Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010820 | XP_003621754.2 | 98.225 | 507 | 9 | 0 | 1 | 507 | 91 | 597 | 0.0 | 1047 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010820 | sp|Q9FY99|G6PD2_ARATH | 87.349 | 498 | 61 | 2 | 8 | 504 | 99 | 595 | 0.0 | 917 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010820 | G7KUS5 | 98.225 | 507 | 9 | 0 | 1 | 507 | 91 | 597 | 0.0 | 1047 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036610 | Msa1010820 | 0.833806 | 4.316300e-56 | -8.615850e-47 |
| Msa0179720 | Msa1010820 | -0.803362 | 3.614271e-49 | -8.615850e-47 |
| Msa1010820 | Msa1052380 | 0.951619 | 1.392423e-109 | -8.615850e-47 |
| Msa1010820 | Msa1078580 | 0.811762 | 5.954049e-51 | -8.615850e-47 |
| Msa1010820 | Msa1096180 | 0.920739 | 8.739016e-88 | -8.615850e-47 |
| Msa0306950 | Msa1010820 | -0.800831 | 1.198340e-48 | -8.615850e-47 |
| Msa0318600 | Msa1010820 | 0.831763 | 1.388160e-55 | -8.615850e-47 |
| Msa0564510 | Msa1010820 | -0.804439 | 2.158641e-49 | -8.615850e-47 |
| Msa0902980 | Msa1010820 | -0.801176 | 1.018817e-48 | -8.615850e-47 |
| Msa0968320 | Msa1010820 | 0.800187 | 1.621026e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010820 | MtrunA17_Chr7g0222441 | 98.225 | 507 | 9 | 0 | 1 | 507 | 91 | 597 | 0.0 | 1047 |
| Msa1010820 | MtrunA17_Chr8g0341321 | 84.394 | 487 | 75 | 1 | 18 | 504 | 96 | 581 | 0.0 | 863 |
| Msa1010820 | MtrunA17_Chr7g0271531 | 52.893 | 484 | 217 | 4 | 15 | 498 | 126 | 598 | 0.0 | 532 |
| Msa1010820 | MtrunA17_Chr7g0228611 | 51.235 | 486 | 213 | 6 | 17 | 493 | 29 | 499 | 7.73e-164 | 474 |
| Msa1010820 | MtrunA17_Chr6g0458971 | 50.311 | 483 | 216 | 6 | 17 | 490 | 32 | 499 | 2.64e-160 | 465 |
| Msa1010820 | MtrunA17_Chr8g0356781 | 77.928 | 222 | 44 | 1 | 286 | 502 | 1 | 222 | 7.79e-126 | 366 |
| Msa1010820 | MtrunA17_Chr8g0358431 | 87.368 | 190 | 24 | 0 | 149 | 338 | 16 | 205 | 1.97e-118 | 346 |
| Msa1010820 | MtrunA17_Chr8g0356771 | 78.667 | 150 | 18 | 1 | 149 | 284 | 16 | 165 | 1.79e-76 | 238 |
| Msa1010820 | MtrunA17_Chr8g0356701 | 86.792 | 106 | 14 | 0 | 251 | 356 | 1 | 106 | 4.21e-61 | 196 |
| Msa1010820 | MtrunA17_Chr8g0358411 | 81.915 | 94 | 17 | 0 | 409 | 502 | 1 | 94 | 2.86e-49 | 164 |
| Msa1010820 | MtrunA17_Chr4g0044781 | 65.789 | 76 | 23 | 1 | 350 | 422 | 4 | 79 | 1.38e-27 | 105 |
| Msa1010820 | MtrunA17_Chr7g0228591 | 35.714 | 182 | 85 | 5 | 16 | 189 | 9 | 166 | 3.64e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010820 | AT5G13110.1 | 87.349 | 498 | 61 | 2 | 8 | 504 | 99 | 595 | 0.0 | 917 |
| Msa1010820 | AT1G24280.1 | 87.398 | 492 | 61 | 1 | 13 | 504 | 108 | 598 | 0.0 | 901 |
| Msa1010820 | AT5G35790.1 | 80.612 | 490 | 94 | 1 | 13 | 502 | 86 | 574 | 0.0 | 841 |
| Msa1010820 | AT1G09420.1 | 51.000 | 500 | 233 | 3 | 1 | 500 | 137 | 624 | 0.0 | 532 |
| Msa1010820 | AT1G09420.2 | 49.804 | 510 | 234 | 4 | 1 | 500 | 137 | 634 | 0.0 | 522 |
| Msa1010820 | AT3G27300.1 | 51.230 | 488 | 209 | 8 | 17 | 493 | 31 | 500 | 1.99e-165 | 478 |
| Msa1010820 | AT3G27300.3 | 51.230 | 488 | 209 | 8 | 17 | 493 | 31 | 500 | 1.99e-165 | 478 |
| Msa1010820 | AT3G27300.2 | 51.230 | 488 | 209 | 8 | 17 | 493 | 31 | 500 | 1.99e-165 | 478 |
| Msa1010820 | AT3G27300.5 | 51.230 | 488 | 209 | 8 | 17 | 493 | 85 | 554 | 1.98e-164 | 478 |
| Msa1010820 | AT3G27300.4 | 51.230 | 488 | 209 | 8 | 17 | 493 | 102 | 571 | 5.30e-164 | 477 |
| Msa1010820 | AT5G40760.2 | 50.719 | 487 | 213 | 8 | 13 | 490 | 28 | 496 | 3.91e-162 | 470 |
| Msa1010820 | AT5G40760.1 | 50.719 | 487 | 213 | 8 | 13 | 490 | 28 | 496 | 3.91e-162 | 470 |
Find 155 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGTGTGGTTCTTATAT+TGG | 0.193945 | 7_1:+14129070 | None:intergenic |
| TTGGTTTGGTGGAGGGAATT+GGG | 0.206956 | 7_1:-14127409 | Msa1010820:three_prime_UTR |
| AATCTGTACAATCGGAATTT+TGG | 0.208150 | 7_1:-14128566 | Msa1010820:CDS |
| TTGATATTCTCAGAAGATTT+TGG | 0.217136 | 7_1:-14129681 | Msa1010820:CDS |
| ACAGCATCTATGAATATATT+AGG | 0.222301 | 7_1:+14130312 | None:intergenic |
| TTTGGTTTGGTGGAGGGAAT+TGG | 0.223654 | 7_1:-14127410 | Msa1010820:three_prime_UTR |
| TCAAGCTTGTCAGCATCTTC+TGG | 0.245037 | 7_1:-14130282 | Msa1010820:CDS |
| TGTAGGTACTTTGACAATTA+TGG | 0.250023 | 7_1:-14129558 | Msa1010820:intron |
| AAAAGATGTTTCTATCATTC+TGG | 0.258419 | 7_1:-14131720 | Msa1010820:CDS |
| TGCTGGAAATATCTTCTTCT+TGG | 0.264980 | 7_1:+14132620 | None:intergenic |
| GGCTTGTCCCTTTCCCTTGT+TGG | 0.276119 | 7_1:+14134528 | None:intergenic |
| CCATTACTCAATCACTATTA+TGG | 0.287622 | 7_1:-14134364 | Msa1010820:five_prime_UTR |
| TGGTTTGGTGGAGGGAATTG+GGG | 0.307845 | 7_1:-14127408 | Msa1010820:three_prime_UTR |
| TCCTCTGCATCCAAACTAAC+AGG | 0.311717 | 7_1:+14129471 | None:intergenic |
| GTCATTGTTGAAAAGCCTTT+TGG | 0.318392 | 7_1:-14130240 | Msa1010820:CDS |
| AACGACAATGAGTTGAATAA+AGG | 0.329442 | 7_1:+14134337 | None:intergenic |
| GGGCAGCCGCGGCAAATGTC+GGG | 0.355148 | 7_1:+14128989 | None:intergenic |
| GCTTGTCCCTTTCCCTTGTT+GGG | 0.362096 | 7_1:+14134529 | None:intergenic |
| TCGATTTGTGGTTTCTTGTT+TGG | 0.371868 | 7_1:-14127561 | Msa1010820:three_prime_UTR |
| CCGAGATACGGGTACAGTTC+AGG | 0.377664 | 7_1:-14128601 | Msa1010820:CDS |
| GATAAAACCGACAATAATTC+AGG | 0.379602 | 7_1:+14132735 | None:intergenic |
| TCAACACAATTTGTTGCAAC+AGG | 0.380137 | 7_1:-14134211 | Msa1010820:five_prime_UTR |
| CGAGTATGGCATAGTAATAT+TGG | 0.385946 | 7_1:-14127521 | Msa1010820:three_prime_UTR |
| ACCCCAGAGTACTATCCTTA+TGG | 0.387489 | 7_1:-14127724 | Msa1010820:CDS |
| ATAACTGTTGTTGGAGCCTC+TGG | 0.390269 | 7_1:-14132651 | Msa1010820:CDS |
| TTCAAATAAATACCTTCATC+CGG | 0.391157 | 7_1:+14128497 | None:intergenic |
| CTAACTCACATGTCGATTTG+TGG | 0.400770 | 7_1:-14127573 | Msa1010820:three_prime_UTR |
| TACAGGATCGATCACTATCT+TGG | 0.401089 | 7_1:-14129795 | Msa1010820:intron |
| ATCTTGAAATTGTATGACTT+TGG | 0.401663 | 7_1:-14127322 | Msa1010820:three_prime_UTR |
| AATGGAAACCCCTGTTAGTT+TGG | 0.405110 | 7_1:-14129481 | Msa1010820:CDS |
| CTATGAGGGTTGTCTGCCTA+AGG | 0.408589 | 7_1:-14132583 | Msa1010820:intron |
| ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 7_1:+14129099 | None:intergenic |
| TGATTGAGTAATGGAGGAAA+AGG | 0.420049 | 7_1:+14134373 | None:intergenic |
| TGGCAGCATTTCACCATTTG+TGG | 0.426179 | 7_1:-14132465 | Msa1010820:intron |
| GTTGCAACCGCTTGCCACTA+TGG | 0.429986 | 7_1:+14132757 | None:intergenic |
| AGAGAGAGACAGAGAGAGTT+CGG | 0.430654 | 7_1:+14134433 | None:intergenic |
| TTGCTTCTTGATGCAATTGA+AGG | 0.439881 | 7_1:-14127838 | Msa1010820:CDS |
| TTTGGTGGAGGGAATTGGGG+TGG | 0.440632 | 7_1:-14127405 | Msa1010820:three_prime_UTR |
| TCCTTATGGTAGTCGTGGTC+CGG | 0.442639 | 7_1:-14127710 | Msa1010820:CDS |
| CAAGCTTGTCAGCATCTTCT+GGG | 0.450107 | 7_1:-14130281 | Msa1010820:CDS |
| CATCTTCTGGGAATGGTGGT+TGG | 0.452748 | 7_1:-14130269 | Msa1010820:CDS |
| AGCAACCTCTCATAAGCATC+TGG | 0.454571 | 7_1:+14127856 | None:intergenic |
| TGCCGGGCAATCTGTACAAT+CGG | 0.462688 | 7_1:-14128574 | Msa1010820:CDS |
| TTACCTCTTATCAATTCTAC+AGG | 0.462844 | 7_1:+14132383 | None:intergenic |
| GTCTTCAACTTTAGATTCCA+TGG | 0.463512 | 7_1:+14132710 | None:intergenic |
| GTCGGGGTTAAGCTGCCCTT+TGG | 0.467588 | 7_1:+14129006 | None:intergenic |
| GATTGAGTAATGGAGGAAAA+GGG | 0.472412 | 7_1:+14134374 | None:intergenic |
| AGTTGAAGACGGTGTTGAAA+AGG | 0.473134 | 7_1:-14132697 | Msa1010820:CDS |
| TGATGCAGAACTGAGAAATA+TGG | 0.475269 | 7_1:-14132421 | Msa1010820:CDS |
| GAGGAATTGAAAGATAAAAC+AGG | 0.478809 | 7_1:+14130334 | None:intergenic |
| AGGGGTTTCCATTGCAAAGA+GGG | 0.478932 | 7_1:+14129491 | None:intergenic |
| AGAGAACTGCAGTGAAAAGA+TGG | 0.483255 | 7_1:-14131754 | Msa1010820:CDS |
| AGGTTACCCGCCACGTCCTT+CGG | 0.484081 | 7_1:+14129656 | None:intergenic |
| TTCCGATTGTACAGATTGCC+CGG | 0.484990 | 7_1:+14128572 | None:intergenic |
| CTCTTCTATCTCATTCAACA+CGG | 0.486759 | 7_1:+14127756 | None:intergenic |
| TACCATAAGGATAGTACTCT+GGG | 0.486791 | 7_1:+14127722 | None:intergenic |
| TTCTGGCCAATATGATTCTC+CGG | 0.488197 | 7_1:-14131703 | Msa1010820:CDS |
| AACGTACGATGGGGTGACCT+TGG | 0.488416 | 7_1:-14127658 | Msa1010820:CDS |
| AAACAGTAGCAGCAAGAAAA+CGG | 0.488875 | 7_1:+14134244 | None:intergenic |
| TTGGATTCAGAGCCGAGATA+CGG | 0.488957 | 7_1:-14128613 | Msa1010820:intron |
| GAGATCTCCGAAGGGCTGCT+TGG | 0.489218 | 7_1:+14134507 | None:intergenic |
| ACTGTTAGTATAACTGTTGT+TGG | 0.491948 | 7_1:-14132660 | Msa1010820:CDS |
| GATGGAAACGAAGAAGAAGA+AGG | 0.496348 | 7_1:+14134309 | None:intergenic |
| ACTTCGAGCATAACCACAAA+TGG | 0.497023 | 7_1:+14132452 | None:intergenic |
| TTACCTGTAGAATTGATAAG+AGG | 0.497788 | 7_1:-14132386 | Msa1010820:intron |
| CTTCATAGATAATGCAAGAT+GGG | 0.499428 | 7_1:-14128965 | Msa1010820:CDS |
| CCTGAACTGTACCCGTATCT+CGG | 0.502242 | 7_1:+14128601 | None:intergenic |
| ACGACAATGAGTTGAATAAA+GGG | 0.503154 | 7_1:+14134338 | None:intergenic |
| AGAGGACATTAGAAATGAAA+AGG | 0.504615 | 7_1:-14129454 | Msa1010820:intron |
| TAGAGAAAGTAACAGCAGAT+TGG | 0.506304 | 7_1:+14134268 | None:intergenic |
| AGTAACAGCAGATTGGTTAG+AGG | 0.507490 | 7_1:+14134275 | None:intergenic |
| CTACCATAAGGATAGTACTC+TGG | 0.507992 | 7_1:+14127721 | None:intergenic |
| CCCTGTTAGTTTGGATGCAG+AGG | 0.514673 | 7_1:-14129472 | Msa1010820:CDS |
| TTAGAGGACAAAGAAGAAGA+TGG | 0.516185 | 7_1:+14134291 | None:intergenic |
| TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 7_1:-14128960 | Msa1010820:CDS |
| ACCAGGGTTAGGAATGAAGT+TGG | 0.519128 | 7_1:-14128459 | Msa1010820:CDS |
| CATAGTAATATTGGTATGGT+AGG | 0.520610 | 7_1:-14127512 | Msa1010820:three_prime_UTR |
| AGGGCAGCCGCGGCAAATGT+CGG | 0.521873 | 7_1:+14128988 | None:intergenic |
| GCAAGATAGTGAGCACAAAC+CGG | 0.522419 | 7_1:+14127691 | None:intergenic |
| AACAACAAAATACCAGGGTT+AGG | 0.522580 | 7_1:-14128470 | Msa1010820:CDS |
| AAACCTGAAAATTTGATCCT+CGG | 0.524458 | 7_1:+14130164 | None:intergenic |
| GATTCTGAATCACGACCAAA+AGG | 0.526905 | 7_1:+14130225 | None:intergenic |
| ATAAAAGTTCAGCCGGATGA+AGG | 0.527613 | 7_1:-14128509 | Msa1010820:CDS |
| CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 7_1:-14129781 | Msa1010820:CDS |
| GTTGCAACCTGAATTATTGT+CGG | 0.530202 | 7_1:-14132742 | Msa1010820:five_prime_UTR |
| TTGGTACCGAAGGACGTGGC+GGG | 0.530531 | 7_1:-14129662 | Msa1010820:intron |
| TGGATTCAGAGCCGAGATAC+GGG | 0.534980 | 7_1:-14128612 | Msa1010820:intron |
| ACCGGACCACGACTACCATA+AGG | 0.535565 | 7_1:+14127709 | None:intergenic |
| AATACTAACCCTCTTTGCAA+TGG | 0.536733 | 7_1:-14129499 | Msa1010820:CDS |
| GGACAAGCCAAGCAGCCCTT+CGG | 0.537297 | 7_1:-14134514 | Msa1010820:five_prime_UTR |
| TTGTCAGCATCTTCTGGGAA+TGG | 0.537525 | 7_1:-14130276 | Msa1010820:CDS |
| ACTTGTTATAAAAGTTCAGC+CGG | 0.538788 | 7_1:-14128516 | Msa1010820:CDS |
| ATGGCATAGTAATATTGGTA+TGG | 0.546283 | 7_1:-14127516 | Msa1010820:three_prime_UTR |
| TCAACACCCAACAAGGGAAA+GGG | 0.548764 | 7_1:-14134535 | None:intergenic |
| TTCAACACCCAACAAGGGAA+AGG | 0.549303 | 7_1:-14134536 | None:intergenic |
| ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 7_1:-14128961 | Msa1010820:CDS |
| ATTTGTAGCATGATCAAGAT+CGG | 0.550956 | 7_1:+14128541 | None:intergenic |
| GGTACAGTTCAGGAAAGTGC+CGG | 0.553447 | 7_1:-14128591 | Msa1010820:CDS |
| AAAATCAACAACAAAATACC+AGG | 0.554633 | 7_1:-14128476 | Msa1010820:CDS |
| TACTATCCTTATGGTAGTCG+TGG | 0.555266 | 7_1:-14127715 | Msa1010820:CDS |
| GGCCAGATACAACGTACGAT+GGG | 0.555526 | 7_1:-14127668 | Msa1010820:CDS |
| TAAATCTTCATTATGCAGCA+AGG | 0.559935 | 7_1:-14128424 | Msa1010820:intron |
| CTTCTTGGCAAGATCTCCAG+AGG | 0.565324 | 7_1:+14132635 | None:intergenic |
| CCATAATAGTGATTGAGTAA+TGG | 0.566688 | 7_1:+14134364 | None:intergenic |
| TCTTCATAGATAATGCAAGA+TGG | 0.568560 | 7_1:-14128966 | Msa1010820:CDS |
| TAACATCTGAGGCTGATCAC+AGG | 0.570436 | 7_1:+14127597 | None:intergenic |
| TTGTCCTTCAACACCCAACA+AGG | 0.571891 | 7_1:-14134542 | None:intergenic |
| ATCTATGAAGAGGGCAGCCG+CGG | 0.574298 | 7_1:+14128978 | None:intergenic |
| TCTTCTATCTCATTCAACAC+GGG | 0.574817 | 7_1:+14127757 | None:intergenic |
| TCAGCATCTTCTGGGAATGG+TGG | 0.580103 | 7_1:-14130273 | Msa1010820:CDS |
| ATGCAACACCTCCTCTTGTG+TGG | 0.580289 | 7_1:+14129058 | None:intergenic |
| GTGATGAACTCGATGCTGCT+TGG | 0.580532 | 7_1:-14127792 | Msa1010820:CDS |
| TGATGACAAAACTGTACCAA+AGG | 0.580864 | 7_1:-14129022 | Msa1010820:CDS |
| TGACAATGGCATGTAAATGC+AGG | 0.580921 | 7_1:-14132816 | Msa1010820:intron |
| AAGACTCTTGAGATCTCCGA+AGG | 0.583034 | 7_1:+14134498 | None:intergenic |
| TGTTTATTTCAGATACTCGA+AGG | 0.586434 | 7_1:-14127884 | Msa1010820:intron |
| GTTGAAGAAGAGGAAGAAGA+AGG | 0.587129 | 7_1:+14134466 | None:intergenic |
| GATGACAAAACTGTACCAAA+GGG | 0.590628 | 7_1:-14129021 | Msa1010820:CDS |
| TGATCTTGTTAAAGCAGCTG+AGG | 0.594578 | 7_1:+14130203 | None:intergenic |
| GTACAGTTCAGGAAAGTGCC+GGG | 0.595881 | 7_1:-14128590 | Msa1010820:CDS |
| CCTGTTGAAAACAGCCATAG+TGG | 0.598255 | 7_1:-14132771 | Msa1010820:five_prime_UTR |
| AGATAATGCAAGATGGGATG+GGG | 0.599941 | 7_1:-14128959 | Msa1010820:CDS |
| CCTCTGCATCCAAACTAACA+GGG | 0.600678 | 7_1:+14129472 | None:intergenic |
| ATCTTGCATTATCTATGAAG+AGG | 0.601254 | 7_1:+14128968 | None:intergenic |
| CAGGGGTTTCCATTGCAAAG+AGG | 0.602818 | 7_1:+14129490 | None:intergenic |
| TCCAACTTCATTCCTAACCC+TGG | 0.603899 | 7_1:+14128458 | None:intergenic |
| ATTTCTCTACATCTAATCCA+AGG | 0.604021 | 7_1:+14127641 | None:intergenic |
| TAATAGTGATTGAGTAATGG+AGG | 0.608650 | 7_1:+14134367 | None:intergenic |
| GCATCTATGAATATATTAGG+AGG | 0.613908 | 7_1:+14130315 | None:intergenic |
| GGCAGCCGCGGCAAATGTCG+GGG | 0.616181 | 7_1:+14128990 | None:intergenic |
| TCTTGCATTATCTATGAAGA+GGG | 0.616374 | 7_1:+14128969 | None:intergenic |
| CTTAACCCCGACATTTGCCG+CGG | 0.616851 | 7_1:-14128995 | Msa1010820:CDS |
| TATAAGAACCACACAAGAGG+AGG | 0.626347 | 7_1:-14129066 | Msa1010820:CDS |
| CAAGAAGCTGAATGAACATG+AGG | 0.635311 | 7_1:-14131661 | Msa1010820:intron |
| CAATATAAGAACCACACAAG+AGG | 0.636087 | 7_1:-14129069 | Msa1010820:CDS |
| ATGGAATCTAAAGTTGAAGA+CGG | 0.647646 | 7_1:-14132708 | Msa1010820:CDS |
| AATGAAGATTTAAATTACTG+CGG | 0.648676 | 7_1:+14128435 | None:intergenic |
| TATGAGACCGATTAAACTCG+AGG | 0.649881 | 7_1:-14129106 | Msa1010820:CDS |
| GGTTTGTGCTCACTATCTTG+CGG | 0.651306 | 7_1:-14127689 | Msa1010820:CDS |
| CAGGCGCAACAAAATATGAA+CGG | 0.653910 | 7_1:+14127616 | None:intergenic |
| CTCTGCATCCAAACTAACAG+GGG | 0.654249 | 7_1:+14129473 | None:intergenic |
| TTTGGTACCGAAGGACGTGG+CGG | 0.661444 | 7_1:-14129663 | Msa1010820:CDS |
| GCCAGATACAACGTACGATG+GGG | 0.669406 | 7_1:-14127667 | Msa1010820:CDS |
| AGATACCAGATGCTTATGAG+AGG | 0.670335 | 7_1:-14127861 | Msa1010820:CDS |
| GGAAAGCATTACACACCAAG+AGG | 0.670420 | 7_1:-14128915 | Msa1010820:intron |
| TGTGAGTTAGCTAACATCTG+AGG | 0.681526 | 7_1:+14127586 | None:intergenic |
| AAAACAGCCATAGTGGCAAG+CGG | 0.681835 | 7_1:-14132764 | Msa1010820:five_prime_UTR |
| ATGTATTGCCTCGACCACAA+AGG | 0.685820 | 7_1:+14129717 | None:intergenic |
| AGACTCTTGAGATCTCCGAA+GGG | 0.686381 | 7_1:+14134499 | None:intergenic |
| TAATCGGTCTCATAGAACGA+AGG | 0.698002 | 7_1:+14129115 | None:intergenic |
| AAATCAACAACAAAATACCA+GGG | 0.703547 | 7_1:-14128475 | Msa1010820:CDS |
| TGTCCTTCAACACCCAACAA+GGG | 0.706241 | 7_1:-14134541 | None:intergenic |
| TTCAACTTTAGATTCCATGG+AGG | 0.714477 | 7_1:+14132713 | None:intergenic |
| ACTCAAGCAGTATCTGACCG+AGG | 0.738694 | 7_1:-14130181 | Msa1010820:CDS |
| ACCATAAGGATAGTACTCTG+GGG | 0.757794 | 7_1:+14127723 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr7_1:14130360-14130379 | None:intergenic | 0.0% |
| !!! | TTTAAATATTTTAAAAAAAA+GGG | + | chr7_1:14131388-14131407 | None:intergenic | 0.0% |
| !!! | TTTTAAATATTTTAAAAAAA+AGG | + | chr7_1:14131389-14131408 | None:intergenic | 0.0% |
| !!! | TGTTATAATATTATTTTAGA+GGG | - | chr7_1:14127945-14127964 | Msa1010820:intron | 10.0% |
| !!! | TGTAAATTTTGAATCTTTTT+TGG | - | chr7_1:14127683-14127702 | Msa1010820:CDS | 15.0% |
| !!! | GTGTTATAATATTATTTTAG+AGG | - | chr7_1:14127944-14127963 | Msa1010820:intron | 15.0% |
| !!! | TTTTTTCAAATTATCATCAT+TGG | - | chr7_1:14128082-14128101 | Msa1010820:intron | 15.0% |
| !! | AATTTATATATGACTTTCTT+AGG | - | chr7_1:14128659-14128678 | Msa1010820:intron | 15.0% |
| !! | TTTATATTATAGTATGTCAT+TGG | - | chr7_1:14128954-14128973 | Msa1010820:CDS | 15.0% |
| !!! | TGTTTTTGTTTTGTATATTT+TGG | - | chr7_1:14129275-14129294 | Msa1010820:intron | 15.0% |
| !!! | CAAAATGTTTTTATATAAGT+TGG | - | chr7_1:14130651-14130670 | Msa1010820:intron | 15.0% |
| !!! | AATTTTATTTCTTCTACATT+AGG | + | chr7_1:14130926-14130945 | None:intergenic | 15.0% |
| !! | ATCATTTAACATTTAAACTT+AGG | + | chr7_1:14131205-14131224 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTGCTTAAATTTA+AGG | - | chr7_1:14132491-14132510 | Msa1010820:intron | 15.0% |
| !!! | ATTTGAAACAAATGAATTTA+AGG | + | chr7_1:14132625-14132644 | None:intergenic | 15.0% |
| !!! | ATTAAACTTCTAAATTGTTT+TGG | - | chr7_1:14133179-14133198 | Msa1010820:intron | 15.0% |
| !! | ATTAAAATATTATTCGGAAA+AGG | + | chr7_1:14133908-14133927 | None:intergenic | 15.0% |
| !!! | GAGATTTTTCATTTTATTTT+TGG | - | chr7_1:14134383-14134402 | Msa1010820:five_prime_UTR | 15.0% |
| !!! | TTTTCATTTTATTTTTGGTT+TGG | - | chr7_1:14134388-14134407 | Msa1010820:five_prime_UTR | 15.0% |
| !! | TTTACACAAAACAAACAAAA+GGG | + | chr7_1:14127669-14127688 | None:intergenic | 20.0% |
| !! | ATTTACACAAAACAAACAAA+AGG | + | chr7_1:14127670-14127689 | None:intergenic | 20.0% |
| !! | GTTTAATCATATCTCAATAA+GGG | - | chr7_1:14128275-14128294 | Msa1010820:intron | 20.0% |
| !!! | ACTTATTTAACTTTAGTTAC+TGG | - | chr7_1:14128311-14128330 | Msa1010820:intron | 20.0% |
| !! | GAATAACTATCTATTAAGTT+GGG | + | chr7_1:14128795-14128814 | None:intergenic | 20.0% |
| !! | TGAATAACTATCTATTAAGT+TGG | + | chr7_1:14128796-14128815 | None:intergenic | 20.0% |
| !!! | GTTTTGTATATTTTGGAAAT+TGG | - | chr7_1:14129282-14129301 | Msa1010820:intron | 20.0% |
| !!! | AGAAACATCTTTTAAGAAAT+TGG | + | chr7_1:14130084-14130103 | None:intergenic | 20.0% |
| !!! | AACCATTTAAGATATTGTTT+TGG | + | chr7_1:14130183-14130202 | None:intergenic | 20.0% |
| !! | GTTTAATATATTACTCAATG+TGG | - | chr7_1:14130200-14130219 | Msa1010820:CDS | 20.0% |
| !! | TCAATTAACAATATTCTAAC+TGG | - | chr7_1:14130501-14130520 | Msa1010820:intron | 20.0% |
| !! | AGAATAGATGATAAGAATAA+AGG | - | chr7_1:14130980-14130999 | Msa1010820:intron | 20.0% |
| !! | AAGAATATAATGATGTGATT+AGG | + | chr7_1:14131235-14131254 | None:intergenic | 20.0% |
| !!! | AATACAAAAATTGCTTTTGT+AGG | - | chr7_1:14131435-14131454 | Msa1010820:intron | 20.0% |
| !!! | ATACAAAAATTGCTTTTGTA+GGG | - | chr7_1:14131436-14131455 | Msa1010820:intron | 20.0% |
| !!! | CTAATTATCTGTAGATTTTA+AGG | - | chr7_1:14131958-14131977 | Msa1010820:intron | 20.0% |
| !!! | TAAAGTGCTTTATGTAAAAT+GGG | - | chr7_1:14131985-14132004 | Msa1010820:intron | 20.0% |
| !!! | TGGTTATATACTTTTGTTAT+AGG | - | chr7_1:14132387-14132406 | Msa1010820:CDS | 20.0% |
| !!! | TACTTTTCTGCTTATATTTA+AGG | + | chr7_1:14132447-14132466 | None:intergenic | 20.0% |
| !! | TTAGAAGTTTAATAGAAAGA+TGG | + | chr7_1:14133172-14133191 | None:intergenic | 20.0% |
| !! | AATGAAGATTTAAATTACTG+CGG | + | chr7_1:14133379-14133398 | None:intergenic | 20.0% |
| !! | TCAAACAAAATCAACTTTAT+GGG | - | chr7_1:14133424-14133443 | Msa1010820:intron | 20.0% |
| !! | AATATCTTTGTTAATCTTCT+TGG | - | chr7_1:14133500-14133519 | Msa1010820:intron | 20.0% |
| !!! | TTTGAATGTATTTTGAATAG+AGG | - | chr7_1:14134451-14134470 | Msa1010820:five_prime_UTR | 20.0% |
| !!! | TTGAATGTATTTTGAATAGA+GGG | - | chr7_1:14134452-14134471 | Msa1010820:five_prime_UTR | 20.0% |
| !! | AGCTTATTGTTTGAGTTTAA+TGG | - | chr7_1:14127712-14127731 | Msa1010820:CDS | 25.0% |
| ! | GAGAAATAGTGAATTCATAT+TGG | + | chr7_1:14127776-14127795 | None:intergenic | 25.0% |
| ! | TCCAATAACAATCATGTATT+TGG | + | chr7_1:14127840-14127859 | None:intergenic | 25.0% |
| !!! | ATTTTAGAGGGTAATAATAG+AGG | - | chr7_1:14127957-14127976 | Msa1010820:intron | 25.0% |
| ! | CGTTTAATCATATCTCAATA+AGG | - | chr7_1:14128274-14128293 | Msa1010820:intron | 25.0% |
| !! | ATATATCTAAAATTTGCACC+TGG | - | chr7_1:14128711-14128730 | Msa1010820:intron | 25.0% |
| !!! | TGAAAGTTTTGATTTGTGTT+GGG | - | chr7_1:14128915-14128934 | Msa1010820:intron | 25.0% |
| ! | ATTGGTTATGTGTATGTATT+TGG | - | chr7_1:14129300-14129319 | Msa1010820:intron | 25.0% |
| ! | TTGGTTATGTGTATGTATTT+GGG | - | chr7_1:14129301-14129320 | Msa1010820:intron | 25.0% |
| !!! | TGAACTGTCTATTTTTTTCA+TGG | - | chr7_1:14129326-14129345 | Msa1010820:intron | 25.0% |
| ! | AGCAAAATTTGAACAAACTA+CGG | - | chr7_1:14129605-14129624 | Msa1010820:intron | 25.0% |
| !! | TGCTTTCTTTATCTTTTCTT+GGG | - | chr7_1:14129688-14129707 | Msa1010820:CDS | 25.0% |
| ! | AACTTAGGATTTCTCATTAT+GGG | - | chr7_1:14129913-14129932 | Msa1010820:intron | 25.0% |
| !!! | AGTTTCTTATTTGTTATGCT+TGG | - | chr7_1:14129991-14130010 | Msa1010820:intron | 25.0% |
| !!! | GTTTCTTATTTGTTATGCTT+GGG | - | chr7_1:14129992-14130011 | Msa1010820:intron | 25.0% |
| !! | ATGTTTGAGAATTTTTGTTG+TGG | - | chr7_1:14130026-14130045 | Msa1010820:intron | 25.0% |
| !! | AAAAGATGTTTCTATCATTC+TGG | - | chr7_1:14130091-14130110 | Msa1010820:intron | 25.0% |
| ! | TTATACAGAAAGACAAATGT+TGG | - | chr7_1:14130458-14130477 | Msa1010820:intron | 25.0% |
| !!! | TTGGTTTTCATAAACTTGTA+GGG | - | chr7_1:14130670-14130689 | Msa1010820:intron | 25.0% |
| !! | ATTAGGTTGTTTATCAAAAC+AGG | + | chr7_1:14130697-14130716 | None:intergenic | 25.0% |
| ! | AACCTAATTAAGAGAACATA+TGG | - | chr7_1:14130709-14130728 | Msa1010820:intron | 25.0% |
| ! | ATCCATATGTTCTCTTAATT+AGG | + | chr7_1:14130714-14130733 | None:intergenic | 25.0% |
| ! | TTCTACATTAGGAAAATACT+GGG | + | chr7_1:14130915-14130934 | None:intergenic | 25.0% |
| ! | AGATGATAAGAATAAAGGAA+TGG | - | chr7_1:14130985-14131004 | Msa1010820:intron | 25.0% |
| !!! | CCTTGTTTTCTTTATTCTTA+AGG | + | chr7_1:14131014-14131033 | None:intergenic | 25.0% |
| ! | CCTTAAGAATAAAGAAAACA+AGG | - | chr7_1:14131011-14131030 | Msa1010820:intron | 25.0% |
| !! | TATAGAGATGACATTTTATG+TGG | + | chr7_1:14131062-14131081 | None:intergenic | 25.0% |
| ! | ACTCAGTATATGAATAATGA+AGG | - | chr7_1:14131330-14131349 | Msa1010820:intron | 25.0% |
| ! | ACAGCATCTATGAATATATT+AGG | + | chr7_1:14131502-14131521 | None:intergenic | 25.0% |
| !! | CTGTTTTCATAAGCTTATAT+TGG | - | chr7_1:14131807-14131826 | Msa1010820:intron | 25.0% |
| !!! | AACAATCTTAGAAGTGTTTA+TGG | - | chr7_1:14131898-14131917 | Msa1010820:intron | 25.0% |
| !! | GTAAAGTGCTTTATGTAAAA+TGG | - | chr7_1:14131984-14132003 | Msa1010820:intron | 25.0% |
| ! | TAAAATGGGAAACATTATAC+AGG | - | chr7_1:14131999-14132018 | Msa1010820:intron | 25.0% |
| ! | CAAAAATGAGATTTGAGAAT+CGG | + | chr7_1:14132072-14132091 | None:intergenic | 25.0% |
| !! | TTGATATTCTCAGAAGATTT+TGG | - | chr7_1:14132130-14132149 | Msa1010820:intron | 25.0% |
| ! | CACTTATTCTGATCTTAAAA+TGG | - | chr7_1:14132198-14132217 | Msa1010820:intron | 25.0% |
| !! | TTTATATCTTTTCCACATGT+AGG | - | chr7_1:14132236-14132255 | Msa1010820:intron | 25.0% |
| !! | TTTCTGCTTATATTTAAGGT+CGG | + | chr7_1:14132443-14132462 | None:intergenic | 25.0% |
| ! | GCAAAAAAAGTTCATGTATT+TGG | + | chr7_1:14132482-14132501 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTAAATTTAAGGC+CGG | - | chr7_1:14132495-14132514 | Msa1010820:intron | 25.0% |
| ! | TTCAAATAAATACCTTCATC+CGG | + | chr7_1:14133317-14133336 | None:intergenic | 25.0% |
| ! | AAAATCAACAACAAAATACC+AGG | - | chr7_1:14133335-14133354 | Msa1010820:intron | 25.0% |
| ! | AAATCAACAACAAAATACCA+GGG | - | chr7_1:14133336-14133355 | Msa1010820:intron | 25.0% |
| ! | CTCAAACAAAATCAACTTTA+TGG | - | chr7_1:14133423-14133442 | Msa1010820:intron | 25.0% |
| !! | TTCTAACGGAATGTATTTTT+GGG | + | chr7_1:14133452-14133471 | None:intergenic | 25.0% |
| !! | TTTCTAACGGAATGTATTTT+TGG | + | chr7_1:14133453-14133472 | None:intergenic | 25.0% |
| !!! | GATGTTCTCTTATTTTCTAA+CGG | + | chr7_1:14133466-14133485 | None:intergenic | 25.0% |
| ! | AATAAGAGAACATCTCATTA+TGG | - | chr7_1:14133472-14133491 | Msa1010820:intron | 25.0% |
| ! | AATAATAGCAATAAGAGATG+TGG | + | chr7_1:14133576-14133595 | None:intergenic | 25.0% |
| !!! | CATGATTTTTCATCTTGTTT+AGG | - | chr7_1:14133604-14133623 | Msa1010820:intron | 25.0% |
| ! | AATGTGTGTCAAATATCATA+TGG | + | chr7_1:14133857-14133876 | None:intergenic | 25.0% |
| !! | GTTTAATTTCACTGCATTAA+TGG | + | chr7_1:14133886-14133905 | None:intergenic | 25.0% |
| !!! | TCATTTTATTTTTGGTTTGG+TGG | - | chr7_1:14134391-14134410 | Msa1010820:five_prime_UTR | 25.0% |
| ! | ATCTTGAAATTGTATGACTT+TGG | - | chr7_1:14134489-14134508 | Msa1010820:five_prime_UTR | 25.0% |
| TAATAGTGATTGAGTAATGG+AGG | + | chr7_1:14127447-14127466 | None:intergenic | 30.0% | |
| CCATAATAGTGATTGAGTAA+TGG | + | chr7_1:14127450-14127469 | None:intergenic | 30.0% | |
| CCATTACTCAATCACTATTA+TGG | - | chr7_1:14127447-14127466 | Msa1010820:three_prime_UTR | 30.0% | |
| ! | ACGACAATGAGTTGAATAAA+GGG | + | chr7_1:14127476-14127495 | None:intergenic | 30.0% |
| ! | AACGACAATGAGTTGAATAA+AGG | + | chr7_1:14127477-14127496 | None:intergenic | 30.0% |
| TCCATGTTATACCATTGAAA+TGG | - | chr7_1:14127794-14127813 | Msa1010820:CDS | 30.0% | |
| CCATGTTATACCATTGAAAT+GGG | - | chr7_1:14127795-14127814 | Msa1010820:CDS | 30.0% | |
| CATGTTATACCATTGAAATG+GGG | - | chr7_1:14127796-14127815 | Msa1010820:CDS | 30.0% | |
| GCCAAATACATGATTGTTAT+TGG | - | chr7_1:14127836-14127855 | Msa1010820:CDS | 30.0% | |
| AAAAATAAGATACACACCGA+AGG | + | chr7_1:14127886-14127905 | None:intergenic | 30.0% | |
| TTAAATAAGTCTATCCGAAC+AGG | + | chr7_1:14128301-14128320 | None:intergenic | 30.0% | |
| ! | GACGACTATTCAAACTTTTA+AGG | - | chr7_1:14128629-14128648 | Msa1010820:intron | 30.0% |
| !! | GACTATTCAAACTTTTAAGG+TGG | - | chr7_1:14128632-14128651 | Msa1010820:intron | 30.0% |
| TCGACGTATTATAAAATGGA+TGG | + | chr7_1:14128873-14128892 | None:intergenic | 30.0% | |
| CATGTCGACGTATTATAAAA+TGG | + | chr7_1:14128877-14128896 | None:intergenic | 30.0% | |
| !!! | GTGAAAGTTTTGATTTGTGT+TGG | - | chr7_1:14128914-14128933 | Msa1010820:intron | 30.0% |
| !!! | GAAAGTTTTGATTTGTGTTG+GGG | - | chr7_1:14128916-14128935 | Msa1010820:CDS | 30.0% |
| GATAAAACCGACAATAATTC+AGG | + | chr7_1:14129079-14129098 | None:intergenic | 30.0% | |
| ! | ATGGAATCTAAAGTTGAAGA+CGG | - | chr7_1:14129103-14129122 | Msa1010820:CDS | 30.0% |
| ACTGTTAGTATAACTGTTGT+TGG | - | chr7_1:14129151-14129170 | Msa1010820:intron | 30.0% | |
| ! | ACTTTTTGCACTTTACTATG+AGG | - | chr7_1:14129213-14129232 | Msa1010820:intron | 30.0% |
| ! | CTTTTTGCACTTTACTATGA+GGG | - | chr7_1:14129214-14129233 | Msa1010820:intron | 30.0% |
| TTACCTGTAGAATTGATAAG+AGG | - | chr7_1:14129425-14129444 | Msa1010820:intron | 30.0% | |
| TTACCTCTTATCAATTCTAC+AGG | + | chr7_1:14129431-14129450 | None:intergenic | 30.0% | |
| ! | GTGCTTTCTTTATCTTTTCT+TGG | - | chr7_1:14129687-14129706 | Msa1010820:CDS | 30.0% |
| ! | GCTTTCTTTATCTTTTCTTG+GGG | - | chr7_1:14129689-14129708 | Msa1010820:CDS | 30.0% |
| ! | TTTATCTTTTCTTGGGGTTA+TGG | - | chr7_1:14129695-14129714 | Msa1010820:CDS | 30.0% |
| !! | TGATTCAGGTTGTCAAATAT+TGG | - | chr7_1:14129720-14129739 | Msa1010820:CDS | 30.0% |
| GAACTTAGGATTTCTCATTA+TGG | - | chr7_1:14129912-14129931 | Msa1010820:intron | 30.0% | |
| ACTTAGGATTTCTCATTATG+GGG | - | chr7_1:14129914-14129933 | Msa1010820:intron | 30.0% | |
| TTGTGTCAGTAGCAATATAA+GGG | + | chr7_1:14129941-14129960 | None:intergenic | 30.0% | |
| TTTGTGTCAGTAGCAATATA+AGG | + | chr7_1:14129942-14129961 | None:intergenic | 30.0% | |
| ATTGCTACTGACACAAAATT+TGG | - | chr7_1:14129945-14129964 | Msa1010820:intron | 30.0% | |
| TTGCTACTGACACAAAATTT+GGG | - | chr7_1:14129946-14129965 | Msa1010820:intron | 30.0% | |
| ! | ACACAAAATTTGGGATTCAA+TGG | - | chr7_1:14129955-14129974 | Msa1010820:intron | 30.0% |
| GGCCAAAACAATATCTTAAA+TGG | - | chr7_1:14130178-14130197 | Msa1010820:CDS | 30.0% | |
| AATAAAATTCACATGCACCT+TGG | + | chr7_1:14130228-14130247 | None:intergenic | 30.0% | |
| TAATAAGAGAGTAAGCTTTC+TGG | - | chr7_1:14130250-14130269 | Msa1010820:CDS | 30.0% | |
| AACTTTCATCCAGATTAGAT+AGG | - | chr7_1:14130290-14130309 | Msa1010820:CDS | 30.0% | |
| GTAAACACAAGCACTTAATT+AGG | + | chr7_1:14130600-14130619 | None:intergenic | 30.0% | |
| !!! | GTTGGTTTTCATAAACTTGT+AGG | - | chr7_1:14130669-14130688 | Msa1010820:intron | 30.0% |
| ! | GTGCTGATAAAAAGACTTTA+AGG | - | chr7_1:14130880-14130899 | Msa1010820:intron | 30.0% |
| CTTCTACATTAGGAAAATAC+TGG | + | chr7_1:14130916-14130935 | None:intergenic | 30.0% | |
| !! | AGAAGTCATTTAGCTTTCAA+TGG | + | chr7_1:14130952-14130971 | None:intergenic | 30.0% |
| GTAACAACTAATGAATGACA+GGG | + | chr7_1:14131122-14131141 | None:intergenic | 30.0% | |
| AGTAACAACTAATGAATGAC+AGG | + | chr7_1:14131123-14131142 | None:intergenic | 30.0% | |
| AGTATGATAAATTTGCACAG+TGG | + | chr7_1:14131272-14131291 | None:intergenic | 30.0% | |
| !! | AAAAATTGCTTTTGTAGGGT+GGG | - | chr7_1:14131440-14131459 | Msa1010820:intron | 30.0% |
| GAGGAATTGAAAGATAAAAC+AGG | + | chr7_1:14131480-14131499 | None:intergenic | 30.0% | |
| GCATCTATGAATATATTAGG+AGG | + | chr7_1:14131499-14131518 | None:intergenic | 30.0% | |
| AAACCTGAAAATTTGATCCT+CGG | + | chr7_1:14131650-14131669 | None:intergenic | 30.0% | |
| CTTATACGATAAAGTGTGAA+TGG | + | chr7_1:14131717-14131736 | None:intergenic | 30.0% | |
| TAATTAGAGCATGTTTGGAT+TGG | + | chr7_1:14131945-14131964 | None:intergenic | 30.0% | |
| ACAGATAATTAGAGCATGTT+TGG | + | chr7_1:14131950-14131969 | None:intergenic | 30.0% | |
| !! | ATCTCATTTTTGAACCTTTG+TGG | - | chr7_1:14132080-14132099 | Msa1010820:intron | 30.0% |
| TGTAGGTACTTTGACAATTA+TGG | - | chr7_1:14132253-14132272 | Msa1010820:intron | 30.0% | |
| AGAGGACATTAGAAATGAAA+AGG | - | chr7_1:14132357-14132376 | Msa1010820:intron | 30.0% | |
| AGAAATGAAAAGGTCTCATA+TGG | - | chr7_1:14132367-14132386 | Msa1010820:intron | 30.0% | |
| !! | TTTTGCTTAAATTTAAGGCC+GGG | - | chr7_1:14132496-14132515 | Msa1010820:intron | 30.0% |
| !! | ACTTCTTTCTGAAATTGCTT+TGG | - | chr7_1:14132548-14132567 | Msa1010820:intron | 30.0% |
| !! | CTTCTTTCTGAAATTGCTTT+GGG | - | chr7_1:14132549-14132568 | Msa1010820:intron | 30.0% |
| CATGACTTTCAATTGCTTAA+TGG | - | chr7_1:14132658-14132677 | Msa1010820:CDS | 30.0% | |
| !! | TACAGTTTTGTCATCAATGT+AGG | + | chr7_1:14132785-14132804 | None:intergenic | 30.0% |
| TCTTGCATTATCTATGAAGA+GGG | + | chr7_1:14132845-14132864 | None:intergenic | 30.0% | |
| ATCTTGCATTATCTATGAAG+AGG | + | chr7_1:14132846-14132865 | None:intergenic | 30.0% | |
| TCTTCATAGATAATGCAAGA+TGG | - | chr7_1:14132845-14132864 | Msa1010820:intron | 30.0% | |
| CTTCATAGATAATGCAAGAT+GGG | - | chr7_1:14132846-14132865 | Msa1010820:intron | 30.0% | |
| !! | TACAAAGTGTTGTCAAATAG+CGG | + | chr7_1:14133027-14133046 | None:intergenic | 30.0% |
| ! | AATCTGTACAATCGGAATTT+TGG | - | chr7_1:14133245-14133264 | Msa1010820:intron | 30.0% |
| ATTTGTAGCATGATCAAGAT+CGG | + | chr7_1:14133273-14133292 | None:intergenic | 30.0% | |
| !! | ACTTGTTATAAAAGTTCAGC+CGG | - | chr7_1:14133295-14133314 | Msa1010820:intron | 30.0% |
| TAAATCTTCATTATGCAGCA+AGG | - | chr7_1:14133387-14133406 | Msa1010820:intron | 30.0% | |
| !! | TCTAACGGAATGTATTTTTG+GGG | + | chr7_1:14133451-14133470 | None:intergenic | 30.0% |
| ACCAGCTAAATAATCTAATG+CGG | + | chr7_1:14133767-14133786 | None:intergenic | 30.0% | |
| TGTTTATTTCAGATACTCGA+AGG | - | chr7_1:14133927-14133946 | Msa1010820:intron | 30.0% | |
| ATTTCTCTACATCTAATCCA+AGG | + | chr7_1:14134173-14134192 | None:intergenic | 30.0% | |
| ATGGCATAGTAATATTGGTA+TGG | - | chr7_1:14134295-14134314 | Msa1010820:five_prime_UTR | 30.0% | |
| CATAGTAATATTGGTATGGT+AGG | - | chr7_1:14134299-14134318 | Msa1010820:five_prime_UTR | 30.0% | |
| !!! | TTTTATTTTTGGTTTGGTGG+AGG | - | chr7_1:14134394-14134413 | Msa1010820:five_prime_UTR | 30.0% |
| !!! | TTTATTTTTGGTTTGGTGGA+GGG | - | chr7_1:14134395-14134414 | Msa1010820:five_prime_UTR | 30.0% |
| AAAAAACGAGGTTGAAGAAG+AGG | + | chr7_1:14127358-14127377 | None:intergenic | 35.0% | |
| ! | GATTGAGTAATGGAGGAAAA+GGG | + | chr7_1:14127440-14127459 | None:intergenic | 35.0% |
| ! | TGATTGAGTAATGGAGGAAA+AGG | + | chr7_1:14127441-14127460 | None:intergenic | 35.0% |
| TTAGAGGACAAAGAAGAAGA+TGG | + | chr7_1:14127523-14127542 | None:intergenic | 35.0% | |
| TAGAGAAAGTAACAGCAGAT+TGG | + | chr7_1:14127546-14127565 | None:intergenic | 35.0% | |
| AAACAGTAGCAGCAAGAAAA+CGG | + | chr7_1:14127570-14127589 | None:intergenic | 35.0% | |
| !! | TCAACACAATTTGTTGCAAC+AGG | - | chr7_1:14127600-14127619 | Msa1010820:three_prime_UTR | 35.0% |
| GTTCATACTCAACAACATGA+TGG | - | chr7_1:14127628-14127647 | Msa1010820:exon | 35.0% | |
| CCCATTTCAATGGTATAACA+TGG | + | chr7_1:14127798-14127817 | None:intergenic | 35.0% | |
| GTGAAGTTATGTTACACCTT+CGG | - | chr7_1:14127867-14127886 | Msa1010820:CDS | 35.0% | |
| TAATAGAGGAATAGTGCACT+AGG | - | chr7_1:14127971-14127990 | Msa1010820:intron | 35.0% | |
| GTCATCACATGTATCACTAT+CGG | + | chr7_1:14128029-14128048 | None:intergenic | 35.0% | |
| CCATGTGTGATATTTAAACG+CGG | - | chr7_1:14128250-14128269 | Msa1010820:intron | 35.0% | |
| ! | TTTGGATGAACAACTTTTGC+AGG | + | chr7_1:14128535-14128554 | None:intergenic | 35.0% |
| ATTGGGACAAATATCTACCT+AGG | + | chr7_1:14128563-14128582 | None:intergenic | 35.0% | |
| TGACACCATAGTGATATGAT+TGG | - | chr7_1:14128607-14128626 | Msa1010820:intron | 35.0% | |
| AGGTTTCTGAGCAAAAACTA+AGG | - | chr7_1:14128679-14128698 | Msa1010820:intron | 35.0% | |
| GCTATATATTCAATCGAACC+AGG | + | chr7_1:14128732-14128751 | None:intergenic | 35.0% | |
| !! | ACTATCTATTAAGTTGGGTC+TGG | + | chr7_1:14128790-14128809 | None:intergenic | 35.0% |
| CAATTATACACCGATAGTAG+AGG | + | chr7_1:14128832-14128851 | None:intergenic | 35.0% | |
| TCTTAGTCTCAGTATGACAA+TGG | - | chr7_1:14128981-14129000 | Msa1010820:CDS | 35.0% | |
| ! | GTTTTCAACAGGGGTTATAT+TGG | + | chr7_1:14129032-14129051 | None:intergenic | 35.0% |
| GTTGCAACCTGAATTATTGT+CGG | - | chr7_1:14129069-14129088 | Msa1010820:CDS | 35.0% | |
| TTCAACTTTAGATTCCATGG+AGG | + | chr7_1:14129101-14129120 | None:intergenic | 35.0% | |
| GTCTTCAACTTTAGATTCCA+TGG | + | chr7_1:14129104-14129123 | None:intergenic | 35.0% | |
| TGCTGGAAATATCTTCTTCT+TGG | + | chr7_1:14129194-14129213 | None:intergenic | 35.0% | |
| ! | TAGTAAAGTGCAAAAAGTGC+TGG | + | chr7_1:14129211-14129230 | None:intergenic | 35.0% |
| ATGTGTCAATATCCAACCTT+AGG | + | chr7_1:14129247-14129266 | None:intergenic | 35.0% | |
| TGATGCAGAACTGAGAAATA+TGG | - | chr7_1:14129390-14129409 | Msa1010820:intron | 35.0% | |
| ATTCCGCTATTTAACAACAC+TGG | + | chr7_1:14129507-14129526 | None:intergenic | 35.0% | |
| ! | AACTACGGTTTTCTGTAATC+CGG | - | chr7_1:14129620-14129639 | Msa1010820:intron | 35.0% |
| ! | AATCCGGGATTGATAACATT+TGG | - | chr7_1:14129636-14129655 | Msa1010820:intron | 35.0% |
| ! | ATCCGGGATTGATAACATTT+GGG | - | chr7_1:14129637-14129656 | Msa1010820:intron | 35.0% |
| !! | TAAAGAAAGCACTATCGTTC+AGG | + | chr7_1:14129679-14129698 | None:intergenic | 35.0% |
| ATCCTTCACAAAATTGGTCA+TGG | + | chr7_1:14129794-14129813 | None:intergenic | 35.0% | |
| ! | ATGACCAATTTTGTGAAGGA+TGG | - | chr7_1:14129793-14129812 | Msa1010820:CDS | 35.0% |
| !! | CATTGGTTTGCTTTGAACTT+AGG | - | chr7_1:14129898-14129917 | Msa1010820:intron | 35.0% |
| CTTAGGATTTCTCATTATGG+GGG | - | chr7_1:14129915-14129934 | Msa1010820:intron | 35.0% | |
| ! | AGTTTTCCGGAGAATCATAT+TGG | + | chr7_1:14130117-14130136 | None:intergenic | 35.0% |
| CTGAATGAACATGAGGTAAT+TGG | - | chr7_1:14130157-14130176 | Msa1010820:intron | 35.0% | |
| TATTACTCAATGTGGTTCCA+AGG | - | chr7_1:14130208-14130227 | Msa1010820:CDS | 35.0% | |
| ACAATACTCAAGGAACTTCA+TGG | + | chr7_1:14130544-14130563 | None:intergenic | 35.0% | |
| CAATAACAGCACAATACTCA+AGG | + | chr7_1:14130554-14130573 | None:intergenic | 35.0% | |
| AACTGACATGTGTCAAACAT+CGG | - | chr7_1:14130832-14130851 | Msa1010820:intron | 35.0% | |
| AGACTAGCAACAATACGTAA+CGG | + | chr7_1:14131093-14131112 | None:intergenic | 35.0% | |
| !!! | CGTATTGTTGCTAGTCTTTT+TGG | - | chr7_1:14131096-14131115 | Msa1010820:intron | 35.0% |
| !! | CAAAAATTGCTTTTGTAGGG+TGG | - | chr7_1:14131439-14131458 | Msa1010820:intron | 35.0% |
| ! | GTCATTGTTGAAAAGCCTTT+TGG | - | chr7_1:14131571-14131590 | Msa1010820:intron | 35.0% |
| AACTAAACTATGACCGTGTT+TGG | - | chr7_1:14131673-14131692 | Msa1010820:CDS | 35.0% | |
| GCGCTTAATATATCCAAACA+CGG | + | chr7_1:14131689-14131708 | None:intergenic | 35.0% | |
| AGATTGTTTGAAAGAGCTGA+TGG | + | chr7_1:14131886-14131905 | None:intergenic | 35.0% | |
| AATAAGTGTGAATGCTGCAA+AGG | + | chr7_1:14132186-14132205 | None:intergenic | 35.0% | |
| ! | ATTGTCAAAGTACCTACATG+TGG | + | chr7_1:14132251-14132270 | None:intergenic | 35.0% |
| AATACTAACCCTCTTTGCAA+TGG | - | chr7_1:14132312-14132331 | Msa1010820:intron | 35.0% | |
| ! | TGCTTATATTTAAGGTCGGA+GGG | + | chr7_1:14132439-14132458 | None:intergenic | 35.0% |
| ! | TTTGCTTAAATTTAAGGCCG+GGG | - | chr7_1:14132497-14132516 | Msa1010820:intron | 35.0% |
| ATATGCTAGAGTTTGAACTC+TGG | - | chr7_1:14132525-14132544 | Msa1010820:intron | 35.0% | |
| ! | TCAATTGCTTAATGGATGTC+AGG | - | chr7_1:14132666-14132685 | Msa1010820:CDS | 35.0% |
| ACTACATCCTCGAGTTTAAT+CGG | + | chr7_1:14132715-14132734 | None:intergenic | 35.0% | |
| ! | AAACTCGAGGATGTAGTTTT+AGG | - | chr7_1:14132718-14132737 | Msa1010820:exon | 35.0% |
| CTCTTGTGTGGTTCTTATAT+TGG | + | chr7_1:14132744-14132763 | None:intergenic | 35.0% | |
| CAATATAAGAACCACACAAG+AGG | - | chr7_1:14132742-14132761 | Msa1010820:five_prime_UTR | 35.0% | |
| TGATGACAAAACTGTACCAA+AGG | - | chr7_1:14132789-14132808 | Msa1010820:five_prime_UTR | 35.0% | |
| GATGACAAAACTGTACCAAA+GGG | - | chr7_1:14132790-14132809 | Msa1010820:five_prime_UTR | 35.0% | |
| ATAGATAATGCAAGATGGGA+TGG | - | chr7_1:14132850-14132869 | Msa1010820:intron | 35.0% | |
| TAGATAATGCAAGATGGGAT+GGG | - | chr7_1:14132851-14132870 | Msa1010820:intron | 35.0% | |
| !!! | TACCTTTTTTGATGAAGGCA+GGG | - | chr7_1:14132875-14132894 | Msa1010820:intron | 35.0% |
| TAGCAGCTTGTGAAAATTTG+CGG | - | chr7_1:14132955-14132974 | Msa1010820:intron | 35.0% | |
| TTCTCAACTAGCCGATATAT+CGG | + | chr7_1:14133114-14133133 | None:intergenic | 35.0% | |
| AACAACAAAATACCAGGGTT+AGG | - | chr7_1:14133341-14133360 | Msa1010820:intron | 35.0% | |
| TCCGCATTAGATTATTTAGC+TGG | - | chr7_1:14133763-14133782 | Msa1010820:intron | 35.0% | |
| ATTTCACTGCATTAATGGAG+TGG | + | chr7_1:14133881-14133900 | None:intergenic | 35.0% | |
| TTGCTTCTTGATGCAATTGA+AGG | - | chr7_1:14133973-14133992 | Msa1010820:intron | 35.0% | |
| TCTTCTATCTCATTCAACAC+GGG | + | chr7_1:14134057-14134076 | None:intergenic | 35.0% | |
| CTCTTCTATCTCATTCAACA+CGG | + | chr7_1:14134058-14134077 | None:intergenic | 35.0% | |
| TACCATAAGGATAGTACTCT+GGG | + | chr7_1:14134092-14134111 | None:intergenic | 35.0% | |
| ! | TCGATTTGTGGTTTCTTGTT+TGG | - | chr7_1:14134250-14134269 | Msa1010820:five_prime_UTR | 35.0% |
| !!! | CAGTTTTTTCAAGTCGAGTA+TGG | - | chr7_1:14134276-14134295 | Msa1010820:five_prime_UTR | 35.0% |
| CGAGTATGGCATAGTAATAT+TGG | - | chr7_1:14134290-14134309 | Msa1010820:five_prime_UTR | 35.0% | |
| GTTGAAGAAGAGGAAGAAGA+AGG | + | chr7_1:14127348-14127367 | None:intergenic | 40.0% | |
| GATGGAAACGAAGAAGAAGA+AGG | + | chr7_1:14127505-14127524 | None:intergenic | 40.0% | |
| ! | AGTAACAGCAGATTGGTTAG+AGG | + | chr7_1:14127539-14127558 | None:intergenic | 40.0% |
| ATCACATGTATCACTATCGG+TGG | + | chr7_1:14128026-14128045 | None:intergenic | 40.0% | |
| GAATTGATCACCTTAGCTAG+AGG | - | chr7_1:14128219-14128238 | Msa1010820:intron | 40.0% | |
| GGATTTATCTCCTCTAGCTA+AGG | + | chr7_1:14128232-14128251 | None:intergenic | 40.0% | |
| CCGCGTTTAAATATCACACA+TGG | + | chr7_1:14128253-14128272 | None:intergenic | 40.0% | |
| TATCTCAATAAGGGCCTGTT+CGG | - | chr7_1:14128284-14128303 | Msa1010820:intron | 40.0% | |
| ATATCTACCTAGGCTCTGTT+TGG | + | chr7_1:14128553-14128572 | None:intergenic | 40.0% | |
| GTCGTCCAATCATATCACTA+TGG | + | chr7_1:14128615-14128634 | None:intergenic | 40.0% | |
| GACACTTACACCTCTACTAT+CGG | - | chr7_1:14128819-14128838 | Msa1010820:intron | 40.0% | |
| TGACAATGGCATGTAAATGC+AGG | - | chr7_1:14128995-14129014 | Msa1010820:CDS | 40.0% | |
| !! | ACTATGGCTGTTTTCAACAG+GGG | + | chr7_1:14129041-14129060 | None:intergenic | 40.0% |
| !! | CACTATGGCTGTTTTCAACA+GGG | + | chr7_1:14129042-14129061 | None:intergenic | 40.0% |
| !!! | ATTGTCGGTTTTATCCTCCA+TGG | - | chr7_1:14129084-14129103 | Msa1010820:CDS | 40.0% |
| ! | AGTTGAAGACGGTGTTGAAA+AGG | - | chr7_1:14129114-14129133 | Msa1010820:CDS | 40.0% |
| ACTTCGAGCATAACCACAAA+TGG | + | chr7_1:14129362-14129381 | None:intergenic | 40.0% | |
| TGAAACGAAGGAGAACAAGT+TGG | + | chr7_1:14129462-14129481 | None:intergenic | 40.0% | |
| GCTCTATAAGACTGAAACGA+AGG | + | chr7_1:14129474-14129493 | None:intergenic | 40.0% | |
| ! | CTGCCAGTGTTGTTAAATAG+CGG | - | chr7_1:14129501-14129520 | Msa1010820:CDS | 40.0% |
| ! | ACTACGGTTTTCTGTAATCC+GGG | - | chr7_1:14129621-14129640 | Msa1010820:intron | 40.0% |
| ! | TCCGGGATTGATAACATTTG+GGG | - | chr7_1:14129638-14129657 | Msa1010820:intron | 40.0% |
| ACCCCAAATGTTATCAATCC+CGG | + | chr7_1:14129642-14129661 | None:intergenic | 40.0% | |
| TTGGGGTTATGGTTTGATTC+AGG | - | chr7_1:14129706-14129725 | Msa1010820:CDS | 40.0% | |
| AGGTTGTCAAATATTGGCCA+TGG | - | chr7_1:14129726-14129745 | Msa1010820:CDS | 40.0% | |
| TTGTCAAATATTGGCCATGG+CGG | - | chr7_1:14129729-14129748 | Msa1010820:CDS | 40.0% | |
| CTTCACAAAATTGGTCATGG+AGG | + | chr7_1:14129791-14129810 | None:intergenic | 40.0% | |
| ! | CTCCATGACCAATTTTGTGA+AGG | - | chr7_1:14129789-14129808 | Msa1010820:CDS | 40.0% |
| ! | ACCAATTTTGTGAAGGATGG+CGG | - | chr7_1:14129796-14129815 | Msa1010820:intron | 40.0% |
| GATATGGCAGTGCCATATTT+CGG | - | chr7_1:14129838-14129857 | Msa1010820:intron | 40.0% | |
| ! | CCATATTTCGGCTTGTATGT+CGG | - | chr7_1:14129850-14129869 | Msa1010820:intron | 40.0% |
| AAGCAAACCAATGTTGTCGA+TGG | + | chr7_1:14129891-14129910 | None:intergenic | 40.0% | |
| AGAGAACTGCAGTGAAAAGA+TGG | - | chr7_1:14130057-14130076 | Msa1010820:intron | 40.0% | |
| TTCTGGCCAATATGATTCTC+CGG | - | chr7_1:14130108-14130127 | Msa1010820:intron | 40.0% | |
| ! | TCTAGTGCTGCAAAGTTTTC+CGG | + | chr7_1:14130130-14130149 | None:intergenic | 40.0% |
| CAAGAAGCTGAATGAACATG+AGG | - | chr7_1:14130150-14130169 | Msa1010820:intron | 40.0% | |
| CTGCAAAGACCTATCTAATC+TGG | + | chr7_1:14130302-14130321 | None:intergenic | 40.0% | |
| TCAAGGAACTTCATGGTACA+AGG | + | chr7_1:14130537-14130556 | None:intergenic | 40.0% | |
| !! | CTACCAAAAAGCACCAGATA+AGG | - | chr7_1:14130781-14130800 | Msa1010820:intron | 40.0% |
| ! | GAACCTTATCTGGTGCTTTT+TGG | + | chr7_1:14130787-14130806 | None:intergenic | 40.0% |
| CACCAGATAAGGTTCTATGT+GGG | - | chr7_1:14130792-14130811 | Msa1010820:intron | 40.0% | |
| TACCCACATAGAACCTTATC+TGG | + | chr7_1:14130797-14130816 | None:intergenic | 40.0% | |
| ACTGACATGTGTCAAACATC+GGG | - | chr7_1:14130833-14130852 | Msa1010820:intron | 40.0% | |
| GATTCTGAATCACGACCAAA+AGG | + | chr7_1:14131589-14131608 | None:intergenic | 40.0% | |
| TGATCTTGTTAAAGCAGCTG+AGG | + | chr7_1:14131611-14131630 | None:intergenic | 40.0% | |
| ! | TGACCGAGGATCAAATTTTC+AGG | - | chr7_1:14131644-14131663 | Msa1010820:intron | 40.0% |
| TACAGGATCGATCACTATCT+TGG | - | chr7_1:14132016-14132035 | Msa1010820:intron | 40.0% | |
| CTATCTTGGAAAAGAGCTTG+TGG | - | chr7_1:14132030-14132049 | Msa1010820:intron | 40.0% | |
| ! | TTTTTGAACCTTTGTGGTCG+AGG | - | chr7_1:14132086-14132105 | Msa1010820:intron | 40.0% |
| !! | TCAGAAGATTTTGGTACCGA+AGG | - | chr7_1:14132139-14132158 | Msa1010820:intron | 40.0% |
| AATGGAAACCCCTGTTAGTT+TGG | - | chr7_1:14132330-14132349 | Msa1010820:intron | 40.0% | |
| ! | CTGCTTATATTTAAGGTCGG+AGG | + | chr7_1:14132440-14132459 | None:intergenic | 40.0% |
| ! | TTGCTTAAATTTAAGGCCGG+GGG | - | chr7_1:14132498-14132517 | Msa1010820:intron | 40.0% |
| ACTCTAGCATATAAATCCCC+CGG | + | chr7_1:14132517-14132536 | None:intergenic | 40.0% | |
| !! | CTTTCTGAAATTGCTTTGGG+TGG | - | chr7_1:14132552-14132571 | Msa1010820:intron | 40.0% |
| TCTATAACCATGAGTCTCTG+AGG | + | chr7_1:14132602-14132621 | None:intergenic | 40.0% | |
| TAATCGGTCTCATAGAACGA+AGG | + | chr7_1:14132699-14132718 | None:intergenic | 40.0% | |
| TATGAGACCGATTAAACTCG+AGG | - | chr7_1:14132705-14132724 | Msa1010820:CDS | 40.0% | |
| TATAAGAACCACACAAGAGG+AGG | - | chr7_1:14132745-14132764 | Msa1010820:five_prime_UTR | 40.0% | |
| ! | GTTTTGTCATCAATGTAGGC+TGG | + | chr7_1:14132781-14132800 | None:intergenic | 40.0% |
| AGATAATGCAAGATGGGATG+GGG | - | chr7_1:14132852-14132871 | Msa1010820:intron | 40.0% | |
| !!! | TGGGGTACCTTTTTTGATGA+AGG | - | chr7_1:14132870-14132889 | Msa1010820:intron | 40.0% |
| !!! | GTACCTTTTTTGATGAAGGC+AGG | - | chr7_1:14132874-14132893 | Msa1010820:intron | 40.0% |
| TTCCCTGCCTTCATCAAAAA+AGG | + | chr7_1:14132880-14132899 | None:intergenic | 40.0% | |
| TATTCCTCTCACTTACCTCT+TGG | + | chr7_1:14132914-14132933 | None:intergenic | 40.0% | |
| ATAAAAGTTCAGCCGGATGA+AGG | - | chr7_1:14133302-14133321 | Msa1010820:intron | 40.0% | |
| GAGAACATCTCATTATGGCT+TGG | - | chr7_1:14133477-14133496 | Msa1010820:intron | 40.0% | |
| AATGCGGAATGTTGAAGTTG+TGG | + | chr7_1:14133751-14133770 | None:intergenic | 40.0% | |
| AGATACCAGATGCTTATGAG+AGG | - | chr7_1:14133950-14133969 | Msa1010820:intron | 40.0% | |
| ACCATAAGGATAGTACTCTG+GGG | + | chr7_1:14134091-14134110 | None:intergenic | 40.0% | |
| CTACCATAAGGATAGTACTC+TGG | + | chr7_1:14134093-14134112 | None:intergenic | 40.0% | |
| TACTATCCTTATGGTAGTCG+TGG | - | chr7_1:14134096-14134115 | Msa1010820:intron | 40.0% | |
| CAGGCGCAACAAAATATGAA+CGG | + | chr7_1:14134198-14134217 | None:intergenic | 40.0% | |
| TGTGAGTTAGCTAACATCTG+AGG | + | chr7_1:14134228-14134247 | None:intergenic | 40.0% | |
| !! | CTAACTCACATGTCGATTTG+TGG | - | chr7_1:14134238-14134257 | Msa1010820:five_prime_UTR | 40.0% |
| AGACTCTTGAGATCTCCGAA+GGG | + | chr7_1:14127315-14127334 | None:intergenic | 45.0% | |
| AAGACTCTTGAGATCTCCGA+AGG | + | chr7_1:14127316-14127335 | None:intergenic | 45.0% | |
| GAGAGAGTTCGGAAAAAACG+AGG | + | chr7_1:14127370-14127389 | None:intergenic | 45.0% | |
| AGAGAGAGACAGAGAGAGTT+CGG | + | chr7_1:14127381-14127400 | None:intergenic | 45.0% | |
| ACCATTGAAATGGGGTGTAG+TGG | - | chr7_1:14127804-14127823 | Msa1010820:CDS | 45.0% | |
| CCATTGAAATGGGGTGTAGT+GGG | - | chr7_1:14127805-14127824 | Msa1010820:CDS | 45.0% | |
| CATTGAAATGGGGTGTAGTG+GGG | - | chr7_1:14127806-14127825 | Msa1010820:CDS | 45.0% | |
| AATAGTGCACTAGGCATGTC+AGG | - | chr7_1:14127980-14127999 | Msa1010820:intron | 45.0% | |
| TGTTCATCCAAACAGAGCCT+AGG | - | chr7_1:14128543-14128562 | Msa1010820:CDS | 45.0% | |
| !! | CCACTATGGCTGTTTTCAAC+AGG | + | chr7_1:14129043-14129062 | None:intergenic | 45.0% |
| CCTGTTGAAAACAGCCATAG+TGG | - | chr7_1:14129040-14129059 | Msa1010820:CDS | 45.0% | |
| AAAACAGCCATAGTGGCAAG+CGG | - | chr7_1:14129047-14129066 | Msa1010820:CDS | 45.0% | |
| ATAACTGTTGTTGGAGCCTC+TGG | - | chr7_1:14129160-14129179 | Msa1010820:intron | 45.0% | |
| TGGCAGCATTTCACCATTTG+TGG | - | chr7_1:14129346-14129365 | Msa1010820:intron | 45.0% | |
| ! | AGATATCGGTGACAGGCTTT+TGG | - | chr7_1:14129761-14129780 | Msa1010820:CDS | 45.0% |
| CCGACATACAAGCCGAAATA+TGG | + | chr7_1:14129853-14129872 | None:intergenic | 45.0% | |
| ! | CGGCTTGTATGTCGGATTTT+TGG | - | chr7_1:14129858-14129877 | Msa1010820:intron | 45.0% |
| CAAACCAATGTTGTCGATGG+CGG | + | chr7_1:14129888-14129907 | None:intergenic | 45.0% | |
| GTCAAATGAGCACAATCACG+TGG | + | chr7_1:14130338-14130357 | None:intergenic | 45.0% | |
| GCACCAGATAAGGTTCTATG+TGG | - | chr7_1:14130791-14130810 | Msa1010820:intron | 45.0% | |
| TGTGGGTAGCATACACATGT+TGG | - | chr7_1:14130809-14130828 | Msa1010820:intron | 45.0% | |
| TCAAGCTTGTCAGCATCTTC+TGG | - | chr7_1:14131529-14131548 | Msa1010820:intron | 45.0% | |
| CAAGCTTGTCAGCATCTTCT+GGG | - | chr7_1:14131530-14131549 | Msa1010820:intron | 45.0% | |
| ! | TTGTCAGCATCTTCTGGGAA+TGG | - | chr7_1:14131535-14131554 | Msa1010820:intron | 45.0% |
| ATGTATTGCCTCGACCACAA+AGG | + | chr7_1:14132097-14132116 | None:intergenic | 45.0% | |
| TGAATGCTGCAAAGGAAGAG+AGG | + | chr7_1:14132178-14132197 | None:intergenic | 45.0% | |
| AGGGGTTTCCATTGCAAAGA+GGG | + | chr7_1:14132323-14132342 | None:intergenic | 45.0% | |
| CTCTGCATCCAAACTAACAG+GGG | + | chr7_1:14132341-14132360 | None:intergenic | 45.0% | |
| CCTCTGCATCCAAACTAACA+GGG | + | chr7_1:14132342-14132361 | None:intergenic | 45.0% | |
| TCCTCTGCATCCAAACTAAC+AGG | + | chr7_1:14132343-14132362 | None:intergenic | 45.0% | |
| ! | GCTTAATGGATGTCAGGTCA+AGG | - | chr7_1:14132672-14132691 | Msa1010820:CDS | 45.0% |
| !! | GGAAAGCATTACACACCAAG+AGG | - | chr7_1:14132896-14132915 | Msa1010820:intron | 45.0% |
| CTACAGCATTGTACGCATAG+CGG | + | chr7_1:14132993-14133012 | None:intergenic | 45.0% | |
| AGTGCAGACTGCCGATATAT+CGG | - | chr7_1:14133100-14133119 | Msa1010820:intron | 45.0% | |
| ! | TATCGGCTAGTTGAGAACAC+TGG | - | chr7_1:14133117-14133136 | Msa1010820:intron | 45.0% |
| TTGGATTCAGAGCCGAGATA+CGG | - | chr7_1:14133198-14133217 | Msa1010820:intron | 45.0% | |
| TTCCGATTGTACAGATTGCC+CGG | + | chr7_1:14133242-14133261 | None:intergenic | 45.0% | |
| ACCAGGGTTAGGAATGAAGT+TGG | - | chr7_1:14133352-14133371 | Msa1010820:intron | 45.0% | |
| TCCAACTTCATTCCTAACCC+TGG | + | chr7_1:14133356-14133375 | None:intergenic | 45.0% | |
| AGCAACCTCTCATAAGCATC+TGG | + | chr7_1:14133958-14133977 | None:intergenic | 45.0% | |
| ! | ACCCCAGAGTACTATCCTTA+TGG | - | chr7_1:14134087-14134106 | Msa1010820:intron | 45.0% |
| GCAAGATAGTGAGCACAAAC+CGG | + | chr7_1:14134123-14134142 | None:intergenic | 45.0% | |
| GGTTTGTGCTCACTATCTTG+CGG | - | chr7_1:14134122-14134141 | Msa1010820:intron | 45.0% | |
| ! | TAACATCTGAGGCTGATCAC+AGG | + | chr7_1:14134217-14134236 | None:intergenic | 45.0% |
| !! | TTTGGTTTGGTGGAGGGAAT+TGG | - | chr7_1:14134401-14134420 | Msa1010820:five_prime_UTR | 45.0% |
| !! | TTGGTTTGGTGGAGGGAATT+GGG | - | chr7_1:14134402-14134421 | Msa1010820:five_prime_UTR | 45.0% |
| !! | ATATTATTTCATAAAATATT+GGG | + | chr7_1:14128580-14128599 | None:intergenic | 5.0% |
| !! | AATATTATTTCATAAAATAT+TGG | + | chr7_1:14128581-14128600 | None:intergenic | 5.0% |
| !!! | TTAAATATTTTAAAAAAAAG+GGG | + | chr7_1:14131387-14131406 | None:intergenic | 5.0% |
| !! | ATAAACATTAAAATATTATT+CGG | + | chr7_1:14133914-14133933 | None:intergenic | 5.0% |
| CCCACTACACCCCATTTCAA+TGG | + | chr7_1:14127808-14127827 | None:intergenic | 50.0% | |
| !! | CACTATCGGTGGTGTCATGT+TGG | + | chr7_1:14128015-14128034 | None:intergenic | 50.0% |
| TCTGTGTGTTGTGTCGTGTC+TGG | - | chr7_1:14128107-14128126 | Msa1010820:intron | 50.0% | |
| CTTCTTGGCAAGATCTCCAG+AGG | + | chr7_1:14129179-14129198 | None:intergenic | 50.0% | |
| CTATGAGGGTTGTCTGCCTA+AGG | - | chr7_1:14129228-14129247 | Msa1010820:intron | 50.0% | |
| GCCGCCATCCTTCACAAAAT+TGG | + | chr7_1:14129800-14129819 | None:intergenic | 50.0% | |
| ATCTCCGCCATCGACAACAT+TGG | - | chr7_1:14129881-14129900 | Msa1010820:intron | 50.0% | |
| AATGAGCACAATCACGTGGC+AGG | + | chr7_1:14130334-14130353 | None:intergenic | 50.0% | |
| AACATCGGGACACGCATAAC+CGG | - | chr7_1:14130847-14130866 | Msa1010820:intron | 50.0% | |
| TATCAGCACAGACACCTGAC+CGG | + | chr7_1:14130869-14130888 | None:intergenic | 50.0% | |
| ! | GCACAGTGGAGAGCATACAT+AGG | + | chr7_1:14131258-14131277 | None:intergenic | 50.0% |
| ! | TCAGCATCTTCTGGGAATGG+TGG | - | chr7_1:14131538-14131557 | Msa1010820:intron | 50.0% |
| ! | CATCTTCTGGGAATGGTGGT+TGG | - | chr7_1:14131542-14131561 | Msa1010820:intron | 50.0% |
| ACTCAAGCAGTATCTGACCG+AGG | - | chr7_1:14131630-14131649 | Msa1010820:intron | 50.0% | |
| !! | GATTTTGGTACCGAAGGACG+TGG | - | chr7_1:14132145-14132164 | Msa1010820:intron | 50.0% |
| CAGGGGTTTCCATTGCAAAG+AGG | + | chr7_1:14132324-14132343 | None:intergenic | 50.0% | |
| ! | CCCTGTTAGTTTGGATGCAG+AGG | - | chr7_1:14132339-14132358 | Msa1010820:intron | 50.0% |
| !! | TCTCTGAGGCATAGCTCAAG+TGG | + | chr7_1:14132588-14132607 | None:intergenic | 50.0% |
| AGCTATGCCTCAGAGACTCA+TGG | - | chr7_1:14132592-14132611 | Msa1010820:CDS | 50.0% | |
| ATGCAACACCTCCTCTTGTG+TGG | + | chr7_1:14132756-14132775 | None:intergenic | 50.0% | |
| CACACCAAGAGGTAAGTGAG+AGG | - | chr7_1:14132907-14132926 | Msa1010820:intron | 50.0% | |
| CAGTCTGCACTATATCGTGG+TGG | + | chr7_1:14133091-14133110 | None:intergenic | 50.0% | |
| TGGATTCAGAGCCGAGATAC+GGG | - | chr7_1:14133199-14133218 | Msa1010820:intron | 50.0% | |
| CCTGAACTGTACCCGTATCT+CGG | + | chr7_1:14133213-14133232 | None:intergenic | 50.0% | |
| ! | GGTACAGTTCAGGAAAGTGC+CGG | - | chr7_1:14133220-14133239 | Msa1010820:intron | 50.0% |
| !! | GTACAGTTCAGGAAAGTGCC+GGG | - | chr7_1:14133221-14133240 | Msa1010820:intron | 50.0% |
| TGCCGGGCAATCTGTACAAT+CGG | - | chr7_1:14133237-14133256 | Msa1010820:intron | 50.0% | |
| ATTCCCGCCACACATGATCA+TGG | - | chr7_1:14133800-14133819 | Msa1010820:intron | 50.0% | |
| GTGATGAACTCGATGCTGCT+TGG | - | chr7_1:14134019-14134038 | Msa1010820:intron | 50.0% | |
| TCCTTATGGTAGTCGTGGTC+CGG | - | chr7_1:14134101-14134120 | Msa1010820:intron | 50.0% | |
| GGCCAGATACAACGTACGAT+GGG | - | chr7_1:14134143-14134162 | Msa1010820:intron | 50.0% | |
| GCCAGATACAACGTACGATG+GGG | - | chr7_1:14134144-14134163 | Msa1010820:intron | 50.0% | |
| ACCCCATCGTACGTTGTATC+TGG | + | chr7_1:14134148-14134167 | None:intergenic | 50.0% | |
| !! | TGGTTTGGTGGAGGGAATTG+GGG | - | chr7_1:14134403-14134422 | Msa1010820:five_prime_UTR | 50.0% |
| ! | TGGGGTGTAGTGGGGTGATT+TGG | - | chr7_1:14127814-14127833 | Msa1010820:CDS | 55.0% |
| GTTGCAACCGCTTGCCACTA+TGG | + | chr7_1:14129057-14129076 | None:intergenic | 55.0% | |
| GAGGGTTGTCTGCCTAAGGT+TGG | - | chr7_1:14129232-14129251 | Msa1010820:intron | 55.0% | |
| CCTGTCACCGATATCTGCCA+TGG | + | chr7_1:14129757-14129776 | None:intergenic | 55.0% | |
| CCATGGCAGATATCGGTGAC+AGG | - | chr7_1:14129754-14129773 | Msa1010820:CDS | 55.0% | |
| ! | TGTGAAGGATGGCGGCATCT+TGG | - | chr7_1:14129804-14129823 | Msa1010820:intron | 55.0% |
| CTTGGCGCCATACTCGGATA+TGG | - | chr7_1:14129822-14129841 | Msa1010820:intron | 55.0% | |
| GGCACTGCCATATCCGAGTA+TGG | + | chr7_1:14129832-14129851 | None:intergenic | 55.0% | |
| ! | TTTGGTACCGAAGGACGTGG+CGG | - | chr7_1:14132148-14132167 | Msa1010820:intron | 55.0% |
| CTTAACCCCGACATTTGCCG+CGG | - | chr7_1:14132816-14132835 | Msa1010820:intron | 55.0% | |
| ATCTATGAAGAGGGCAGCCG+CGG | + | chr7_1:14132836-14132855 | None:intergenic | 55.0% | |
| CGGCAGTCTGCACTATATCG+TGG | + | chr7_1:14133094-14133113 | None:intergenic | 55.0% | |
| CCGAGATACGGGTACAGTTC+AGG | - | chr7_1:14133210-14133229 | Msa1010820:intron | 55.0% | |
| ! | GATCATGTGTGGCGGGAATG+AGG | + | chr7_1:14133799-14133818 | None:intergenic | 55.0% |
| CGACCATGATCATGTGTGGC+GGG | + | chr7_1:14133806-14133825 | None:intergenic | 55.0% | |
| GCGACCATGATCATGTGTGG+CGG | + | chr7_1:14133807-14133826 | None:intergenic | 55.0% | |
| TGCGCGACCATGATCATGTG+TGG | + | chr7_1:14133810-14133829 | None:intergenic | 55.0% | |
| ACCGGACCACGACTACCATA+AGG | + | chr7_1:14134105-14134124 | None:intergenic | 55.0% | |
| CGGCCAGATACAACGTACGA+TGG | - | chr7_1:14134142-14134161 | Msa1010820:intron | 55.0% | |
| AACGTACGATGGGGTGACCT+TGG | - | chr7_1:14134153-14134172 | Msa1010820:intron | 55.0% | |
| TTTGGTGGAGGGAATTGGGG+TGG | - | chr7_1:14134406-14134425 | Msa1010820:intron | 55.0% | |
| GGACAAGCCAAGCAGCCCTT+CGG | - | chr7_1:14127297-14127316 | Msa1010820:three_prime_UTR | 60.0% | |
| GAGATCTCCGAAGGGCTGCT+TGG | + | chr7_1:14127307-14127326 | None:intergenic | 60.0% | |
| ! | TATTGGCCATGGCGGTGCCA+TGG | - | chr7_1:14129737-14129756 | Msa1010820:CDS | 60.0% |
| TATCTGCCATGGCACCGCCA+TGG | + | chr7_1:14129746-14129765 | None:intergenic | 60.0% | |
| !! | GGCGGTGCCATGGCAGATAT+CGG | - | chr7_1:14129747-14129766 | Msa1010820:CDS | 60.0% |
| CGGCATCTTGGCGCCATACT+CGG | - | chr7_1:14129816-14129835 | Msa1010820:intron | 60.0% | |
| ! | TTGGTACCGAAGGACGTGGC+GGG | - | chr7_1:14132149-14132168 | Msa1010820:intron | 60.0% |
| AGGTTACCCGCCACGTCCTT+CGG | + | chr7_1:14132158-14132177 | None:intergenic | 60.0% | |
| GTCGGGGTTAAGCTGCCCTT+TGG | + | chr7_1:14132808-14132827 | None:intergenic | 60.0% | |
| CGGGACACGCATAACCGGTC+AGG | - | chr7_1:14130852-14130871 | Msa1010820:intron | 65.0% | |
| AGGGCAGCCGCGGCAAATGT+CGG | + | chr7_1:14132826-14132845 | None:intergenic | 65.0% | |
| GGCAGCCGCGGCAAATGTCG+GGG | + | chr7_1:14132824-14132843 | None:intergenic | 70.0% | |
| GGGCAGCCGCGGCAAATGTC+GGG | + | chr7_1:14132825-14132844 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 14127284 | 14134549 | 14127284 | ID=Msa1010820;Name=Msa1010820 |
| chr7_1 | mRNA | 14127284 | 14134549 | 14127284 | ID=Msa1010820-mRNA-1;Parent=Msa1010820;Name=Msa1010820-mRNA-1;_AED=0.16;_eAED=0.16;_QI=427|1|1|1|0.7|0.63|11|355|507 |
| chr7_1 | exon | 14127284 | 14127894 | 14127284 | ID=Msa1010820-mRNA-1:exon:3695;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14128425 | 14128625 | 14128425 | ID=Msa1010820-mRNA-1:exon:3694;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14128916 | 14129145 | 14128916 | ID=Msa1010820-mRNA-1:exon:3693;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14129455 | 14129575 | 14129455 | ID=Msa1010820-mRNA-1:exon:3692;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14129663 | 14129812 | 14129663 | ID=Msa1010820-mRNA-1:exon:3691;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14130168 | 14130376 | 14130168 | ID=Msa1010820-mRNA-1:exon:3690;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14131662 | 14131776 | 14131662 | ID=Msa1010820-mRNA-1:exon:3689;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14132387 | 14132481 | 14132387 | ID=Msa1010820-mRNA-1:exon:3688;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14132584 | 14132832 | 14132584 | ID=Msa1010820-mRNA-1:exon:3687;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14134205 | 14134422 | 14134205 | ID=Msa1010820-mRNA-1:exon:3686;Parent=Msa1010820-mRNA-1 |
| chr7_1 | exon | 14134443 | 14134549 | 14134443 | ID=Msa1010820-mRNA-1:exon:3685;Parent=Msa1010820-mRNA-1 |
| chr7_1 | five_prime_UTR | 14134443 | 14134549 | 14134443 | ID=Msa1010820-mRNA-1:five_prime_utr;Parent=Msa1010820-mRNA-1 |
| chr7_1 | five_prime_UTR | 14134205 | 14134422 | 14134205 | ID=Msa1010820-mRNA-1:five_prime_utr;Parent=Msa1010820-mRNA-1 |
| chr7_1 | five_prime_UTR | 14132731 | 14132832 | 14132731 | ID=Msa1010820-mRNA-1:five_prime_utr;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14132584 | 14132730 | 14132584 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14132387 | 14132481 | 14132387 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14131662 | 14131776 | 14131662 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14130168 | 14130376 | 14130168 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14129663 | 14129812 | 14129663 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14129455 | 14129575 | 14129455 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14128916 | 14129145 | 14128916 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14128425 | 14128625 | 14128425 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | CDS | 14127639 | 14127894 | 14127639 | ID=Msa1010820-mRNA-1:cds;Parent=Msa1010820-mRNA-1 |
| chr7_1 | three_prime_UTR | 14127284 | 14127638 | 14127284 | ID=Msa1010820-mRNA-1:three_prime_utr;Parent=Msa1010820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
