Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098810 | XP_039684246.1 | 91.632 | 239 | 12 | 1 | 1 | 239 | 1 | 231 | 9.53e-133 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098810 | sp|Q56XP9|ERFL1_ARATH | 67.708 | 96 | 30 | 1 | 108 | 202 | 109 | 204 | 2.49e-37 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098810 | A0A072U9S6 | 89.121 | 239 | 11 | 2 | 1 | 239 | 1 | 224 | 6.88e-126 | 365 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1098810 | TF | AP2/ERF-ERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1019400 | Msa1098810 | 0.970635 | 6.439360e-132 | -8.615850e-47 |
| Msa0875130 | Msa1098810 | 0.815004 | 1.154532e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098810 | MtrunA17_Chr7g0235291 | 89.121 | 239 | 11 | 2 | 1 | 239 | 1 | 224 | 1.32e-129 | 365 |
| Msa1098810 | MtrunA17_Chr8g0339471 | 62.917 | 240 | 88 | 1 | 1 | 239 | 1 | 240 | 2.42e-86 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098810 | AT4G13040.8 | 67.708 | 96 | 30 | 1 | 108 | 202 | 79 | 174 | 1.16e-38 | 133 |
| Msa1098810 | AT4G13040.4 | 67.708 | 96 | 30 | 1 | 108 | 202 | 79 | 174 | 1.16e-38 | 133 |
| Msa1098810 | AT4G13040.6 | 67.708 | 96 | 30 | 1 | 108 | 202 | 53 | 148 | 2.14e-38 | 132 |
| Msa1098810 | AT4G13040.2 | 67.708 | 96 | 30 | 1 | 108 | 202 | 53 | 148 | 2.14e-38 | 132 |
| Msa1098810 | AT4G13040.1 | 67.708 | 96 | 30 | 1 | 108 | 202 | 109 | 204 | 2.53e-38 | 133 |
| Msa1098810 | AT4G13040.3 | 67.708 | 96 | 30 | 1 | 108 | 202 | 129 | 224 | 5.75e-38 | 133 |
| Msa1098810 | AT4G13040.5 | 70.115 | 87 | 25 | 1 | 108 | 193 | 53 | 139 | 1.26e-37 | 129 |
| Msa1098810 | AT4G13040.7 | 70.115 | 87 | 25 | 1 | 108 | 193 | 109 | 195 | 3.48e-37 | 130 |
Find 72 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGTTCATCAAATATTTC+TGG | 0.203815 | 7_3:-26729752 | Msa1098810:CDS |
| GTTGGACATTGTCAACTTTC+AGG | 0.212580 | 7_3:-26728087 | Msa1098810:three_prime_UTR |
| TCTTCTGGAAGATCGAAATT+TGG | 0.215964 | 7_3:+26728652 | None:intergenic |
| AAAAGAAAGAAGGGGTTTAT+AGG | 0.268622 | 7_3:+26732865 | None:intergenic |
| ATTCAAATGGGATGATTTCT+TGG | 0.268781 | 7_3:-26728608 | Msa1098810:CDS |
| CTAGTTTGGTAGATTTATTA+AGG | 0.317759 | 7_3:+26728055 | None:intergenic |
| AAATAAATGTTGCACTAGTT+TGG | 0.338998 | 7_3:+26728041 | None:intergenic |
| ATCATCATGCTTTGGTGATT+CGG | 0.340271 | 7_3:-26731434 | Msa1098810:five_prime_UTR |
| AGTTCTTGCTTCTCTTCTTC+TGG | 0.355294 | 7_3:+26728637 | None:intergenic |
| AACAGGTAAACGAGATTACT+TGG | 0.363807 | 7_3:+26731490 | None:intergenic |
| CTTAAGAAGGCGCAGGCTCT+TGG | 0.364636 | 7_3:-26731383 | Msa1098810:CDS |
| AAGCTAAGGGTACCTGAAAA+AGG | 0.378612 | 7_3:+26732790 | None:intergenic |
| GATCTTATTCCTACACTGTC+TGG | 0.388027 | 7_3:+26731138 | None:intergenic |
| GAAAATTAATCATCATGCTT+TGG | 0.388375 | 7_3:-26731442 | Msa1098810:five_prime_UTR |
| TGGTTGAATAAGCAGCTCTT+TGG | 0.393760 | 7_3:+26729718 | None:intergenic |
| AAGCATAGGCCGTTCACTCT+TGG | 0.399260 | 7_3:+26731179 | None:intergenic |
| AGCATAGGCCGTTCACTCTT+GGG | 0.403215 | 7_3:+26731180 | None:intergenic |
| CTATACTGTGAGAATCTAAC+TGG | 0.406180 | 7_3:-26731231 | Msa1098810:CDS |
| ATCCCTTGCACAAAGATGAT+TGG | 0.416704 | 7_3:-26728328 | Msa1098810:CDS |
| TTAAGAAGGCGCAGGCTCTT+GGG | 0.424765 | 7_3:-26731382 | Msa1098810:CDS |
| AAAGATTATTAATGCTATCA+AGG | 0.426305 | 7_3:+26728164 | None:intergenic |
| AAGAACTGCGCAAATTCAAA+TGG | 0.429554 | 7_3:-26728621 | Msa1098810:CDS |
| GTGGTATTATTGAATATTGA+TGG | 0.430926 | 7_3:+26733102 | None:intergenic |
| AAGAAGGGTGGTGGAATGGA+AGG | 0.433672 | 7_3:+26733079 | None:intergenic |
| TCCCTTGCACAAAGATGATT+GGG | 0.444367 | 7_3:-26728327 | Msa1098810:CDS |
| AGTCAACAAGCCATTGTTGT+TGG | 0.447476 | 7_3:+26732764 | None:intergenic |
| AATCTTAAGGAAAAGAAAGA+AGG | 0.449854 | 7_3:+26732855 | None:intergenic |
| TTAGGGCTGCTTTCATGTGT+GGG | 0.459553 | 7_3:-26728681 | Msa1098810:intron |
| CTGGTTCTGAAAATTTGTCT+TGG | 0.459968 | 7_3:-26731212 | Msa1098810:CDS |
| TTCTCACAGTATAGAGGAAG+AGG | 0.469498 | 7_3:+26731240 | None:intergenic |
| GGGGTTTATAGGAATATTGA+AGG | 0.470955 | 7_3:+26732876 | None:intergenic |
| TTTAGGGCTGCTTTCATGTG+TGG | 0.474978 | 7_3:-26728682 | Msa1098810:intron |
| ATTGTTGTTGGTAAAAGCTA+AGG | 0.478012 | 7_3:+26732776 | None:intergenic |
| GTTAGATTCTCACAGTATAG+AGG | 0.486663 | 7_3:+26731234 | None:intergenic |
| CTGCTTATTCAACCAACCCT+TGG | 0.488352 | 7_3:-26729710 | Msa1098810:intron |
| ATCTAAGTGAGAAAATCTTA+AGG | 0.492378 | 7_3:+26732842 | None:intergenic |
| ATCTTAAGGAAAAGAAAGAA+GGG | 0.506714 | 7_3:+26732856 | None:intergenic |
| CCAGAAATATTTGATGAACC+TGG | 0.508695 | 7_3:+26729752 | None:intergenic |
| TTCCCAATCATCTTTGTGCA+AGG | 0.511091 | 7_3:+26728325 | None:intergenic |
| AGGCTCTTGGGACTATGCTC+AGG | 0.512795 | 7_3:-26731370 | Msa1098810:intron |
| TCCCAATCATCTTTGTGCAA+GGG | 0.517342 | 7_3:+26728326 | None:intergenic |
| TAACAATGGTAAGCTTAAGA+AGG | 0.536513 | 7_3:-26731396 | Msa1098810:exon |
| ATCTTATTCCTACACTGTCT+GGG | 0.537378 | 7_3:+26731139 | None:intergenic |
| TAGAGGAAGAGGAGAGACAA+AGG | 0.539634 | 7_3:+26731251 | None:intergenic |
| AGAACTGCGCAAATTCAAAT+GGG | 0.547529 | 7_3:-26728620 | Msa1098810:CDS |
| AGTCAAGAAGTCAGCATGAG+AGG | 0.556795 | 7_3:-26729116 | Msa1098810:CDS |
| AAGCTGCTCACTTATATGAC+AGG | 0.561672 | 7_3:-26729007 | Msa1098810:intron |
| AGGGTGGTGGAATGGAAGGG+TGG | 0.566580 | 7_3:+26733083 | None:intergenic |
| AGAAGGGTGGTGGAATGGAA+GGG | 0.567468 | 7_3:+26733080 | None:intergenic |
| TCAAACGTAGGAAGCGACAT+AGG | 0.588875 | 7_3:-26729154 | Msa1098810:CDS |
| GATGATTGGGAAAGTATGCA+AGG | 0.596433 | 7_3:-26728314 | Msa1098810:CDS |
| TGGTAAGCTTAAGAAGGCGC+AGG | 0.598870 | 7_3:-26731390 | Msa1098810:CDS |
| ATAACACACAATACAAGAGG+AGG | 0.601063 | 7_3:-26733019 | Msa1098810:five_prime_UTR |
| ATGCTAAACCCAAGAGTGAA+CGG | 0.601380 | 7_3:-26731188 | Msa1098810:CDS |
| ACTGTTGTGCAAGAAGAACC+AGG | 0.605854 | 7_3:-26729770 | Msa1098810:CDS |
| AGGAATATTGAAGGAAGACA+AGG | 0.607502 | 7_3:+26732885 | None:intergenic |
| ATGAGATAATGTGTGTGTTG+TGG | 0.607518 | 7_3:+26732924 | None:intergenic |
| TTGTTGTTGGTAAAAGCTAA+GGG | 0.607961 | 7_3:+26732777 | None:intergenic |
| CTTGCGATCCAACAGTACCT+AGG | 0.608114 | 7_3:+26729033 | None:intergenic |
| AAAGAGTGTACATCTCAAGT+TGG | 0.610547 | 7_3:-26728105 | Msa1098810:three_prime_UTR |
| CTTGCATCATCTGAAAGCAT+AGG | 0.615914 | 7_3:+26731165 | None:intergenic |
| TCTTAAGGAAAAGAAAGAAG+GGG | 0.619203 | 7_3:+26732857 | None:intergenic |
| GAAAGTATGCAAGGAGTGAG+TGG | 0.620825 | 7_3:-26728305 | Msa1098810:CDS |
| TTAATAACACACAATACAAG+AGG | 0.621501 | 7_3:-26733022 | Msa1098810:five_prime_UTR |
| AATATTGAAGGAAGACAAGG+TGG | 0.633313 | 7_3:+26732888 | None:intergenic |
| GTAAACAACTAACCAAGGGT+TGG | 0.634157 | 7_3:+26729698 | None:intergenic |
| GCAAGCATCCCAGACAGTGT+AGG | 0.639402 | 7_3:-26731147 | Msa1098810:CDS |
| TAACACACAATACAAGAGGA+GGG | 0.656690 | 7_3:-26733018 | Msa1098810:five_prime_UTR |
| TAATTAATGGATCTAGCATG+AGG | 0.667121 | 7_3:+26728216 | None:intergenic |
| TTAATGGATCTAGCATGAGG+TGG | 0.688743 | 7_3:+26728219 | None:intergenic |
| CAGGACCTGCTGTCAAACGT+AGG | 0.692659 | 7_3:-26729166 | Msa1098810:CDS |
| GACAAGAAACAGATTCACCT+AGG | 0.711667 | 7_3:-26729050 | Msa1098810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATCTTTTTTTCAT+TGG | - | chr7_3:26730155-26730174 | Msa1098810:intron | 10.0% |
| !! | TAAATCAAAAACTATTTATT+TGG | + | chr7_3:26731537-26731556 | None:intergenic | 10.0% |
| !!! | AAATAAATAGTTTTTGATTT+AGG | - | chr7_3:26731536-26731555 | Msa1098810:intron | 10.0% |
| !! | TATCTAATTATAATATAAAG+TGG | + | chr7_3:26731752-26731771 | None:intergenic | 10.0% |
| !!! | ATTTTCTACAATATAATTAA+TGG | + | chr7_3:26732950-26732969 | None:intergenic | 10.0% |
| !!! | TTAAACTTTTCATATTTCAT+AGG | - | chr7_3:26731823-26731842 | Msa1098810:intron | 15.0% |
| !! | GAAGAAAATAAGAAAAAGAA+GGG | + | chr7_3:26728089-26728108 | None:intergenic | 20.0% |
| !! | AGAAGAAAATAAGAAAAAGA+AGG | + | chr7_3:26728090-26728109 | None:intergenic | 20.0% |
| !! | AAAACAAAAACAGAAACAAA+AGG | - | chr7_3:26728188-26728207 | Msa1098810:three_prime_UTR | 20.0% |
| !!! | AAATCTTTTGAGAAAAAAGA+TGG | + | chr7_3:26728835-26728854 | None:intergenic | 20.0% |
| !!! | ATAAAACTAATTTGCAAAGA+AGG | + | chr7_3:26728864-26728883 | None:intergenic | 20.0% |
| !!! | TATCATGTTTCAGTTTTAAA+AGG | - | chr7_3:26728881-26728900 | Msa1098810:intron | 20.0% |
| !!! | ATCATGTTTCAGTTTTAAAA+GGG | - | chr7_3:26728882-26728901 | Msa1098810:intron | 20.0% |
| !! | GATTTGAATTATGTTTACAA+AGG | - | chr7_3:26728944-26728963 | Msa1098810:intron | 20.0% |
| !!! | AATGGTTTTTTCCTAATTAT+AGG | + | chr7_3:26729196-26729215 | None:intergenic | 20.0% |
| !! | AAAGGCAAAAAAAAAATGAT+TGG | + | chr7_3:26729866-26729885 | None:intergenic | 20.0% |
| !! | CTTTAAACAGATTTATCAAT+AGG | + | chr7_3:26730099-26730118 | None:intergenic | 20.0% |
| !!! | ATTGAACATTTTGAAATGAA+TGG | + | chr7_3:26730538-26730557 | None:intergenic | 20.0% |
| !!! | AGATGAAAAATATTTTGAAG+AGG | - | chr7_3:26730829-26730848 | Msa1098810:intron | 20.0% |
| !!! | CTGATAAAATATAGCTTTTT+TGG | + | chr7_3:26731063-26731082 | None:intergenic | 20.0% |
| !!! | TCATTCTAGTTTTTAAAAGA+CGG | + | chr7_3:26731086-26731105 | None:intergenic | 20.0% |
| !! | AATCAGAATAAATGTTTACA+AGG | - | chr7_3:26731251-26731270 | Msa1098810:CDS | 20.0% |
| !! | GAAAAAACATTCATACATTA+GGG | + | chr7_3:26731712-26731731 | None:intergenic | 20.0% |
| !!! | CTTATTTAAGTATGTTTTAC+TGG | - | chr7_3:26731861-26731880 | Msa1098810:intron | 20.0% |
| !! | GCTAACAAAATAAAATATCT+TGG | - | chr7_3:26732383-26732402 | Msa1098810:intron | 20.0% |
| !!! | AAAAACATCTCTTTTTCTTT+AGG | - | chr7_3:26732451-26732470 | Msa1098810:intron | 20.0% |
| !!! | AAAACATCTCTTTTTCTTTA+GGG | - | chr7_3:26732452-26732471 | Msa1098810:intron | 20.0% |
| !! | TATAATTGAATACATGTGTA+TGG | - | chr7_3:26732684-26732703 | Msa1098810:intron | 20.0% |
| !! | AAAGATTATTAATGCTATCA+AGG | + | chr7_3:26732989-26733008 | None:intergenic | 20.0% |
| ! | GTGGTATTATTGAATATTGA+TGG | + | chr7_3:26728051-26728070 | None:intergenic | 25.0% |
| ! | TTAATAACACACAATACAAG+AGG | - | chr7_3:26728128-26728147 | Msa1098810:three_prime_UTR | 25.0% |
| ! | ATCTTAAGGAAAAGAAAGAA+GGG | + | chr7_3:26728297-26728316 | None:intergenic | 25.0% |
| ! | AATCTTAAGGAAAAGAAAGA+AGG | + | chr7_3:26728298-26728317 | None:intergenic | 25.0% |
| ! | ATCTAAGTGAGAAAATCTTA+AGG | + | chr7_3:26728311-26728330 | None:intergenic | 25.0% |
| ! | AAAAGACACAAAAAAACGTA+CGG | + | chr7_3:26728426-26728445 | None:intergenic | 25.0% |
| ! | AAGGAAACTAAATGAAAGAA+AGG | + | chr7_3:26728458-26728477 | None:intergenic | 25.0% |
| ! | TTTCTATAGTTTCCTTGAAT+GGG | - | chr7_3:26728594-26728613 | Msa1098810:CDS | 25.0% |
| !!! | GCTTTTTGCTATGATAAAAT+TGG | - | chr7_3:26728915-26728934 | Msa1098810:intron | 25.0% |
| !! | GTTTACAAAGGTTTATTTCT+AGG | - | chr7_3:26728956-26728975 | Msa1098810:intron | 25.0% |
| ! | TTTGTATCTGTACTTGTTTA+TGG | - | chr7_3:26729021-26729040 | Msa1098810:CDS | 25.0% |
| ! | AGTTATACTACAAAAAGCAA+TGG | + | chr7_3:26729214-26729233 | None:intergenic | 25.0% |
| ! | AAAGGCAAAATGTATCTTTA+GGG | + | chr7_3:26729255-26729274 | None:intergenic | 25.0% |
| ! | TAAAGGCAAAATGTATCTTT+AGG | + | chr7_3:26729256-26729275 | None:intergenic | 25.0% |
| !! | TATTTTCGCAAGTTATCTTT+GGG | - | chr7_3:26729400-26729419 | Msa1098810:intron | 25.0% |
| ! | AATAAGTCGAAAACAGTTTA+TGG | - | chr7_3:26729432-26729451 | Msa1098810:intron | 25.0% |
| ! | AGCATATTTACAGCTTATTT+GGG | + | chr7_3:26729534-26729553 | None:intergenic | 25.0% |
| !!! | CCTGTTTTAAAGGAAAAAAA+CGG | - | chr7_3:26729677-26729696 | Msa1098810:intron | 25.0% |
| ! | GAAAATTAATCATCATGCTT+TGG | - | chr7_3:26729708-26729727 | Msa1098810:intron | 25.0% |
| ! | AAAAAGACTGAAACTAACAA+TGG | - | chr7_3:26729740-26729759 | Msa1098810:CDS | 25.0% |
| !! | AATGTCTTAGAATTTAGGTT+AGG | + | chr7_3:26730463-26730482 | None:intergenic | 25.0% |
| !!! | TCTTCTTTTCTCTAAGATTT+TGG | - | chr7_3:26730712-26730731 | Msa1098810:intron | 25.0% |
| !!! | TAAGATTTTGGCTAGTTATT+TGG | - | chr7_3:26730724-26730743 | Msa1098810:intron | 25.0% |
| !! | TTGAAGAGGAAGTTTAAAAT+TGG | - | chr7_3:26730843-26730862 | Msa1098810:intron | 25.0% |
| !!! | TTTTTGATTTAGGATCTGTT+TGG | - | chr7_3:26731546-26731565 | Msa1098810:intron | 25.0% |
| !! | TTAGATTGATTCACTAAAGA+GGG | - | chr7_3:26731623-26731642 | Msa1098810:intron | 25.0% |
| ! | GGAAAAAACATTCATACATT+AGG | + | chr7_3:26731713-26731732 | None:intergenic | 25.0% |
| ! | CATACTTAAATAAGCTTAGT+TGG | + | chr7_3:26731855-26731874 | None:intergenic | 25.0% |
| ! | AAAGCTAATAGAGAATTTGA+TGG | + | chr7_3:26731917-26731936 | None:intergenic | 25.0% |
| ! | TGTACTTCAAAAATATGAAG+TGG | - | chr7_3:26732059-26732078 | Msa1098810:intron | 25.0% |
| ! | TAACAACATTATAGAACTCA+AGG | + | chr7_3:26732174-26732193 | None:intergenic | 25.0% |
| !! | TTTTCATACTAAGTAGATCA+TGG | + | chr7_3:26732435-26732454 | None:intergenic | 25.0% |
| ! | TAAAACAAGTAATATCTAGC+AGG | + | chr7_3:26732720-26732739 | None:intergenic | 25.0% |
| ! | CTAGTTTGGTAGATTTATTA+AGG | + | chr7_3:26733098-26733117 | None:intergenic | 25.0% |
| ! | AAATAAATGTTGCACTAGTT+TGG | + | chr7_3:26733112-26733131 | None:intergenic | 25.0% |
| !!! | ATTTATTTTCTTCTGTGCAA+TGG | - | chr7_3:26733124-26733143 | Msa1098810:five_prime_UTR | 25.0% |
| GAAAATAAGAAAAAGAAGGG+TGG | + | chr7_3:26728086-26728105 | None:intergenic | 30.0% | |
| ACAAAAACAGAAACAAAAGG+TGG | - | chr7_3:26728191-26728210 | Msa1098810:three_prime_UTR | 30.0% | |
| AAAAGAAAGAAGGGGTTTAT+AGG | + | chr7_3:26728288-26728307 | None:intergenic | 30.0% | |
| TCTTAAGGAAAAGAAAGAAG+GGG | + | chr7_3:26728296-26728315 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGGTAAAAGCTAA+GGG | + | chr7_3:26728376-26728395 | None:intergenic | 30.0% |
| ! | ATTGTTGTTGGTAAAAGCTA+AGG | + | chr7_3:26728377-26728396 | None:intergenic | 30.0% |
| !! | TTAGCTTTTACCAACAACAA+TGG | - | chr7_3:26728376-26728395 | Msa1098810:CDS | 30.0% |
| ACAAAAAAACGTACGGAAAT+GGG | + | chr7_3:26728419-26728438 | None:intergenic | 30.0% | |
| GACACGACAACATATAAAAA+AGG | + | chr7_3:26728477-26728496 | None:intergenic | 30.0% | |
| CTTTCTATAGTTTCCTTGAA+TGG | - | chr7_3:26728593-26728612 | Msa1098810:CDS | 30.0% | |
| ATTCAAAAAACACCCATTCA+AGG | + | chr7_3:26728609-26728628 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTTGTGATTTGTG+TGG | - | chr7_3:26728651-26728670 | Msa1098810:CDS | 30.0% |
| AACCAAAAGGAGAAATACTT+TGG | - | chr7_3:26728743-26728762 | Msa1098810:intron | 30.0% | |
| !! | AACCAAAGTATTTCTCCTTT+TGG | + | chr7_3:26728748-26728767 | None:intergenic | 30.0% |
| TTGCTCAATGAAACATTGAA+TGG | + | chr7_3:26728803-26728822 | None:intergenic | 30.0% | |
| AATGTTTCATTGAGCAAACT+AGG | - | chr7_3:26728806-26728825 | Msa1098810:intron | 30.0% | |
| AACAAGTACAGATACAAATG+CGG | + | chr7_3:26729019-26729038 | None:intergenic | 30.0% | |
| !! | TTTATGGATGATTTTGACCA+AGG | - | chr7_3:26729037-26729056 | Msa1098810:CDS | 30.0% |
| ! | GATGATTTTCTACCTATTTC+TGG | - | chr7_3:26729169-26729188 | Msa1098810:intron | 30.0% |
| CTAATTATAGGACCAGAAAT+AGG | + | chr7_3:26729184-26729203 | None:intergenic | 30.0% | |
| !! | CTATTTCTGGTCCTATAATT+AGG | - | chr7_3:26729182-26729201 | Msa1098810:intron | 30.0% |
| ! | CATTTTGCCTTTACTAATTG+TGG | - | chr7_3:26729263-26729282 | Msa1098810:intron | 30.0% |
| AAACACACCACAATTAGTAA+AGG | + | chr7_3:26729273-26729292 | None:intergenic | 30.0% | |
| TTTACTAATTGTGGTGTGTT+TGG | - | chr7_3:26729272-26729291 | Msa1098810:intron | 30.0% | |
| ! | CTATTTTCGCAAGTTATCTT+TGG | - | chr7_3:26729399-26729418 | Msa1098810:intron | 30.0% |
| GAGCATATTTACAGCTTATT+TGG | + | chr7_3:26729535-26729554 | None:intergenic | 30.0% | |
| ! | GGTTGCATATTGTTTTCTTT+TGG | - | chr7_3:26729571-26729590 | Msa1098810:intron | 30.0% |
| TTGGAATTTACAGCATTGTT+TGG | - | chr7_3:26729590-26729609 | Msa1098810:intron | 30.0% | |
| !! | ATCTCGTTTACCTGTTTTAA+AGG | - | chr7_3:26729667-26729686 | Msa1098810:intron | 30.0% |
| !!! | CCGTTTTTTTCCTTTAAAAC+AGG | + | chr7_3:26729680-26729699 | None:intergenic | 30.0% |
| TTAAAGGAAAAAAACGGCTA+TGG | - | chr7_3:26729683-26729702 | Msa1098810:intron | 30.0% | |
| TAACAATGGTAAGCTTAAGA+AGG | - | chr7_3:26729754-26729773 | Msa1098810:CDS | 30.0% | |
| ! | GATACAAAAGCATGATGAAT+AGG | + | chr7_3:26729820-26729839 | None:intergenic | 30.0% |
| !!! | CATTTTTTTTTTGCCTTTGC+AGG | - | chr7_3:26729868-26729887 | Msa1098810:intron | 30.0% |
| AATAAAAGTCCTCGTTGAAA+TGG | + | chr7_3:26730140-26730159 | None:intergenic | 30.0% | |
| ! | CTGAAAAATGAGTTTAGAAC+CGG | - | chr7_3:26730214-26730233 | Msa1098810:intron | 30.0% |
| ! | TGAAAAATGAGTTTAGAACC+GGG | - | chr7_3:26730215-26730234 | Msa1098810:intron | 30.0% |
| GAAGCAATGTCTTAGAATTT+AGG | + | chr7_3:26730468-26730487 | None:intergenic | 30.0% | |
| TCTGATTCAATTGAAAGATC+AGG | - | chr7_3:26730486-26730505 | Msa1098810:intron | 30.0% | |
| AAAGAAGAATTATCCAACCA+TGG | + | chr7_3:26730700-26730719 | None:intergenic | 30.0% | |
| TGATACTCAGTAATCATCAT+TGG | - | chr7_3:26730757-26730776 | Msa1098810:intron | 30.0% | |
| TTCGGCATTCTAATAGTAAA+AGG | - | chr7_3:26730804-26730823 | Msa1098810:intron | 30.0% | |
| TCAATGCATTATCTTTCATC+CGG | - | chr7_3:26730902-26730921 | Msa1098810:intron | 30.0% | |
| ! | CATGGTTCAATTGGTTTAAT+CGG | + | chr7_3:26730944-26730963 | None:intergenic | 30.0% |
| CATAGTAAACAACTAACCAA+GGG | + | chr7_3:26731459-26731478 | None:intergenic | 30.0% | |
| ACATAGTAAACAACTAACCA+AGG | + | chr7_3:26731460-26731479 | None:intergenic | 30.0% | |
| ! | TGTTTGGAACAATTAGTGAT+TGG | - | chr7_3:26731562-26731581 | Msa1098810:intron | 30.0% |
| ! | GTTAGATTGATTCACTAAAG+AGG | - | chr7_3:26731622-26731641 | Msa1098810:intron | 30.0% |
| ! | TAGATTGATTCACTAAAGAG+GGG | - | chr7_3:26731624-26731643 | Msa1098810:intron | 30.0% |
| TAGATATCTTGAAACTGTTG+CGG | - | chr7_3:26731766-26731785 | Msa1098810:intron | 30.0% | |
| CTTAACTTCGTTGATATCAT+TGG | - | chr7_3:26731791-26731810 | Msa1098810:intron | 30.0% | |
| TGCTAAATGCAATGTAAAGT+AGG | + | chr7_3:26731966-26731985 | None:intergenic | 30.0% | |
| TACTTTACATTGCATTTAGC+AGG | - | chr7_3:26731965-26731984 | Msa1098810:intron | 30.0% | |
| TGTACTAAGATGAAGGTTTA+GGG | - | chr7_3:26732310-26732329 | Msa1098810:intron | 30.0% | |
| ATTCAAATGGGATGATTTCT+TGG | - | chr7_3:26732542-26732561 | Msa1098810:intron | 30.0% | |
| !! | CAAGATTATTTTGCAGTTCT+GGG | + | chr7_3:26732796-26732815 | None:intergenic | 30.0% |
| !! | TCAAGATTATTTTGCAGTTC+TGG | + | chr7_3:26732797-26732816 | None:intergenic | 30.0% |
| ! | TAATTAATGGATCTAGCATG+AGG | + | chr7_3:26732937-26732956 | None:intergenic | 30.0% |
| AATAAGAAAAAGAAGGGTGG+TGG | + | chr7_3:26728083-26728102 | None:intergenic | 35.0% | |
| ATAACACACAATACAAGAGG+AGG | - | chr7_3:26728131-26728150 | Msa1098810:three_prime_UTR | 35.0% | |
| TAACACACAATACAAGAGGA+GGG | - | chr7_3:26728132-26728151 | Msa1098810:three_prime_UTR | 35.0% | |
| ATGAGATAATGTGTGTGTTG+TGG | + | chr7_3:26728229-26728248 | None:intergenic | 35.0% | |
| AATATTGAAGGAAGACAAGG+TGG | + | chr7_3:26728265-26728284 | None:intergenic | 35.0% | |
| AGGAATATTGAAGGAAGACA+AGG | + | chr7_3:26728268-26728287 | None:intergenic | 35.0% | |
| GGGGTTTATAGGAATATTGA+AGG | + | chr7_3:26728277-26728296 | None:intergenic | 35.0% | |
| ! | TTGTCACCTTATCCTTTTTC+AGG | - | chr7_3:26728348-26728367 | Msa1098810:CDS | 35.0% |
| CACAAAAAAACGTACGGAAA+TGG | + | chr7_3:26728420-26728439 | None:intergenic | 35.0% | |
| GTTGACTGATGATAAAGTCT+TGG | - | chr7_3:26728569-26728588 | Msa1098810:intron | 35.0% | |
| ! | GTGAATGTGTGTGTGTATTT+TGG | - | chr7_3:26728635-26728654 | Msa1098810:CDS | 35.0% |
| ! | TGTGATTTGTGTGGTCAAAA+TGG | - | chr7_3:26728660-26728679 | Msa1098810:CDS | 35.0% |
| ! | GTGATTTGTGTGGTCAAAAT+GGG | - | chr7_3:26728661-26728680 | Msa1098810:CDS | 35.0% |
| ! | TTACTACCCTTTTCCAAGAA+AGG | - | chr7_3:26728697-26728716 | Msa1098810:intron | 35.0% |
| ! | ATGGAGTTGACTTAACCAAA+AGG | - | chr7_3:26728730-26728749 | Msa1098810:intron | 35.0% |
| TTGATGCTTAAAAACCACCT+TGG | + | chr7_3:26729057-26729076 | None:intergenic | 35.0% | |
| TTTAAGCATCAAGTCAAAGC+AGG | - | chr7_3:26729065-26729084 | Msa1098810:CDS | 35.0% | |
| AGTTGAACTACATTCTCTCT+TGG | + | chr7_3:26729358-26729377 | None:intergenic | 35.0% | |
| GCTTATTTGGGCTTATCTTA+TGG | + | chr7_3:26729522-26729541 | None:intergenic | 35.0% | |
| !! | GAAACTTTTTCTTCCCCTAT+AGG | - | chr7_3:26729636-26729655 | Msa1098810:intron | 35.0% |
| AACAGGTAAACGAGATTACT+TGG | + | chr7_3:26729663-26729682 | None:intergenic | 35.0% | |
| ! | ATCATCATGCTTTGGTGATT+CGG | - | chr7_3:26729716-26729735 | Msa1098810:CDS | 35.0% |
| GTTAGATTCTCACAGTATAG+AGG | + | chr7_3:26729919-26729938 | None:intergenic | 35.0% | |
| CTATACTGTGAGAATCTAAC+TGG | - | chr7_3:26729919-26729938 | Msa1098810:intron | 35.0% | |
| !! | CTGGTTCTGAAAATTTGTCT+TGG | - | chr7_3:26729938-26729957 | Msa1098810:intron | 35.0% |
| ATCTTATTCCTACACTGTCT+GGG | + | chr7_3:26730014-26730033 | None:intergenic | 35.0% | |
| ! | GTCTCACATTTGATGACATA+TGG | - | chr7_3:26730190-26730209 | Msa1098810:intron | 35.0% |
| CCTTACAAAACCAACTTGAA+AGG | + | chr7_3:26730253-26730272 | None:intergenic | 35.0% | |
| !!! | CCTTTCAAGTTGGTTTTGTA+AGG | - | chr7_3:26730250-26730269 | Msa1098810:intron | 35.0% |
| ! | TATCTAAAGCGTAACTTGAG+TGG | + | chr7_3:26730318-26730337 | None:intergenic | 35.0% |
| GATCATATCTCATCAAGTGA+GGG | + | chr7_3:26730373-26730392 | None:intergenic | 35.0% | |
| AGATCATATCTCATCAAGTG+AGG | + | chr7_3:26730374-26730393 | None:intergenic | 35.0% | |
| CTGAAAACGAGTTTGTAAGT+TGG | - | chr7_3:26730392-26730411 | Msa1098810:intron | 35.0% | |
| CTAACTCAACCCTACAAAAT+CGG | + | chr7_3:26730439-26730458 | None:intergenic | 35.0% | |
| ! | TTTTGCTTGTCTTCTTCAAC+TGG | - | chr7_3:26730878-26730897 | Msa1098810:intron | 35.0% |
| TAAACCAATTGAACCATGAC+CGG | - | chr7_3:26730946-26730965 | Msa1098810:intron | 35.0% | |
| !!! | CTTTTTTGGTATTGCTTCGT+CGG | + | chr7_3:26731049-26731068 | None:intergenic | 35.0% |
| AGTTGTAAATCAAAGCAGTG+AGG | + | chr7_3:26731115-26731134 | None:intergenic | 35.0% | |
| ATCAATATATCAATCCCACC+CGG | + | chr7_3:26731163-26731182 | None:intergenic | 35.0% | |
| ATTCTGATTCTGATCACATC+TGG | + | chr7_3:26731240-26731259 | None:intergenic | 35.0% | |
| AATGTATGAAGTTATGCCCT+TGG | - | chr7_3:26731280-26731299 | Msa1098810:intron | 35.0% | |
| AAATAATAGATCGACGCCAA+GGG | + | chr7_3:26731299-26731318 | None:intergenic | 35.0% | |
| TAAATAATAGATCGACGCCA+AGG | + | chr7_3:26731300-26731319 | None:intergenic | 35.0% | |
| CCAGAAATATTTGATGAACC+TGG | + | chr7_3:26731401-26731420 | None:intergenic | 35.0% | |
| CCAGGTTCATCAAATATTTC+TGG | - | chr7_3:26731398-26731417 | Msa1098810:exon | 35.0% | |
| CATACATAACACTGCAAATG+AGG | + | chr7_3:26731487-26731506 | None:intergenic | 35.0% | |
| CTCATTTGCAGTGTTATGTA+TGG | - | chr7_3:26731485-26731504 | Msa1098810:five_prime_UTR | 35.0% | |
| ATTATCAAAAGCGAAGCTGT+TGG | + | chr7_3:26732197-26732216 | None:intergenic | 35.0% | |
| !! | AGCTTCGCTTTTGATAATCA+CGG | - | chr7_3:26732199-26732218 | Msa1098810:intron | 35.0% |
| GTAGGTAACTTGACATTGAA+AGG | + | chr7_3:26732239-26732258 | None:intergenic | 35.0% | |
| GTGTACTAAGATGAAGGTTT+AGG | - | chr7_3:26732309-26732328 | Msa1098810:intron | 35.0% | |
| ! | TCTTCTGGAAGATCGAAATT+TGG | + | chr7_3:26732501-26732520 | None:intergenic | 35.0% |
| AAGAACTGCGCAAATTCAAA+TGG | - | chr7_3:26732529-26732548 | Msa1098810:intron | 35.0% | |
| AGAACTGCGCAAATTCAAAT+GGG | - | chr7_3:26732530-26732549 | Msa1098810:intron | 35.0% | |
| ! | TCTATCGAAGAAAGCATATG+TGG | + | chr7_3:26732621-26732640 | None:intergenic | 35.0% |
| !! | AGACGCAAGTGTTTTATTGT+CGG | + | chr7_3:26732660-26732679 | None:intergenic | 35.0% |
| ! | AAAGAGTGTACATCTCAAGT+TGG | - | chr7_3:26733045-26733064 | Msa1098810:five_prime_UTR | 35.0% |
| ! | AGGGTACCTGAAAAAGGATA+AGG | + | chr7_3:26728357-26728376 | None:intergenic | 40.0% |
| !! | AAGCTAAGGGTACCTGAAAA+AGG | + | chr7_3:26728363-26728382 | None:intergenic | 40.0% |
| AGTCAACAAGCCATTGTTGT+TGG | + | chr7_3:26728389-26728408 | None:intergenic | 40.0% | |
| CTACCACCTTTCTTGGAAAA+GGG | + | chr7_3:26728706-26728725 | None:intergenic | 40.0% | |
| !! | ATGGATGATTTTGACCAAGG+TGG | - | chr7_3:26729040-26729059 | Msa1098810:CDS | 40.0% |
| GAGATTACTTGGACCTATAG+GGG | + | chr7_3:26729652-26729671 | None:intergenic | 40.0% | |
| CGAGATTACTTGGACCTATA+GGG | + | chr7_3:26729653-26729672 | None:intergenic | 40.0% | |
| ACGAGATTACTTGGACCTAT+AGG | + | chr7_3:26729654-26729673 | None:intergenic | 40.0% | |
| TTCTCACAGTATAGAGGAAG+AGG | + | chr7_3:26729913-26729932 | None:intergenic | 40.0% | |
| ATGCTAAACCCAAGAGTGAA+CGG | - | chr7_3:26729962-26729981 | Msa1098810:intron | 40.0% | |
| ! | CTTGCATCATCTGAAAGCAT+AGG | + | chr7_3:26729988-26730007 | None:intergenic | 40.0% |
| GATCTTATTCCTACACTGTC+TGG | + | chr7_3:26730015-26730034 | None:intergenic | 40.0% | |
| CTTCACTTTCCATTTCAACG+AGG | - | chr7_3:26730128-26730147 | Msa1098810:intron | 40.0% | |
| ! | AAAATGAGTTTAGAACCGGG+AGG | - | chr7_3:26730218-26730237 | Msa1098810:intron | 40.0% |
| AAAACCAACTTGAAAGGCGA+GGG | + | chr7_3:26730247-26730266 | None:intergenic | 40.0% | |
| AGTAGCAATCCAAGATTCGT+CGG | - | chr7_3:26730276-26730295 | Msa1098810:intron | 40.0% | |
| !! | ATCTTAGAGGCCGATTTTGT+AGG | - | chr7_3:26730426-26730445 | Msa1098810:intron | 40.0% |
| !! | TCTTAGAGGCCGATTTTGTA+GGG | - | chr7_3:26730427-26730446 | Msa1098810:intron | 40.0% |
| ! | CGATTTTGTAGGGTTGAGTT+AGG | - | chr7_3:26730437-26730456 | Msa1098810:intron | 40.0% |
| TTACTATCGCCTCTTCAGAA+TGG | - | chr7_3:26730659-26730678 | Msa1098810:intron | 40.0% | |
| ! | TGAGCATATCCATTCTGAAG+AGG | + | chr7_3:26730671-26730690 | None:intergenic | 40.0% |
| ! | TGGTTTAATCGGTTCAACCA+TGG | + | chr7_3:26730933-26730952 | None:intergenic | 40.0% |
| AACCAGACTGAAAACTGAAC+TGG | + | chr7_3:26730981-26731000 | None:intergenic | 40.0% | |
| ! | ACAATGAAGCCTTATCACAC+CGG | - | chr7_3:26731141-26731160 | Msa1098810:CDS | 40.0% |
| CTTCTTGCACAACAGTATTC+TGG | + | chr7_3:26731376-26731395 | None:intergenic | 40.0% | |
| TGGTTGAATAAGCAGCTCTT+TGG | + | chr7_3:26731435-26731454 | None:intergenic | 40.0% | |
| GTAAACAACTAACCAAGGGT+TGG | + | chr7_3:26731455-26731474 | None:intergenic | 40.0% | |
| AGTGGACAAGCTGTATCAAA+AGG | + | chr7_3:26731734-26731753 | None:intergenic | 40.0% | |
| GACAAGAAACAGATTCACCT+AGG | - | chr7_3:26732100-26732119 | Msa1098810:intron | 40.0% | |
| AAGCTGCTCACTTATATGAC+AGG | - | chr7_3:26732143-26732162 | Msa1098810:intron | 40.0% | |
| ATACCACTGAGTTCAATCGT+CGG | + | chr7_3:26732270-26732289 | None:intergenic | 40.0% | |
| TTGAACTCAGTGGTATGAGT+TGG | - | chr7_3:26732274-26732293 | Msa1098810:intron | 40.0% | |
| TGAACTCAGTGGTATGAGTT+GGG | - | chr7_3:26732275-26732294 | Msa1098810:intron | 40.0% | |
| GAAGTGGTGTACTAAGATGA+AGG | - | chr7_3:26732303-26732322 | Msa1098810:intron | 40.0% | |
| AGTTCTTGCTTCTCTTCTTC+TGG | + | chr7_3:26732516-26732535 | None:intergenic | 40.0% | |
| ATCCCTTGCACAAAGATGAT+TGG | - | chr7_3:26732822-26732841 | Msa1098810:five_prime_UTR | 40.0% | |
| TCCCTTGCACAAAGATGATT+GGG | - | chr7_3:26732823-26732842 | Msa1098810:five_prime_UTR | 40.0% | |
| TCCCAATCATCTTTGTGCAA+GGG | + | chr7_3:26732827-26732846 | None:intergenic | 40.0% | |
| TTCCCAATCATCTTTGTGCA+AGG | + | chr7_3:26732828-26732847 | None:intergenic | 40.0% | |
| ! | GATGATTGGGAAAGTATGCA+AGG | - | chr7_3:26732836-26732855 | Msa1098810:five_prime_UTR | 40.0% |
| ! | TTAATGGATCTAGCATGAGG+TGG | + | chr7_3:26732934-26732953 | None:intergenic | 40.0% |
| GTTGGACATTGTCAACTTTC+AGG | - | chr7_3:26733063-26733082 | Msa1098810:five_prime_UTR | 40.0% | |
| !! | GAAAAAGAAGGGTGGTGGAA+TGG | + | chr7_3:26728078-26728097 | None:intergenic | 45.0% |
| ACACTGATGAGCTGCAGAAT+CGG | - | chr7_3:26728537-26728556 | Msa1098810:intron | 45.0% | |
| ! | CTACCCTTTTCCAAGAAAGG+TGG | - | chr7_3:26728700-26728719 | Msa1098810:intron | 45.0% |
| CCTACCACCTTTCTTGGAAA+AGG | + | chr7_3:26728707-26728726 | None:intergenic | 45.0% | |
| ! | CCTTTTCCAAGAAAGGTGGT+AGG | - | chr7_3:26728704-26728723 | Msa1098810:intron | 45.0% |
| CATCAACCTACCACCTTTCT+TGG | + | chr7_3:26728713-26728732 | None:intergenic | 45.0% | |
| ! | CAAGAAAGGTGGTAGGTTGA+TGG | - | chr7_3:26728711-26728730 | Msa1098810:intron | 45.0% |
| TGCTCTTTCAAACGCACGTT+TGG | - | chr7_3:26729550-26729569 | Msa1098810:intron | 45.0% | |
| AAAGGAACTGCTTCCTGCAA+AGG | + | chr7_3:26729884-26729903 | None:intergenic | 45.0% | |
| TAGAGGAAGAGGAGAGACAA+AGG | + | chr7_3:26729902-26729921 | None:intergenic | 45.0% | |
| CAAAACCAACTTGAAAGGCG+AGG | + | chr7_3:26730248-26730267 | None:intergenic | 45.0% | |
| AACTTGAGTGGTCCGATAGT+GGG | + | chr7_3:26730306-26730325 | None:intergenic | 45.0% | |
| TAACTTGAGTGGTCCGATAG+TGG | + | chr7_3:26730307-26730326 | None:intergenic | 45.0% | |
| CTTAACACGCTCTTGTGTCT+AGG | + | chr7_3:26730347-26730366 | None:intergenic | 45.0% | |
| GGATGCATCACTGATCTTAG+AGG | - | chr7_3:26730413-26730432 | Msa1098810:intron | 45.0% | |
| TCTTTCATCCGGTTCAACCA+TGG | - | chr7_3:26730913-26730932 | Msa1098810:intron | 45.0% | |
| ! | CACCAGTTCAGTTTTCAGTC+TGG | - | chr7_3:26730976-26730995 | Msa1098810:intron | 45.0% |
| GTATTGCTTCGTCGGTAACA+AGG | + | chr7_3:26731041-26731060 | None:intergenic | 45.0% | |
| GTGATAAGGCTTCATTGTGG+TGG | + | chr7_3:26731139-26731158 | None:intergenic | 45.0% | |
| GGTGTGATAAGGCTTCATTG+TGG | + | chr7_3:26731142-26731161 | None:intergenic | 45.0% | |
| ! | CAATGAAGCCTTATCACACC+GGG | - | chr7_3:26731142-26731161 | Msa1098810:CDS | 45.0% |
| ACTGTTGTGCAAGAAGAACC+AGG | - | chr7_3:26731380-26731399 | Msa1098810:CDS | 45.0% | |
| CTGCTTATTCAACCAACCCT+TGG | - | chr7_3:26731440-26731459 | Msa1098810:five_prime_UTR | 45.0% | |
| TCAAACGTAGGAAGCGACAT+AGG | - | chr7_3:26731996-26732015 | Msa1098810:intron | 45.0% | |
| AGTCAAGAAGTCAGCATGAG+AGG | - | chr7_3:26732034-26732053 | Msa1098810:intron | 45.0% | |
| ! | CAGATTCACCTAGGTACTGT+TGG | - | chr7_3:26732109-26732128 | Msa1098810:intron | 45.0% |
| TACCACTGAGTTCAATCGTC+GGG | + | chr7_3:26732269-26732288 | None:intergenic | 45.0% | |
| ! | TATGAGTTGGGACACTGAAG+TGG | - | chr7_3:26732287-26732306 | Msa1098810:intron | 45.0% |
| ! | TTTAGGGCTGCTTTCATGTG+TGG | - | chr7_3:26732468-26732487 | Msa1098810:intron | 45.0% |
| ! | TTAGGGCTGCTTTCATGTGT+GGG | - | chr7_3:26732469-26732488 | Msa1098810:intron | 45.0% |
| ! | GAAAGTATGCAAGGAGTGAG+TGG | - | chr7_3:26732845-26732864 | Msa1098810:five_prime_UTR | 45.0% |
| !! | AGAAGGGTGGTGGAATGGAA+GGG | + | chr7_3:26728073-26728092 | None:intergenic | 50.0% |
| !! | AAGAAGGGTGGTGGAATGGA+AGG | + | chr7_3:26728074-26728093 | None:intergenic | 50.0% |
| ACACACTCAGACACGGACAT+CGG | + | chr7_3:26728499-26728518 | None:intergenic | 50.0% | |
| ACGAAGCACACACTCAGACA+CGG | + | chr7_3:26728506-26728525 | None:intergenic | 50.0% | |
| ! | TGGTAAGCTTAAGAAGGCGC+AGG | - | chr7_3:26729760-26729779 | Msa1098810:CDS | 50.0% |
| ! | TTAAGAAGGCGCAGGCTCTT+GGG | - | chr7_3:26729768-26729787 | Msa1098810:CDS | 50.0% |
| GACTATGCTCAGGTACACGT+CGG | - | chr7_3:26729790-26729809 | Msa1098810:intron | 50.0% | |
| AGCATAGGCCGTTCACTCTT+GGG | + | chr7_3:26729973-26729992 | None:intergenic | 50.0% | |
| AAGCATAGGCCGTTCACTCT+TGG | + | chr7_3:26729974-26729993 | None:intergenic | 50.0% | |
| GGATATGCTCAATAGCGCCA+TGG | - | chr7_3:26730680-26730699 | Msa1098810:intron | 50.0% | |
| ATGCTCAATAGCGCCATGGT+TGG | - | chr7_3:26730684-26730703 | Msa1098810:intron | 50.0% | |
| ! | TCGACCACTTTAGCTCGCTT+CGG | - | chr7_3:26730786-26730805 | Msa1098810:intron | 50.0% |
| AATGCCGAAGCGAGCTAAAG+TGG | + | chr7_3:26730793-26730812 | None:intergenic | 50.0% | |
| CGGTTCAACCATGGTTGAAC+CGG | + | chr7_3:26730922-26730941 | None:intergenic | 50.0% | |
| CCTTCCGGTCATGGTTCAAT+TGG | + | chr7_3:26730953-26730972 | None:intergenic | 50.0% | |
| CCAATTGAACCATGACCGGA+AGG | - | chr7_3:26730950-26730969 | Msa1098810:intron | 50.0% | |
| ACTGAACTGGTGAGACCTTC+CGG | + | chr7_3:26730968-26730987 | None:intergenic | 50.0% | |
| CTTGCGATCCAACAGTACCT+AGG | + | chr7_3:26732120-26732139 | None:intergenic | 50.0% | |
| ACCACTGAGTTCAATCGTCG+GGG | + | chr7_3:26732268-26732287 | None:intergenic | 50.0% | |
| ! | CTTAAGAAGGCGCAGGCTCT+TGG | - | chr7_3:26729767-26729786 | Msa1098810:CDS | 55.0% |
| AGGCTCTTGGGACTATGCTC+AGG | - | chr7_3:26729780-26729799 | Msa1098810:intron | 55.0% | |
| GCAAGCATCCCAGACAGTGT+AGG | - | chr7_3:26730003-26730022 | Msa1098810:intron | 55.0% | |
| ! | GCATCCCTCGCCTTTCAAGT+TGG | - | chr7_3:26730240-26730259 | Msa1098810:intron | 55.0% |
| TTCGTCGGACCACCCACTAT+CGG | - | chr7_3:26730291-26730310 | Msa1098810:intron | 55.0% | |
| !! | TTGAGTGGTCCGATAGTGGG+TGG | + | chr7_3:26730303-26730322 | None:intergenic | 55.0% |
| ! | CACGCTCTTGTGTCTAGGAC+TGG | + | chr7_3:26730342-26730361 | None:intergenic | 55.0% |
| ! | TGAAGCCTTATCACACCGGG+TGG | - | chr7_3:26731145-26731164 | Msa1098810:CDS | 55.0% |
| ! | GAAGCCTTATCACACCGGGT+GGG | - | chr7_3:26731146-26731165 | Msa1098810:CDS | 55.0% |
| CAATCCCACCCGGTGTGATA+AGG | + | chr7_3:26731153-26731172 | None:intergenic | 55.0% | |
| CAGGACCTGCTGTCAAACGT+AGG | - | chr7_3:26731984-26732003 | Msa1098810:intron | 55.0% | |
| CGCTTCCTACGTTTGACAGC+AGG | + | chr7_3:26731992-26732011 | None:intergenic | 55.0% | |
| CAATCGTCGGGGACAGAAGT+AGG | + | chr7_3:26732257-26732276 | None:intergenic | 55.0% | |
| TCCCCGACGATTGAACTCAG+TGG | - | chr7_3:26732264-26732283 | Msa1098810:intron | 55.0% | |
| !! | AGGGTGGTGGAATGGAAGGG+TGG | + | chr7_3:26728070-26728089 | None:intergenic | 60.0% |
| GTGGGTGGTCCGACGAATCT+TGG | + | chr7_3:26730288-26730307 | None:intergenic | 60.0% | |
| CTGGTGAGACCTTCCGGTCA+TGG | + | chr7_3:26730962-26730981 | None:intergenic | 60.0% | |
| GAAAGGCGAGGGATGCCTCC+CGG | + | chr7_3:26730236-26730255 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 26727997 | 26733175 | 26727997 | ID=Msa1098810;Name=Msa1098810 |
| chr7_3 | mRNA | 26727997 | 26733175 | 26727997 | ID=Msa1098810-mRNA-1;Parent=Msa1098810;Name=Msa1098810-mRNA-1;_AED=0.25;_eAED=0.25;_QI=529|0.83|0.85|1|0.83|0.71|7|262|239 |
| chr7_3 | exon | 26727997 | 26728398 | 26727997 | ID=Msa1098810-mRNA-1:exon:5683;Parent=Msa1098810-mRNA-1 |
| chr7_3 | exon | 26728578 | 26728699 | 26728578 | ID=Msa1098810-mRNA-1:exon:5682;Parent=Msa1098810-mRNA-1 |
| chr7_3 | exon | 26729008 | 26729185 | 26729008 | ID=Msa1098810-mRNA-1:exon:5681;Parent=Msa1098810-mRNA-1 |
| chr7_3 | exon | 26729711 | 26729795 | 26729711 | ID=Msa1098810-mRNA-1:exon:5680;Parent=Msa1098810-mRNA-1 |
| chr7_3 | exon | 26731131 | 26731282 | 26731131 | ID=Msa1098810-mRNA-1:exon:5679;Parent=Msa1098810-mRNA-1 |
| chr7_3 | exon | 26731371 | 26731514 | 26731371 | ID=Msa1098810-mRNA-1:exon:5678;Parent=Msa1098810-mRNA-1 |
| chr7_3 | exon | 26732748 | 26733175 | 26732748 | ID=Msa1098810-mRNA-1:exon:5677;Parent=Msa1098810-mRNA-1 |
| chr7_3 | five_prime_UTR | 26732748 | 26733175 | 26732748 | ID=Msa1098810-mRNA-1:five_prime_utr;Parent=Msa1098810-mRNA-1 |
| chr7_3 | five_prime_UTR | 26731414 | 26731514 | 26731414 | ID=Msa1098810-mRNA-1:five_prime_utr;Parent=Msa1098810-mRNA-1 |
| chr7_3 | CDS | 26731371 | 26731413 | 26731371 | ID=Msa1098810-mRNA-1:cds;Parent=Msa1098810-mRNA-1 |
| chr7_3 | CDS | 26731131 | 26731282 | 26731131 | ID=Msa1098810-mRNA-1:cds;Parent=Msa1098810-mRNA-1 |
| chr7_3 | CDS | 26729711 | 26729795 | 26729711 | ID=Msa1098810-mRNA-1:cds;Parent=Msa1098810-mRNA-1 |
| chr7_3 | CDS | 26729008 | 26729185 | 26729008 | ID=Msa1098810-mRNA-1:cds;Parent=Msa1098810-mRNA-1 |
| chr7_3 | CDS | 26728578 | 26728699 | 26728578 | ID=Msa1098810-mRNA-1:cds;Parent=Msa1098810-mRNA-1 |
| chr7_3 | CDS | 26728259 | 26728398 | 26728259 | ID=Msa1098810-mRNA-1:cds;Parent=Msa1098810-mRNA-1 |
| chr7_3 | three_prime_UTR | 26727997 | 26728258 | 26727997 | ID=Msa1098810-mRNA-1:three_prime_utr;Parent=Msa1098810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
