50.0% |
| AGCTATGCCTCAGAGACTCA+TGG | + | chr7_2:20602660-20602679 | Msa1052380:intron | 50.0% | |
| ATGCAACACCTCCTCTTGTG+TGG | - | chr7_2:20602824-20602843 | None:intergenic | 50.0% | |
| CACACCAAGAGGTAAGTGAG+AGG | + | chr7_2:20602975-20602994 | Msa1052380:intron | 50.0% | |
| CTACAGCACTGTACGCATAG+CGG | - | chr7_2:20603061-20603080 | None:intergenic | 50.0% | |
| CAGTCTGCACTATATCGTGG+TGG | - | chr7_2:20603159-20603178 | None:intergenic | 50.0% | |
| TGGATTCAGAGCCGAGATAC+GGG | + | chr7_2:20603267-20603286 | Msa1052380:intron | 50.0% | |
| CCTGAACTGTACCCGTATCT+CGG | - | chr7_2:20603281-20603300 | None:intergenic | 50.0% | |
| ! | GGTACAGTTCAGGAAAGTGC+CGG | + | chr7_2:20603288-20603307 | Msa1052380:CDS | 50.0% |
| !! | GTACAGTTCAGGAAAGTGCC+GGG | + | chr7_2:20603289-20603308 | Msa1052380:CDS | 50.0% |
| TGCCGGGCAATCTGTACAAT+CGG | + | chr7_2:20603305-20603324 | Msa1052380:CDS | 50.0% | |
| ATTCCCGCCACACATGATCA+TGG | + | chr7_2:20603868-20603887 | Msa1052380:intron | 50.0% | |
| GTGATGAACTCGATGCAGCT+TGG | + | chr7_2:20604087-20604106 | Msa1052380:CDS | 50.0% | |
| TCCTTATGGTAGTCGTGGTC+CGG | + | chr7_2:20604169-20604188 | Msa1052380:CDS | 50.0% | |
| GGCCAGATACAACGTACGAT+GGG | + | chr7_2:20604211-20604230 | Msa1052380:CDS | 50.0% | |
| GCCAGATACAACGTACGATG+GGG | + | chr7_2:20604212-20604231 | Msa1052380:CDS | 50.0% | |
| TTTGGTGGAGGGAATTGGGA+TGG | + | chr7_2:20604476-20604495 | Msa1052380:three_prime_UTR | 50.0% | |
| GGACAAGACAAGCAGCCCTT+CGG | + | chr7_2:20597181-20597200 | Msa1052380:five_prime_UTR | 55.0% | |
| GTTGCAACCGCTTGCCACTA+TGG | - | chr7_2:20598923-20598942 | None:intergenic | 55.0% | |
| CTTCTTGGCAAGGTCTCCAG+AGG | - | chr7_2:20599045-20599064 | None:intergenic | 55.0% | |
| GAGGGTTGTCTGCCTAAGGT+TGG | + | chr7_2:20599098-20599117 | Msa1052380:intron | 55.0% | |
| ! | TGTGAAGGATGGCGGCATCT+TGG | + | chr7_2:20599670-20599689 | Msa1052380:CDS | 55.0% |
| CTTGGCGCCATACTCGGATA+TGG | + | chr7_2:20599688-20599707 | Msa1052380:CDS | 55.0% | |
| GGCACTGCCATATCCGAGTA+TGG | - | chr7_2:20599698-20599717 | None:intergenic | 55.0% | |
| ATCTCCGCCATCAGCAACGT+TGG | + | chr7_2:20599747-20599766 | Msa1052380:intron | 55.0% | |
| ! | TTTGGTACCGAAGGACGTGG+CGG | + | chr7_2:20602217-20602236 | Msa1052380:CDS | 55.0% |
| CTTAACCCCGACATTTGCCG+CGG | + | chr7_2:20602884-20602903 | Msa1052380:CDS | 55.0% | |
| ATCTATGAAGAGGGCAGCCG+CGG | - | chr7_2:20602904-20602923 | None:intergenic | 55.0% | |
| CGGCAGTCTGCACTATATCG+TGG | - | chr7_2:20603162-20603181 | None:intergenic | 55.0% | |
| CCGAGATACGGGTACAGTTC+AGG | + | chr7_2:20603278-20603297 | Msa1052380:CDS | 55.0% | |
| ! | GATCATGTGTGGCGGGAATG+AGG | - | chr7_2:20603867-20603886 | None:intergenic | 55.0% |
| CGACCATGATCATGTGTGGC+GGG | - | chr7_2:20603874-20603893 | None:intergenic | 55.0% | |
| GCGACCATGATCATGTGTGG+CGG | - | chr7_2:20603875-20603894 | None:intergenic | 55.0% | |
| TGCGCGACCATGATCATGTG+TGG | - | chr7_2:20603878-20603897 | None:intergenic | 55.0% | |
| ACCGGACCACGACTACCATA+AGG | - | chr7_2:20604173-20604192 | None:intergenic | 55.0% | |
| CGGCCAGATACAACGTACGA+TGG | + | chr7_2:20604210-20604229 | Msa1052380:CDS | 55.0% | |
| GCCCCATCGTACGTTGTATC+TGG | - | chr7_2:20604216-20604235 | None:intergenic | 55.0% | |
| GGGTCTGCTCGTGTAGTTCG+TGG | + | chr7_2:20599524-20599543 | Msa1052380:intron | 60.0% | |
| CGGCATCTTGGCGCCATACT+CGG | + | chr7_2:20599682-20599701 | Msa1052380:CDS | 60.0% | |
| ! | TTGGTACCGAAGGACGTGGC+GGG | + | chr7_2:20602218-20602237 | Msa1052380:CDS | 60.0% |
| AGGTTACCCGCCACGTCCTT+CGG | - | chr7_2:20602227-20602246 | None:intergenic | 60.0% | |
| GTCGGGGTTAAGCTGCCCTT+TGG | - | chr7_2:20602876-20602895 | None:intergenic | 60.0% | |
| AACGTACGATGGGGCGACCT+TGG | + | chr7_2:20604221-20604240 | Msa1052380:CDS | 60.0% | |
| TATTGGCCATGGCGGCGCCA+TGG | + | chr7_2:20599603-20599622 | Msa1052380:CDS | 65.0% | |
| TATCTGCCATGGCGCCGCCA+TGG | - | chr7_2:20599612-20599631 | None:intergenic | 65.0% | |
| AGGGCAGCCGCGGCAAATGT+CGG | - | chr7_2:20602894-20602913 | None:intergenic | 65.0% | |
| CGGGACACGCATAACCGGCC+AGG | + | chr7_2:20600922-20600941 | Msa1052380:intron | 70.0% | |
| GGCAGCCGCGGCAAATGTCG+GGG | - | chr7_2:20602892-20602911 | None:intergenic | 70.0% | |
| GGGCAGCCGCGGCAAATGTC+GGG | - | chr7_2:20602893-20602912 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 20597168 | 20604623 | 20597168 | ID=Msa1052380;Name=Msa1052380 |
| chr7_2 | mRNA | 20597168 | 20604623 | 20597168 | ID=Msa1052380-mRNA-1;Parent=Msa1052380;Name=Msa1052380-mRNA-1;_AED=0.19;_eAED=0.19;_QI=167|0.8|0.90|0.90|1|1|11|361|652 |
| chr7_2 | exon | 20597168 | 20597512 | 20597168 | ID=Msa1052380-mRNA-1:exon:4656;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20598883 | 20599115 | 20598883 | ID=Msa1052380-mRNA-1:exon:4657;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20599218 | 20599312 | 20599218 | ID=Msa1052380-mRNA-1:exon:4658;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20599594 | 20599764 | 20599594 | ID=Msa1052380-mRNA-1:exon:4659;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20600198 | 20600312 | 20600198 | ID=Msa1052380-mRNA-1:exon:4660;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20601525 | 20601733 | 20601525 | ID=Msa1052380-mRNA-1:exon:4661;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20602090 | 20602239 | 20602090 | ID=Msa1052380-mRNA-1:exon:4662;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20602326 | 20602446 | 20602326 | ID=Msa1052380-mRNA-1:exon:4663;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20602756 | 20602985 | 20602756 | ID=Msa1052380-mRNA-1:exon:4664;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20603276 | 20603476 | 20603276 | ID=Msa1052380-mRNA-1:exon:4665;Parent=Msa1052380-mRNA-1 |
| chr7_2 | exon | 20604007 | 20604623 | 20604007 | ID=Msa1052380-mRNA-1:exon:4666;Parent=Msa1052380-mRNA-1 |
| chr7_2 | five_prime_UTR | 20597168 | 20597334 | 20597168 | ID=Msa1052380-mRNA-1:five_prime_utr;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20597335 | 20597512 | 20597335 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20598883 | 20599115 | 20598883 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20599218 | 20599312 | 20599218 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20599594 | 20599764 | 20599594 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20600198 | 20600312 | 20600198 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20601525 | 20601733 | 20601525 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20602090 | 20602239 | 20602090 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20602326 | 20602446 | 20602326 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20602756 | 20602985 | 20602756 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20603276 | 20603476 | 20603276 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | CDS | 20604007 | 20604262 | 20604007 | ID=Msa1052380-mRNA-1:cds;Parent=Msa1052380-mRNA-1 |
| chr7_2 | three_prime_UTR | 20604263 | 20604623 | 20604263 | ID=Msa1052380-mRNA-1:three_prime_utr;Parent=Msa1052380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
