AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100460 MtrunA17_Chr7g0217141 98.925 93 1 0 1 93 1 93 7.14e-60 177
Msa1100460 MtrunA17_Chr6g0453041 84.615 78 12 0 16 93 15 92 3.81e-40 127
Msa1100460 MtrunA17_Chr8g0362131 73.494 83 21 1 9 91 10 91 9.25e-34 111
Msa1100460 MtrunA17_Chr3g0093001 74.359 78 18 1 16 93 17 92 1.16e-32 108
Msa1100460 MtrunA17_Chr5g0416431 69.737 76 23 0 16 91 17 92 1.09e-31 106
Msa1100460 MtrunA17_Chr7g0237771 45.205 73 40 0 6 78 2 74 1.40e-11 55.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100460 AT3G28857.1 72.826 92 23 2 1 91 1 91 2.42e-37 121
Msa1100460 AT1G26945.1 77.333 75 17 0 18 92 19 93 3.63e-34 113
Msa1100460 AT5G39860.1 71.250 80 22 1 13 91 12 91 2.57e-32 108
Msa1100460 AT3G47710.1 62.766 94 32 2 1 93 1 92 3.37e-31 105
Msa1100460 AT5G15160.1 69.737 76 22 1 18 92 18 93 4.58e-30 102
Msa1100460 AT1G74500.1 68.354 79 22 2 16 93 17 93 7.27e-29 99.8

Find 53 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTAATTTAGCTTAATTA+AGG 0.234688 7_3:-30221567 Msa1100460:five_prime_UTR
TGCAAACAAGGTCGATGATT+TGG 0.301526 7_3:+30221486 None:intergenic
ATTCAATTGATTTGAGAGTT+TGG 0.303158 7_3:-30221924 Msa1100460:five_prime_UTR
TAAGTTTCTGATATAGTTGC+AGG 0.316132 7_3:+30219925 None:intergenic
AACATTTGGCCAATTAGCTT+TGG 0.337798 7_3:+30221844 None:intergenic
CATGCAGGTACCAGCTTCTA+AGG 0.347667 7_3:-30219960 Msa1100460:intron
TATAGTTGCAGGTTTCTTGT+AGG 0.377852 7_3:+30219936 None:intergenic
AGAAACTATTAATTCATCAT+TGG 0.386959 7_3:+30219804 None:intergenic
TCTGAGATTGTCTCAGTTGT+TGG 0.390220 7_3:-30219879 Msa1100460:CDS
TAATTCATCATTGGTTAAGT+AGG 0.403741 7_3:+30219813 None:intergenic
TTAAGCTAAATTAGTGCAAT+GGG 0.405387 7_3:+30221573 None:intergenic
AAAATGGAGAAAGAGGTATA+AGG 0.410804 7_3:+30221755 None:intergenic
GTGCTGAAGCTTCAATCATT+AGG 0.419766 7_3:-30219838 Msa1100460:CDS
TTGGAAGGGAAGAAAACATT+TGG 0.426921 7_3:+30221830 None:intergenic
TATGACTTACAAATCTAATC+TGG 0.430631 7_3:+30219599 None:intergenic
CTTTGGAAAAGGAGTGGACT+AGG 0.431847 7_3:+30221861 None:intergenic
TTGTTCCTGAGATTCGTAAC+AGG 0.433720 7_3:-30221451 Msa1100460:CDS
GAGGTGTAAGATATGATATA+TGG 0.450697 7_3:+30221726 None:intergenic
TAATGACTTCAGTTGGATAG+AGG 0.463225 7_3:-30219629 Msa1100460:three_prime_UTR
AAGAGGTATAAGGAAGGAAA+AGG 0.463993 7_3:+30221765 None:intergenic
ATTAAGCTAAATTAGTGCAA+TGG 0.469279 7_3:+30221572 None:intergenic
TGGCCAATTAGCTTTGGAAA+AGG 0.486700 7_3:+30221850 None:intergenic
GACACAAGCTATATATATAG+TGG 0.488522 7_3:+30221678 None:intergenic
CGAAGGTCAAGGCAACAATC+AGG 0.491771 7_3:-30221533 Msa1100460:CDS
TATATATAGTGGAAGGGGAA+TGG 0.503862 7_3:+30221689 None:intergenic
GAGCGCCTGTTACGAATCTC+AGG 0.511807 7_3:+30221446 None:intergenic
TCATTATATATGTTATAGCT+AGG 0.523956 7_3:-30221628 Msa1100460:five_prime_UTR
TCTTGTAGGACCTTAGAAGC+TGG 0.539736 7_3:+30219950 None:intergenic
TTACTGTACTCTCTCTATTG+TGG 0.542121 7_3:-30221793 Msa1100460:five_prime_UTR
AACAATCAGGAGGGTCTACT+CGG 0.547851 7_3:-30221520 Msa1100460:CDS
CTCCCTAAAATTCACACCTA+GGG 0.548766 7_3:-30221888 Msa1100460:five_prime_UTR
AGCTATATATATAGTGGAAG+GGG 0.549770 7_3:+30221684 None:intergenic
TATAGTGGAAGGGGAATGGA+AGG 0.551095 7_3:+30221693 None:intergenic
CAAGCTATATATATAGTGGA+AGG 0.558395 7_3:+30221682 None:intergenic
AGTAAAGTAGACAACAATGT+TGG 0.560866 7_3:+30221811 None:intergenic
CCTCCCTAAAATTCACACCT+AGG 0.566541 7_3:-30221889 Msa1100460:five_prime_UTR
AATGGAAGGAGTAGATAAAG+AGG 0.568296 7_3:+30221707 None:intergenic
AAGCTATATATATAGTGGAA+GGG 0.569743 7_3:+30221683 None:intergenic
TGGAGAAAGAGGTATAAGGA+AGG 0.571702 7_3:+30221759 None:intergenic
AAGTAGACAACAATGTTGGA+AGG 0.575963 7_3:+30221815 None:intergenic
GATAGTGTAATGACTTCAGT+TGG 0.579731 7_3:-30219636 Msa1100460:three_prime_UTR
GTTGACGCAATTTGCAAACA+AGG 0.588186 7_3:+30221474 None:intergenic
TCGTAACAGGCGCTCTGACA+AGG 0.592126 7_3:-30221438 Msa1100460:intron
GAGTGGACTAGGCTTTCCCT+AGG 0.592349 7_3:+30221872 None:intergenic
AATTAGCTTTGGAAAAGGAG+TGG 0.597808 7_3:+30221855 None:intergenic
AGTAGACAACAATGTTGGAA+GGG 0.605803 7_3:+30221816 None:intergenic
TATCAGAAACTTACAAAGTG+AGG 0.615011 7_3:-30219915 Msa1100460:CDS
GGTATAAGGAAGGAAAAGGA+TGG 0.615207 7_3:+30221769 None:intergenic
ATATGTCTAGTCGAAGGTCA+AGG 0.620989 7_3:-30221544 Msa1100460:CDS
AGGTCAAGGCAACAATCAGG+AGG 0.632611 7_3:-30221530 Msa1100460:CDS
TTAAGGATATGTCTAGTCGA+AGG 0.649414 7_3:-30221550 Msa1100460:exon
AGCACTATCAGAATCAATTG+TGG 0.660250 7_3:+30219856 None:intergenic
GGTCAAGGCAACAATCAGGA+GGG 0.687654 7_3:-30221529 Msa1100460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAGATCATTTAAAA+CGG + chr7_3:30220134-30220153 None:intergenic 10.0%
!!! TTAATAAGAAAATCTTTTAT+GGG + chr7_3:30220648-30220667 None:intergenic 10.0%
!!! TATTGGTTATTTATTTATTT+TGG + chr7_3:30220897-30220916 None:intergenic 10.0%
!!! TACTTCAAATATTTTGAATT+AGG + chr7_3:30220082-30220101 None:intergenic 15.0%
!!! AAAATTAGATCATTTAAAAC+GGG + chr7_3:30220133-30220152 None:intergenic 15.0%
!! TTATGTATTAATAGAAAATG+AGG + chr7_3:30220188-30220207 None:intergenic 15.0%
!!! TATCTTAACTATAATTTTCA+AGG - chr7_3:30220530-30220549 Msa1100460:intron 15.0%
!!! CTTAATAAGAAAATCTTTTA+TGG + chr7_3:30220649-30220668 None:intergenic 15.0%
!!! TTTTCTTATTAAGTTTTACT+TGG - chr7_3:30220656-30220675 Msa1100460:intron 15.0%
!! ATATATGTATGTATATGTAT+AGG - chr7_3:30221023-30221042 Msa1100460:intron 15.0%
!! AACATAAAATAACACTTATT+TGG - chr7_3:30221084-30221103 Msa1100460:intron 15.0%
!!! TTTGTTTTTGAGTTTAATTT+TGG - chr7_3:30221868-30221887 Msa1100460:five_prime_UTR 15.0%
!! TCATTATATATGTTATAGCT+AGG - chr7_3:30219796-30219815 Msa1100460:three_prime_UTR 20.0%
!! TTAAGTTAAAAATTGTGCAT+TGG - chr7_3:30220308-30220327 Msa1100460:intron 20.0%
!!! ATCAAGATAGTATCATTTTA+GGG + chr7_3:30220403-30220422 None:intergenic 20.0%
!! ATATGAAATCAATTAAAGTG+TGG + chr7_3:30221399-30221418 None:intergenic 20.0%
!! AGAAACTATTAATTCATCAT+TGG + chr7_3:30221623-30221642 None:intergenic 20.0%
!!! ATTCAATTGATTTGAGAGTT+TGG - chr7_3:30219500-30219519 Msa1100460:three_prime_UTR 25.0%
! TGATATATGGTATGCAAAAA+TGG + chr7_3:30219688-30219707 None:intergenic 25.0%
!! AAGCTATATATATAGTGGAA+GGG + chr7_3:30219744-30219763 None:intergenic 25.0%
! TTAAGCTAAATTAGTGCAAT+GGG + chr7_3:30219854-30219873 None:intergenic 25.0%
! ATTAAGCTAAATTAGTGCAA+TGG + chr7_3:30219855-30219874 None:intergenic 25.0%
!! GCACTAATTTAGCTTAATTA+AGG - chr7_3:30219857-30219876 Msa1100460:CDS 25.0%
! ATAGATACACACTATTCATA+AGG - chr7_3:30220033-30220052 Msa1100460:intron 25.0%
! TATAGCATATAAGATCTTGT+TGG - chr7_3:30220216-30220235 Msa1100460:intron 25.0%
!! CATCAAGATAGTATCATTTT+AGG + chr7_3:30220404-30220423 None:intergenic 25.0%
!!! CGTTTAGACTCTTTTTTTAA+AGG + chr7_3:30220442-30220461 None:intergenic 25.0%
! TTAAAAAAAGAGTCTAAACG+TGG - chr7_3:30220442-30220461 Msa1100460:intron 25.0%
! AGATATGACGTTATCTAATA+TGG + chr7_3:30220515-30220534 None:intergenic 25.0%
!! CTTATTAAGTTTTACTTGGA+TGG - chr7_3:30220660-30220679 Msa1100460:intron 25.0%
! TTTGCTAGTAAAATATGAGA+CGG - chr7_3:30221117-30221136 Msa1100460:intron 25.0%
! ACAGAATTATAAATACCATC+AGG - chr7_3:30221203-30221222 Msa1100460:intron 25.0%
! CGTTAATAATAAGGATCAAA+TGG - chr7_3:30221280-30221299 Msa1100460:intron 25.0%
!! ATGCACTATGCATTTTTATT+TGG + chr7_3:30221330-30221349 None:intergenic 25.0%
! TTGATTTCATATGCAAAGTA+CGG - chr7_3:30221407-30221426 Msa1100460:intron 25.0%
!! TAATTCATCATTGGTTAAGT+AGG + chr7_3:30221614-30221633 None:intergenic 25.0%
! TATGACTTACAAATCTAATC+TGG + chr7_3:30221828-30221847 None:intergenic 25.0%
AGTAAAGTAGACAACAATGT+TGG + chr7_3:30219616-30219635 None:intergenic 30.0%
! AAAATGGAGAAAGAGGTATA+AGG + chr7_3:30219672-30219691 None:intergenic 30.0%
GAGGTGTAAGATATGATATA+TGG + chr7_3:30219701-30219720 None:intergenic 30.0%
! AGCTATATATATAGTGGAAG+GGG + chr7_3:30219743-30219762 None:intergenic 30.0%
! CAAGCTATATATATAGTGGA+AGG + chr7_3:30219745-30219764 None:intergenic 30.0%
GACACAAGCTATATATATAG+TGG + chr7_3:30219749-30219768 None:intergenic 30.0%
ACACACTATTCATAAGGATA+AGG - chr7_3:30220039-30220058 Msa1100460:intron 30.0%
! TTAGATCATTTAAAACGGGA+CGG + chr7_3:30220129-30220148 None:intergenic 30.0%
ATTTAGTGTATGCTTGCATA+TGG - chr7_3:30220586-30220605 Msa1100460:intron 30.0%
TAGTAACCAATGATAGTAAG+AGG - chr7_3:30220750-30220769 Msa1100460:intron 30.0%
AGATATCCTCTTACTATCAT+TGG + chr7_3:30220759-30220778 None:intergenic 30.0%
! ACATTGTTGACTACTCTTAT+TGG + chr7_3:30220914-30220933 None:intergenic 30.0%
GAGGTAGTACGTTAATAATA+AGG - chr7_3:30221271-30221290 Msa1100460:intron 30.0%
TAAGTTTCTGATATAGTTGC+AGG + chr7_3:30221502-30221521 None:intergenic 30.0%
TATCAGAAACTTACAAAGTG+AGG - chr7_3:30221509-30221528 Msa1100460:CDS 30.0%
! TAATATGTGCCTCTTTTTGA+AGG - chr7_3:30221719-30221738 Msa1100460:five_prime_UTR 30.0%
! TCAAACAAGTGCTACATTTT+TGG + chr7_3:30221745-30221764 None:intergenic 30.0%
! TTCCCTAGGTGTGAATTTTA+GGG + chr7_3:30219541-30219560 None:intergenic 35.0%
! TTTCCCTAGGTGTGAATTTT+AGG + chr7_3:30219542-30219561 None:intergenic 35.0%
!! AATTAGCTTTGGAAAAGGAG+TGG + chr7_3:30219572-30219591 None:intergenic 35.0%
! ACTCCTTTTCCAAAGCTAAT+TGG - chr7_3:30219571-30219590 Msa1100460:three_prime_UTR 35.0%
! AACATTTGGCCAATTAGCTT+TGG + chr7_3:30219583-30219602 None:intergenic 35.0%
TTGGAAGGGAAGAAAACATT+TGG + chr7_3:30219597-30219616 None:intergenic 35.0%
AGTAGACAACAATGTTGGAA+GGG + chr7_3:30219611-30219630 None:intergenic 35.0%
AAGTAGACAACAATGTTGGA+AGG + chr7_3:30219612-30219631 None:intergenic 35.0%
TTACTGTACTCTCTCTATTG+TGG - chr7_3:30219631-30219650 Msa1100460:three_prime_UTR 35.0%
! AAGAGGTATAAGGAAGGAAA+AGG + chr7_3:30219662-30219681 None:intergenic 35.0%
GTATGCAAAAATGGAGAAAG+AGG + chr7_3:30219679-30219698 None:intergenic 35.0%
AATGGAAGGAGTAGATAAAG+AGG + chr7_3:30219720-30219739 None:intergenic 35.0%
! TATATATAGTGGAAGGGGAA+TGG + chr7_3:30219738-30219757 None:intergenic 35.0%
TTAAGGATATGTCTAGTCGA+AGG - chr7_3:30219874-30219893 Msa1100460:CDS 35.0%
! GACGGAGTGAGTATTATTTT+AGG + chr7_3:30220111-30220130 None:intergenic 35.0%
CTAGGTCACTTAATATGAGA+CGG - chr7_3:30220349-30220368 Msa1100460:intron 35.0%
ACGTACTAAAAATATGACCG+TGG - chr7_3:30220483-30220502 Msa1100460:intron 35.0%
ATCTAATATGGATCTGACCA+CGG + chr7_3:30220503-30220522 None:intergenic 35.0%
TTTCATACATCTGCGACATT+TGG + chr7_3:30220616-30220635 None:intergenic 35.0%
AGGTAGGACATATCAAACTT+AGG - chr7_3:30221140-30221159 Msa1100460:intron 35.0%
TATCAAACTTAGGCTGAAGT+TGG - chr7_3:30221150-30221169 Msa1100460:intron 35.0%
!! GGTTAATTTTGACCAACTCA+TGG - chr7_3:30221301-30221320 Msa1100460:intron 35.0%
! TTTATTTGGAGTCCATGAGT+TGG + chr7_3:30221316-30221335 None:intergenic 35.0%
GCAAGAGTTTGAAAATGTGA+GGG + chr7_3:30221374-30221393 None:intergenic 35.0%
AGCAAGAGTTTGAAAATGTG+AGG + chr7_3:30221375-30221394 None:intergenic 35.0%
TATAGTTGCAGGTTTCTTGT+AGG + chr7_3:30221491-30221510 None:intergenic 35.0%
AGCACTATCAGAATCAATTG+TGG + chr7_3:30221571-30221590 None:intergenic 35.0%
!!! CATTTTTGGCCTTCAAAAAG+AGG + chr7_3:30221731-30221750 None:intergenic 35.0%
GATAGTGTAATGACTTCAGT+TGG - chr7_3:30221788-30221807 Msa1100460:five_prime_UTR 35.0%
TAATGACTTCAGTTGGATAG+AGG - chr7_3:30221795-30221814 Msa1100460:five_prime_UTR 35.0%
CTCCCTAAAATTCACACCTA+GGG - chr7_3:30219536-30219555 Msa1100460:three_prime_UTR 40.0%
!! TGGCCAATTAGCTTTGGAAA+AGG + chr7_3:30219577-30219596 None:intergenic 40.0%
GGTATAAGGAAGGAAAAGGA+TGG + chr7_3:30219658-30219677 None:intergenic 40.0%
! TGGAGAAAGAGGTATAAGGA+AGG + chr7_3:30219668-30219687 None:intergenic 40.0%
ATATGTCTAGTCGAAGGTCA+AGG - chr7_3:30219880-30219899 Msa1100460:CDS 40.0%
TGCAAACAAGGTCGATGATT+TGG + chr7_3:30219941-30219960 None:intergenic 40.0%
GTTGACGCAATTTGCAAACA+AGG + chr7_3:30219953-30219972 None:intergenic 40.0%
TTGTTCCTGAGATTCGTAAC+AGG - chr7_3:30219973-30219992 Msa1100460:intron 40.0%
CATACGTGACATAGTCAACT+AGG - chr7_3:30220331-30220350 Msa1100460:intron 40.0%
GTCACTTAATATGAGACGGA+GGG - chr7_3:30220353-30220372 Msa1100460:intron 40.0%
TTACTTGGATGGTTTCATGC+AGG - chr7_3:30220671-30220690 Msa1100460:intron 40.0%
AATTGTCCGAGTTCAAACAC+TGG - chr7_3:30220822-30220841 Msa1100460:intron 40.0%
GCTAGTAAAATATGAGACGG+AGG - chr7_3:30221120-30221139 Msa1100460:intron 40.0%
GTAAAATATGAGACGGAGGT+AGG - chr7_3:30221124-30221143 Msa1100460:intron 40.0%
! AAACTTAGGCTGAAGTTGGT+TGG - chr7_3:30221154-30221173 Msa1100460:intron 40.0%
!! AAAGACTTGGATTAGCCTGA+TGG + chr7_3:30221221-30221240 None:intergenic 40.0%
CTCGACGGAAAAAAAAGACT+TGG + chr7_3:30221234-30221253 None:intergenic 40.0%
TCCGTCGAGATTCAATACAT+AGG - chr7_3:30221245-30221264 Msa1100460:intron 40.0%
CCCTATGTATTGAATCTCGA+CGG + chr7_3:30221249-30221268 None:intergenic 40.0%
CCGTCGAGATTCAATACATA+GGG - chr7_3:30221246-30221265 Msa1100460:intron 40.0%
TCGAGATTCAATACATAGGG+AGG - chr7_3:30221249-30221268 Msa1100460:intron 40.0%
AGATTCAATACATAGGGAGG+AGG - chr7_3:30221252-30221271 Msa1100460:intron 40.0%
GAAAATGTGAGGGAACATGT+TGG + chr7_3:30221364-30221383 None:intergenic 40.0%
TGCATCCACTATGTCAGTAT+CGG + chr7_3:30221446-30221465 None:intergenic 40.0%
! TCTGAGATTGTCTCAGTTGT+TGG - chr7_3:30221545-30221564 Msa1100460:CDS 40.0%
GTGCTGAAGCTTCAATCATT+AGG - chr7_3:30221586-30221605 Msa1100460:five_prime_UTR 40.0%
!! CCTAGGTGTGAATTTTAGGG+AGG + chr7_3:30219538-30219557 None:intergenic 45.0%
CCTCCCTAAAATTCACACCT+AGG - chr7_3:30219535-30219554 Msa1100460:three_prime_UTR 45.0%
! CTTTGGAAAAGGAGTGGACT+AGG + chr7_3:30219566-30219585 None:intergenic 45.0%
! TATAGTGGAAGGGGAATGGA+AGG + chr7_3:30219734-30219753 None:intergenic 45.0%
AACAATCAGGAGGGTCTACT+CGG - chr7_3:30219904-30219923 Msa1100460:CDS 45.0%
GGTCACTTAATATGAGACGG+AGG - chr7_3:30220352-30220371 Msa1100460:intron 45.0%
!! GGGAGTACTATCTTGATGTG+TGG - chr7_3:30220373-30220392 Msa1100460:intron 45.0%
CCTTCACCAGTGTTTGAACT+CGG + chr7_3:30220831-30220850 None:intergenic 45.0%
! CTGAAGTTGGTTGGATGACT+AGG - chr7_3:30221163-30221182 Msa1100460:intron 45.0%
TGGTTGGATGACTAGGTCAT+TGG - chr7_3:30221170-30221189 Msa1100460:intron 45.0%
ATGCAAAGTACGGCATGTGT+AGG - chr7_3:30221417-30221436 Msa1100460:intron 45.0%
GGTAACCGATACTGACATAG+TGG - chr7_3:30221438-30221457 Msa1100460:intron 45.0%
TCTTGTAGGACCTTAGAAGC+TGG + chr7_3:30221477-30221496 None:intergenic 45.0%
CGAAGGTCAAGGCAACAATC+AGG - chr7_3:30219891-30219910 Msa1100460:CDS 50.0%
AGGTCAAGGCAACAATCAGG+AGG - chr7_3:30219894-30219913 Msa1100460:CDS 50.0%
GGTCAAGGCAACAATCAGGA+GGG - chr7_3:30219895-30219914 Msa1100460:CDS 50.0%
CCGAGTTCAAACACTGGTGA+AGG - chr7_3:30220828-30220847 Msa1100460:intron 50.0%
!! CTGACATAGTGGATGCATGC+AGG - chr7_3:30221449-30221468 Msa1100460:CDS 50.0%
CATGCAGGTACCAGCTTCTA+AGG - chr7_3:30221464-30221483 Msa1100460:CDS 50.0%
!! GAGTGGACTAGGCTTTCCCT+AGG + chr7_3:30219555-30219574 None:intergenic 55.0%
GAGCGCCTGTTACGAATCTC+AGG + chr7_3:30219981-30220000 None:intergenic 55.0%
TCGTAACAGGCGCTCTGACA+AGG - chr7_3:30219986-30220005 Msa1100460:intron 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 30219490 30221956 30219490 ID=Msa1100460;Name=Msa1100460
chr7_3 mRNA 30219490 30221956 30219490 ID=Msa1100460-mRNA-1;Parent=Msa1100460;Name=Msa1100460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=392|1|1|1|1|1|2|330|93
chr7_3 exon 30219490 30219975 30219490 ID=Msa1100460-mRNA-1:exon:6448;Parent=Msa1100460-mRNA-1
chr7_3 exon 30221439 30221956 30221439 ID=Msa1100460-mRNA-1:exon:6447;Parent=Msa1100460-mRNA-1
chr7_3 five_prime_UTR 30221565 30221956 30221565 ID=Msa1100460-mRNA-1:five_prime_utr;Parent=Msa1100460-mRNA-1
chr7_3 CDS 30221439 30221564 30221439 ID=Msa1100460-mRNA-1:cds;Parent=Msa1100460-mRNA-1
chr7_3 CDS 30219820 30219975 30219820 ID=Msa1100460-mRNA-1:cds;Parent=Msa1100460-mRNA-1
chr7_3 three_prime_UTR 30219490 30219819 30219490 ID=Msa1100460-mRNA-1:three_prime_utr;Parent=Msa1100460-mRNA-1
Gene Sequence

>Msa1100460

ATGTCTAGTCGAAGGTCAAGGCAACAATCAGGAGGGTCTACTCGGATTTCTGATGACCAAATCATCGACCTTGTTTGCAAATTGCGTCAACTTGTTCCTGAGATTCGTAACAGGCGCTCTGACAAGGTACCAGCTTCTAAGGTCCTACAAGAAACCTGCAACTATATCAGAAACTTACAAAGTGAGGTTGATGATTTAAGTCTGAGATTGTCTCAGTTGTTGGCCACAATTGATTCTGATAGTGCTGAAGCTTCAATCATTAGGAGCCTACTTAACCAATGA
Protein sequence

>Msa1100460

MSSRRSRQQSGGSTRISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLQSEVDDLSLRLSQLLATIDSDSAEASIIRSLLNQ*