AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1142310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1142310 MtrunA17_Chr7g0218831 83.656 465 48 1 1 465 1 437 0.0 796
Msa1142310 MtrunA17_Chr7g0218841 81.760 466 56 2 1 465 1 438 0.0 776
Msa1142310 MtrunA17_Chr7g0218811 65.021 466 133 3 1 465 11 447 0.0 620
Msa1142310 MtrunA17_Chr7g0218821 62.500 480 139 4 1 468 1 451 0.0 612
Msa1142310 MtrunA17_Chr7g0218791 51.797 473 188 6 5 468 4 445 3.67e-174 496
Msa1142310 MtrunA17_Chr3g0078841 31.084 489 285 11 5 464 9 474 9.33e-72 234
Msa1142310 MtrunA17_Chr6g0454341 31.098 492 281 14 5 464 9 474 1.91e-69 229
Msa1142310 MtrunA17_Chr8g0336331 30.390 487 288 10 6 464 10 473 5.31e-69 228
Msa1142310 MtrunA17_Chr6g0454401 31.452 496 283 15 5 467 9 480 6.65e-69 227
Msa1142310 MtrunA17_Chr6g0453961 31.855 496 281 16 5 467 18 489 2.16e-68 226
Msa1142310 MtrunA17_Chr6g0454261 29.592 490 299 11 5 467 9 479 2.25e-68 226
Msa1142310 MtrunA17_Chr7g0217881 31.959 485 276 14 5 467 9 461 2.65e-68 225
Msa1142310 MtrunA17_Chr2g0278711 32.449 490 281 13 5 467 10 476 1.08e-67 224
Msa1142310 MtrunA17_Chr6g0454141 30.645 496 286 14 5 467 9 479 1.20e-66 221
Msa1142310 MtrunA17_Chr6g0454181 30.505 495 288 13 5 467 9 479 1.31e-66 221
Msa1142310 MtrunA17_Chr3g0118661 30.328 488 289 12 5 464 12 476 2.11e-66 221
Msa1142310 MtrunA17_Chr6g0453951 29.899 495 291 12 5 467 56 526 9.51e-66 220
Msa1142310 MtrunA17_Chr3g0118671 31.440 493 282 14 6 467 6 473 9.98e-66 219
Msa1142310 MtrunA17_Chr6g0454191 31.187 497 283 17 5 467 9 480 1.29e-65 219
Msa1142310 MtrunA17_Chr5g0448551 30.197 457 269 13 5 447 6 426 3.64e-65 217
Msa1142310 MtrunA17_Chr6g0454291 30.143 491 289 11 5 464 6 473 5.33e-65 217
Msa1142310 MtrunA17_Chr6g0454211 31.365 491 283 14 5 464 296 763 8.57e-65 223
Msa1142310 MtrunA17_Chr6g0454211 37.888 161 57 5 238 384 105 236 2.21e-23 103
Msa1142310 MtrunA17_Chr8g0359821 31.405 484 296 13 5 467 9 477 1.35e-64 216
Msa1142310 MtrunA17_Chr6g0454321 29.839 496 282 16 6 468 10 472 1.57e-64 220
Msa1142310 MtrunA17_Chr6g0454331 30.242 496 290 13 5 467 6 478 1.87e-64 216
Msa1142310 MtrunA17_Chr6g0454151 30.242 496 286 13 5 467 9 477 2.20e-64 215
Msa1142310 MtrunA17_Chr6g0454361 29.637 496 295 11 3 467 8 480 5.24e-64 214
Msa1142310 MtrunA17_Chr6g0454301 31.340 485 289 12 5 464 262 727 2.32e-63 218
Msa1142310 MtrunA17_Chr6g0454301 37.712 236 122 5 252 466 3 234 7.16e-43 161
Msa1142310 MtrunA17_Chr7g0249981 30.185 487 270 14 6 467 25 466 5.02e-63 212
Msa1142310 MtrunA17_Chr3g0118701 29.757 494 291 13 5 467 14 482 6.16e-63 212
Msa1142310 MtrunA17_Chr5g0426431 32.587 491 275 17 4 464 10 474 8.57e-63 211
Msa1142310 MtrunA17_Chr3g0092641 31.377 494 277 16 4 464 10 474 3.92e-62 209
Msa1142310 MtrunA17_Chr3g0118691 29.757 494 291 13 5 467 14 482 4.11e-62 209
Msa1142310 MtrunA17_Chr3g0118771 29.328 491 291 14 5 464 20 485 2.54e-61 207
Msa1142310 MtrunA17_Chr3g0118711 29.899 495 289 15 5 467 12 480 3.03e-61 207
Msa1142310 MtrunA17_Chr6g0464871 29.448 489 277 13 4 467 21 466 1.82e-60 204
Msa1142310 MtrunA17_Chr6g0454131 29.175 497 291 11 5 467 9 478 3.23e-60 204
Msa1142310 MtrunA17_Chr6g0452771 31.211 487 295 14 5 467 9 479 1.63e-59 202
Msa1142310 MtrunA17_Chr6g0464861 30.801 487 270 17 5 467 10 453 3.82e-59 201
Msa1142310 MtrunA17_Chr6g0454121 30.408 490 288 12 5 464 9 475 6.01e-59 201
Msa1142310 MtrunA17_Chr6g0454201 29.376 497 295 15 3 467 8 480 1.29e-58 200
Msa1142310 MtrunA17_Chr4g0050341 28.486 502 285 14 5 464 18 487 3.96e-57 196
Msa1142310 MtrunA17_Chr4g0053321 29.209 493 271 14 8 465 28 477 3.11e-56 194
Msa1142310 MtrunA17_Chr6g0464921 28.980 490 273 15 5 465 10 453 3.33e-56 193
Msa1142310 MtrunA17_Chr6g0464881 28.247 485 284 12 4 465 9 452 3.48e-56 193
Msa1142310 MtrunA17_Chr5g0412111 29.175 497 283 13 5 469 4 463 6.41e-56 192
Msa1142310 MtrunA17_Chr4g0053501 27.879 495 279 15 6 465 11 462 1.89e-55 192
Msa1142310 MtrunA17_Chr8g0380531 29.752 484 284 12 6 468 10 458 4.66e-55 190
Msa1142310 MtrunA17_Chr5g0414321 29.697 495 255 15 6 464 11 448 5.30e-55 190
Msa1142310 MtrunA17_Chr6g0464841 29.857 489 275 15 4 467 9 454 7.42e-55 189
Msa1142310 MtrunA17_Chr6g0454351 27.733 494 286 12 5 467 11 464 2.56e-54 188
Msa1142310 MtrunA17_Chr3g0118751 29.158 487 268 15 5 464 5 441 3.13e-54 187
Msa1142310 MtrunA17_Chr7g0250001 27.423 485 286 12 6 467 6 447 1.76e-53 186
Msa1142310 MtrunA17_Chr5g0414331 31.042 480 268 16 6 464 13 450 1.80e-53 186
Msa1142310 MtrunA17_Chr1g0207981 26.220 492 295 10 6 464 13 469 5.29e-53 185
Msa1142310 MtrunA17_Chr6g0454251 29.440 411 239 13 5 385 6 395 5.92e-52 180
Msa1142310 MtrunA17_Chr7g0249931 27.254 488 285 14 6 467 40 483 1.23e-51 181
Msa1142310 MtrunA17_Chr5g0423981 39.357 249 128 5 238 467 200 444 5.31e-51 179
Msa1142310 MtrunA17_Chr5g0412131 28.373 504 281 15 4 469 10 471 9.23e-51 179
Msa1142310 MtrunA17_Chr6g0454271 35.968 253 137 6 235 467 39 286 1.37e-50 174
Msa1142310 MtrunA17_Chr6g0454221 39.565 230 117 5 252 464 3 227 5.94e-50 172
Msa1142310 MtrunA17_Chr3g0112761 29.522 481 275 18 6 464 8 446 2.55e-49 175
Msa1142310 MtrunA17_Chr5g0412101 27.843 510 275 14 5 469 11 472 1.40e-47 170
Msa1142310 MtrunA17_Chr1g0161351 27.347 490 301 12 6 468 37 498 5.67e-47 169
Msa1142310 MtrunA17_Chr7g0243681 28.740 508 281 19 6 469 11 481 6.69e-47 169
Msa1142310 MtrunA17_Chr8g0377921 25.904 498 300 13 4 467 1 463 8.04e-47 168
Msa1142310 MtrunA17_Chr3g0121991 26.397 519 276 15 6 467 79 548 2.40e-46 169
Msa1142310 MtrunA17_Chr7g0249961 37.339 233 127 5 250 467 31 259 9.23e-45 157
Msa1142310 MtrunA17_Chr7g0243631 28.927 522 267 20 6 469 13 488 2.25e-44 162
Msa1142310 MtrunA17_Chr3g0112771 26.994 489 273 16 8 465 14 449 3.13e-44 161
Msa1142310 MtrunA17_Chr5g0401721 26.962 497 290 15 8 467 10 470 8.27e-44 160
Msa1142310 MtrunA17_Chr1g0207861 26.815 496 296 15 6 468 8 469 8.71e-44 160
Msa1142310 MtrunA17_Chr8g0377941 27.708 480 294 15 8 464 9 458 1.19e-43 160
Msa1142310 MtrunA17_Chr7g0232401 28.763 372 207 10 118 463 124 463 1.31e-43 159
Msa1142310 MtrunA17_Chr7g0232411 26.800 500 284 15 6 465 6 463 1.61e-43 159
Msa1142310 MtrunA17_Chr8g0365811 27.959 490 298 15 8 469 497 959 1.74e-43 164
Msa1142310 MtrunA17_Chr8g0365811 28.097 452 261 15 6 424 9 429 1.96e-41 158
Msa1142310 MtrunA17_Chr7g0243931 26.810 511 292 15 6 469 17 492 1.82e-43 160
Msa1142310 MtrunA17_Chr7g0232331 28.481 474 276 16 1 445 1 440 4.29e-43 158
Msa1142310 MtrunA17_Chr3g0098111 36.522 230 129 6 256 468 241 470 4.35e-43 158
Msa1142310 MtrunA17_Chr8g0347281 27.143 490 282 17 5 460 17 465 6.16e-43 158
Msa1142310 MtrunA17_Chr3g0122001 26.367 512 276 16 6 464 486 949 1.42e-42 161
Msa1142310 MtrunA17_Chr3g0122001 26.346 520 276 19 6 467 6 476 3.93e-39 151
Msa1142310 MtrunA17_Chr6g0462521 29.396 381 206 12 97 456 101 439 1.47e-42 156
Msa1142310 MtrunA17_Chr4g0044521 26.908 498 276 18 11 466 14 465 1.64e-42 156
Msa1142310 MtrunA17_Chr7g0232341 27.637 474 280 13 1 445 1 440 2.00e-42 156
Msa1142310 MtrunA17_Chr8g0347271 26.531 490 285 15 5 460 18 466 3.46e-42 156
Msa1142310 MtrunA17_Chr8g0335161 28.151 476 266 18 6 445 6 441 3.56e-42 155
Msa1142310 MtrunA17_Chr7g0243871 26.052 499 297 10 8 469 11 474 4.99e-42 155
Msa1142310 MtrunA17_Chr7g0275681 26.680 506 288 15 4 464 10 477 5.13e-42 155
Msa1142310 MtrunA17_Chr5g0431441 27.459 488 288 15 6 467 18 465 5.25e-42 155
Msa1142310 MtrunA17_Chr6g0454171 35.950 242 117 6 238 464 88 306 6.38e-42 151
Msa1142310 MtrunA17_Chr7g0243771 27.559 508 288 16 6 469 6 477 7.06e-42 155
Msa1142310 MtrunA17_Chr4g0044511 28.125 512 275 23 6 469 40 506 1.41e-41 155
Msa1142310 MtrunA17_Chr7g0232391 27.439 492 291 15 6 465 6 463 1.75e-41 154
Msa1142310 MtrunA17_Chr4g0032331 29.194 459 252 17 6 438 8 419 3.39e-41 152
Msa1142310 MtrunA17_Chr6g0459311 25.911 494 285 14 9 463 16 467 3.77e-41 153
Msa1142310 MtrunA17_Chr8g0339441 30.769 351 183 13 166 463 82 425 5.62e-41 152
Msa1142310 MtrunA17_Chr6g0486251 27.495 491 275 17 9 460 9 457 5.82e-41 152
Msa1142310 MtrunA17_Chr6g0486201 27.495 491 275 17 9 460 9 457 5.82e-41 152
Msa1142310 MtrunA17_Chr3g0118721 37.198 207 119 4 268 467 87 289 5.99e-41 148
Msa1142310 MtrunA17_Chr6g0462531 38.288 222 122 5 252 463 244 460 1.01e-40 152
Msa1142310 MtrunA17_Chr7g0243951 27.539 512 286 17 6 469 11 485 1.61e-40 152
Msa1142310 MtrunA17_Chr8g0336651 27.545 501 276 16 6 462 781 1238 2.05e-40 155
Msa1142310 MtrunA17_Chr8g0336651 31.065 338 165 11 164 463 132 439 1.39e-36 144
Msa1142310 MtrunA17_Chr8g0336651 32.692 260 139 7 219 463 532 770 1.45e-35 140
Msa1142310 MtrunA17_Chr1g0207831 27.218 496 287 19 7 468 9 464 2.72e-40 150
Msa1142310 MtrunA17_Chr8g0339451 39.301 229 116 8 257 463 232 459 3.20e-40 150
Msa1142310 MtrunA17_Chr8g0334851 25.755 497 289 16 1 456 1 458 4.23e-40 150
Msa1142310 MtrunA17_Chr7g0275511 27.097 465 287 14 5 445 14 450 7.85e-40 149
Msa1142310 MtrunA17_Chr8g0339461 37.991 229 119 8 257 463 240 467 1.29e-39 149
Msa1142310 MtrunA17_Chr7g0243801 27.237 503 288 16 10 469 11 478 1.54e-39 149
Msa1142310 MtrunA17_Chr5g0426401 35.319 235 138 5 239 464 78 307 1.66e-39 145
Msa1142310 MtrunA17_Chr8g0336691 26.667 495 288 13 6 463 13 469 1.97e-39 152
Msa1142310 MtrunA17_Chr8g0336691 26.411 496 288 13 6 463 919 1375 1.43e-36 144
Msa1142310 MtrunA17_Chr8g0336691 26.446 484 275 15 6 463 480 908 8.96e-33 132
Msa1142310 MtrunA17_Chr8g0373301 35.714 224 123 7 257 463 243 462 2.45e-39 148
Msa1142310 MtrunA17_Chr1g0207931 35.217 230 132 7 256 468 269 498 3.64e-39 148
Msa1142310 MtrunA17_Chr8g0335141 26.157 497 301 17 1 465 4 466 7.54e-39 146
Msa1142310 MtrunA17_Chr6g0462551 36.323 223 130 5 251 463 240 460 8.81e-39 146
Msa1142310 MtrunA17_Chr7g0243861 26.265 514 291 18 6 469 14 489 1.03e-38 147
Msa1142310 MtrunA17_Chr6g0462541 35.426 223 129 4 251 463 242 459 1.10e-38 146
Msa1142310 MtrunA17_Chr7g0265141 27.112 509 286 18 6 464 9 482 1.30e-38 146
Msa1142310 MtrunA17_Chr1g0207971 33.778 225 134 5 256 468 233 454 1.67e-38 145
Msa1142310 MtrunA17_Chr6g0462571 30.208 288 173 7 199 463 175 457 2.20e-38 145
Msa1142310 MtrunA17_Chr1g0207951 35.242 227 125 6 257 468 352 571 3.08e-38 148
Msa1142310 MtrunA17_Chr1g0207951 36.434 258 142 9 229 467 854 1108 1.05e-37 147
Msa1142310 MtrunA17_Chr8g0366391 26.877 506 293 17 6 469 9 479 6.82e-38 144
Msa1142310 MtrunA17_Chr7g0265101 25.749 501 304 17 6 464 9 483 1.84e-37 143
Msa1142310 MtrunA17_Chr5g0393591 24.590 488 281 13 3 468 14 436 2.77e-37 142
Msa1142310 MtrunA17_Chr5g0403641 33.096 281 145 10 204 449 209 481 3.48e-37 142
Msa1142310 MtrunA17_Chr1g0153451 26.411 496 285 13 6 463 6 459 4.08e-37 142
Msa1142310 MtrunA17_Chr4g0060511 26.062 518 290 15 6 469 11 489 4.70e-37 142
Msa1142310 MtrunA17_Chr8g0339601 37.607 234 123 8 257 468 99 331 5.51e-37 138
Msa1142310 MtrunA17_Chr8g0336741 26.639 488 277 14 6 458 13 454 6.03e-37 141
Msa1142310 MtrunA17_Chr7g0265041 25.681 514 292 16 4 464 9 485 7.89e-37 141
Msa1142310 MtrunA17_Chr5g0419761 29.099 433 249 17 6 409 9 412 1.04e-36 141
Msa1142310 MtrunA17_Chr7g0232311 35.319 235 127 7 252 465 231 461 3.43e-36 139
Msa1142310 MtrunA17_Chr6g0449931 26.369 493 287 17 6 460 6 460 3.72e-36 139
Msa1142310 MtrunA17_Chr3g0106231 24.900 502 275 15 3 467 15 451 4.18e-36 139
Msa1142310 MtrunA17_Chr8g0339631 35.776 232 127 8 257 468 240 469 1.38e-35 137
Msa1142310 MtrunA17_Chr8g0334861 33.212 274 150 8 192 436 161 430 2.71e-35 137
Msa1142310 MtrunA17_Chr8g0336731 27.000 400 216 11 90 458 119 473 6.40e-35 136
Msa1142310 MtrunA17_Chr7g0265051 25.294 510 293 17 6 464 9 481 1.33e-34 135
Msa1142310 MtrunA17_Chr8g0355011 38.095 189 99 5 286 464 178 358 2.17e-34 132
Msa1142310 MtrunA17_Chr7g0243711 32.013 303 164 11 201 469 24 318 3.11e-34 130
Msa1142310 MtrunA17_Chr1g0153461 34.951 206 115 5 277 463 3 208 7.02e-34 127
Msa1142310 MtrunA17_Chr7g0235051 33.721 258 138 8 236 460 189 446 7.99e-34 132
Msa1142310 MtrunA17_Chr6g0454371 36.842 171 98 3 300 464 1 167 8.03e-34 125
Msa1142310 MtrunA17_Chr4g0011051 26.437 522 275 22 6 464 9 484 9.16e-34 133
Msa1142310 MtrunA17_Chr7g0243781 35.484 217 119 5 274 469 261 477 1.11e-33 132
Msa1142310 MtrunA17_Chr7g0243761 36.869 198 103 5 278 469 275 456 1.12e-33 132
Msa1142310 MtrunA17_Chr4g0066281 25.202 496 296 13 7 468 13 467 1.56e-33 132
Msa1142310 MtrunA17_Chr4g0066201 26.978 493 287 17 10 468 22 475 3.66e-33 131
Msa1142310 MtrunA17_Chr7g0265151 31.674 221 130 5 265 464 260 480 3.68e-33 131
Msa1142310 MtrunA17_Chr4g0066261 35.945 217 113 7 277 468 267 482 5.35e-33 130
Msa1142310 MtrunA17_Chr5g0428081 27.470 506 286 19 6 468 13 480 5.71e-33 130
Msa1142310 MtrunA17_Chr4g0066131 26.052 499 289 16 10 468 17 475 6.11e-33 130
Msa1142310 MtrunA17_Chr5g0431371 24.174 484 304 16 6 469 10 450 7.02e-33 129
Msa1142310 MtrunA17_Chr7g0243851 35.981 214 118 5 275 469 231 444 1.09e-32 129
Msa1142310 MtrunA17_Chr5g0429711 26.829 492 283 17 6 464 11 458 1.31e-32 129
Msa1142310 MtrunA17_Chr2g0307961 26.087 299 196 5 186 461 166 462 1.48e-32 129
Msa1142310 MtrunA17_Chr1g0173121 28.315 279 164 5 218 467 191 462 2.36e-32 128
Msa1142310 MtrunA17_Chr4g0044481 35.211 213 117 7 211 407 190 397 4.57e-32 127
Msa1142310 MtrunA17_Chr7g0243911 35.979 189 105 4 273 445 17 205 6.04e-32 122
Msa1142310 MtrunA17_Chr8g0382021 25.051 491 293 16 11 467 39 488 7.10e-32 127
Msa1142310 MtrunA17_Chr4g0044501 26.263 495 299 19 6 465 10 473 8.59e-32 127
Msa1142310 MtrunA17_Chr5g0431421 24.845 483 298 17 6 467 10 448 8.73e-32 126
Msa1142310 MtrunA17_Chr5g0431361 24.689 482 307 17 6 469 12 455 1.01e-31 126
Msa1142310 MtrunA17_Chr7g0218311 34.389 221 121 6 272 468 264 484 1.21e-31 127
Msa1142310 MtrunA17_Chr3g0079731 32.766 235 135 7 252 464 244 477 2.54e-31 125
Msa1142310 MtrunA17_Chr4g0066151 26.200 500 287 17 10 468 22 480 2.55e-31 125
Msa1142310 MtrunA17_Chr8g0374901 26.506 498 295 18 9 468 15 479 2.62e-31 125
Msa1142310 MtrunA17_Chr4g0066221 35.780 218 113 8 277 468 265 481 3.44e-31 125
Msa1142310 MtrunA17_Chr4g0066171 35.681 213 114 6 278 468 266 477 4.29e-31 125
Msa1142310 MtrunA17_Chr5g0442491 24.660 515 282 19 10 467 9 474 4.63e-31 125
Msa1142310 MtrunA17_Chr2g0329111 23.471 507 306 17 8 467 8 479 5.70e-31 125
Msa1142310 MtrunA17_Chr5g0431401 24.740 481 305 16 6 469 10 450 8.08e-31 124
Msa1142310 MtrunA17_Chr5g0419771 31.933 238 133 6 257 465 273 510 8.28e-31 124
Msa1142310 MtrunA17_Chr5g0440421 29.588 267 153 8 235 467 228 493 8.82e-31 124
Msa1142310 MtrunA17_Chr4g0014061 31.878 229 135 6 255 464 243 469 1.07e-30 124
Msa1142310 MtrunA17_Chr6g0463861 26.104 498 289 20 6 464 13 470 1.24e-30 124
Msa1142310 MtrunA17_Chr5g0410941 25.749 501 299 20 6 468 25 490 1.44e-30 124
Msa1142310 MtrunA17_Chr8g0336261 39.716 141 77 3 300 436 1 137 1.57e-30 115
Msa1142310 MtrunA17_Chr8g0374971 33.641 217 119 5 277 468 265 481 1.60e-30 123
Msa1142310 MtrunA17_Chr1g0159551 29.825 228 142 4 256 467 234 459 1.80e-30 123
Msa1142310 MtrunA17_Chr2g0294931 34.884 215 116 6 278 468 268 482 1.83e-30 123
Msa1142310 MtrunA17_Chr8g0361371 29.832 238 131 6 256 464 237 467 1.96e-30 123
Msa1142310 MtrunA17_Chr5g0401851 23.828 512 302 17 8 469 12 485 2.03e-30 123
Msa1142310 MtrunA17_Chr5g0448521 22.736 497 307 15 10 467 9 467 2.29e-30 122
Msa1142310 MtrunA17_Chr7g0243611 33.962 212 118 6 225 416 71 280 2.39e-30 119
Msa1142310 MtrunA17_Chr4g0072771 31.982 222 136 5 254 469 255 467 4.03e-30 122
Msa1142310 MtrunA17_Chr7g0265111 31.667 240 133 6 257 465 274 513 4.30e-30 122
Msa1142310 MtrunA17_Chr5g0442561 23.600 500 304 20 10 467 9 472 4.71e-30 122
Msa1142310 MtrunA17_Chr6g0463891 25.444 507 299 17 8 469 14 486 8.86e-30 121
Msa1142310 MtrunA17_Chr3g0106251 28.223 287 170 6 200 467 24 293 1.05e-29 118
Msa1142310 MtrunA17_Chr2g0294941 31.325 249 141 7 237 462 123 364 1.79e-29 119
Msa1142310 MtrunA17_Chr8g0374931 33.333 216 120 6 277 468 267 482 1.82e-29 120
Msa1142310 MtrunA17_Chr8g0374941 33.486 218 118 8 277 468 1202 1418 2.63e-29 122
Msa1142310 MtrunA17_Chr8g0374941 35.000 180 94 6 277 434 264 442 4.11e-27 115
Msa1142310 MtrunA17_Chr8g0374941 25.859 495 283 18 9 463 479 929 3.82e-26 112
Msa1142310 MtrunA17_Chr5g0442581 29.832 238 140 5 256 467 240 476 2.74e-29 120
Msa1142310 MtrunA17_Chr5g0420801 25.767 489 301 22 6 468 7 459 3.09e-29 119
Msa1142310 MtrunA17_Chr5g0442541 24.104 502 292 17 10 467 9 465 3.15e-29 119
Msa1142310 MtrunA17_Chr1g0179901 32.857 210 119 3 278 465 282 491 3.68e-29 119
Msa1142310 MtrunA17_Chr4g0072761 30.594 219 143 4 254 469 242 454 5.57e-29 118
Msa1142310 MtrunA17_Chr5g0409591 34.375 192 105 5 264 436 263 452 6.08e-29 119
Msa1142310 MtrunA17_Chr5g0429681 24.847 491 305 14 6 467 44 499 1.43e-28 118
Msa1142310 MtrunA17_Chr8g0334831 27.984 243 138 5 256 464 236 475 1.66e-28 117
Msa1142310 MtrunA17_Chr5g0416741 24.314 510 299 19 8 469 15 485 1.73e-28 117
Msa1142310 MtrunA17_Chr5g0442601 23.819 508 301 18 8 467 406 875 2.08e-28 119
Msa1142310 MtrunA17_Chr5g0442601 33.918 171 90 5 256 404 166 335 1.03e-22 101
Msa1142310 MtrunA17_Chr5g0442511 29.508 244 133 9 256 468 259 494 2.21e-28 117
Msa1142310 MtrunA17_Chr8g0355221 33.790 219 120 7 273 469 273 488 2.51e-28 117
Msa1142310 MtrunA17_Chr5g0432731 28.000 275 164 6 216 467 33 296 4.43e-28 113
Msa1142310 MtrunA17_Chr8g0336251 25.000 492 305 16 6 468 7 463 7.24e-28 115
Msa1142310 MtrunA17_Chr1g0165701 34.404 218 118 7 273 469 272 485 7.41e-28 116
Msa1142310 MtrunA17_Chr8g0350881 33.641 217 119 5 277 468 265 481 8.28e-28 115
Msa1142310 MtrunA17_Chr8g0336321 25.000 492 305 16 6 468 7 463 1.66e-27 114
Msa1142310 MtrunA17_Chr2g0294921 31.944 216 123 5 277 468 416 631 1.73e-27 115
Msa1142310 MtrunA17_Chr6g0463851 29.493 217 128 4 277 468 267 483 1.83e-27 114
Msa1142310 MtrunA17_Chr8g0369341 31.169 231 147 7 248 468 241 469 3.38e-27 114
Msa1142310 MtrunA17_Chr5g0442521 27.236 246 143 6 252 467 236 475 3.64e-27 114
Msa1142310 MtrunA17_Chr8g0370941 32.195 205 106 5 257 430 243 445 1.93e-26 112
Msa1142310 MtrunA17_Chr2g0302991 28.571 259 158 7 226 464 208 459 2.99e-26 110
Msa1142310 MtrunA17_Chr7g0243811 33.486 218 123 7 220 420 176 388 3.50e-26 109
Msa1142310 MtrunA17_Chr7g0232351 35.417 192 93 7 219 384 192 378 1.26e-25 107
Msa1142310 MtrunA17_Chr7g0241781 35.673 171 104 5 276 445 239 404 1.65e-25 108
Msa1142310 MtrunA17_Chr7g0250021 26.796 362 201 11 6 347 12 329 1.84e-25 106
Msa1142310 MtrunA17_Chr8g0367221 25.514 486 293 19 6 460 12 459 1.07e-24 108
Msa1142310 MtrunA17_Chr8g0367221 25.556 450 254 18 6 418 798 1203 3.97e-24 106
Msa1142310 MtrunA17_Chr8g0367221 25.000 488 294 19 6 460 1288 1736 5.65e-24 105
Msa1142310 MtrunA17_Chr8g0361411 23.591 479 310 12 6 464 8 450 1.69e-24 105
Msa1142310 MtrunA17_Chr3g0079711 30.811 185 106 6 304 466 3 187 4.31e-24 99.4
Msa1142310 MtrunA17_Chr7g0241801 35.000 160 98 5 276 434 239 393 1.05e-23 103
Msa1142310 MtrunA17_Chr2g0302961 27.969 261 157 8 226 464 211 462 1.35e-23 103
Msa1142310 MtrunA17_Chr4g0040711 31.527 203 124 5 256 448 242 439 2.02e-23 102
Msa1142310 MtrunA17_Chr6g0454231 28.384 229 119 5 245 467 29 218 2.27e-23 102
Msa1142310 MtrunA17_Chr6g0454231 29.655 145 93 4 5 140 249 393 2.44e-13 72.0
Msa1142310 MtrunA17_Chr1g0207881 36.923 130 77 3 344 468 256 385 7.68e-23 100
Msa1142310 MtrunA17_Chr4g0029131 35.976 164 96 5 280 434 257 420 1.35e-22 101
Msa1142310 MtrunA17_Chr2g0283041 31.343 201 127 6 280 469 258 458 1.41e-22 100
Msa1142310 MtrunA17_Chr4g0040691 32.961 179 110 4 280 448 261 439 1.08e-21 97.4
Msa1142310 MtrunA17_Chr4g0029151 35.366 164 97 5 280 434 265 428 2.09e-21 96.7
Msa1142310 MtrunA17_Chr8g0357361 30.653 199 120 6 236 418 65 261 4.03e-21 92.8
Msa1142310 MtrunA17_Chr5g0427571 31.068 206 122 7 275 468 100 297 7.19e-21 92.8
Msa1142310 MtrunA17_Chr1g0196851 33.918 171 103 6 273 434 291 460 7.63e-21 95.1
Msa1142310 MtrunA17_Chr4g0042931 30.085 236 141 7 245 464 233 460 7.73e-21 95.1
Msa1142310 MtrunA17_Chr5g0431431 29.218 243 155 5 170 402 89 324 1.10e-20 93.2
Msa1142310 MtrunA17_Chr8g0337381 36.975 119 74 1 346 463 3 121 1.83e-20 87.4
Msa1142310 MtrunA17_Chr4g0042891 28.261 230 142 4 252 464 239 462 1.95e-20 93.6
Msa1142310 MtrunA17_Chr2g0278721 24.835 455 286 16 6 434 517 941 3.82e-20 94.0
Msa1142310 MtrunA17_Chr2g0278721 22.697 445 299 17 6 434 15 430 2.07e-18 88.6
Msa1142310 MtrunA17_Chr3g0092031 32.919 161 98 5 280 434 6 162 1.07e-19 87.0
Msa1142310 MtrunA17_Chr4g0069611 30.396 227 140 8 232 444 212 434 2.45e-19 90.5
Msa1142310 MtrunA17_Chr5g0416821 29.630 216 117 8 274 469 275 475 1.69e-18 87.8
Msa1142310 MtrunA17_Chr2g0319761 25.974 462 275 18 1 436 1 421 2.67e-18 87.0
Msa1142310 MtrunA17_Chr7g0231631 27.715 267 144 11 236 469 11 261 3.93e-18 84.3
Msa1142310 MtrunA17_Chr4g0039881 23.963 434 282 14 16 434 2 402 9.93e-18 85.5
Msa1142310 MtrunA17_Chr6g0464091 35.616 146 84 5 280 419 279 420 4.58e-17 83.6
Msa1142310 MtrunA17_Chr4g0066141 32.624 141 81 3 343 469 213 353 5.22e-17 82.4
Msa1142310 MtrunA17_Chr2g0319791 32.065 184 113 6 278 449 257 440 9.17e-17 82.4
Msa1142310 MtrunA17_Chr6g0466841 30.380 158 106 3 280 434 272 428 1.59e-16 81.6
Msa1142310 MtrunA17_Chr2g0278741 31.250 160 102 3 280 434 356 512 1.59e-16 82.0
Msa1142310 MtrunA17_Chr2g0302851 32.919 161 98 5 280 434 270 426 2.08e-16 81.3
Msa1142310 MtrunA17_Chr7g0243731 44.000 75 41 1 343 416 6 80 2.55e-16 73.9
Msa1142310 MtrunA17_Chr6g0453981 41.935 93 45 1 242 325 113 205 2.65e-16 78.2
Msa1142310 MtrunA17_Chr6g0482061 27.064 218 144 5 252 455 251 467 6.34e-16 80.1
Msa1142310 MtrunA17_Chr2g0319751 32.065 184 113 6 278 449 734 917 1.28e-15 79.7
Msa1142310 MtrunA17_Chr5g0426411 30.323 155 98 4 5 150 11 164 1.37e-14 71.6
Msa1142310 MtrunA17_Chr6g0466831 28.481 158 109 3 280 434 272 428 1.55e-14 75.5
Msa1142310 MtrunA17_Chr6g0454281 29.299 157 99 4 5 149 9 165 3.32e-14 71.6
Msa1142310 MtrunA17_Chr8g0336271 28.671 143 94 2 6 140 10 152 9.82e-14 71.6
Msa1142310 MtrunA17_Chr6g0453941 35.000 120 64 2 220 325 139 258 1.27e-13 71.2
Msa1142310 MtrunA17_Chr2g0321331 30.952 168 96 7 288 440 94 256 3.97e-13 69.7
Msa1142310 MtrunA17_Chr2g0319731 33.333 162 100 6 280 434 276 436 9.57e-13 70.1
Msa1142310 MtrunA17_Chr6g0454111 38.542 96 46 2 238 320 88 183 7.71e-12 64.3
Msa1142310 MtrunA17_Chr2g0319801 31.288 163 104 6 279 434 258 419 9.76e-12 67.0
Msa1142310 MtrunA17_Chr8g0334841 34.127 126 73 3 217 335 22 144 1.55e-11 62.8
Msa1142310 MtrunA17_Chr6g0454391 40.580 69 37 1 359 427 11 75 2.80e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1142310 AT3G02100.1 38.066 486 244 11 5 469 12 461 1.44e-105 322
Msa1142310 AT1G05675.1 31.263 483 271 12 6 465 6 450 3.86e-70 230
Msa1142310 AT1G05680.1 30.498 482 276 11 6 465 6 450 7.88e-67 221
Msa1142310 AT1G22400.1 31.681 464 260 14 5 438 12 448 2.58e-65 218
Msa1142310 AT1G22380.1 30.870 460 268 12 5 438 12 447 8.68e-63 212
Msa1142310 AT1G22360.1 30.968 465 271 13 6 444 10 450 1.56e-62 211
Msa1142310 AT1G22360.2 31.640 433 250 12 6 412 10 422 8.39e-60 203
Msa1142310 AT1G22370.2 31.293 441 244 13 2 412 9 420 3.12e-59 202
Msa1142310 AT1G78270.1 30.586 461 268 15 5 438 12 447 8.61e-59 201
Msa1142310 AT3G46670.1 28.157 483 281 13 8 468 11 449 2.08e-58 199
Msa1142310 AT1G22340.1 29.828 466 278 15 5 444 12 454 4.24e-58 199
Msa1142310 AT3G46660.1 28.364 483 282 13 8 468 16 456 9.53e-58 197
Msa1142310 AT5G59590.1 27.004 474 294 11 6 464 10 446 2.58e-56 194
Msa1142310 AT5G59580.1 28.337 487 288 15 1 468 4 448 1.19e-55 192
Msa1142310 AT3G22250.1 28.216 482 264 15 5 449 7 443 3.38e-55 191
Msa1142310 AT2G31750.1 30.021 483 273 13 8 465 10 452 4.05e-55 191
Msa1142310 AT2G31750.2 29.897 485 275 13 8 467 10 454 7.31e-55 191
Msa1142310 AT3G21560.1 27.237 503 289 14 5 469 11 474 6.50e-54 188
Msa1142310 AT5G38010.1 27.731 476 292 12 6 464 10 450 6.98e-52 182
Msa1142310 AT4G15500.1 27.629 485 295 14 4 464 7 459 2.71e-51 181
Msa1142310 AT3G46680.1 27.176 471 300 12 6 465 9 447 9.39e-51 179
Msa1142310 AT3G11340.1 28.893 488 271 16 5 467 8 444 1.24e-50 178
Msa1142310 AT3G46720.1 27.061 473 297 10 6 469 9 442 3.96e-50 177
Msa1142310 AT3G55710.1 30.801 487 272 18 6 467 8 454 7.11e-50 177
Msa1142310 AT3G55700.1 29.545 484 274 18 8 467 10 450 2.24e-49 175
Msa1142310 AT2G31790.1 27.010 485 295 11 6 467 8 456 2.54e-49 175
Msa1142310 AT2G43840.2 26.263 495 279 14 6 468 7 447 3.84e-49 174
Msa1142310 AT5G05900.1 28.571 476 286 14 8 467 10 447 5.81e-49 174
Msa1142310 AT2G43840.1 26.263 495 279 14 6 468 7 447 1.66e-48 172
Msa1142310 AT3G46700.1 26.722 479 295 14 6 469 9 446 4.81e-48 171
Msa1142310 AT2G43820.1 27.629 485 287 13 6 469 7 448 2.16e-47 170
Msa1142310 AT5G38040.1 28.145 469 279 15 14 464 18 446 2.42e-47 169
Msa1142310 AT2G15490.1 28.711 512 271 19 6 464 7 477 3.40e-47 170
Msa1142310 AT2G15490.3 28.740 508 273 19 6 464 7 474 5.32e-47 169
Msa1142310 AT3G46690.1 26.891 476 293 14 6 464 9 446 6.03e-47 169
Msa1142310 AT5G05870.1 28.870 478 283 20 8 464 10 451 8.60e-47 168
Msa1142310 AT2G15480.1 28.008 507 278 19 6 464 10 477 9.27e-47 169
Msa1142310 AT3G46650.1 26.638 473 278 14 6 463 10 428 1.63e-46 167
Msa1142310 AT4G15550.1 25.447 503 288 16 5 464 12 470 1.00e-45 166
Msa1142310 AT1G05560.1 26.434 488 288 15 5 464 4 448 1.14e-45 166
Msa1142310 AT4G15490.1 26.025 488 300 16 6 464 8 463 1.15e-45 166
Msa1142310 AT1G05560.2 26.434 488 288 15 5 464 54 498 3.76e-45 165
Msa1142310 AT5G05860.1 27.708 480 272 14 8 461 11 441 6.22e-45 163
Msa1142310 AT2G23250.1 26.471 476 276 14 15 465 7 433 6.92e-45 162
Msa1142310 AT2G15480.2 27.079 517 280 19 6 464 10 487 1.34e-44 163
Msa1142310 AT2G26480.1 24.477 478 301 12 8 467 10 445 6.17e-44 160
Msa1142310 AT2G36970.1 27.198 489 305 12 5 468 9 471 7.79e-44 161
Msa1142310 AT5G05880.1 37.190 242 134 6 236 469 219 450 1.49e-43 159
Msa1142310 AT5G05890.1 26.349 482 298 13 8 469 10 454 1.85e-43 159
Msa1142310 AT1G01420.2 27.521 476 275 14 2 445 7 444 2.66e-43 159
Msa1142310 AT1G01420.1 27.521 476 275 14 2 445 4 441 3.00e-43 159
Msa1142310 AT2G36770.1 26.535 505 284 19 6 460 14 481 5.32e-43 159
Msa1142310 AT4G14090.1 25.833 480 297 14 5 464 12 452 8.47e-43 157
Msa1142310 AT2G23260.1 23.868 486 300 11 6 465 10 451 1.27e-42 157
Msa1142310 AT1G22370.1 37.500 232 121 5 200 412 24 250 1.34e-42 153
Msa1142310 AT3G53160.1 25.941 505 295 16 6 464 8 479 2.69e-42 157
Msa1142310 AT2G36800.1 26.772 508 280 21 6 460 12 480 8.92e-42 155
Msa1142310 AT4G15480.1 26.044 503 292 18 6 469 19 480 1.79e-41 154
Msa1142310 AT2G36780.1 26.337 505 285 17 6 460 14 481 2.50e-41 154
Msa1142310 AT4G01070.1 26.752 471 280 13 5 445 7 442 2.91e-41 154
Msa1142310 AT4G34131.1 26.562 512 280 17 6 465 10 477 4.56e-41 153
Msa1142310 AT2G28080.1 26.708 483 290 20 10 464 22 468 1.09e-40 152
Msa1142310 AT2G36750.1 26.200 500 291 18 6 460 10 476 1.07e-39 149
Msa1142310 AT1G05530.1 26.220 492 293 15 5 467 4 454 4.03e-39 147
Msa1142310 AT2G30140.1 27.664 488 278 18 6 467 13 451 1.05e-38 146
Msa1142310 AT2G30140.2 27.664 488 277 18 6 467 13 450 1.69e-38 145
Msa1142310 AT4G34138.1 25.775 516 277 18 6 465 11 476 3.71e-38 145
Msa1142310 AT3G16520.3 33.945 218 135 4 256 464 239 456 5.22e-38 144
Msa1142310 AT2G30150.2 26.078 487 282 16 6 464 13 449 1.61e-37 143
Msa1142310 AT3G16520.2 35.533 197 118 4 256 443 239 435 3.75e-37 142
Msa1142310 AT3G16520.1 34.518 197 120 3 256 443 239 435 6.95e-37 141
Msa1142310 AT2G30150.1 25.926 486 276 16 10 464 1 433 1.83e-36 140
Msa1142310 AT4G34135.1 25.636 511 285 17 6 464 11 478 2.00e-36 140
Msa1142310 AT5G26310.1 25.144 521 280 18 5 467 6 474 2.81e-36 140
Msa1142310 AT2G36790.1 26.210 496 297 18 6 460 13 480 4.25e-36 140
Msa1142310 AT2G36760.1 32.819 259 138 8 236 460 225 481 7.70e-36 139
Msa1142310 AT1G01390.1 25.904 498 291 15 5 464 7 464 1.87e-35 137
Msa1142310 AT1G01390.2 26.358 497 290 16 5 464 24 481 2.47e-35 137
Msa1142310 AT5G66690.1 26.707 498 280 17 5 460 6 460 6.07e-35 136
Msa1142310 AT2G16890.2 24.949 493 284 13 6 457 9 456 2.21e-34 134
Msa1142310 AT1G07250.1 30.272 294 181 7 193 465 180 470 5.01e-34 134
Msa1142310 AT3G21790.1 30.909 275 161 6 222 467 204 478 1.14e-33 133
Msa1142310 AT2G16890.3 24.729 461 264 12 6 428 9 424 3.88e-33 130
Msa1142310 AT2G29750.1 23.387 496 310 10 6 464 8 470 7.10e-33 130
Msa1142310 AT3G50740.1 26.316 513 273 18 5 462 6 468 1.47e-32 129
Msa1142310 AT5G17050.1 31.224 237 152 4 238 467 224 456 1.48e-32 129
Msa1142310 AT4G15260.1 28.736 261 155 6 236 467 96 354 4.31e-32 126
Msa1142310 AT3G21760.1 23.922 510 307 13 6 467 4 480 5.54e-32 128
Msa1142310 AT3G53150.1 33.173 208 116 4 223 409 222 427 1.22e-31 127
Msa1142310 AT2G29740.1 24.341 493 310 13 6 464 8 471 1.44e-31 126
Msa1142310 AT3G21780.1 28.920 287 176 6 209 467 182 468 2.84e-31 125
Msa1142310 AT3G21800.1 29.278 263 154 6 236 467 214 475 3.84e-31 125
Msa1142310 AT2G29710.1 31.452 248 148 7 236 464 215 459 4.79e-31 125
Msa1142310 AT3G21750.1 22.555 501 313 12 6 467 4 468 5.65e-31 125
Msa1142310 AT5G49690.1 24.370 476 313 16 6 466 10 453 9.32e-31 124
Msa1142310 AT4G15280.1 28.244 262 156 7 236 467 214 473 3.10e-30 123
Msa1142310 AT4G15280.2 28.244 262 156 7 236 467 246 505 3.85e-30 123
Msa1142310 AT2G29730.1 30.522 249 148 8 236 464 216 459 4.33e-30 122
Msa1142310 AT5G14860.1 26.008 496 269 18 6 455 8 451 1.62e-29 121
Msa1142310 AT5G17040.2 29.545 220 146 4 253 467 122 337 3.03e-29 117
Msa1142310 AT2G18560.1 32.143 224 126 7 256 459 150 367 3.27e-29 118
Msa1142310 AT1G24100.1 32.323 198 123 3 277 467 265 458 4.98e-29 119
Msa1142310 AT5G17040.1 29.545 220 146 4 253 467 224 439 9.41e-29 118
Msa1142310 AT2G18570.1 24.468 470 288 17 5 443 4 437 1.19e-28 118
Msa1142310 AT4G36770.1 35.829 187 101 5 277 445 253 438 2.70e-28 117
Msa1142310 AT5G12890.1 23.108 502 310 16 6 464 10 478 3.08e-28 117
Msa1142310 AT1G73880.1 31.193 218 143 3 256 467 250 466 3.74e-28 117
Msa1142310 AT5G37950.1 25.676 370 242 9 21 384 1 343 4.49e-28 114
Msa1142310 AT1G07260.1 23.030 495 313 12 6 464 6 468 8.91e-28 115
Msa1142310 AT5G17030.1 30.769 195 129 3 253 445 240 430 1.16e-27 115
Msa1142310 AT5G03490.1 23.382 479 311 13 5 464 18 459 1.44e-27 115
Msa1142310 AT5G65550.1 23.377 462 281 16 6 436 9 428 5.10e-27 113
Msa1142310 AT1G10400.1 25.000 488 304 17 6 465 7 460 6.11e-27 113
Msa1142310 AT5G37950.2 40.299 134 75 2 256 384 204 337 1.47e-26 110
Msa1142310 AT1G30530.1 29.858 211 144 2 253 463 237 443 1.55e-26 112
Msa1142310 AT1G51210.1 26.859 417 239 15 5 401 19 389 1.50e-24 105
Msa1142310 AT4G27570.1 25.000 448 270 14 6 433 7 408 2.21e-24 105
Msa1142310 AT1G07240.1 26.599 297 196 8 190 464 176 472 2.24e-24 105
Msa1142310 AT5G54010.1 24.439 446 286 13 1 433 1 408 5.83e-24 104
Msa1142310 AT1G50580.1 24.638 483 305 14 1 468 1 439 5.97e-24 104
Msa1142310 AT5G53990.1 28.641 206 134 5 253 448 220 422 1.01e-23 103
Msa1142310 AT4G27560.1 31.056 161 106 3 278 433 248 408 7.05e-23 101
Msa1142310 AT1G06000.1 28.571 280 170 12 211 465 157 431 1.38e-22 100
Msa1142310 AT2G22930.1 29.032 186 124 4 253 433 220 402 3.48e-22 99.4
Msa1142310 AT1G64910.1 28.889 180 118 4 280 449 244 423 5.15e-22 98.6
Msa1142310 AT3G29630.1 29.680 219 146 6 253 464 220 437 1.56e-21 97.4
Msa1142310 AT4G09500.1 29.050 179 117 4 280 448 219 397 7.33e-21 95.1
Msa1142310 AT4G09500.2 29.050 179 117 4 280 448 244 422 9.01e-21 95.1
Msa1142310 AT3G29630.2 29.534 193 129 5 279 464 219 411 1.01e-20 94.7
Msa1142310 AT1G64920.1 29.878 164 106 3 280 434 244 407 6.76e-20 92.4
Msa1142310 AT2G22590.1 29.208 202 127 8 255 445 249 445 3.97e-18 87.0
Msa1142310 AT5G54060.1 31.868 182 114 5 258 432 248 426 1.74e-16 82.0
Msa1142310 AT4G01070.2 26.087 345 205 12 5 335 7 315 2.11e-16 80.9

Find 114 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGAAGTGGGACACAATT+TGG 0.153736 7_4:+16468069 Msa1142310:CDS
GATTGTCGCTACATTTAATA+TGG 0.167038 7_4:+16468039 Msa1142310:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7_4:-16469842 None:intergenic
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7_4:-16469679 None:intergenic
TAACACAACTAATAAACTTT+TGG 0.269673 7_4:-16470313 None:intergenic
ACAACAACAAAAGTTCATTT+TGG 0.269702 7_4:+16469724 Msa1142310:CDS
AGAAACTGATCAACTGAAAA+TGG 0.274470 7_4:-16470092 None:intergenic
ATATGTTTCCTTTGGTAGTA+TGG 0.280834 7_4:+16469803 Msa1142310:CDS
ATATCACTTCTATCATCTTC+AGG 0.296209 7_4:-16467917 None:intergenic
GTGTCTATCATAGGTATATC+AGG 0.310349 7_4:-16469528 None:intergenic
TTACTTCCATGGAAATCATT+TGG 0.311022 7_4:-16469939 None:intergenic
CGCTACATTTAATATGGGTT+GGG 0.326531 7_4:+16468045 Msa1142310:CDS
GAGATACAAACTATAAAGTT+TGG 0.331675 7_4:+16469606 Msa1142310:CDS
ATTTAATATGGGTTGGGCTT+TGG 0.340556 7_4:+16468051 Msa1142310:CDS
AAATTTGTTGTGTCTATCAT+AGG 0.354442 7_4:-16469537 None:intergenic
ACCAACATGTACACCTTCTA+TGG 0.354994 7_4:-16470051 None:intergenic
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7_4:-16469836 None:intergenic
AGTGACCTTGCAACCATGTT+TGG 0.359865 7_4:-16467801 None:intergenic
TTGGAAGTGGGACACAATTT+GGG 0.363607 7_4:+16468070 Msa1142310:CDS
AAGATACAACTTGCTTAGAT+TGG 0.363758 7_4:+16469751 Msa1142310:CDS
TTAACATCTTCTATAAGCTT+TGG 0.364725 7_4:-16467986 None:intergenic
TACTTCCATGGAAATCATTT+GGG 0.367161 7_4:-16469938 None:intergenic
ACATGTCCTTGAACTGGATA+TGG 0.367225 7_4:-16467746 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.375277 7_4:+16469695 Msa1142310:CDS
CCCATCCTCAATATAAGTTT+AGG 0.384235 7_4:-16468154 None:intergenic
GAAAATGGCCAACACAATAA+AGG 0.384419 7_4:-16470077 None:intergenic
AACCATAAACGATCGAAAAC+TGG 0.397250 7_4:+16467842 Msa1142310:CDS
TCTTCAGGCTCCAAACCATC+TGG 0.398364 7_4:-16467902 None:intergenic
TCGTCCTAGTAATGACAATA+AGG 0.399447 7_4:+16469902 Msa1142310:CDS
TAAAGGTAAAATTGTTGGTT+GGG 0.403052 7_4:+16469959 Msa1142310:CDS
GAATTAGAGAAAGATGATAA+TGG 0.405064 7_4:+16470155 Msa1142310:CDS
AGTTGGTGATGATGATATAA+AGG 0.407151 7_4:+16470220 Msa1142310:CDS
TCCAGCTTCTGCCACTACTT+TGG 0.407318 7_4:+16468114 Msa1142310:CDS
ATTTGTGATGTGTGGAAGAC+TGG 0.417376 7_4:+16470128 Msa1142310:CDS
CTTTGGTAGTATGGTAGTAA+TGG 0.420468 7_4:+16469812 Msa1142310:CDS
TCGCTACATTTAATATGGGT+TGG 0.423578 7_4:+16468044 Msa1142310:CDS
TCTGTCATATATGTTTCCTT+TGG 0.423583 7_4:+16469795 Msa1142310:CDS
GGTGACACTCCCAGATGGTT+TGG 0.431583 7_4:+16467892 Msa1142310:CDS
ATCTTATCTACGCCGCGCCA+TGG 0.433882 7_4:-16469561 None:intergenic
TGTCTAGAAGCTCAAGTCCT+AGG 0.436501 7_4:-16469860 None:intergenic
TATGGGTTGGGCTTTGGAAG+TGG 0.440483 7_4:+16468057 Msa1142310:CDS
GTTATACCATATCCAGTTCA+AGG 0.444945 7_4:+16467740 Msa1142310:CDS
GGAAGTAAAGGTAAAATTGT+TGG 0.450567 7_4:+16469954 Msa1142310:CDS
CTTGCCATCAATGGACCAAT+TGG 0.451649 7_4:-16469699 None:intergenic
GGGTTAACATGTCCTTGAAC+TGG 0.455156 7_4:-16467752 None:intergenic
GGATGGAATTCTACCATAGA+AGG 0.456157 7_4:+16470038 Msa1142310:CDS
AACTTGTGAGAATTGCATAA+GGG 0.457199 7_4:-16467774 None:intergenic
GGACCAATTGGTAGGAACTT+TGG 0.458930 7_4:-16469687 None:intergenic
CCCCGTGACCTTAGCTCAGT+TGG 0.460202 7_4:+16468649 Msa1142310:CDS
TTGTTGTTACTTGCCATCAA+TGG 0.465689 7_4:-16469708 None:intergenic
TCACCAAAGTTCCTACCAAT+TGG 0.467404 7_4:+16469684 Msa1142310:CDS
GCCAAAGTAGTGGCAGAAGC+TGG 0.470607 7_4:-16468115 None:intergenic
ATTGTCGCTACATTTAATAT+GGG 0.478228 7_4:+16468040 Msa1142310:CDS
AATGATTTCCATGGAAGTAA+AGG 0.480314 7_4:+16469942 Msa1142310:CDS
TTGGTGTACCTTTATTGTGT+TGG 0.480614 7_4:+16470069 Msa1142310:CDS
ATGTTGACAACAATATCAAA+TGG 0.484231 7_4:+16468017 Msa1142310:CDS
TCTATAAGCTTTGGAAGTCT+AGG 0.486772 7_4:-16467977 None:intergenic
CACTTGTATCTTGTCTTGCT+CGG 0.488719 7_4:-16467870 None:intergenic
TTTACCTTATTGTCATTACT+AGG 0.497913 7_4:-16469906 None:intergenic
ATGGGTTGGGCTTTGGAAGT+GGG 0.498017 7_4:+16468058 Msa1142310:CDS
GTAAAGGTAAAATTGTTGGT+TGG 0.498069 7_4:+16469958 Msa1142310:CDS
ACCTAAACTTATATTGAGGA+TGG 0.498250 7_4:+16468153 Msa1142310:CDS
GAACTTGTGAGAATTGCATA+AGG 0.502829 7_4:-16467775 None:intergenic
GGACACAATTTGGGAATCAA+AGG 0.510394 7_4:+16468079 Msa1142310:CDS
ATCATTAGTAATATAGAAGA+AGG 0.512008 7_4:+16470269 Msa1142310:CDS
GGACGAACAACCCAAAGAAA+AGG 0.516602 7_4:-16469885 None:intergenic
TGACCTTAGCTCAGTTGGTA+AGG 0.519836 7_4:+16468654 Msa1142310:CDS
GCATACCCAAATGATTTCCA+TGG 0.529645 7_4:+16469933 Msa1142310:CDS
AAGAAGGTGGATCAACTAGT+TGG 0.531619 7_4:+16470203 Msa1142310:CDS
GAAACATATATGACAGATTG+AGG 0.532322 7_4:-16469789 None:intergenic
ACCAACTGAGCTAAGGTCAC+GGG 0.533017 7_4:-16468650 None:intergenic
GTCTAGAAGCTCAAGTCCTA+GGG 0.544665 7_4:-16469859 None:intergenic
GATGGGATTATTGATTCTGC+AGG 0.547238 7_4:+16468171 Msa1142310:CDS
CTTCAGGCTCCAAACCATCT+GGG 0.548351 7_4:-16467901 None:intergenic
CCTAAACTTATATTGAGGAT+GGG 0.554788 7_4:+16468154 Msa1142310:CDS
GCTTCATAAGTCATTGTGGA+TGG 0.554894 7_4:+16470021 Msa1142310:CDS
AAGGCAAGAGATAAAGAAGA+AGG 0.556338 7_4:+16470187 Msa1142310:CDS
GACACAATTTGGGAATCAAA+GGG 0.557360 7_4:+16468080 Msa1142310:CDS
ACCATAGAAGGTGTACATGT+TGG 0.563384 7_4:+16470050 Msa1142310:CDS
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7_4:+16469648 Msa1142310:CDS
TGTCTATCATAGGTATATCA+GGG 0.572365 7_4:-16469527 None:intergenic
GCATACCTAAACTTATATTG+AGG 0.575291 7_4:+16468149 Msa1142310:CDS
TGTCCTTACCAACTGAGCTA+AGG 0.575444 7_4:-16468657 None:intergenic
GACAATGCATAATATATGCA+AGG 0.586470 7_4:+16468676 Msa1142310:CDS
CTTTGGAAGTCTAGGAGGCA+TGG 0.591674 7_4:-16467969 None:intergenic
CAATTTAATGAACTAGCCCT+AGG 0.592472 7_4:+16469843 Msa1142310:CDS
GACAGCACAAGCCAAAGTAG+TGG 0.593369 7_4:-16468125 None:intergenic
CATTACTACCATACTACCAA+AGG 0.593449 7_4:-16469811 None:intergenic
TATGGTATAACAAGAAAATG+TGG 0.598798 7_4:-16467728 None:intergenic
AATCGTATATTTGTGATGTG+TGG 0.599221 7_4:+16470120 Msa1142310:CDS
GCAAGAGATAAAGAAGAAGG+TGG 0.602358 7_4:+16470190 Msa1142310:CDS
ATAAGCTTTGGAAGTCTAGG+AGG 0.602780 7_4:-16467974 None:intergenic
CTTATGAAGCAAGCAATCGC+GGG 0.607846 7_4:-16470008 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.610498 7_4:-16469695 None:intergenic
ACTTGTGAGAATTGCATAAG+GGG 0.611094 7_4:-16467773 None:intergenic
ACTTATGAAGCAAGCAATCG+CGG 0.612989 7_4:-16470009 None:intergenic
TCACAAGTTCTAGCCAAACA+TGG 0.613083 7_4:+16467788 Msa1142310:CDS
TGAAGCAAGCAATCGCGGGA+TGG 0.615584 7_4:-16470004 None:intergenic
TACCAACTGAGCTAAGGTCA+CGG 0.615823 7_4:-16468651 None:intergenic
GCTTGCTTCATAAGTCATTG+TGG 0.617234 7_4:+16470017 Msa1142310:CDS
TCTAGCCAAACATGGTTGCA+AGG 0.620565 7_4:+16467796 Msa1142310:CDS
AAACTATAAAGTTTGGAGAA+CGG 0.621516 7_4:+16469613 Msa1142310:CDS
GGTGATATGGAAAATACACC+AGG 0.626519 7_4:-16469666 None:intergenic
CGAGCAAGACAAGATACAAG+TGG 0.649951 7_4:+16467871 Msa1142310:CDS
CTATAAAGTTTGGAGAACGG+TGG 0.661197 7_4:+16469616 Msa1142310:CDS
CTTGTGAGAATTGCATAAGG+GGG 0.662045 7_4:-16467772 None:intergenic
ATTAGTAATATAGAAGAAGG+TGG 0.662213 7_4:+16470272 Msa1142310:CDS
CAAGTGGTGACACTCCCAGA+TGG 0.666396 7_4:+16467887 Msa1142310:CDS
ACACAATTTGGGAATCAAAG+GGG 0.672957 7_4:+16468081 Msa1142310:CDS
ACAACAAATTTCCCATGGCG+CGG 0.675013 7_4:+16469549 Msa1142310:CDS
CATAATATATGCAAGGTCCG+AGG 0.678064 7_4:+16468683 Msa1142310:CDS
CCAACTGAGCTAAGGTCACG+GGG 0.679388 7_4:-16468649 None:intergenic
GTCTATCATAGGTATATCAG+GGG 0.680090 7_4:-16469526 None:intergenic
TAGACACAACAAATTTCCCA+TGG 0.689856 7_4:+16469544 Msa1142310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTCACAAATAAATTTTT+TGG + chr7_4:16468222-16468241 Msa1142310:intron 10.0%
!! CATTTCATATTTCATAAATA+AGG - chr7_4:16468318-16468337 None:intergenic 15.0%
!!! AATGTTGTTCAATAAAATTT+TGG + chr7_4:16468739-16468758 Msa1142310:intron 15.0%
!!! ATGTTGTTCAATAAAATTTT+GGG + chr7_4:16468740-16468759 Msa1142310:intron 15.0%
!! AAACAGAAAATTACTAAAAT+TGG + chr7_4:16469217-16469236 Msa1142310:intron 15.0%
!! AACAGAAAATTACTAAAATT+GGG + chr7_4:16469218-16469237 Msa1142310:intron 15.0%
!! AAATACTATAGAAAATACTA+TGG + chr7_4:16469250-16469269 Msa1142310:intron 15.0%
!! TAAACACAAATCATAAATAA+TGG - chr7_4:16469381-16469400 None:intergenic 15.0%
!!! TTTCCAATACTTTTTTTTGA+GGG - chr7_4:16468477-16468496 None:intergenic 20.0%
!!! TTTTCCAATACTTTTTTTTG+AGG - chr7_4:16468478-16468497 None:intergenic 20.0%
!! AATGAATAAAAGTTTCTCTT+AGG + chr7_4:16469126-16469145 Msa1142310:intron 20.0%
!!! TTGTTTCAGTTTGTTATTTT+TGG - chr7_4:16469198-16469217 None:intergenic 20.0%
!! AACTACAACTATTGTTTAAT+AGG + chr7_4:16469317-16469336 Msa1142310:intron 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG - chr7_4:16469505-16469524 None:intergenic 20.0%
!!! ATGATAATGGTTTTATATCA+AGG + chr7_4:16470168-16470187 Msa1142310:CDS 20.0%
!! ATCATTAGTAATATAGAAGA+AGG + chr7_4:16470269-16470288 Msa1142310:CDS 20.0%
!!! TAACACAACTAATAAACTTT+TGG - chr7_4:16470316-16470335 None:intergenic 20.0%
! TATGGTATAACAAGAAAATG+TGG - chr7_4:16467731-16467750 None:intergenic 25.0%
! TTAACATCTTCTATAAGCTT+TGG - chr7_4:16467989-16468008 None:intergenic 25.0%
! ATGTTGACAACAATATCAAA+TGG + chr7_4:16468017-16468036 Msa1142310:CDS 25.0%
! ATTGTCGCTACATTTAATAT+GGG + chr7_4:16468040-16468059 Msa1142310:CDS 25.0%
!! TTTGGAATAGAATTCCATAA+AGG + chr7_4:16468240-16468259 Msa1142310:intron 25.0%
! TGAACAATAAACTACCTTTA+TGG - chr7_4:16468257-16468276 None:intergenic 25.0%
! AAGGAAAGTTCATACAATTA+TGG - chr7_4:16468299-16468318 None:intergenic 25.0%
!! TTTCCCTCAAAAAAAAGTAT+TGG + chr7_4:16468471-16468490 Msa1142310:intron 25.0%
!!! ACATTCTGCTTTTTTTTTTG+TGG - chr7_4:16468724-16468743 None:intergenic 25.0%
!! ATATACTTTTGAACCAGAAT+GGG - chr7_4:16468943-16468962 None:intergenic 25.0%
!! AATATACTTTTGAACCAGAA+TGG - chr7_4:16468944-16468963 None:intergenic 25.0%
!! TAGAGAGTTTTCTTAATTTC+TGG - chr7_4:16469095-16469114 None:intergenic 25.0%
!!! TTGTTATTTTTGGTCCATTA+GGG - chr7_4:16469188-16469207 None:intergenic 25.0%
!!! TTTGTTATTTTTGGTCCATT+AGG - chr7_4:16469189-16469208 None:intergenic 25.0%
!!! TGAATTTCTTGTTTTTTGGT+GGG - chr7_4:16469501-16469520 None:intergenic 25.0%
!!! TTGAATTTCTTGTTTTTTGG+TGG - chr7_4:16469502-16469521 None:intergenic 25.0%
!!! AAATTTGTTGTGTCTATCAT+AGG - chr7_4:16469540-16469559 None:intergenic 25.0%
! GAGATACAAACTATAAAGTT+TGG + chr7_4:16469606-16469625 Msa1142310:CDS 25.0%
! AAACTATAAAGTTTGGAGAA+CGG + chr7_4:16469613-16469632 Msa1142310:CDS 25.0%
!! ACAACAACAAAAGTTCATTT+TGG + chr7_4:16469724-16469743 Msa1142310:CDS 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG - chr7_4:16469839-16469858 None:intergenic 25.0%
! TTTACCTTATTGTCATTACT+AGG - chr7_4:16469909-16469928 None:intergenic 25.0%
!! TAAAGGTAAAATTGTTGGTT+GGG + chr7_4:16469959-16469978 Msa1142310:CDS 25.0%
! GAATTAGAGAAAGATGATAA+TGG + chr7_4:16470155-16470174 Msa1142310:CDS 25.0%
! ATTAGTAATATAGAAGAAGG+TGG + chr7_4:16470272-16470291 Msa1142310:CDS 25.0%
AACTTGTGAGAATTGCATAA+GGG - chr7_4:16467777-16467796 None:intergenic 30.0%
ATATCACTTCTATCATCTTC+AGG - chr7_4:16467920-16467939 None:intergenic 30.0%
GATTGTCGCTACATTTAATA+TGG + chr7_4:16468039-16468058 Msa1142310:CDS 30.0%
GCATACCTAAACTTATATTG+AGG + chr7_4:16468149-16468168 Msa1142310:CDS 30.0%
ACCTAAACTTATATTGAGGA+TGG + chr7_4:16468153-16468172 Msa1142310:CDS 30.0%
CCTAAACTTATATTGAGGAT+GGG + chr7_4:16468154-16468173 Msa1142310:CDS 30.0%
ATGTAACAACATTCTGCTTT+AGG - chr7_4:16468616-16468635 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + chr7_4:16468676-16468695 Msa1142310:CDS 30.0%
!! ATTTTGGGAATCAGATCAAA+TGG + chr7_4:16468755-16468774 Msa1142310:intron 30.0%
ATGATTGATAGACATAGAAG+AGG + chr7_4:16468878-16468897 Msa1142310:intron 30.0%
TGATTGATAGACATAGAAGA+GGG + chr7_4:16468879-16468898 Msa1142310:intron 30.0%
! TATACTTTTGAACCAGAATG+GGG - chr7_4:16468942-16468961 None:intergenic 30.0%
ACTATATATATTGACGCAGT+CGG + chr7_4:16468982-16469001 Msa1142310:intron 30.0%
!! AGAGTTTTCTTAATTTCTGG+TGG - chr7_4:16469092-16469111 None:intergenic 30.0%
TATATCACTTGAGTGAATGA+AGG - chr7_4:16469292-16469311 None:intergenic 30.0%
TGTCTATCATAGGTATATCA+GGG - chr7_4:16469530-16469549 None:intergenic 30.0%
! AAGATACAACTTGCTTAGAT+TGG + chr7_4:16469751-16469770 Msa1142310:CDS 30.0%
GAAACATATATGACAGATTG+AGG - chr7_4:16469792-16469811 None:intergenic 30.0%
TCTGTCATATATGTTTCCTT+TGG + chr7_4:16469795-16469814 Msa1142310:CDS 30.0%
! ATATGTTTCCTTTGGTAGTA+TGG + chr7_4:16469803-16469822 Msa1142310:CDS 30.0%
TACTTCCATGGAAATCATTT+GGG - chr7_4:16469941-16469960 None:intergenic 30.0%
TTACTTCCATGGAAATCATT+TGG - chr7_4:16469942-16469961 None:intergenic 30.0%
AATGATTTCCATGGAAGTAA+AGG + chr7_4:16469942-16469961 Msa1142310:CDS 30.0%
! CAATTTTACCTTTACTTCCA+TGG - chr7_4:16469953-16469972 None:intergenic 30.0%
GGAAGTAAAGGTAAAATTGT+TGG + chr7_4:16469954-16469973 Msa1142310:CDS 30.0%
GTAAAGGTAAAATTGTTGGT+TGG + chr7_4:16469958-16469977 Msa1142310:CDS 30.0%
! TGGTTCAAGATTTTACTTTG+TGG - chr7_4:16469987-16470006 None:intergenic 30.0%
AGAAACTGATCAACTGAAAA+TGG - chr7_4:16470095-16470114 None:intergenic 30.0%
AATCGTATATTTGTGATGTG+TGG + chr7_4:16470120-16470139 Msa1142310:CDS 30.0%
!! AGTTGGTGATGATGATATAA+AGG + chr7_4:16470220-16470239 Msa1142310:CDS 30.0%
GTTATACCATATCCAGTTCA+AGG + chr7_4:16467740-16467759 Msa1142310:CDS 35.0%
ACTTGTGAGAATTGCATAAG+GGG - chr7_4:16467776-16467795 None:intergenic 35.0%
GAACTTGTGAGAATTGCATA+AGG - chr7_4:16467778-16467797 None:intergenic 35.0%
AACCATAAACGATCGAAAAC+TGG + chr7_4:16467842-16467861 Msa1142310:CDS 35.0%
!! TCTATAAGCTTTGGAAGTCT+AGG - chr7_4:16467980-16467999 None:intergenic 35.0%
TCGCTACATTTAATATGGGT+TGG + chr7_4:16468044-16468063 Msa1142310:CDS 35.0%
CGCTACATTTAATATGGGTT+GGG + chr7_4:16468045-16468064 Msa1142310:CDS 35.0%
!! ATTTAATATGGGTTGGGCTT+TGG + chr7_4:16468051-16468070 Msa1142310:CDS 35.0%
GACACAATTTGGGAATCAAA+GGG + chr7_4:16468080-16468099 Msa1142310:CDS 35.0%
ACACAATTTGGGAATCAAAG+GGG + chr7_4:16468081-16468100 Msa1142310:CDS 35.0%
CCCATCCTCAATATAAGTTT+AGG - chr7_4:16468157-16468176 None:intergenic 35.0%
!! AACATTCTGCTTTAGGATTG+AGG - chr7_4:16468609-16468628 None:intergenic 35.0%
!!! CTTTTTTTTTTGTGGTGTCC+GGG - chr7_4:16468716-16468735 None:intergenic 35.0%
!!! GCTTTTTTTTTTGTGGTGTC+CGG - chr7_4:16468717-16468736 None:intergenic 35.0%
AGCGACAAACTTGTGAAAAT+AGG + chr7_4:16469056-16469075 Msa1142310:intron 35.0%
GCGACAAACTTGTGAAAATA+GGG + chr7_4:16469057-16469076 Msa1142310:intron 35.0%
AACTTGTGAAAATAGGGTTC+CGG + chr7_4:16469063-16469082 Msa1142310:intron 35.0%
!! TCTTAATTTCTGGTGGATTC+CGG - chr7_4:16469085-16469104 None:intergenic 35.0%
TGCAACTCTTAAGCTTAAAC+AGG + chr7_4:16469150-16469169 Msa1142310:intron 35.0%
GCAACTCTTAAGCTTAAACA+GGG + chr7_4:16469151-16469170 Msa1142310:intron 35.0%
GGGAAATAACAAAACCCTAA+TGG + chr7_4:16469171-16469190 Msa1142310:intron 35.0%
TGAGTGAATGAAGGTTTACA+AGG - chr7_4:16469283-16469302 None:intergenic 35.0%
GTCTATCATAGGTATATCAG+GGG - chr7_4:16469529-16469548 None:intergenic 35.0%
GTGTCTATCATAGGTATATC+AGG - chr7_4:16469531-16469550 None:intergenic 35.0%
TAGACACAACAAATTTCCCA+TGG + chr7_4:16469544-16469563 Msa1142310:CDS 35.0%
! TTGTTGTTACTTGCCATCAA+TGG - chr7_4:16469711-16469730 None:intergenic 35.0%
CATTACTACCATACTACCAA+AGG - chr7_4:16469814-16469833 None:intergenic 35.0%
! CTTTGGTAGTATGGTAGTAA+TGG + chr7_4:16469812-16469831 Msa1142310:CDS 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG - chr7_4:16469845-16469864 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG + chr7_4:16469843-16469862 Msa1142310:CDS 35.0%
! TTCTAGACAAGCCTTTTCTT+TGG + chr7_4:16469874-16469893 Msa1142310:CDS 35.0%
! TCTAGACAAGCCTTTTCTTT+GGG + chr7_4:16469875-16469894 Msa1142310:CDS 35.0%
TCGTCCTAGTAATGACAATA+AGG + chr7_4:16469902-16469921 Msa1142310:CDS 35.0%
TTGGTGTACCTTTATTGTGT+TGG + chr7_4:16470069-16470088 Msa1142310:CDS 35.0%
GAAAATGGCCAACACAATAA+AGG - chr7_4:16470080-16470099 None:intergenic 35.0%
AAGGCAAGAGATAAAGAAGA+AGG + chr7_4:16470187-16470206 Msa1142310:CDS 35.0%
ACATGTCCTTGAACTGGATA+TGG - chr7_4:16467749-16467768 None:intergenic 40.0%
CTTGTGAGAATTGCATAAGG+GGG - chr7_4:16467775-16467794 None:intergenic 40.0%
! TCACAAGTTCTAGCCAAACA+TGG + chr7_4:16467788-16467807 Msa1142310:CDS 40.0%
! CACCAGTTTTCGATCGTTTA+TGG - chr7_4:16467847-16467866 None:intergenic 40.0%
CACTTGTATCTTGTCTTGCT+CGG - chr7_4:16467873-16467892 None:intergenic 40.0%
!! ATAAGCTTTGGAAGTCTAGG+AGG - chr7_4:16467977-16467996 None:intergenic 40.0%
TTTGGAAGTGGGACACAATT+TGG + chr7_4:16468069-16468088 Msa1142310:CDS 40.0%
TTGGAAGTGGGACACAATTT+GGG + chr7_4:16468070-16468089 Msa1142310:CDS 40.0%
GGACACAATTTGGGAATCAA+AGG + chr7_4:16468079-16468098 Msa1142310:CDS 40.0%
!! GATGGGATTATTGATTCTGC+AGG + chr7_4:16468171-16468190 Msa1142310:CDS 40.0%
CATAATATATGCAAGGTCCG+AGG + chr7_4:16468683-16468702 Msa1142310:CDS 40.0%
TGATAGACATAGAAGAGGGA+AGG + chr7_4:16468883-16468902 Msa1142310:intron 40.0%
GATAGACATAGAAGAGGGAA+GGG + chr7_4:16468884-16468903 Msa1142310:intron 40.0%
ATAGACATAGAAGAGGGAAG+GGG + chr7_4:16468885-16468904 Msa1142310:intron 40.0%
CTATAAAGTTTGGAGAACGG+TGG + chr7_4:16469616-16469635 Msa1142310:CDS 40.0%
GGTGATATGGAAAATACACC+AGG - chr7_4:16469669-16469688 None:intergenic 40.0%
! TGGTAGGAACTTTGGTGATA+TGG - chr7_4:16469682-16469701 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG + chr7_4:16469684-16469703 Msa1142310:CDS 40.0%
GCATACCCAAATGATTTCCA+TGG + chr7_4:16469933-16469952 Msa1142310:CDS 40.0%
ACTTATGAAGCAAGCAATCG+CGG - chr7_4:16470012-16470031 None:intergenic 40.0%
GCTTGCTTCATAAGTCATTG+TGG + chr7_4:16470017-16470036 Msa1142310:CDS 40.0%
GCTTCATAAGTCATTGTGGA+TGG + chr7_4:16470021-16470040 Msa1142310:CDS 40.0%
GGATGGAATTCTACCATAGA+AGG + chr7_4:16470038-16470057 Msa1142310:CDS 40.0%
! ACCATAGAAGGTGTACATGT+TGG + chr7_4:16470050-16470069 Msa1142310:CDS 40.0%
ACCAACATGTACACCTTCTA+TGG - chr7_4:16470054-16470073 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGAC+TGG + chr7_4:16470128-16470147 Msa1142310:CDS 40.0%
GCAAGAGATAAAGAAGAAGG+TGG + chr7_4:16470190-16470209 Msa1142310:CDS 40.0%
AAGAAGGTGGATCAACTAGT+TGG + chr7_4:16470203-16470222 Msa1142310:CDS 40.0%
GGGTTAACATGTCCTTGAAC+TGG - chr7_4:16467755-16467774 None:intergenic 45.0%
TCTAGCCAAACATGGTTGCA+AGG + chr7_4:16467796-16467815 Msa1142310:CDS 45.0%
AGTGACCTTGCAACCATGTT+TGG - chr7_4:16467804-16467823 None:intergenic 45.0%
CGAGCAAGACAAGATACAAG+TGG + chr7_4:16467871-16467890 Msa1142310:CDS 45.0%
TACCAACTGAGCTAAGGTCA+CGG - chr7_4:16468654-16468673 None:intergenic 45.0%
! TGACCTTAGCTCAGTTGGTA+AGG + chr7_4:16468654-16468673 Msa1142310:CDS 45.0%
TGTCCTTACCAACTGAGCTA+AGG - chr7_4:16468660-16468679 None:intergenic 45.0%
ACAACAAATTTCCCATGGCG+CGG + chr7_4:16469549-16469568 Msa1142310:CDS 45.0%
ACTGCTTATGATCTTGAGCC+TGG + chr7_4:16469648-16469667 Msa1142310:CDS 45.0%
GGACCAATTGGTAGGAACTT+TGG - chr7_4:16469690-16469709 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG - chr7_4:16469698-16469717 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG + chr7_4:16469695-16469714 Msa1142310:CDS 45.0%
CTTGCCATCAATGGACCAAT+TGG - chr7_4:16469702-16469721 None:intergenic 45.0%
GTCTAGAAGCTCAAGTCCTA+GGG - chr7_4:16469862-16469881 None:intergenic 45.0%
TGTCTAGAAGCTCAAGTCCT+AGG - chr7_4:16469863-16469882 None:intergenic 45.0%
GGACGAACAACCCAAAGAAA+AGG - chr7_4:16469888-16469907 None:intergenic 45.0%
CTTATGAAGCAAGCAATCGC+GGG - chr7_4:16470011-16470030 None:intergenic 45.0%
!!! NNNNNNNTTTATTTTAGTAT+TGG + chr7_4:16468441-16468460 Msa1142310:intron 5.0%
CTTCAGGCTCCAAACCATCT+GGG - chr7_4:16467904-16467923 None:intergenic 50.0%
TCTTCAGGCTCCAAACCATC+TGG - chr7_4:16467905-16467924 None:intergenic 50.0%
! CTTTGGAAGTCTAGGAGGCA+TGG - chr7_4:16467972-16467991 None:intergenic 50.0%
!! TATGGGTTGGGCTTTGGAAG+TGG + chr7_4:16468057-16468076 Msa1142310:CDS 50.0%
!! ATGGGTTGGGCTTTGGAAGT+GGG + chr7_4:16468058-16468077 Msa1142310:CDS 50.0%
TCCAGCTTCTGCCACTACTT+TGG + chr7_4:16468114-16468133 Msa1142310:CDS 50.0%
GACAGCACAAGCCAAAGTAG+TGG - chr7_4:16468128-16468147 None:intergenic 50.0%
ACCAACTGAGCTAAGGTCAC+GGG - chr7_4:16468653-16468672 None:intergenic 50.0%
! CGATCTCCTTTTCGCATTGC+AGG + chr7_4:16469471-16469490 Msa1142310:intron 50.0%
GGATTGCCTGCAATGCGAAA+AGG - chr7_4:16469480-16469499 None:intergenic 50.0%
CAAGTGGTGACACTCCCAGA+TGG + chr7_4:16467887-16467906 Msa1142310:CDS 55.0%
GGTGACACTCCCAGATGGTT+TGG + chr7_4:16467892-16467911 Msa1142310:CDS 55.0%
GCCAAAGTAGTGGCAGAAGC+TGG - chr7_4:16468118-16468137 None:intergenic 55.0%
CCAACTGAGCTAAGGTCACG+GGG - chr7_4:16468652-16468671 None:intergenic 55.0%
AAGGTCCGAGGTTCGAATCC+CGG + chr7_4:16468695-16468714 Msa1142310:intron 55.0%
! ATAGAAGAGGGAAGGGGCGT+GGG + chr7_4:16468891-16468910 Msa1142310:intron 55.0%
AGCAGTGCAAAGCCCCATTC+TGG + chr7_4:16468927-16468946 Msa1142310:intron 55.0%
! ATTGACGCAGTCGGAAGCGT+AGG + chr7_4:16468991-16469010 Msa1142310:intron 55.0%
! TCGGAAGCGTAGGCTAGCAA+GGG + chr7_4:16469001-16469020 Msa1142310:intron 55.0%
TCTTATCTACGCCGCGCCAT+GGG - chr7_4:16469563-16469582 None:intergenic 55.0%
ATCTTATCTACGCCGCGCCA+TGG - chr7_4:16469564-16469583 None:intergenic 55.0%
TGAAGCAAGCAATCGCGGGA+TGG - chr7_4:16470007-16470026 None:intergenic 55.0%
CCCCGTGACCTTAGCTCAGT+TGG + chr7_4:16468649-16468668 Msa1142310:CDS 60.0%
GGTGTCCGGGATTCGAACCT+CGG - chr7_4:16468703-16468722 None:intergenic 60.0%
CATAGAAGAGGGAAGGGGCG+TGG + chr7_4:16468890-16468909 Msa1142310:intron 60.0%
! GTCGGAAGCGTAGGCTAGCA+AGG + chr7_4:16469000-16469019 Msa1142310:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 16467716 16470343 16467716 ID=Msa1142310;Name=Msa1142310
chr7_4 mRNA 16467716 16470343 16467716 ID=Msa1142310-mRNA-1;Parent=Msa1142310;Name=Msa1142310-mRNA-1;_AED=0.03;_eAED=0.05;_QI=0|0|0|0.66|1|1|3|0|469
chr7_4 exon 16467716 16468192 16467716 ID=Msa1142310-mRNA-1:exon:3702;Parent=Msa1142310-mRNA-1
chr7_4 exon 16468623 16468704 16468623 ID=Msa1142310-mRNA-1:exon:3703;Parent=Msa1142310-mRNA-1
chr7_4 exon 16469493 16470343 16469493 ID=Msa1142310-mRNA-1:exon:3704;Parent=Msa1142310-mRNA-1
chr7_4 CDS 16467716 16468192 16467716 ID=Msa1142310-mRNA-1:cds;Parent=Msa1142310-mRNA-1
chr7_4 CDS 16468623 16468704 16468623 ID=Msa1142310-mRNA-1:cds;Parent=Msa1142310-mRNA-1
chr7_4 CDS 16469493 16470343 16469493 ID=Msa1142310-mRNA-1:cds;Parent=Msa1142310-mRNA-1
Gene Sequence

>Msa1142310

ATGGGTGTATTGCCACATTTTCTTGTTATACCATATCCAGTTCAAGGACATGTTAACCCCCTTATGCAATTCTCACAAGTTCTAGCCAAACATGGTTGCAAGGTCACTTTTCTACATACTGAGTTTAACCATAAACGATCGAAAACTGGTGTTTCCGAGCAAGACAAGATACAAGTGGTGACACTCCCAGATGGTTTGGAGCCTGAAGATGATAGAAGTGATATAAAGAAAGTTCTTTTTTCAATTAAAAGTACCATGCCTCCTAGACTTCCAAAGCTTATAGAAGATGTTAATGCTTTGAATGTTGACAACAATATCAAATGGATTGTCGCTACATTTAATATGGGTTGGGCTTTGGAAGTGGGACACAATTTGGGAATCAAAGGGGCTCTACTTTTTCCAGCTTCTGCCACTACTTTGGCTTGTGCTGTCTGCATACCTAAACTTATATTGAGGATGGGATTATTGATTCTGCAGAATGTTGTTACATCAATGTTGTTTGTCCCCGTGACCTTAGCTCAGTTGGTAAGGACAATGCATAATATATGCAAGGTCCGAGGCAATCCCACCAAAAAACAAGAAATTCAAATCTCCCCTGATATACCTATGATAGACACAACAAATTTCCCATGGCGCGGCGTAGATAAGATGTTATTTGATCATTTTGTGCAAGAGATACAAACTATAAAGTTTGGAGAACGGTGGCTTTGCAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATATCACCAAAGTTCCTACCAATTGGTCCATTGATGGCAAGTAACAACAACAAAAGTTCATTTTGGCAAGAAGATACAACTTGCTTAGATTGGTTGAATAATCAAGCACCTCAATCTGTCATATATGTTTCCTTTGGTAGTATGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGAGCTTCTAGACAAGCCTTTTCTTTGGGTTGTTCGTCCTAGTAATGACAATAAGGTAAACTATGCATACCCAAATGATTTCCATGGAAGTAAAGGTAAAATTGTTGGTTGGGCACCACAAAGTAAAATCTTGAACCATCCCGCGATTGCTTGCTTCATAAGTCATTGTGGATGGAATTCTACCATAGAAGGTGTACATGTTGGTGTACCTTTATTGTGTTGGCCATTTTCAGTTGATCAGTTTCTCAATAAATCGTATATTTGTGATGTGTGGAAGACTGGACTTGAATTAGAGAAAGATGATAATGGTTTTATATCAAGGCAAGAGATAAAGAAGAAGGTGGATCAACTAGTTGGTGATGATGATATAAAGGCAATGTGTTTGAAAATGAAGAAAATGATCATTAGTAATATAGAAGAAGGTGGTCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGTGTTAAAGCCTAA
Protein sequence

>Msa1142310

MGVLPHFLVIPYPVQGHVNPLMQFSQVLAKHGCKVTFLHTEFNHKRSKTGVSEQDKIQVVTLPDGLEPEDDRSDIKKVLFSIKSTMPPRLPKLIEDVNALNVDNNIKWIVATFNMGWALEVGHNLGIKGALLFPASATTLACAVCIPKLILRMGLLILQNVVTSMLFVPVTLAQLVRTMHNICKVRGNPTKKQEIQISPDIPMIDTTNFPWRGVDKMLFDHFVQEIQTIKFGERWLCNTAYDLEPGVFSISPKFLPIGPLMASNNNKSSFWQEDTTCLDWLNNQAPQSVIYVSFGSMVVMDQNQFNELALGLELLDKPFLWVVRPSNDNKVNYAYPNDFHGSKGKIVGWAPQSKILNHPAIACFISHCGWNSTIEGVHVGVPLLCWPFSVDQFLNKSYICDVWKTGLELEKDDNGFISRQEIKKKVDQLVGDDDIKAMCLKMKKMIISNIEEGGQSSHNLQKFISCVKA*