AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1098910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1098910 MtrunA17_Chr7g0218831 89.931 437 44 0 1 437 1 437 0.0 818
Msa1098910 MtrunA17_Chr7g0218841 87.900 438 52 1 1 437 1 438 0.0 800
Msa1098910 MtrunA17_Chr7g0218811 70.320 438 128 2 1 437 11 447 0.0 645
Msa1098910 MtrunA17_Chr7g0218821 67.257 452 135 3 1 440 1 451 0.0 637
Msa1098910 MtrunA17_Chr7g0218791 55.506 445 186 5 5 440 4 445 0.0 514
Msa1098910 MtrunA17_Chr3g0078841 32.128 470 277 10 5 436 9 474 7.23e-75 242
Msa1098910 MtrunA17_Chr5g0448551 31.702 429 271 11 5 419 6 426 2.11e-72 235
Msa1098910 MtrunA17_Chr7g0217881 33.047 466 268 12 5 439 9 461 2.75e-72 235
Msa1098910 MtrunA17_Chr6g0454341 31.579 475 273 12 5 436 9 474 6.50e-72 234
Msa1098910 MtrunA17_Chr6g0454401 31.866 477 278 14 5 439 9 480 6.85e-71 231
Msa1098910 MtrunA17_Chr8g0336331 31.078 473 275 11 6 436 10 473 1.11e-70 231
Msa1098910 MtrunA17_Chr2g0278711 32.696 471 277 13 5 439 10 476 4.35e-69 227
Msa1098910 MtrunA17_Chr6g0454181 30.462 476 285 12 5 439 9 479 6.50e-69 226
Msa1098910 MtrunA17_Chr6g0454321 30.947 475 276 14 6 440 10 472 9.00e-69 230
Msa1098910 MtrunA17_Chr6g0454261 29.810 473 286 9 5 436 9 476 9.89e-69 226
Msa1098910 MtrunA17_Chr6g0454141 30.228 483 277 12 5 439 9 479 2.74e-68 225
Msa1098910 MtrunA17_Chr6g0453961 31.809 481 273 13 5 439 18 489 2.94e-68 225
Msa1098910 MtrunA17_Chr6g0454191 31.237 477 281 15 5 439 9 480 5.25e-68 224
Msa1098910 MtrunA17_Chr6g0454151 30.737 475 283 11 5 439 9 477 6.99e-68 224
Msa1098910 MtrunA17_Chr6g0454331 32.150 479 275 13 5 439 6 478 9.48e-68 223
Msa1098910 MtrunA17_Chr6g0453951 30.316 475 287 11 5 439 56 526 1.54e-67 224
Msa1098910 MtrunA17_Chr3g0118661 30.380 474 279 11 5 436 12 476 3.07e-67 222
Msa1098910 MtrunA17_Chr6g0454291 31.144 472 281 12 5 436 6 473 4.60e-67 221
Msa1098910 MtrunA17_Chr3g0118691 31.224 474 282 11 5 439 14 482 7.91e-67 221
Msa1098910 MtrunA17_Chr8g0359821 30.689 479 278 12 5 439 9 477 8.17e-67 221
Msa1098910 MtrunA17_Chr3g0118701 31.723 476 277 13 5 439 14 482 1.06e-66 221
Msa1098910 MtrunA17_Chr3g0118671 31.712 473 279 12 6 439 6 473 1.09e-66 220
Msa1098910 MtrunA17_Chr6g0454361 30.498 482 281 11 3 439 8 480 8.72e-66 218
Msa1098910 MtrunA17_Chr6g0454211 30.720 472 283 12 5 436 296 763 1.15e-65 224
Msa1098910 MtrunA17_Chr6g0454211 37.888 161 57 5 210 356 105 236 1.72e-23 103
Msa1098910 MtrunA17_Chr3g0092641 33.259 451 258 13 4 417 10 454 7.40e-65 216
Msa1098910 MtrunA17_Chr7g0249981 31.155 459 274 13 6 439 25 466 7.52e-65 216
Msa1098910 MtrunA17_Chr6g0454301 30.786 471 282 12 5 436 262 727 7.95e-65 221
Msa1098910 MtrunA17_Chr6g0454301 37.288 236 123 5 224 438 3 234 2.45e-42 159
Msa1098910 MtrunA17_Chr5g0426431 33.051 472 270 15 4 436 10 474 1.03e-64 215
Msa1098910 MtrunA17_Chr3g0118771 30.297 472 283 12 5 436 20 485 1.57e-63 213
Msa1098910 MtrunA17_Chr5g0423981 30.573 471 256 14 5 439 9 444 2.26e-63 211
Msa1098910 MtrunA17_Chr3g0118711 30.526 475 284 13 5 439 12 480 3.37e-63 211
Msa1098910 MtrunA17_Chr6g0454131 29.622 476 282 10 5 436 9 475 5.64e-63 211
Msa1098910 MtrunA17_Chr6g0464871 30.736 462 278 12 4 439 21 466 2.59e-62 209
Msa1098910 MtrunA17_Chr6g0454121 30.462 476 278 11 5 436 9 475 6.79e-62 208
Msa1098910 MtrunA17_Chr6g0464861 32.181 463 267 15 5 439 10 453 3.46e-61 205
Msa1098910 MtrunA17_Chr6g0454201 30.544 478 286 13 3 439 8 480 4.28e-61 206
Msa1098910 MtrunA17_Chr6g0452771 30.208 480 281 12 5 439 9 479 1.67e-60 204
Msa1098910 MtrunA17_Chr4g0053321 29.677 465 277 13 8 437 28 477 9.57e-59 200
Msa1098910 MtrunA17_Chr5g0412111 29.895 475 280 11 5 441 4 463 1.65e-58 199
Msa1098910 MtrunA17_Chr6g0464881 28.884 457 289 12 4 437 9 452 6.75e-58 197
Msa1098910 MtrunA17_Chr6g0464921 29.654 462 278 13 5 437 10 453 7.01e-58 197
Msa1098910 MtrunA17_Chr5g0414321 31.087 460 266 15 6 436 11 448 8.36e-58 197
Msa1098910 MtrunA17_Chr4g0053501 29.550 467 279 12 6 437 11 462 1.16e-57 197
Msa1098910 MtrunA17_Chr5g0414331 32.251 462 258 16 6 436 13 450 1.51e-57 196
Msa1098910 MtrunA17_Chr6g0454351 28.000 475 281 11 5 439 11 464 3.42e-57 195
Msa1098910 MtrunA17_Chr4g0050341 27.708 480 289 12 5 436 18 487 3.55e-57 196
Msa1098910 MtrunA17_Chr6g0464841 30.952 462 277 14 4 439 9 454 6.52e-57 194
Msa1098910 MtrunA17_Chr3g0118751 30.128 468 260 13 5 436 5 441 3.56e-56 192
Msa1098910 MtrunA17_Chr8g0380531 30.435 460 284 13 6 440 10 458 1.54e-55 191
Msa1098910 MtrunA17_Chr7g0250001 28.228 457 290 11 6 439 6 447 2.34e-55 190
Msa1098910 MtrunA17_Chr1g0207981 27.056 462 301 8 6 436 13 469 1.72e-54 188
Msa1098910 MtrunA17_Chr6g0454251 29.487 390 238 10 5 357 6 395 2.00e-54 186
Msa1098910 MtrunA17_Chr5g0412131 29.140 477 284 13 4 441 10 471 3.11e-54 187
Msa1098910 MtrunA17_Chr3g0112761 30.853 457 272 17 6 436 8 446 2.82e-53 184
Msa1098910 MtrunA17_Chr7g0249931 27.609 460 291 13 6 439 40 483 5.21e-51 179
Msa1098910 MtrunA17_Chr3g0112771 29.490 451 282 14 8 437 14 449 1.96e-50 177
Msa1098910 MtrunA17_Chr8g0377921 27.447 470 300 13 4 439 1 463 2.59e-50 177
Msa1098910 MtrunA17_Chr6g0454271 35.600 250 136 6 207 436 39 283 4.75e-50 171
Msa1098910 MtrunA17_Chr5g0412101 28.721 477 285 11 5 441 11 472 5.64e-50 176
Msa1098910 MtrunA17_Chr6g0454221 39.301 229 119 4 224 436 3 227 2.13e-49 170
Msa1098910 MtrunA17_Chr3g0098111 28.601 486 272 17 6 440 9 470 2.45e-49 174
Msa1098910 MtrunA17_Chr3g0121991 28.274 481 287 16 6 439 79 548 5.94e-49 175
Msa1098910 MtrunA17_Chr7g0243681 29.339 484 281 16 6 441 11 481 2.63e-48 172
Msa1098910 MtrunA17_Chr1g0161351 29.263 475 283 15 6 440 37 498 3.18e-47 169
Msa1098910 MtrunA17_Chr7g0232331 28.097 452 278 14 1 417 1 440 7.87e-47 167
Msa1098910 MtrunA17_Chr7g0232411 27.542 472 288 14 6 437 6 463 9.79e-47 167
Msa1098910 MtrunA17_Chr5g0401721 27.719 469 294 13 8 439 10 470 1.93e-46 167
Msa1098910 MtrunA17_Chr7g0232401 30.814 344 208 9 118 435 124 463 2.48e-46 166
Msa1098910 MtrunA17_Chr5g0431441 28.540 459 292 13 6 439 18 465 3.50e-46 166
Msa1098910 MtrunA17_Chr3g0122001 28.099 484 275 18 6 436 486 949 3.99e-46 171
Msa1098910 MtrunA17_Chr3g0122001 27.846 492 276 20 6 439 6 476 1.60e-42 160
Msa1098910 MtrunA17_Chr7g0243631 29.448 489 279 17 6 441 13 488 5.33e-46 166
Msa1098910 MtrunA17_Chr8g0377941 28.078 463 286 14 8 436 9 458 2.40e-45 164
Msa1098910 MtrunA17_Chr1g0207971 27.349 479 272 15 6 440 8 454 3.54e-45 163
Msa1098910 MtrunA17_Chr7g0275681 26.875 480 292 13 4 436 10 477 4.76e-45 163
Msa1098910 MtrunA17_Chr1g0207861 28.992 476 283 18 6 440 8 469 7.81e-45 162
Msa1098910 MtrunA17_Chr6g0459311 27.902 448 271 11 9 419 16 448 1.01e-44 162
Msa1098910 MtrunA17_Chr7g0243871 27.743 483 281 13 8 441 11 474 1.51e-44 162
Msa1098910 MtrunA17_Chr8g0347281 27.646 463 286 14 5 432 17 465 1.61e-44 161
Msa1098910 MtrunA17_Chr7g0243931 28.099 484 292 15 6 441 17 492 2.06e-44 162
Msa1098910 MtrunA17_Chr7g0232391 27.447 470 291 13 6 437 6 463 2.69e-44 160
Msa1098910 MtrunA17_Chr4g0044521 27.564 468 283 15 11 438 14 465 4.09e-44 160
Msa1098910 MtrunA17_Chr7g0249961 36.910 233 128 5 222 439 31 259 5.22e-44 155
Msa1098910 MtrunA17_Chr6g0462521 31.180 356 204 13 97 428 101 439 5.33e-44 160
Msa1098910 MtrunA17_Chr8g0336651 28.918 453 266 13 6 417 781 1218 5.73e-44 165
Msa1098910 MtrunA17_Chr8g0336651 28.112 466 270 14 6 430 6 447 5.78e-40 153
Msa1098910 MtrunA17_Chr8g0336651 32.558 258 142 7 191 435 532 770 3.41e-35 139
Msa1098910 MtrunA17_Chr8g0347271 27.021 470 280 15 5 432 18 466 8.05e-44 159
Msa1098910 MtrunA17_Chr8g0334851 26.625 477 286 14 1 439 1 451 8.10e-44 159
Msa1098910 MtrunA17_Chr8g0365811 28.390 472 291 15 8 441 497 959 9.97e-44 164
Msa1098910 MtrunA17_Chr8g0365811 29.234 431 255 16 6 396 9 429 1.04e-41 158
Msa1098910 MtrunA17_Chr7g0243771 27.917 480 294 13 6 441 6 477 1.07e-43 159
Msa1098910 MtrunA17_Chr8g0335161 28.821 458 258 16 6 417 6 441 1.28e-43 159
Msa1098910 MtrunA17_Chr7g0275511 26.846 447 283 11 5 417 14 450 1.80e-43 159
Msa1098910 MtrunA17_Chr4g0032331 29.535 430 260 15 6 410 8 419 2.17e-43 158
Msa1098910 MtrunA17_Chr4g0060511 27.935 494 283 17 6 441 11 489 3.27e-43 158
Msa1098910 MtrunA17_Chr1g0207831 28.602 472 283 18 7 440 9 464 3.48e-43 158
Msa1098910 MtrunA17_Chr1g0207951 29.661 472 271 19 6 440 124 571 4.38e-43 162
Msa1098910 MtrunA17_Chr1g0207951 28.511 470 279 16 8 439 658 1108 2.54e-42 160
Msa1098910 MtrunA17_Chr6g0486251 28.166 458 259 12 9 420 9 442 6.76e-43 157
Msa1098910 MtrunA17_Chr6g0486201 28.166 458 259 12 9 420 9 442 6.76e-43 157
Msa1098910 MtrunA17_Chr7g0232341 26.770 452 284 11 1 417 1 440 7.39e-43 157
Msa1098910 MtrunA17_Chr8g0336691 27.837 467 290 12 6 435 13 469 2.38e-42 160
Msa1098910 MtrunA17_Chr8g0336691 28.412 447 274 11 6 417 919 1354 3.91e-41 156
Msa1098910 MtrunA17_Chr8g0336691 28.276 435 262 12 6 417 480 887 1.40e-36 143
Msa1098910 MtrunA17_Chr4g0044511 28.310 491 273 22 6 441 40 506 9.41e-42 154
Msa1098910 MtrunA17_Chr7g0243951 28.099 484 291 16 6 441 11 485 1.73e-41 154
Msa1098910 MtrunA17_Chr7g0243801 28.151 476 290 14 10 441 11 478 2.12e-41 153
Msa1098910 MtrunA17_Chr7g0265141 27.364 497 272 18 6 436 9 482 2.23e-41 153
Msa1098910 MtrunA17_Chr8g0336741 28.043 460 278 13 6 430 13 454 2.61e-41 152
Msa1098910 MtrunA17_Chr6g0454171 35.537 242 118 6 210 436 88 306 3.27e-41 149
Msa1098910 MtrunA17_Chr1g0153451 28.188 447 272 11 6 417 6 438 1.10e-40 151
Msa1098910 MtrunA17_Chr6g0462541 30.460 348 199 11 97 415 106 439 1.27e-40 151
Msa1098910 MtrunA17_Chr6g0449931 27.957 465 287 16 6 432 6 460 1.41e-40 150
Msa1098910 MtrunA17_Chr7g0243781 28.778 483 275 18 10 441 13 477 1.96e-40 150
Msa1098910 MtrunA17_Chr6g0462531 27.660 470 283 18 9 435 5 460 2.00e-40 150
Msa1098910 MtrunA17_Chr3g0118721 36.715 207 120 4 240 439 87 289 2.24e-40 146
Msa1098910 MtrunA17_Chr6g0462571 25.800 469 290 15 9 435 5 457 4.10e-40 149
Msa1098910 MtrunA17_Chr8g0373301 28.488 344 215 10 118 435 124 462 4.70e-40 149
Msa1098910 MtrunA17_Chr8g0339441 32.476 311 163 11 165 435 122 425 6.82e-40 148
Msa1098910 MtrunA17_Chr8g0339461 31.429 350 204 11 118 435 122 467 7.09e-40 149
Msa1098910 MtrunA17_Chr7g0243861 27.495 491 286 15 6 441 14 489 1.16e-39 149
Msa1098910 MtrunA17_Chr8g0339451 31.143 350 205 11 118 435 114 459 1.19e-39 148
Msa1098910 MtrunA17_Chr5g0419761 28.504 421 239 13 6 381 9 412 1.75e-39 148
Msa1098910 MtrunA17_Chr7g0265041 26.283 487 295 14 4 436 9 485 2.02e-39 148
Msa1098910 MtrunA17_Chr6g0462551 28.415 366 225 11 97 435 105 460 2.07e-39 147
Msa1098910 MtrunA17_Chr5g0426401 35.616 219 128 4 211 421 78 291 2.37e-39 144
Msa1098910 MtrunA17_Chr5g0393591 25.974 462 279 13 3 440 14 436 2.89e-39 147
Msa1098910 MtrunA17_Chr8g0366391 28.310 491 277 20 6 441 9 479 8.71e-39 146
Msa1098910 MtrunA17_Chr8g0334861 29.705 441 256 16 6 408 6 430 1.14e-38 145
Msa1098910 MtrunA17_Chr7g0235051 27.907 473 258 16 6 432 11 446 1.27e-38 145
Msa1098910 MtrunA17_Chr8g0336731 28.763 372 217 10 90 430 119 473 1.29e-38 145
Msa1098910 MtrunA17_Chr1g0207931 34.783 230 133 7 228 440 269 498 2.11e-38 145
Msa1098910 MtrunA17_Chr7g0232311 26.059 472 295 14 5 437 5 461 2.74e-38 144
Msa1098910 MtrunA17_Chr3g0106231 25.847 472 274 14 3 436 15 448 4.24e-38 144
Msa1098910 MtrunA17_Chr8g0335141 26.696 457 282 14 1 419 4 445 5.13e-38 144
Msa1098910 MtrunA17_Chr7g0243761 27.197 478 274 15 6 441 11 456 1.70e-37 142
Msa1098910 MtrunA17_Chr5g0403641 33.096 281 145 10 176 421 209 481 3.08e-37 142
Msa1098910 MtrunA17_Chr8g0339601 41.624 197 94 7 229 405 99 294 3.58e-37 138
Msa1098910 MtrunA17_Chr2g0307961 24.301 465 302 11 5 433 12 462 1.11e-36 140
Msa1098910 MtrunA17_Chr7g0265151 25.306 490 289 19 6 436 9 480 1.83e-36 139
Msa1098910 MtrunA17_Chr7g0265051 25.358 489 291 16 6 436 9 481 1.90e-36 140
Msa1098910 MtrunA17_Chr8g0339631 29.944 354 211 12 118 440 122 469 5.08e-36 138
Msa1098910 MtrunA17_Chr4g0011051 25.662 491 290 19 6 436 9 484 3.04e-35 136
Msa1098910 MtrunA17_Chr4g0066281 26.471 476 287 13 7 440 13 467 3.13e-35 136
Msa1098910 MtrunA17_Chr5g0429711 27.957 465 284 17 6 436 11 458 3.32e-35 135
Msa1098910 MtrunA17_Chr4g0044481 28.218 404 227 14 6 379 27 397 4.89e-35 134
Msa1098910 MtrunA17_Chr4g0066201 28.964 473 275 19 10 440 22 475 5.50e-35 135
Msa1098910 MtrunA17_Chr8g0355011 26.571 350 201 9 106 436 46 358 2.95e-34 131
Msa1098910 MtrunA17_Chr1g0153461 37.297 185 100 4 249 417 3 187 3.92e-34 127
Msa1098910 MtrunA17_Chr7g0265101 32.883 222 128 6 234 436 264 483 4.71e-34 133
Msa1098910 MtrunA17_Chr5g0431361 26.124 467 291 17 6 441 12 455 5.81e-34 132
Msa1098910 MtrunA17_Chr5g0442491 23.591 479 304 13 10 439 9 474 6.63e-34 132
Msa1098910 MtrunA17_Chr4g0066131 26.240 484 279 16 10 440 17 475 7.14e-34 132
Msa1098910 MtrunA17_Chr5g0428081 27.733 494 272 19 6 440 13 480 7.88e-34 132
Msa1098910 MtrunA17_Chr7g0243711 31.683 303 165 11 173 441 24 318 1.20e-33 129
Msa1098910 MtrunA17_Chr4g0066261 26.230 488 289 18 6 440 13 482 1.21e-33 132
Msa1098910 MtrunA17_Chr4g0066171 27.027 481 273 17 10 440 25 477 1.35e-33 131
Msa1098910 MtrunA17_Chr8g0382021 25.160 469 292 14 11 439 39 488 1.88e-33 131
Msa1098910 MtrunA17_Chr5g0440421 25.709 494 300 18 5 441 9 492 2.73e-33 131
Msa1098910 MtrunA17_Chr5g0401851 25.000 488 298 17 8 441 12 485 3.01e-33 130
Msa1098910 MtrunA17_Chr6g0454371 36.257 171 99 3 272 436 1 167 3.06e-33 123
Msa1098910 MtrunA17_Chr5g0448521 24.537 432 275 12 10 408 9 422 3.77e-33 130
Msa1098910 MtrunA17_Chr5g0431371 25.054 467 293 15 6 441 10 450 5.41e-33 129
Msa1098910 MtrunA17_Chr4g0044501 26.271 472 298 15 6 436 10 472 6.50e-33 129
Msa1098910 MtrunA17_Chr2g0329111 24.086 465 297 14 8 427 8 461 9.40e-33 129
Msa1098910 MtrunA17_Chr5g0442541 24.684 474 296 15 10 439 9 465 1.28e-32 129
Msa1098910 MtrunA17_Chr8g0361371 24.053 449 286 14 9 418 10 442 1.44e-32 129
Msa1098910 MtrunA17_Chr8g0374901 26.446 484 285 16 9 440 15 479 1.88e-32 128
Msa1098910 MtrunA17_Chr7g0243911 34.300 207 113 5 245 435 17 216 2.51e-32 122
Msa1098910 MtrunA17_Chr1g0159551 22.343 461 306 10 11 439 19 459 2.79e-32 127
Msa1098910 MtrunA17_Chr5g0410941 25.000 488 291 17 6 440 25 490 4.06e-32 127
Msa1098910 MtrunA17_Chr7g0243851 35.514 214 119 5 247 441 231 444 4.42e-32 127
Msa1098910 MtrunA17_Chr6g0463891 25.203 492 291 17 8 441 14 486 4.83e-32 127
Msa1098910 MtrunA17_Chr4g0066151 25.979 485 279 16 10 440 22 480 5.51e-32 127
Msa1098910 MtrunA17_Chr5g0431421 24.946 461 293 14 6 437 10 446 6.25e-32 126
Msa1098910 MtrunA17_Chr4g0072771 25.926 459 301 15 6 441 25 467 7.57e-32 126
Msa1098910 MtrunA17_Chr5g0431401 24.459 462 302 13 6 441 10 450 8.08e-32 126
Msa1098910 MtrunA17_Chr8g0374931 25.988 481 299 16 6 440 13 482 9.62e-32 126
Msa1098910 MtrunA17_Chr1g0173121 27.957 279 165 5 190 439 191 462 1.33e-31 125
Msa1098910 MtrunA17_Chr5g0442601 22.737 475 319 12 8 439 406 875 2.85e-31 127
Msa1098910 MtrunA17_Chr5g0442601 33.918 171 90 5 228 376 166 335 1.09e-22 101
Msa1098910 MtrunA17_Chr7g0218311 33.937 221 122 6 244 440 264 484 3.80e-31 125
Msa1098910 MtrunA17_Chr8g0334831 23.348 454 291 14 9 418 9 449 4.97e-31 124
Msa1098910 MtrunA17_Chr8g0336261 39.716 141 77 3 272 408 1 137 1.04e-30 115
Msa1098910 MtrunA17_Chr3g0079731 32.340 235 136 7 224 436 244 477 1.16e-30 123
Msa1098910 MtrunA17_Chr5g0442561 22.505 471 317 16 10 439 9 472 1.16e-30 123
Msa1098910 MtrunA17_Chr4g0066221 35.321 218 114 8 249 440 265 481 1.30e-30 123
Msa1098910 MtrunA17_Chr7g0243611 33.962 212 118 6 197 388 71 280 1.89e-30 119
Msa1098910 MtrunA17_Chr6g0463861 25.577 477 290 19 6 436 13 470 2.31e-30 122
Msa1098910 MtrunA17_Chr8g0336251 25.104 482 289 16 6 440 7 463 2.37e-30 122
Msa1098910 MtrunA17_Chr5g0416741 23.651 482 309 14 8 441 15 485 2.91e-30 122
Msa1098910 MtrunA17_Chr4g0014061 24.580 476 293 16 9 436 12 469 3.02e-30 122
Msa1098910 MtrunA17_Chr5g0419771 31.513 238 134 6 229 437 273 510 3.28e-30 122
Msa1098910 MtrunA17_Chr8g0374971 33.180 217 120 5 249 440 265 481 4.38e-30 122
Msa1098910 MtrunA17_Chr5g0429681 25.424 472 296 15 7 439 45 499 5.09e-30 122
Msa1098910 MtrunA17_Chr8g0336321 25.104 482 289 16 6 440 7 463 5.63e-30 121
Msa1098910 MtrunA17_Chr7g0241781 26.603 421 275 16 6 417 9 404 6.21e-30 120
Msa1098910 MtrunA17_Chr2g0294941 31.325 249 141 7 209 434 123 364 6.34e-30 119
Msa1098910 MtrunA17_Chr2g0294931 34.419 215 117 6 250 440 268 482 7.08e-30 121
Msa1098910 MtrunA17_Chr5g0420801 25.314 478 289 19 6 440 7 459 1.44e-29 120
Msa1098910 MtrunA17_Chr7g0265111 30.962 239 134 6 229 436 274 512 1.68e-29 120
Msa1098910 MtrunA17_Chr5g0442581 23.158 475 313 13 10 439 9 476 2.73e-29 120
Msa1098910 MtrunA17_Chr3g0106251 27.875 287 171 6 172 439 24 293 3.24e-29 116
Msa1098910 MtrunA17_Chr5g0409591 34.375 192 105 5 236 408 263 452 3.66e-29 119
Msa1098910 MtrunA17_Chr2g0294921 24.845 483 302 14 6 440 162 631 6.19e-29 119
Msa1098910 MtrunA17_Chr8g0374941 33.028 218 119 8 249 440 1202 1418 8.29e-29 120
Msa1098910 MtrunA17_Chr8g0374941 35.000 180 94 6 249 406 264 442 2.58e-27 115
Msa1098910 MtrunA17_Chr8g0374941 26.562 448 260 17 9 406 479 907 4.36e-27 114
Msa1098910 MtrunA17_Chr7g0243811 28.329 413 233 17 18 392 1 388 1.13e-28 116
Msa1098910 MtrunA17_Chr8g0369341 24.255 470 314 14 6 440 7 469 1.63e-28 117
Msa1098910 MtrunA17_Chr4g0072761 30.137 219 144 4 226 441 242 454 1.77e-28 117
Msa1098910 MtrunA17_Chr1g0179901 32.381 210 120 3 250 437 282 491 1.93e-28 117
Msa1098910 MtrunA17_Chr5g0442521 21.837 490 300 17 10 439 9 475 2.85e-28 116
Msa1098910 MtrunA17_Chr8g0355221 24.490 490 296 20 8 441 17 488 3.25e-28 116
Msa1098910 MtrunA17_Chr8g0367221 25.983 458 298 17 6 432 12 459 9.31e-28 117
Msa1098910 MtrunA17_Chr8g0367221 26.696 457 297 17 6 432 1288 1736 4.27e-27 115
Msa1098910 MtrunA17_Chr8g0367221 26.066 422 259 16 6 390 798 1203 1.07e-26 114
Msa1098910 MtrunA17_Chr7g0232351 28.021 389 226 14 6 356 6 378 1.30e-27 113
Msa1098910 MtrunA17_Chr4g0029131 25.416 421 282 15 6 406 12 420 1.80e-27 115
Msa1098910 MtrunA17_Chr5g0432731 27.636 275 165 6 188 439 33 296 2.33e-27 110
Msa1098910 MtrunA17_Chr5g0442511 29.098 244 134 9 228 440 259 494 2.74e-27 114
Msa1098910 MtrunA17_Chr8g0350881 33.180 217 120 5 249 440 265 481 2.95e-27 113
Msa1098910 MtrunA17_Chr1g0165701 33.945 218 119 7 245 441 272 485 3.58e-27 113
Msa1098910 MtrunA17_Chr1g0196851 25.635 433 269 17 6 406 49 460 5.33e-27 113
Msa1098910 MtrunA17_Chr7g0241801 25.604 414 266 15 6 406 9 393 7.20e-27 112
Msa1098910 MtrunA17_Chr6g0463851 29.032 217 129 4 249 440 267 483 9.27e-27 112
Msa1098910 MtrunA17_Chr8g0361411 24.070 457 307 14 6 436 8 450 1.41e-26 111
Msa1098910 MtrunA17_Chr8g0370941 32.195 205 106 5 229 402 243 445 1.58e-26 112
Msa1098910 MtrunA17_Chr7g0250021 27.844 334 205 10 6 319 12 329 2.57e-26 108
Msa1098910 MtrunA17_Chr2g0302991 23.579 475 291 16 10 436 9 459 6.29e-26 109
Msa1098910 MtrunA17_Chr4g0029151 25.935 428 271 15 6 406 20 428 2.39e-25 107
Msa1098910 MtrunA17_Chr4g0040711 31.527 203 124 5 228 420 242 439 1.15e-23 102
Msa1098910 MtrunA17_Chr3g0079711 30.108 186 108 6 275 438 2 187 1.56e-23 97.4
Msa1098910 MtrunA17_Chr6g0454231 28.384 229 119 5 217 439 29 218 3.13e-23 101
Msa1098910 MtrunA17_Chr6g0454231 28.302 159 105 4 5 154 249 407 3.56e-14 74.3
Msa1098910 MtrunA17_Chr2g0283041 31.343 201 127 6 252 441 258 458 7.08e-23 100
Msa1098910 MtrunA17_Chr2g0302961 27.586 261 158 8 198 436 211 462 1.01e-22 100
Msa1098910 MtrunA17_Chr2g0278721 25.566 442 271 17 6 406 517 941 4.17e-22 99.8
Msa1098910 MtrunA17_Chr2g0278721 22.844 429 290 15 6 406 15 430 6.17e-18 86.7
Msa1098910 MtrunA17_Chr1g0207881 36.154 130 78 3 316 440 256 385 4.77e-22 97.4
Msa1098910 MtrunA17_Chr4g0040691 32.961 179 110 4 252 420 261 439 8.70e-22 97.4
Msa1098910 MtrunA17_Chr5g0431431 24.821 419 228 12 6 410 10 355 1.37e-21 95.9
Msa1098910 MtrunA17_Chr4g0069611 25.342 438 282 15 6 416 15 434 2.36e-21 96.3
Msa1098910 MtrunA17_Chr5g0427571 27.206 272 159 10 198 440 36 297 3.09e-21 93.6
Msa1098910 MtrunA17_Chr8g0357361 30.653 199 120 6 208 390 65 261 3.51e-21 92.8
Msa1098910 MtrunA17_Chr6g0453941 29.355 310 143 11 4 297 9 258 4.63e-21 92.8
Msa1098910 MtrunA17_Chr2g0319761 26.437 435 279 16 1 408 1 421 6.53e-21 94.7
Msa1098910 MtrunA17_Chr4g0042931 23.431 478 295 15 6 436 7 460 1.99e-20 93.6
Msa1098910 MtrunA17_Chr3g0092031 32.919 161 98 5 252 406 6 162 7.44e-20 87.4
Msa1098910 MtrunA17_Chr4g0042891 27.826 230 143 4 224 436 239 462 1.35e-19 90.9
Msa1098910 MtrunA17_Chr8g0337381 36.134 119 75 1 318 435 3 121 1.87e-19 84.3
Msa1098910 MtrunA17_Chr2g0278741 24.074 432 281 16 6 406 97 512 1.93e-19 90.9
Msa1098910 MtrunA17_Chr5g0416821 23.926 489 288 19 8 441 16 475 2.48e-19 90.1
Msa1098910 MtrunA17_Chr2g0302851 24.883 426 280 16 6 406 16 426 2.05e-18 87.4
Msa1098910 MtrunA17_Chr4g0039881 24.155 414 278 13 16 406 2 402 5.82e-18 85.9
Msa1098910 MtrunA17_Chr6g0453981 29.268 205 123 5 115 297 1 205 8.97e-18 82.4
Msa1098910 MtrunA17_Chr2g0319751 27.097 465 287 22 1 429 478 926 9.64e-18 86.3
Msa1098910 MtrunA17_Chr7g0231631 27.341 267 145 11 208 441 11 261 1.37e-17 82.8
Msa1098910 MtrunA17_Chr2g0319791 24.781 456 308 17 6 435 8 454 1.90e-17 84.3
Msa1098910 MtrunA17_Chr6g0464091 35.616 146 84 5 252 391 279 420 3.32e-17 83.6
Msa1098910 MtrunA17_Chr2g0319731 24.299 428 281 13 6 406 25 436 5.22e-17 83.2
Msa1098910 MtrunA17_Chr6g0466841 30.380 158 106 3 252 406 272 428 8.67e-17 82.4
Msa1098910 MtrunA17_Chr7g0243731 44.000 75 41 1 315 388 6 80 2.14e-16 73.9
Msa1098910 MtrunA17_Chr4g0066141 31.915 141 82 3 315 441 213 353 2.49e-16 80.1
Msa1098910 MtrunA17_Chr5g0426411 30.303 165 105 4 5 160 11 174 2.57e-16 76.6
Msa1098910 MtrunA17_Chr6g0454281 29.448 163 103 4 5 155 9 171 5.05e-16 76.6
Msa1098910 MtrunA17_Chr6g0482061 27.404 208 136 5 224 417 251 457 1.13e-15 79.0
Msa1098910 MtrunA17_Chr6g0466831 28.481 158 109 3 252 406 272 428 8.47e-15 76.3
Msa1098910 MtrunA17_Chr2g0319801 24.537 432 275 17 6 406 8 419 9.39e-15 75.9
Msa1098910 MtrunA17_Chr8g0336271 28.662 157 104 3 6 154 10 166 9.41e-15 74.3
Msa1098910 MtrunA17_Chr2g0321331 30.952 168 96 7 260 412 94 256 2.82e-13 69.7
Msa1098910 MtrunA17_Chr6g0454391 40.580 69 37 1 331 399 11 75 7.16e-12 62.4
Msa1098910 MtrunA17_Chr6g0454111 38.542 96 46 2 210 292 88 183 9.34e-12 63.9
Msa1098910 MtrunA17_Chr8g0334841 34.127 126 73 3 189 307 22 144 1.15e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1098910 AT3G02100.1 40.175 458 245 8 5 441 12 461 9.59e-116 347
Msa1098910 AT1G05675.1 31.868 455 277 10 6 437 6 450 1.35e-72 236
Msa1098910 AT1G05680.1 31.057 454 282 9 6 437 6 450 3.94e-69 226
Msa1098910 AT1G22400.1 31.614 446 256 11 5 410 12 448 3.17e-65 217
Msa1098910 AT1G22370.2 32.688 413 247 9 2 384 9 420 1.79e-64 215
Msa1098910 AT1G22360.1 32.000 450 258 12 6 416 10 450 1.87e-64 215
Msa1098910 AT1G22380.1 31.614 446 255 12 5 410 12 447 3.54e-64 214
Msa1098910 AT1G78270.1 31.519 441 262 11 5 410 12 447 3.07e-63 212
Msa1098910 AT3G46670.1 29.386 456 284 12 8 441 11 450 3.32e-63 211
Msa1098910 AT3G22250.1 29.736 454 265 13 5 421 7 443 4.24e-62 208
Msa1098910 AT1G22360.2 32.775 418 237 11 6 384 10 422 9.62e-62 207
Msa1098910 AT3G46660.1 29.167 456 287 12 8 441 16 457 2.81e-61 206
Msa1098910 AT1G22340.1 29.888 445 265 12 5 410 12 448 6.15e-60 203
Msa1098910 AT5G59590.1 27.455 448 297 11 6 436 10 446 2.35e-58 198
Msa1098910 AT5G59580.1 28.817 465 286 14 1 440 4 448 3.46e-58 198
Msa1098910 AT3G21560.1 28.571 476 289 14 5 441 11 474 2.00e-56 194
Msa1098910 AT2G31750.1 30.283 459 275 12 8 437 10 452 7.77e-56 192
Msa1098910 AT2G31750.2 30.283 459 275 12 8 437 10 452 1.41e-55 192
Msa1098910 AT3G55710.1 31.102 463 274 15 6 439 8 454 3.00e-54 187
Msa1098910 AT3G46680.1 27.778 450 296 12 6 437 9 447 8.99e-53 183
Msa1098910 AT3G46720.1 28.285 449 294 11 6 441 9 442 9.85e-53 183
Msa1098910 AT2G31790.1 28.009 457 298 9 6 439 8 456 2.69e-52 182
Msa1098910 AT2G43840.2 27.623 467 280 13 6 440 7 447 2.29e-51 179
Msa1098910 AT3G11340.1 30.128 468 263 17 5 439 8 444 2.88e-51 179
Msa1098910 AT3G55700.1 29.221 462 280 16 6 439 8 450 4.55e-51 179
Msa1098910 AT4G15500.1 29.122 467 283 16 4 436 7 459 6.56e-51 179
Msa1098910 AT4G15550.1 26.947 475 288 15 5 436 12 470 7.28e-51 179
Msa1098910 AT2G43840.1 27.623 467 280 13 6 440 7 447 8.67e-51 178
Msa1098910 AT5G38010.1 27.766 461 283 13 6 436 10 450 9.23e-51 178
Msa1098910 AT3G46700.1 26.770 452 301 11 6 441 9 446 8.42e-50 175
Msa1098910 AT3G46690.1 27.293 447 300 11 6 436 9 446 1.33e-49 175
Msa1098910 AT3G46650.1 27.640 445 281 14 6 435 10 428 1.35e-49 174
Msa1098910 AT2G43820.1 28.446 457 291 11 6 441 7 448 2.28e-49 174
Msa1098910 AT2G15490.1 29.039 489 271 18 6 436 7 477 2.79e-49 175
Msa1098910 AT5G05880.1 27.451 459 290 13 8 441 10 450 3.17e-49 174
Msa1098910 AT2G15490.3 29.072 485 273 18 6 436 7 474 4.90e-49 174
Msa1098910 AT2G15480.1 28.306 484 278 16 6 436 10 477 7.37e-49 174
Msa1098910 AT5G05900.1 28.448 464 274 14 8 439 10 447 8.94e-49 172
Msa1098910 AT5G38040.1 27.887 459 263 15 15 436 19 446 1.85e-48 172
Msa1098910 AT1G05560.1 27.826 460 289 15 5 436 4 448 4.73e-48 171
Msa1098910 AT4G15490.1 27.253 466 294 16 6 436 8 463 9.08e-48 171
Msa1098910 AT1G05560.2 28.322 459 288 15 5 436 54 498 1.01e-47 171
Msa1098910 AT5G05870.1 28.478 460 280 17 8 436 10 451 2.08e-47 169
Msa1098910 AT2G23250.1 27.991 443 283 13 15 437 7 433 7.67e-47 167
Msa1098910 AT2G15480.2 27.328 494 280 16 6 436 10 487 8.65e-47 168
Msa1098910 AT2G26480.1 26.457 446 287 12 8 431 10 436 1.35e-46 167
Msa1098910 AT5G05860.1 28.285 449 285 12 8 435 11 443 1.38e-46 167
Msa1098910 AT2G36970.1 27.719 469 300 12 5 440 9 471 2.70e-46 167
Msa1098910 AT1G01420.1 29.888 445 276 12 2 417 4 441 5.56e-46 166
Msa1098910 AT1G01420.2 29.888 445 276 12 2 417 7 444 7.27e-46 166
Msa1098910 AT4G15480.1 27.137 468 293 16 6 436 19 475 9.71e-46 166
Msa1098910 AT4G14090.1 26.889 450 302 13 5 436 12 452 9.89e-46 165
Msa1098910 AT2G23260.1 25.221 452 308 8 6 437 10 451 1.23e-45 164
Msa1098910 AT4G01070.1 27.828 442 284 10 5 417 7 442 1.41e-44 162
Msa1098910 AT5G05890.1 26.535 456 302 12 8 441 10 454 6.79e-44 160
Msa1098910 AT2G36800.1 27.893 484 277 19 6 432 12 480 1.19e-43 160
Msa1098910 AT4G34131.1 27.329 483 283 15 6 436 10 476 3.16e-43 158
Msa1098910 AT2G28080.1 27.922 462 283 19 10 436 22 468 3.71e-43 158
Msa1098910 AT3G53160.1 27.016 496 273 18 6 436 8 479 5.34e-43 158
Msa1098910 AT1G22370.1 37.500 232 121 5 172 384 24 250 7.56e-43 153
Msa1098910 AT1G05530.1 26.940 464 297 15 5 439 4 454 3.65e-42 155
Msa1098910 AT2G36770.1 26.132 486 290 18 6 436 14 485 8.37e-42 155
Msa1098910 AT2G30140.1 27.489 462 284 14 6 439 13 451 1.57e-41 153
Msa1098910 AT2G36780.1 26.458 480 288 15 6 432 14 481 1.05e-40 152
Msa1098910 AT4G34138.1 26.789 489 276 18 6 436 11 475 1.35e-40 151
Msa1098910 AT2G36750.1 27.406 478 285 16 6 432 10 476 3.35e-40 150
Msa1098910 AT2G30140.2 27.813 471 270 16 6 439 13 450 5.17e-40 149
Msa1098910 AT2G30150.2 27.171 449 258 15 6 427 13 419 2.32e-39 147
Msa1098910 AT3G16520.3 26.446 363 246 8 91 436 98 456 4.28e-39 147
Msa1098910 AT4G34135.1 25.519 482 294 14 6 436 11 478 4.33e-39 147
Msa1098910 AT3G16520.2 27.193 342 228 8 91 415 98 435 5.58e-39 146
Msa1098910 AT3G16520.1 27.193 342 228 8 91 415 98 435 6.37e-39 146
Msa1098910 AT5G66690.1 28.289 456 263 16 5 417 6 440 9.97e-39 146
Msa1098910 AT2G30150.1 27.191 445 255 15 10 427 1 403 1.90e-38 144
Msa1098910 AT5G26310.1 26.518 494 279 18 5 439 6 474 2.61e-38 145
Msa1098910 AT1G01390.1 28.090 445 279 12 5 417 7 442 4.70e-38 144
Msa1098910 AT2G16890.2 26.237 465 285 13 6 429 9 456 5.05e-38 144
Msa1098910 AT1G01390.2 28.090 445 279 12 5 417 24 459 6.10e-38 144
Msa1098910 AT2G36790.1 26.195 481 288 15 6 432 13 480 8.86e-37 141
Msa1098910 AT2G16890.3 26.328 433 264 12 6 400 9 424 9.14e-37 140
Msa1098910 AT3G50740.1 27.586 464 263 15 5 417 6 447 2.07e-36 140
Msa1098910 AT3G21790.1 24.217 479 314 11 6 439 4 478 3.20e-36 139
Msa1098910 AT1G24100.1 25.786 477 282 15 6 439 11 458 8.15e-36 137
Msa1098910 AT2G29750.1 24.573 468 311 10 6 436 8 470 8.59e-36 138
Msa1098910 AT3G53150.1 26.573 429 239 12 6 381 22 427 2.55e-35 137
Msa1098910 AT2G36760.1 32.432 259 139 8 208 432 225 481 4.09e-35 136
Msa1098910 AT3G21750.1 22.594 478 313 13 6 439 4 468 3.10e-34 134
Msa1098910 AT1G73880.1 27.215 474 284 15 6 439 14 466 4.84e-34 133
Msa1098910 AT5G14860.1 26.596 470 271 16 6 427 8 451 5.08e-34 133
Msa1098910 AT2G29740.1 26.316 475 295 15 6 436 8 471 5.47e-34 133
Msa1098910 AT1G07250.1 25.527 474 302 13 6 437 6 470 6.12e-34 133
Msa1098910 AT5G49690.1 25.216 464 296 16 6 438 10 453 3.14e-33 130
Msa1098910 AT3G21800.1 21.414 481 319 11 7 439 6 475 5.31e-33 130
Msa1098910 AT4G15260.1 24.225 355 228 9 119 439 7 354 5.35e-33 128
Msa1098910 AT3G21760.1 24.324 481 313 11 6 439 4 480 9.77e-33 129
Msa1098910 AT5G17050.1 24.781 456 310 13 6 439 12 456 1.09e-32 129
Msa1098910 AT3G21780.1 23.256 473 316 12 6 439 4 468 2.35e-31 125
Msa1098910 AT1G07260.1 24.043 470 311 12 6 436 6 468 1.78e-30 123
Msa1098910 AT5G65550.1 24.711 433 283 14 6 408 9 428 1.92e-30 123
Msa1098910 AT2G29710.1 31.048 248 149 7 208 436 215 459 1.93e-30 123
Msa1098910 AT2G29730.1 22.930 471 307 16 6 436 5 459 3.56e-30 122
Msa1098910 AT4G15280.1 21.639 476 325 11 6 439 4 473 3.85e-30 122
Msa1098910 AT4G15280.2 21.639 476 325 11 6 439 36 505 5.23e-30 122
Msa1098910 AT1G30530.1 23.678 435 311 9 12 435 19 443 6.12e-30 121
Msa1098910 AT1G10400.1 24.842 475 293 16 6 437 7 460 1.37e-29 120
Msa1098910 AT4G36770.1 27.848 474 266 21 6 430 4 450 1.78e-29 120
Msa1098910 AT2G18560.1 32.843 204 115 6 228 415 150 347 2.77e-29 118
Msa1098910 AT5G17040.2 31.282 195 128 3 225 417 122 312 3.07e-29 117
Msa1098910 AT5G37950.1 26.271 354 232 10 21 356 1 343 4.72e-29 117
Msa1098910 AT5G17040.1 31.282 195 128 3 225 417 224 414 7.93e-29 118
Msa1098910 AT2G18570.1 24.289 457 277 16 5 415 4 437 1.55e-28 117
Msa1098910 AT5G12890.1 23.077 481 308 14 6 436 10 478 2.72e-28 117
Msa1098910 AT5G37950.2 26.000 350 232 9 21 356 1 337 3.39e-28 114
Msa1098910 AT5G17030.1 30.918 207 132 4 225 429 240 437 5.84e-28 115
Msa1098910 AT5G54010.1 25.352 426 281 12 1 406 1 409 1.25e-27 114
Msa1098910 AT5G53990.1 25.333 450 278 18 1 420 1 422 1.34e-26 111
Msa1098910 AT4G27570.1 25.943 424 268 14 6 405 7 408 4.11e-26 110
Msa1098910 AT1G51210.1 25.500 400 238 11 5 373 19 389 4.46e-26 110
Msa1098910 AT1G50580.1 26.386 451 273 17 1 420 1 423 3.18e-25 107
Msa1098910 AT1G64910.1 25.785 446 283 20 1 421 1 423 3.70e-25 107
Msa1098910 AT4G27560.1 25.000 428 275 15 2 405 3 408 4.63e-25 107
Msa1098910 AT5G03490.1 28.774 212 144 4 229 436 251 459 7.27e-25 107
Msa1098910 AT1G07240.1 21.822 472 322 13 7 436 6 472 1.52e-24 106
Msa1098910 AT1G06000.1 24.689 482 255 18 5 437 9 431 1.65e-23 102
Msa1098910 AT1G64920.1 24.943 437 267 17 1 406 1 407 1.81e-23 102
Msa1098910 AT2G22930.1 23.684 418 282 11 6 406 6 403 2.55e-23 102
Msa1098910 AT2G22590.1 23.756 442 304 15 2 417 11 445 2.73e-23 102
Msa1098910 AT3G29630.1 26.424 439 290 16 1 420 1 425 1.03e-21 97.4
Msa1098910 AT4G09500.1 29.050 179 117 4 252 420 219 397 5.68e-21 95.1
Msa1098910 AT4G09500.2 29.050 179 117 4 252 420 244 422 6.77e-21 95.1
Msa1098910 AT3G29630.2 29.834 181 116 5 251 420 219 399 1.71e-20 93.6
Msa1098910 AT4G01070.2 27.532 316 209 9 5 307 7 315 5.80e-19 88.2
Msa1098910 AT5G54060.1 25.814 430 264 18 8 402 15 424 3.40e-18 87.0
Msa1098910 AT4G34135.2 22.054 331 207 9 6 298 11 328 7.31e-13 69.7
Msa1098910 AT2G23210.1 23.509 285 173 11 6 265 10 274 5.54e-11 63.5

Find 106 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGAAGTGGGACACAATT+TGG 0.153736 7_3:-27015274 Msa1098910:CDS
CACCAGCTTTCGATCGTTTA+TGG 0.153886 7_3:+27015499 None:intergenic
GATTGTTGCTACATTTAATA+TGG 0.167038 7_3:-27015304 Msa1098910:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7_3:+27013511 None:intergenic
GAGATACAAACTATAAAATT+TGG 0.240169 7_3:-27013747 Msa1098910:CDS
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7_3:+27013674 None:intergenic
TAACACAACTAATAAACTTT+TGG 0.269673 7_3:+27013040 None:intergenic
ACAACAACAAAAGTTCATTT+TGG 0.269702 7_3:-27013629 Msa1098910:CDS
AGAAACTGATCAACTGAAAA+TGG 0.274470 7_3:+27013261 None:intergenic
ATATGTTTCCTTTGGTAGTA+TGG 0.280834 7_3:-27013550 Msa1098910:CDS
ATATCACTTCTATCATCTTC+AGG 0.296209 7_3:+27015426 None:intergenic
GTGTCTATCATAGGTATATC+AGG 0.310349 7_3:+27013825 None:intergenic
TTACTTCCATGGAAATCATT+TGG 0.311022 7_3:+27013414 None:intergenic
ATTTAATATGGGTTGGGCTT+TGG 0.340556 7_3:-27015292 Msa1098910:CDS
TGCTACATTTAATATGGGTT+GGG 0.342148 7_3:-27015298 Msa1098910:CDS
AAATTTGTTGTGTCTATCAT+AGG 0.354442 7_3:+27013816 None:intergenic
ACCAACATGTACACCTTCTA+TGG 0.354994 7_3:+27013302 None:intergenic
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7_3:+27013517 None:intergenic
AGTGACCTTGCAACCATGTT+TGG 0.359865 7_3:+27015542 None:intergenic
TTGGAAGTGGGACACAATTT+GGG 0.363607 7_3:-27015273 Msa1098910:CDS
AAGATACAACTTGCTTAGAT+TGG 0.363758 7_3:-27013602 Msa1098910:CDS
TTAACATCTTCTATAAGCTT+TGG 0.364725 7_3:+27015357 None:intergenic
TACTTCCATGGAAATCATTT+GGG 0.367161 7_3:+27013415 None:intergenic
ACATGTCCTTGAACTGGATA+TGG 0.367225 7_3:+27015597 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.375277 7_3:-27013658 Msa1098910:CDS
GAAAATGGCCAACACAATAA+AGG 0.384419 7_3:+27013276 None:intergenic
TTGCTACATTTAATATGGGT+TGG 0.394148 7_3:-27015299 Msa1098910:CDS
TCTTCAGGCTCCAAACCATC+TGG 0.398364 7_3:+27015441 None:intergenic
TCGTCCTAGTAATGACAATA+AGG 0.399447 7_3:-27013451 Msa1098910:CDS
TAAAGGTAAAATTGTTGGTT+GGG 0.403052 7_3:-27013394 Msa1098910:CDS
GAATTAGAGAAAGATGATAA+TGG 0.405064 7_3:-27013198 Msa1098910:CDS
AGTTGGTGATGATGATATAA+AGG 0.407151 7_3:-27013133 Msa1098910:CDS
TCCAGCTTCTGCCACTACTT+TGG 0.407318 7_3:-27015229 Msa1098910:CDS
ATTTGTGATGTGTGGAAGAC+TGG 0.417376 7_3:-27013225 Msa1098910:CDS
ATCCCATCCTCAATAAGTTT+AGG 0.417721 7_3:+27015189 None:intergenic
CTTTGGTAGTATGGTAGTAA+TGG 0.420468 7_3:-27013541 Msa1098910:CDS
TCTGTCATATATGTTTCCTT+TGG 0.423583 7_3:-27013558 Msa1098910:CDS
GGTGACACTCCCAGATGGTT+TGG 0.431583 7_3:-27015451 Msa1098910:CDS
ATCTTATCTACGCCGCGCCA+TGG 0.433882 7_3:+27013792 None:intergenic
TGTCTAGAAGCTCAAGTCCT+AGG 0.436501 7_3:+27013493 None:intergenic
TATGGGTTGGGCTTTGGAAG+TGG 0.440483 7_3:-27015286 Msa1098910:CDS
GTTATACCATATCCAGTTCA+AGG 0.444945 7_3:-27015603 Msa1098910:CDS
GGAAGTAAAGGTAAAATTGT+TGG 0.450567 7_3:-27013399 Msa1098910:CDS
CTTGCCATCAATGGACCAAT+TGG 0.451649 7_3:+27013654 None:intergenic
GGGTTAACATGTCCTTGAAC+TGG 0.455156 7_3:+27015591 None:intergenic
GGATGGAATTCTACCATAGA+AGG 0.456157 7_3:-27013315 Msa1098910:CDS
AACTTGTGAGAATTGCATAA+GGG 0.457199 7_3:+27015569 None:intergenic
GGACCAATTGGTAGGAACTT+TGG 0.458930 7_3:+27013666 None:intergenic
TTGTTGTTACTTGCCATCAA+TGG 0.465689 7_3:+27013645 None:intergenic
TCACCAAAGTTCCTACCAAT+TGG 0.467404 7_3:-27013669 Msa1098910:CDS
GCCAAAGTAGTGGCAGAAGC+TGG 0.470607 7_3:+27015228 None:intergenic
AATGATTTCCATGGAAGTAA+AGG 0.480314 7_3:-27013411 Msa1098910:CDS
TTGGTGTACCTTTATTGTGT+TGG 0.480614 7_3:-27013284 Msa1098910:CDS
ATGTTGACAACAATATCAAA+TGG 0.484231 7_3:-27015326 Msa1098910:CDS
TCTATAAGCTTTGGAAGTCT+AGG 0.486772 7_3:+27015366 None:intergenic
CACTTGTATCTTGTCTTGCT+CGG 0.488719 7_3:+27015473 None:intergenic
CTGCATACCTAAACTTATTG+AGG 0.492483 7_3:-27015196 Msa1098910:CDS
TTTACCTTATTGTCATTACT+AGG 0.497913 7_3:+27013447 None:intergenic
ATGGGTTGGGCTTTGGAAGT+GGG 0.498017 7_3:-27015285 Msa1098910:CDS
GTAAAGGTAAAATTGTTGGT+TGG 0.498069 7_3:-27013395 Msa1098910:CDS
ATCATTAGTAATATAGAAGA+AGG 0.499924 7_3:-27013084 Msa1098910:CDS
GAACTTGTGAGAATTGCATA+AGG 0.502829 7_3:+27015568 None:intergenic
GGACACAATTTGGGAATCAA+AGG 0.510394 7_3:-27015264 Msa1098910:CDS
GGACGAACAACCCAAAGAAA+AGG 0.516602 7_3:+27013468 None:intergenic
ATTGTTGCTACATTTAATAT+GGG 0.520303 7_3:-27015303 Msa1098910:CDS
ATACCTAAACTTATTGAGGA+TGG 0.526185 7_3:-27015192 Msa1098910:CDS
TACCTAAACTTATTGAGGAT+GGG 0.526302 7_3:-27015191 Msa1098910:CDS
GCATACCCAAATGATTTCCA+TGG 0.529645 7_3:-27013420 Msa1098910:CDS
AAGAAGGTGGATCAACTAGT+TGG 0.531619 7_3:-27013150 Msa1098910:CDS
AACCATAAACGATCGAAAGC+TGG 0.531790 7_3:-27015501 Msa1098910:CDS
GAAACATATATGACAGATTG+AGG 0.532322 7_3:+27013564 None:intergenic
GTCTAGAAGCTCAAGTCCTA+GGG 0.544665 7_3:+27013494 None:intergenic
GATGGGATTATTGATTCTGC+AGG 0.547238 7_3:-27015174 Msa1098910:intron
CTTCAGGCTCCAAACCATCT+GGG 0.548351 7_3:+27015442 None:intergenic
GCTTCATAAGTCATTGTGGA+TGG 0.554894 7_3:-27013332 Msa1098910:CDS
AAGGCAAGAGATAAAGAAGA+AGG 0.556338 7_3:-27013166 Msa1098910:CDS
GACACAATTTGGGAATCAAA+GGG 0.557360 7_3:-27015263 Msa1098910:CDS
ACCATAGAAGGTGTACATGT+TGG 0.563384 7_3:-27013303 Msa1098910:CDS
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7_3:-27013705 Msa1098910:CDS
TGTCTATCATAGGTATATCA+GGG 0.572365 7_3:+27013826 None:intergenic
AAACTATAAAATTTGGAGAA+CGG 0.590817 7_3:-27013740 Msa1098910:CDS
CTTTGGAAGTCTAGGAGGCA+TGG 0.591674 7_3:+27015374 None:intergenic
CAATTTAATGAACTAGCCCT+AGG 0.592472 7_3:-27013510 Msa1098910:CDS
GACAGCACAAGCCAAAGTAG+TGG 0.593369 7_3:+27015218 None:intergenic
CATTACTACCATACTACCAA+AGG 0.593449 7_3:+27013542 None:intergenic
TATGGTATAACAAGAAAATG+TGG 0.598798 7_3:+27015615 None:intergenic
AATCGTATATTTGTGATGTG+TGG 0.599221 7_3:-27013233 Msa1098910:CDS
GCAAGAGATAAAGAAGAAGG+TGG 0.602358 7_3:-27013163 Msa1098910:CDS
ATAAGCTTTGGAAGTCTAGG+AGG 0.602780 7_3:+27015369 None:intergenic
CTTATGAAGCAAGCAATCGC+GGG 0.607846 7_3:+27013345 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.610498 7_3:+27013658 None:intergenic
ACTTGTGAGAATTGCATAAG+GGG 0.611094 7_3:+27015570 None:intergenic
ACTTATGAAGCAAGCAATCG+CGG 0.612989 7_3:+27013344 None:intergenic
TCACAAGTTCTAGCCAAACA+TGG 0.613083 7_3:-27015555 Msa1098910:CDS
TGAAGCAAGCAATCGCGGGA+TGG 0.615584 7_3:+27013349 None:intergenic
GCTTGCTTCATAAGTCATTG+TGG 0.617234 7_3:-27013336 Msa1098910:CDS
TCTAGCCAAACATGGTTGCA+AGG 0.620565 7_3:-27015547 Msa1098910:CDS
GGTGATATGGAAAATACACC+AGG 0.626519 7_3:+27013687 None:intergenic
CTATAAAATTTGGAGAACGG+TGG 0.627773 7_3:-27013737 Msa1098910:CDS
CGAGCAAGACAAGATACAAG+TGG 0.649951 7_3:-27015472 Msa1098910:CDS
CTTGTGAGAATTGCATAAGG+GGG 0.662045 7_3:+27015571 None:intergenic
CAAGTGGTGACACTCCCAGA+TGG 0.666396 7_3:-27015456 Msa1098910:CDS
ACACAATTTGGGAATCAAAG+GGG 0.672957 7_3:-27015262 Msa1098910:CDS
ACAACAAATTTCCCATGGCG+CGG 0.675013 7_3:-27013804 Msa1098910:CDS
GTCTATCATAGGTATATCAG+GGG 0.680090 7_3:+27013827 None:intergenic
TAGACACAACAAATTTCCCA+TGG 0.689856 7_3:-27013809 Msa1098910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTCACAAATAAATTTTT+TGG - chr7_3:27013535-27013554 Msa1098910:CDS 10.0%
!!! ATTTTACTTTATTTTAGTAT+TGG - chr7_3:27013654-27013673 Msa1098910:CDS 10.0%
!! CATTTCATATTTCATAAATA+AGG + chr7_3:27013631-27013650 None:intergenic 15.0%
!!! AATGTTGTTCAATAAAATTT+TGG - chr7_3:27013952-27013971 Msa1098910:intron 15.0%
!!! ATGTTGTTCAATAAAATTTT+GGG - chr7_3:27013953-27013972 Msa1098910:intron 15.0%
!! AAACAGAAAATTACTAAAAT+TGG - chr7_3:27014523-27014542 Msa1098910:intron 15.0%
!! AACAGAAAATTACTAAAATT+GGG - chr7_3:27014524-27014543 Msa1098910:intron 15.0%
!! AAATACTATAGAAAATACTA+TGG - chr7_3:27014556-27014575 Msa1098910:intron 15.0%
!! TAAACACAAATCATAAATAA+TGG + chr7_3:27014687-27014706 None:intergenic 15.0%
!! ATTGTTGCTACATTTAATAT+GGG - chr7_3:27013356-27013375 Msa1098910:CDS 20.0%
!! AATGAATAAAAGTTTCTCTT+AGG - chr7_3:27014432-27014451 Msa1098910:intron 20.0%
!!! TTGTTTCAGTTTGTTATTTT+CGG + chr7_3:27014504-27014523 None:intergenic 20.0%
!! AACTACAACTATTGTTTAAT+AGG - chr7_3:27014623-27014642 Msa1098910:intron 20.0%
!!! AAATCATAAATAATGGAACA+CGG + chr7_3:27014680-27014699 None:intergenic 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG + chr7_3:27014811-27014830 None:intergenic 20.0%
!! GAGATACAAACTATAAAATT+TGG - chr7_3:27014912-27014931 Msa1098910:intron 20.0%
!! AAACTATAAAATTTGGAGAA+CGG - chr7_3:27014919-27014938 Msa1098910:intron 20.0%
!!! ATGATAATGGTTTTATATCA+AGG - chr7_3:27015474-27015493 Msa1098910:CDS 20.0%
!! ATCATTAGTAATATAGAAGA+AGG - chr7_3:27015575-27015594 Msa1098910:CDS 20.0%
!!! TAACACAACTAATAAACTTT+TGG + chr7_3:27015622-27015641 None:intergenic 20.0%
! TATGGTATAACAAGAAAATG+TGG + chr7_3:27013047-27013066 None:intergenic 25.0%
! TTAACATCTTCTATAAGCTT+TGG + chr7_3:27013305-27013324 None:intergenic 25.0%
! ATGTTGACAACAATATCAAA+TGG - chr7_3:27013333-27013352 Msa1098910:CDS 25.0%
! GATTGTTGCTACATTTAATA+TGG - chr7_3:27013355-27013374 Msa1098910:CDS 25.0%
!! TTTGGAATAGAATTCCATAA+AGG - chr7_3:27013553-27013572 Msa1098910:CDS 25.0%
! TGAACAATAAACTACCTTTA+TGG + chr7_3:27013570-27013589 None:intergenic 25.0%
! AAGGAAAGTTCATACAATTA+TGG + chr7_3:27013612-27013631 None:intergenic 25.0%
!! TTTTCCCTCAAAAAAAAGTA+TGG - chr7_3:27013683-27013702 Msa1098910:CDS 25.0%
!! TTTCCCTCAAAAAAAAGTAT+GGG - chr7_3:27013684-27013703 Msa1098910:CDS 25.0%
!!! TTTCCCATACTTTTTTTTGA+GGG + chr7_3:27013690-27013709 None:intergenic 25.0%
!!! TTTTCCCATACTTTTTTTTG+AGG + chr7_3:27013691-27013710 None:intergenic 25.0%
!!! CATTCTGCTTTTTTTTTTTG+TGG + chr7_3:27013936-27013955 None:intergenic 25.0%
!!! TGGCTTGTTCAATAAAATTT+TGG - chr7_3:27014045-27014064 Msa1098910:intron 25.0%
!!! GGCTTGTTCAATAAAATTTT+GGG - chr7_3:27014046-27014065 Msa1098910:intron 25.0%
!! ATATACTTTTGAACCAGAAT+GGG + chr7_3:27014249-27014268 None:intergenic 25.0%
!! AATATACTTTTGAACCAGAA+TGG + chr7_3:27014250-27014269 None:intergenic 25.0%
!! TAGAGAGTTTTCTTAATTTC+TGG + chr7_3:27014401-27014420 None:intergenic 25.0%
! TATATTACTTGAGTGAATGA+AGG + chr7_3:27014598-27014617 None:intergenic 25.0%
!!! TGAATTTCTTGTTTTTTGGT+GGG + chr7_3:27014807-27014826 None:intergenic 25.0%
!!! TTGAATTTCTTGTTTTTTGG+TGG + chr7_3:27014808-27014827 None:intergenic 25.0%
!!! AAATTTGTTGTGTCTATCAT+AGG + chr7_3:27014846-27014865 None:intergenic 25.0%
!! ACAACAACAAAAGTTCATTT+TGG - chr7_3:27015030-27015049 Msa1098910:intron 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG + chr7_3:27015145-27015164 None:intergenic 25.0%
! TTTACCTTATTGTCATTACT+AGG + chr7_3:27015215-27015234 None:intergenic 25.0%
!! TAAAGGTAAAATTGTTGGTT+GGG - chr7_3:27015265-27015284 Msa1098910:CDS 25.0%
! GAATTAGAGAAAGATGATAA+TGG - chr7_3:27015461-27015480 Msa1098910:CDS 25.0%
AACTTGTGAGAATTGCATAA+GGG + chr7_3:27013093-27013112 None:intergenic 30.0%
ATATCACTTCTATCATCTTC+AGG + chr7_3:27013236-27013255 None:intergenic 30.0%
TTGCTACATTTAATATGGGT+TGG - chr7_3:27013360-27013379 Msa1098910:CDS 30.0%
TGCTACATTTAATATGGGTT+GGG - chr7_3:27013361-27013380 Msa1098910:CDS 30.0%
ATACCTAAACTTATTGAGGA+TGG - chr7_3:27013467-27013486 Msa1098910:CDS 30.0%
TACCTAAACTTATTGAGGAT+GGG - chr7_3:27013468-27013487 Msa1098910:CDS 30.0%
ATGTAACAACATTCTGCTTT+AGG + chr7_3:27013828-27013847 None:intergenic 30.0%
!!! TTTTTTTTTTTGTGGTGTCC+GGG + chr7_3:27013928-27013947 None:intergenic 30.0%
!!! CTTTTTTTTTTTGTGGTGTC+CGG + chr7_3:27013929-27013948 None:intergenic 30.0%
!! ATTTTGGGAATCAGATCAAA+TGG - chr7_3:27013968-27013987 Msa1098910:intron 30.0%
CATCATCTTAGTTTATAGCT+TGG - chr7_3:27014025-27014044 Msa1098910:intron 30.0%
!! ATTTTGGGAATCAGATCAAA+TGG - chr7_3:27013968-27013987 Msa1098910:intron 30.0%
CATCATCTTAGTTTATAGCT+TGG - chr7_3:27014025-27014044 Msa1098910:intron 30.0%
ATGATTGATAGACATAGAAG+AGG - chr7_3:27014184-27014203 Msa1098910:intron 30.0%
TGATTGATAGACATAGAAGA+GGG - chr7_3:27014185-27014204 Msa1098910:intron 30.0%
! TATACTTTTGAACCAGAATG+GGG + chr7_3:27014248-27014267 None:intergenic 30.0%
ACTATATATATTGACGCAGT+CGG - chr7_3:27014288-27014307 Msa1098910:intron 30.0%
!! AGAGTTTTCTTAATTTCTGG+TGG + chr7_3:27014398-27014417 None:intergenic 30.0%
!!! TTGTTATTTTCGGTCCATTA+GGG + chr7_3:27014494-27014513 None:intergenic 30.0%
!!! TTTGTTATTTTCGGTCCATT+AGG + chr7_3:27014495-27014514 None:intergenic 30.0%
TGTCTATCATAGGTATATCA+GGG + chr7_3:27014836-27014855 None:intergenic 30.0%
! AAGATACAACTTGCTTAGAT+TGG - chr7_3:27015057-27015076 Msa1098910:intron 30.0%
GAAACATATATGACAGATTG+AGG + chr7_3:27015098-27015117 None:intergenic 30.0%
TCTGTCATATATGTTTCCTT+TGG - chr7_3:27015101-27015120 Msa1098910:intron 30.0%
! ATATGTTTCCTTTGGTAGTA+TGG - chr7_3:27015109-27015128 Msa1098910:intron 30.0%
TACTTCCATGGAAATCATTT+GGG + chr7_3:27015247-27015266 None:intergenic 30.0%
TTACTTCCATGGAAATCATT+TGG + chr7_3:27015248-27015267 None:intergenic 30.0%
AATGATTTCCATGGAAGTAA+AGG - chr7_3:27015248-27015267 Msa1098910:CDS 30.0%
! CAATTTTACCTTTACTTCCA+TGG + chr7_3:27015259-27015278 None:intergenic 30.0%
GGAAGTAAAGGTAAAATTGT+TGG - chr7_3:27015260-27015279 Msa1098910:CDS 30.0%
GTAAAGGTAAAATTGTTGGT+TGG - chr7_3:27015264-27015283 Msa1098910:CDS 30.0%
! TGGTTCAAGATTTTACTTTG+TGG + chr7_3:27015293-27015312 None:intergenic 30.0%
AGAAACTGATCAACTGAAAA+TGG + chr7_3:27015401-27015420 None:intergenic 30.0%
AATCGTATATTTGTGATGTG+TGG - chr7_3:27015426-27015445 Msa1098910:CDS 30.0%
!! AGTTGGTGATGATGATATAA+AGG - chr7_3:27015526-27015545 Msa1098910:CDS 30.0%
GTTATACCATATCCAGTTCA+AGG - chr7_3:27013056-27013075 Msa1098910:CDS 35.0%
ACTTGTGAGAATTGCATAAG+GGG + chr7_3:27013092-27013111 None:intergenic 35.0%
GAACTTGTGAGAATTGCATA+AGG + chr7_3:27013094-27013113 None:intergenic 35.0%
!! TCTATAAGCTTTGGAAGTCT+AGG + chr7_3:27013296-27013315 None:intergenic 35.0%
!! ATTTAATATGGGTTGGGCTT+TGG - chr7_3:27013367-27013386 Msa1098910:CDS 35.0%
GACACAATTTGGGAATCAAA+GGG - chr7_3:27013396-27013415 Msa1098910:CDS 35.0%
ACACAATTTGGGAATCAAAG+GGG - chr7_3:27013397-27013416 Msa1098910:CDS 35.0%
CTGCATACCTAAACTTATTG+AGG - chr7_3:27013463-27013482 Msa1098910:CDS 35.0%
ATCCCATCCTCAATAAGTTT+AGG + chr7_3:27013473-27013492 None:intergenic 35.0%
!! AACATTCTGCTTTAGGATTG+AGG + chr7_3:27013821-27013840 None:intergenic 35.0%
CATAATATATGCAAAGTCCG+AGG - chr7_3:27013895-27013914 Msa1098910:intron 35.0%
AGCGACAAACTTGTGAAAAT+AGG - chr7_3:27014362-27014381 Msa1098910:intron 35.0%
GCGACAAACTTGTGAAAATA+GGG - chr7_3:27014363-27014382 Msa1098910:intron 35.0%
AACTTGTGAAAATAGGGTTC+CGG - chr7_3:27014369-27014388 Msa1098910:intron 35.0%
!! TCTTAATTTCTGGTGGATTC+CGG + chr7_3:27014391-27014410 None:intergenic 35.0%
TGCAACTCTTAAGCTTAAAC+AGG - chr7_3:27014456-27014475 Msa1098910:intron 35.0%
GCAACTCTTAAGCTTAAACA+GGG - chr7_3:27014457-27014476 Msa1098910:intron 35.0%
GGGAAATAACAAAACCCTAA+TGG - chr7_3:27014477-27014496 Msa1098910:intron 35.0%
TGAGTGAATGAAGGTTTACA+AGG + chr7_3:27014589-27014608 None:intergenic 35.0%
GTCTATCATAGGTATATCAG+GGG + chr7_3:27014835-27014854 None:intergenic 35.0%
GTGTCTATCATAGGTATATC+AGG + chr7_3:27014837-27014856 None:intergenic 35.0%
TAGACACAACAAATTTCCCA+TGG - chr7_3:27014850-27014869 Msa1098910:intron 35.0%
CTATAAAATTTGGAGAACGG+TGG - chr7_3:27014922-27014941 Msa1098910:intron 35.0%
! TTGTTGTTACTTGCCATCAA+TGG + chr7_3:27015017-27015036 None:intergenic 35.0%
CATTACTACCATACTACCAA+AGG + chr7_3:27015120-27015139 None:intergenic 35.0%
! CTTTGGTAGTATGGTAGTAA+TGG - chr7_3:27015118-27015137 Msa1098910:intron 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG + chr7_3:27015151-27015170 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG - chr7_3:27015149-27015168 Msa1098910:intron 35.0%
! TTCTAGACAAGCCTTTTCTT+TGG - chr7_3:27015180-27015199 Msa1098910:CDS 35.0%
! TCTAGACAAGCCTTTTCTTT+GGG - chr7_3:27015181-27015200 Msa1098910:CDS 35.0%
TCGTCCTAGTAATGACAATA+AGG - chr7_3:27015208-27015227 Msa1098910:CDS 35.0%
TTGGTGTACCTTTATTGTGT+TGG - chr7_3:27015375-27015394 Msa1098910:CDS 35.0%
GAAAATGGCCAACACAATAA+AGG + chr7_3:27015386-27015405 None:intergenic 35.0%
AAGGCAAGAGATAAAGAAGA+AGG - chr7_3:27015493-27015512 Msa1098910:CDS 35.0%
ACATGTCCTTGAACTGGATA+TGG + chr7_3:27013065-27013084 None:intergenic 40.0%
CTTGTGAGAATTGCATAAGG+GGG + chr7_3:27013091-27013110 None:intergenic 40.0%
! TCACAAGTTCTAGCCAAACA+TGG - chr7_3:27013104-27013123 Msa1098910:CDS 40.0%
AACCATAAACGATCGAAAGC+TGG - chr7_3:27013158-27013177 Msa1098910:CDS 40.0%
CACTTGTATCTTGTCTTGCT+CGG + chr7_3:27013189-27013208 None:intergenic 40.0%
!! ATAAGCTTTGGAAGTCTAGG+AGG + chr7_3:27013293-27013312 None:intergenic 40.0%
TTTGGAAGTGGGACACAATT+TGG - chr7_3:27013385-27013404 Msa1098910:CDS 40.0%
TTGGAAGTGGGACACAATTT+GGG - chr7_3:27013386-27013405 Msa1098910:CDS 40.0%
GGACACAATTTGGGAATCAA+AGG - chr7_3:27013395-27013414 Msa1098910:CDS 40.0%
!! GATGGGATTATTGATTCTGC+AGG - chr7_3:27013485-27013504 Msa1098910:CDS 40.0%
TGATAGACATAGAAGAGGGA+AGG - chr7_3:27014189-27014208 Msa1098910:intron 40.0%
GATAGACATAGAAGAGGGAA+GGG - chr7_3:27014190-27014209 Msa1098910:intron 40.0%
ATAGACATAGAAGAGGGAAG+GGG - chr7_3:27014191-27014210 Msa1098910:intron 40.0%
GGTGATATGGAAAATACACC+AGG + chr7_3:27014975-27014994 None:intergenic 40.0%
! TGGTAGGAACTTTGGTGATA+TGG + chr7_3:27014988-27015007 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG - chr7_3:27014990-27015009 Msa1098910:intron 40.0%
GCATACCCAAATGATTTCCA+TGG - chr7_3:27015239-27015258 Msa1098910:CDS 40.0%
ACTTATGAAGCAAGCAATCG+CGG + chr7_3:27015318-27015337 None:intergenic 40.0%
GCTTGCTTCATAAGTCATTG+TGG - chr7_3:27015323-27015342 Msa1098910:CDS 40.0%
GCTTCATAAGTCATTGTGGA+TGG - chr7_3:27015327-27015346 Msa1098910:CDS 40.0%
GGATGGAATTCTACCATAGA+AGG - chr7_3:27015344-27015363 Msa1098910:CDS 40.0%
! ACCATAGAAGGTGTACATGT+TGG - chr7_3:27015356-27015375 Msa1098910:CDS 40.0%
ACCAACATGTACACCTTCTA+TGG + chr7_3:27015360-27015379 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGAC+TGG - chr7_3:27015434-27015453 Msa1098910:CDS 40.0%
GCAAGAGATAAAGAAGAAGG+TGG - chr7_3:27015496-27015515 Msa1098910:CDS 40.0%
AAGAAGGTGGATCAACTAGT+TGG - chr7_3:27015509-27015528 Msa1098910:CDS 40.0%
GGGTTAACATGTCCTTGAAC+TGG + chr7_3:27013071-27013090 None:intergenic 45.0%
TCTAGCCAAACATGGTTGCA+AGG - chr7_3:27013112-27013131 Msa1098910:CDS 45.0%
AGTGACCTTGCAACCATGTT+TGG + chr7_3:27013120-27013139 None:intergenic 45.0%
CACCAGCTTTCGATCGTTTA+TGG + chr7_3:27013163-27013182 None:intergenic 45.0%
CGAGCAAGACAAGATACAAG+TGG - chr7_3:27013187-27013206 Msa1098910:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr7_3:27013866-27013885 Msa1098910:intron 45.0%
ACAACAAATTTCCCATGGCG+CGG - chr7_3:27014855-27014874 Msa1098910:intron 45.0%
ACTGCTTATGATCTTGAGCC+TGG - chr7_3:27014954-27014973 Msa1098910:intron 45.0%
GGACCAATTGGTAGGAACTT+TGG + chr7_3:27014996-27015015 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG + chr7_3:27015004-27015023 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG - chr7_3:27015001-27015020 Msa1098910:intron 45.0%
CTTGCCATCAATGGACCAAT+TGG + chr7_3:27015008-27015027 None:intergenic 45.0%
GTCTAGAAGCTCAAGTCCTA+GGG + chr7_3:27015168-27015187 None:intergenic 45.0%
TGTCTAGAAGCTCAAGTCCT+AGG + chr7_3:27015169-27015188 None:intergenic 45.0%
GGACGAACAACCCAAAGAAA+AGG + chr7_3:27015194-27015213 None:intergenic 45.0%
CTTATGAAGCAAGCAATCGC+GGG + chr7_3:27015317-27015336 None:intergenic 45.0%
CTTCAGGCTCCAAACCATCT+GGG + chr7_3:27013220-27013239 None:intergenic 50.0%
TCTTCAGGCTCCAAACCATC+TGG + chr7_3:27013221-27013240 None:intergenic 50.0%
! CTTTGGAAGTCTAGGAGGCA+TGG + chr7_3:27013288-27013307 None:intergenic 50.0%
!! TATGGGTTGGGCTTTGGAAG+TGG - chr7_3:27013373-27013392 Msa1098910:CDS 50.0%
!! ATGGGTTGGGCTTTGGAAGT+GGG - chr7_3:27013374-27013393 Msa1098910:CDS 50.0%
TCCAGCTTCTGCCACTACTT+TGG - chr7_3:27013430-27013449 Msa1098910:CDS 50.0%
GACAGCACAAGCCAAAGTAG+TGG + chr7_3:27013444-27013463 None:intergenic 50.0%
AAAGTCCGAGGTTCGAATCC+CGG - chr7_3:27013907-27013926 Msa1098910:intron 50.0%
AGCATTGCAAAGCCCCATTC+TGG - chr7_3:27014233-27014252 Msa1098910:intron 50.0%
! CGATCTCCTTTTCGCATTGC+AGG - chr7_3:27014777-27014796 Msa1098910:intron 50.0%
GGATTGCCTGCAATGCGAAA+AGG + chr7_3:27014786-27014805 None:intergenic 50.0%
CAAGTGGTGACACTCCCAGA+TGG - chr7_3:27013203-27013222 Msa1098910:CDS 55.0%
GGTGACACTCCCAGATGGTT+TGG - chr7_3:27013208-27013227 Msa1098910:CDS 55.0%
GCCAAAGTAGTGGCAGAAGC+TGG + chr7_3:27013434-27013453 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+TGG + chr7_3:27013864-27013883 None:intergenic 55.0%
CCACGTGAGCTTAGCTCAGT+TGG - chr7_3:27013861-27013880 Msa1098910:CDS 55.0%
! ATAGAAGAGGGAAGGGGCGT+GGG - chr7_3:27014197-27014216 Msa1098910:intron 55.0%
TATTGACGCAGTCGGAAGCG+TGG - chr7_3:27014296-27014315 Msa1098910:intron 55.0%
! ATTGACGCAGTCGGAAGCGT+GGG - chr7_3:27014297-27014316 Msa1098910:intron 55.0%
TCTTATCTACGCCGCGCCAT+GGG + chr7_3:27014869-27014888 None:intergenic 55.0%
ATCTTATCTACGCCGCGCCA+TGG + chr7_3:27014870-27014889 None:intergenic 55.0%
TGAAGCAAGCAATCGCGGGA+TGG + chr7_3:27015313-27015332 None:intergenic 55.0%
GGTGTCCGGGATTCGAACCT+CGG + chr7_3:27013915-27013934 None:intergenic 60.0%
CATAGAAGAGGGAAGGGGCG+TGG - chr7_3:27014196-27014215 Msa1098910:intron 60.0%
!! TCGGAAGCGTGGGCTAGCAA+GGG - chr7_3:27014307-27014326 Msa1098910:intron 60.0%
!! GTCGGAAGCGTGGGCTAGCA+AGG - chr7_3:27014306-27014325 Msa1098910:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 27013032 27015649 27013032 ID=Msa1098910;Name=Msa1098910
chr7_3 mRNA 27013032 27015649 27013032 ID=Msa1098910-mRNA-1;Parent=Msa1098910;Name=Msa1098910-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|441
chr7_3 exon 27015175 27015649 27015175 ID=Msa1098910-mRNA-1:exon:5713;Parent=Msa1098910-mRNA-1
chr7_3 exon 27013032 27013882 27013032 ID=Msa1098910-mRNA-1:exon:5712;Parent=Msa1098910-mRNA-1
chr7_3 CDS 27015175 27015649 27015175 ID=Msa1098910-mRNA-1:cds;Parent=Msa1098910-mRNA-1
chr7_3 CDS 27013032 27013882 27013032 ID=Msa1098910-mRNA-1:cds;Parent=Msa1098910-mRNA-1
Gene Sequence

>Msa1098910

ATGGGTGTATTGCCACATTTTCTTGTTATACCATATCCAGTTCAAGGACATGTTAACCCCCTTATGCAATTCTCACAAGTTCTAGCCAAACATGGTTGCAAGGTCACTTTTCTACATACTGAGTTTAACCATAAACGATCGAAAGCTGGTGTTTCCGAGCAAGACAAGATACAAGTGGTGACACTCCCAGATGGTTTGGAGCCTGAAGATGATAGAAGTGATATAAAGAAAGTTCTTTTTTCAATTAAAAGTACCATGCCTCCTAGACTTCCAAAGCTTATAGAAGATGTTAATGCTTTGAATGTTGACAACAATATCAAATGGATTGTTGCTACATTTAATATGGGTTGGGCTTTGGAAGTGGGACACAATTTGGGAATCAAAGGGGCTCTACTTTTTCCAGCTTCTGCCACTACTTTGGCTTGTGCTGTCTGCATACCTAAACTTATTGAGGATGGGATTATTGATTCTGCAGGCAATCCCACCAAAAAACAAGAAATTCAAATCTCCCCTGATATACCTATGATAGACACAACAAATTTCCCATGGCGCGGCGTAGATAAGATGTTATTTGATCATTTTGTGCAAGAGATACAAACTATAAAATTTGGAGAACGGTGGCTTTGCAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATATCACCAAAGTTCCTACCAATTGGTCCATTGATGGCAAGTAACAACAACAAAAGTTCATTTTGGCAAGAAGATACAACTTGCTTAGATTGGTTGAATAATCAAGCACCTCAATCTGTCATATATGTTTCCTTTGGTAGTATGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGAGCTTCTAGACAAGCCTTTTCTTTGGGTTGTTCGTCCTAGTAATGACAATAAGGTAAACTATGCATACCCAAATGATTTCCATGGAAGTAAAGGTAAAATTGTTGGTTGGGCACCACAAAGTAAAATCTTGAACCATCCCGCGATTGCTTGCTTCATAAGTCATTGTGGATGGAATTCTACCATAGAAGGTGTACATGTTGGTGTACCTTTATTGTGTTGGCCATTTTCAGTTGATCAGTTTCTCAATAAATCGTATATTTGTGATGTGTGGAAGACTGGACTTGAATTAGAGAAAGATGATAATGGTTTTATATCAAGGCAAGAGATAAAGAAGAAGGTGGATCAACTAGTTGGTGATGATGATATAAAGGCAATGTGTTTGAAAATGAAGAAAATGATCATTAGTAATATAGAAGAAGGTGCTCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGTGTTAAAGCCTAA

Protein sequence

>Msa1098910

MGVLPHFLVIPYPVQGHVNPLMQFSQVLAKHGCKVTFLHTEFNHKRSKAGVSEQDKIQVVTLPDGLEPEDDRSDIKKVLFSIKSTMPPRLPKLIEDVNALNVDNNIKWIVATFNMGWALEVGHNLGIKGALLFPASATTLACAVCIPKLIEDGIIDSAGNPTKKQEIQISPDIPMIDTTNFPWRGVDKMLFDHFVQEIQTIKFGERWLCNTAYDLEPGVFSISPKFLPIGPLMASNNNKSSFWQEDTTCLDWLNNQAPQSVIYVSFGSMVVMDQNQFNELALGLELLDKPFLWVVRPSNDNKVNYAYPNDFHGSKGKIVGWAPQSKILNHPAIACFISHCGWNSTIEGVHVGVPLLCWPFSVDQFLNKSYICDVWKTGLELEKDDNGFISRQEIKKKVDQLVGDDDIKAMCLKMKKMIISNIEEGAQSSHNLQKFISCVKA*