Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100680 | XP_003621272.1 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100680 | sp|P55217|CGS1_ARATH | 80.000 | 405 | 80 | 1 | 133 | 537 | 160 | 563 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100680 | G7L227 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1095 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1007370 | Msa1100680 | 0.832394 | 9.693226e-56 | -8.615850e-47 |
| Msa1087400 | Msa1100680 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100680 | MtrunA17_Chr7g0217761 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1095 |
| Msa1100680 | MtrunA17_Chr6g0453481 | 74.178 | 426 | 107 | 3 | 113 | 537 | 54 | 477 | 0.0 | 662 |
| Msa1100680 | MtrunA17_Chr1g0181151 | 36.391 | 338 | 211 | 4 | 198 | 534 | 129 | 463 | 6.76e-70 | 231 |
| Msa1100680 | MtrunA17_Chr3g0119851 | 30.030 | 333 | 218 | 7 | 198 | 519 | 92 | 420 | 4.72e-40 | 150 |
| Msa1100680 | MtrunA17_Chr1g0189071 | 29.042 | 334 | 221 | 8 | 198 | 519 | 93 | 422 | 2.07e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100680 | AT3G01120.1 | 80.000 | 405 | 80 | 1 | 133 | 537 | 160 | 563 | 0.0 | 689 |
| Msa1100680 | AT1G33320.1 | 70.079 | 381 | 113 | 1 | 157 | 537 | 33 | 412 | 0.0 | 564 |
| Msa1100680 | AT1G33320.2 | 70.699 | 372 | 108 | 1 | 166 | 537 | 3 | 373 | 0.0 | 558 |
| Msa1100680 | AT1G33320.3 | 71.254 | 327 | 93 | 1 | 211 | 537 | 3 | 328 | 3.66e-174 | 494 |
| Msa1100680 | AT3G57050.5 | 34.795 | 365 | 226 | 6 | 167 | 530 | 24 | 377 | 1.64e-70 | 231 |
| Msa1100680 | AT3G57050.4 | 34.795 | 365 | 226 | 6 | 167 | 530 | 46 | 399 | 2.31e-70 | 231 |
| Msa1100680 | AT3G57050.2 | 34.795 | 365 | 226 | 6 | 167 | 530 | 87 | 440 | 5.06e-70 | 231 |
| Msa1100680 | AT3G57050.1 | 34.795 | 365 | 226 | 6 | 167 | 530 | 102 | 455 | 6.02e-70 | 232 |
| Msa1100680 | AT3G57050.3 | 34.397 | 282 | 174 | 5 | 167 | 447 | 102 | 373 | 1.11e-51 | 181 |
| Msa1100680 | AT1G64660.1 | 29.730 | 333 | 220 | 7 | 198 | 519 | 93 | 422 | 1.78e-40 | 152 |
Find 183 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATATATTGCTGCCTCTTT+TGG | 0.179873 | 7_3:-30937546 | Msa1100680:CDS |
| GATGGCGATGTCGGCGAAAA+TGG | 0.188079 | 7_3:-30941260 | Msa1100680:CDS |
| ATGAGGCAGATGACTGGTTT+TGG | 0.206527 | 7_3:-30937736 | Msa1100680:CDS |
| ATTAATTCCTTGAACTGATT+TGG | 0.218651 | 7_3:-30936457 | Msa1100680:three_prime_UTR |
| TTTGATTATGGCTTATTTCT+TGG | 0.223514 | 7_3:+30936238 | None:intergenic |
| CCAAAAGAGGCAGCAATATA+TGG | 0.229851 | 7_3:+30937546 | None:intergenic |
| GTGGAAGATTTATGACAATT+TGG | 0.239016 | 7_3:-30936647 | Msa1100680:CDS |
| TAGCCTTAGATCTTTGATTA+TGG | 0.262096 | 7_3:+30936226 | None:intergenic |
| CGTCAAACTAGTTATGAATA+TGG | 0.263385 | 7_3:-30939949 | Msa1100680:CDS |
| AGCGATTCCGCTGGGGTTCC+CGG | 0.268122 | 7_3:+30941370 | None:intergenic |
| TTCACATTCATTTCATCATT+TGG | 0.278874 | 7_3:-30941733 | None:intergenic |
| GCTGAGTTGACGCTGGAAAT+TGG | 0.280438 | 7_3:+30941466 | None:intergenic |
| CACCAAGGGCAAGGGCCTTC+TGG | 0.291162 | 7_3:+30938904 | None:intergenic |
| TTGATTATGGCTTATTTCTT+GGG | 0.296733 | 7_3:+30936239 | None:intergenic |
| CCTTGCCCTTGGTGCTGATT+TGG | 0.297489 | 7_3:-30938895 | Msa1100680:CDS |
| TTCTCTCTTGTTATCTTGTC+TGG | 0.298913 | 7_3:-30936424 | Msa1100680:three_prime_UTR |
| TTAATTCCTTGAACTGATTT+GGG | 0.303748 | 7_3:-30936456 | Msa1100680:three_prime_UTR |
| CAACCCAACCAGTACTGTTT+TGG | 0.308335 | 7_3:-30939917 | Msa1100680:CDS |
| GGGAGAGGAGATGGCGGCGG+CGG | 0.310850 | 7_3:+30941505 | None:intergenic |
| AATAATGAATAGTGCCTATA+TGG | 0.313919 | 7_3:+30936558 | None:intergenic |
| CATACCGTGATCCCCATCTT+TGG | 0.314950 | 7_3:+30939628 | None:intergenic |
| TGGAGCCTTGCAATCTGCTT+TGG | 0.315672 | 7_3:-30939155 | Msa1100680:CDS |
| TGACTACTACTGATTGTTAC+AGG | 0.328186 | 7_3:-30939681 | Msa1100680:CDS |
| CAGAACTTTGCCACAAGAAT+GGG | 0.332287 | 7_3:-30938968 | Msa1100680:CDS |
| CACTTGGCCCTTTCTGATGC+AGG | 0.349298 | 7_3:+30936667 | None:intergenic |
| TTTGAAGGCTGATGTCTTGC+AGG | 0.352504 | 7_3:-30936590 | Msa1100680:CDS |
| TCAACTATCTTGATGGCATC+TGG | 0.354904 | 7_3:-30939760 | Msa1100680:CDS |
| AGAGGAGATGGCGGCGGCGG+AGG | 0.364366 | 7_3:+30941508 | None:intergenic |
| GGATGGAAGGGAGGTGAAAT+CGG | 0.370397 | 7_3:+30941583 | None:intergenic |
| ATGGCGATGTCGGCGAAAAT+GGG | 0.372646 | 7_3:-30941259 | Msa1100680:CDS |
| AAGTTTGGCCATCCTCATTC+CGG | 0.375018 | 7_3:+30938479 | None:intergenic |
| AAGCCATAATCAAAGATCTA+AGG | 0.379390 | 7_3:-30936229 | Msa1100680:three_prime_UTR |
| AATATCCGCGCAGCAAATAC+TGG | 0.380322 | 7_3:+30936477 | None:intergenic |
| TTATTTCTGGTTCAGGTACT+TGG | 0.384260 | 7_3:-30938755 | Msa1100680:intron |
| AACCAGAAGGCCCTTGCCCT+TGG | 0.386207 | 7_3:-30938906 | Msa1100680:CDS |
| GGGATGTGCCTCTAAAAGTT+TGG | 0.394303 | 7_3:+30938464 | None:intergenic |
| TTGCCAATAATGCAGATTGA+TGG | 0.397473 | 7_3:-30937612 | Msa1100680:intron |
| CATTCATTTCATCATTTGGT+TGG | 0.399205 | 7_3:-30941729 | Msa1100680:five_prime_UTR |
| GATGGCGGCGGCGGAGGAAA+GGG | 0.406739 | 7_3:+30941514 | None:intergenic |
| TGAGTACCAGTAAGACAAAA+TGG | 0.407885 | 7_3:+30937494 | None:intergenic |
| GGAAATGACGACGGCGGTTG+TGG | 0.411184 | 7_3:+30941546 | None:intergenic |
| TCGTGGTCTAATGAAGGAAC+CGG | 0.414153 | 7_3:-30941389 | Msa1100680:CDS |
| GGCTGATGTCTTGCAGGCAC+TGG | 0.415737 | 7_3:-30936584 | Msa1100680:CDS |
| GGGGCTTTGCTCGTCATTGA+TGG | 0.416380 | 7_3:-30938948 | Msa1100680:CDS |
| CTCATGGCAAGCTCATGTTC+AGG | 0.417754 | 7_3:+30937754 | None:intergenic |
| ATTGGGAGGAAAACGGAGGA+TGG | 0.418180 | 7_3:+30941484 | None:intergenic |
| CGGAGGAAAGGGAGGTTGTT+GGG | 0.419778 | 7_3:+30941525 | None:intergenic |
| CTGAGTTGACGCTGGAAATT+GGG | 0.421197 | 7_3:+30941467 | None:intergenic |
| AATTTGGTTCGATTCAGCTT+TGG | 0.422581 | 7_3:-30936631 | Msa1100680:CDS |
| CACAAATCGTCGCTGCTTCG+TGG | 0.427715 | 7_3:-30941406 | Msa1100680:CDS |
| GCGGAGGAAAGGGAGGTTGT+TGG | 0.434286 | 7_3:+30941524 | None:intergenic |
| GCAGGCACTGGAAGCCATAT+AGG | 0.435135 | 7_3:-30936572 | Msa1100680:exon |
| CGAGAGCATTGTGGATCAAC+CGG | 0.437391 | 7_3:-30937517 | Msa1100680:CDS |
| CGGAACCCCAGCGATTCCGC+TGG | 0.437478 | 7_3:+30941361 | None:intergenic |
| TCAGAACTTTGCCACAAGAA+TGG | 0.438377 | 7_3:-30938969 | Msa1100680:CDS |
| GGCTGAGTCAACTATCTTGA+TGG | 0.438443 | 7_3:-30939767 | Msa1100680:CDS |
| GCTGCAGTTACGACGCGCTT+TGG | 0.438927 | 7_3:+30941442 | None:intergenic |
| TCATTATTGAATCAGTGAAC+TGG | 0.440444 | 7_3:-30939794 | Msa1100680:intron |
| GAATTATGATTGCATGTGTT+GGG | 0.441020 | 7_3:-30936391 | Msa1100680:three_prime_UTR |
| AGATGGCGGCGGCGGAGGAA+AGG | 0.442378 | 7_3:+30941513 | None:intergenic |
| AGAGACTGTTCTTCCAAAGA+TGG | 0.448366 | 7_3:-30939641 | Msa1100680:CDS |
| TCAGGATGACTTGGCAAGCC+TGG | 0.449767 | 7_3:+30937772 | None:intergenic |
| CATAGTCTTGCTGATGGCGC+TGG | 0.451246 | 7_3:-30939725 | Msa1100680:CDS |
| AGGAAAACGGAGGATGGGAG+AGG | 0.452254 | 7_3:+30941490 | None:intergenic |
| GATGGAAGGGAGGTGAAATC+GGG | 0.452446 | 7_3:+30941584 | None:intergenic |
| CCTCCAAAACAGTACTGGTT+GGG | 0.455886 | 7_3:+30939914 | None:intergenic |
| ACGGAGGATGGGAGAGGAGA+TGG | 0.462549 | 7_3:+30941496 | None:intergenic |
| ATCAAAGATCTAAGGCTAGC+TGG | 0.463182 | 7_3:-30936221 | Msa1100680:three_prime_UTR |
| GGGAACCCCAGCGGAATCGC+TGG | 0.468113 | 7_3:-30941368 | Msa1100680:CDS |
| TGGGGTTCCGACACCGGTGC+CGG | 0.468569 | 7_3:-30941348 | Msa1100680:CDS |
| GTCAAACTAGTTATGAATAT+GGG | 0.469406 | 7_3:-30939948 | Msa1100680:CDS |
| CAAAAGAGGCAGCAATATAT+GGG | 0.473709 | 7_3:+30937547 | None:intergenic |
| CTTCTCCTCCAAAACAGTAC+TGG | 0.475513 | 7_3:+30939909 | None:intergenic |
| TTGGTTGGTGTAGAGGAAGT+AGG | 0.476270 | 7_3:-30941714 | Msa1100680:five_prime_UTR |
| TTTCTGGTTCAGGTACTTGG+TGG | 0.478517 | 7_3:-30938752 | Msa1100680:intron |
| GACGACGGCGGTTGTGGTGG+TGG | 0.479685 | 7_3:+30941552 | None:intergenic |
| GTGAAGCGTGTCTACTATCC+AGG | 0.482255 | 7_3:-30937790 | Msa1100680:CDS |
| AATCGCTGGGGTTCCGACAC+CGG | 0.484568 | 7_3:-30941354 | Msa1100680:CDS |
| CATCGGCGTCGAGGTCTAAC+GGG | 0.487697 | 7_3:+30941288 | None:intergenic |
| TGAATCAATAAATTTAATTG+TGG | 0.490973 | 7_3:+30937578 | None:intergenic |
| GAGACTGTTCTTCCAAAGAT+GGG | 0.491918 | 7_3:-30939640 | Msa1100680:CDS |
| GTACTTGGTGGTTGCATCAG+TGG | 0.493649 | 7_3:-30938740 | Msa1100680:CDS |
| GATGGGAGAGGAGATGGCGG+CGG | 0.494926 | 7_3:+30941502 | None:intergenic |
| TGCAAGGCTCCAACATCAGC+AGG | 0.497319 | 7_3:+30939166 | None:intergenic |
| GTGGTTGATCCTGCTGATGT+TGG | 0.498961 | 7_3:-30939175 | Msa1100680:CDS |
| AGAACACCCAAATCAGTTCA+AGG | 0.499699 | 7_3:+30936450 | None:intergenic |
| GGAACCCCAGCGATTCCGCT+GGG | 0.503718 | 7_3:+30941362 | None:intergenic |
| TGAATTATGATTGCATGTGT+TGG | 0.505745 | 7_3:-30936392 | Msa1100680:three_prime_UTR |
| AGCTCATGTTCAGGATGACT+TGG | 0.511225 | 7_3:+30937763 | None:intergenic |
| GGAACCCCAGCGGAATCGCT+GGG | 0.511727 | 7_3:-30941367 | Msa1100680:CDS |
| GTACAGCAACAGAATTCAAC+CGG | 0.512244 | 7_3:-30938498 | Msa1100680:CDS |
| GCTCTCGCAGCCACCAAAAG+AGG | 0.513969 | 7_3:+30937533 | None:intergenic |
| TTGGGAGGAAAACGGAGGAT+GGG | 0.514698 | 7_3:+30941485 | None:intergenic |
| AATGACGACGGCGGTTGTGG+TGG | 0.517746 | 7_3:+30941549 | None:intergenic |
| CAACTATCTTGATGGCATCT+GGG | 0.519100 | 7_3:-30939759 | Msa1100680:CDS |
| ATGGCGCTGGTTCCAGCCGG+TGG | 0.519978 | 7_3:-30939712 | Msa1100680:CDS |
| TCCTCCAAAACAGTACTGGT+TGG | 0.520178 | 7_3:+30939913 | None:intergenic |
| TCATCATTTGGTTGGTGTAG+AGG | 0.521132 | 7_3:-30941721 | Msa1100680:five_prime_UTR |
| CTGATGGCGCTGGTTCCAGC+CGG | 0.524673 | 7_3:-30939715 | Msa1100680:CDS |
| CTGATTGTTACAGGAAGACT+AGG | 0.526898 | 7_3:-30939672 | Msa1100680:CDS |
| GTCACAAGATGTCCACCGGC+TGG | 0.532380 | 7_3:+30939700 | None:intergenic |
| GCTTAATGTCAACACATCTC+AGG | 0.544187 | 7_3:+30938997 | None:intergenic |
| TTGAATCAGTGAACTGGAAG+GGG | 0.544987 | 7_3:-30939788 | Msa1100680:intron |
| GGACCTTCCTGCATCAGAAA+GGG | 0.545206 | 7_3:-30936674 | Msa1100680:CDS |
| GACATCGCCATCGGCGACAT+CGG | 0.546358 | 7_3:+30941271 | None:intergenic |
| ACATCGGCGTCGAGGTCTAA+CGG | 0.546534 | 7_3:+30941287 | None:intergenic |
| GGTGTAGAGGAAGTAGGTGT+AGG | 0.546764 | 7_3:-30941708 | Msa1100680:five_prime_UTR |
| GCGTCGAGGTCTAACGGGAC+CGG | 0.547330 | 7_3:+30941293 | None:intergenic |
| GGGACCTTCCTGCATCAGAA+AGG | 0.547983 | 7_3:-30936675 | Msa1100680:CDS |
| CCAAATCAGCACCAAGGGCA+AGG | 0.548480 | 7_3:+30938895 | None:intergenic |
| CATCTCAGGAATGGATTGGT+AGG | 0.550373 | 7_3:+30939011 | None:intergenic |
| CTTGCCATGAGGCAGATGAC+TGG | 0.550800 | 7_3:-30937742 | Msa1100680:CDS |
| GCAAGGGCCTTCTGGTTCAA+AGG | 0.551371 | 7_3:+30938912 | None:intergenic |
| TGGCCCTTTCTGATGCAGGA+AGG | 0.552383 | 7_3:+30936671 | None:intergenic |
| GCAACAGCCGGCACCGGTGT+CGG | 0.552476 | 7_3:+30941341 | None:intergenic |
| AGTTATGAATATGGGCGCTA+TGG | 0.552948 | 7_3:-30939940 | Msa1100680:CDS |
| CTTTGGTGCTGAGTTGACGC+TGG | 0.553207 | 7_3:+30941459 | None:intergenic |
| TATTATGCAGCTGAGAGACT+TGG | 0.553724 | 7_3:-30940547 | Msa1100680:intron |
| TTTGGGCGGTGCTCTTAACC+CGG | 0.553808 | 7_3:-30938675 | Msa1100680:intron |
| GAGATGTGTTGACATTAAGC+TGG | 0.555073 | 7_3:-30938994 | Msa1100680:CDS |
| ATGTCAACACATCTCAGGAA+TGG | 0.560252 | 7_3:+30939002 | None:intergenic |
| TCGACAGCAGATGCAACAGC+CGG | 0.560540 | 7_3:+30941329 | None:intergenic |
| GATGTCGCCGATGGCGATGT+CGG | 0.561711 | 7_3:-30941269 | Msa1100680:CDS |
| ATCTGCTTTGGAGCAGAACA+AGG | 0.562254 | 7_3:-30939143 | Msa1100680:intron |
| GCTGGAAATTGGGAGGAAAA+CGG | 0.563873 | 7_3:+30941477 | None:intergenic |
| GGCGGCGGCGGAGGAAAGGG+AGG | 0.564640 | 7_3:+30941517 | None:intergenic |
| AACGCGGTGGAAACTTGAAA+CGG | 0.568103 | 7_3:+30941631 | None:intergenic |
| AACACATCTCAGGAATGGAT+TGG | 0.568381 | 7_3:+30939007 | None:intergenic |
| CTGCTCCAAAGCAGATTGCA+AGG | 0.570077 | 7_3:+30939150 | None:intergenic |
| AACAGAATTCAACCGGAATG+AGG | 0.571836 | 7_3:-30938491 | Msa1100680:CDS |
| CGTCGTAACTGCAGCAACAT+CGG | 0.574560 | 7_3:-30941434 | Msa1100680:CDS |
| CAAATCAGCACCAAGGGCAA+GGG | 0.575071 | 7_3:+30938896 | None:intergenic |
| TAGGCAGAAGTGTTCACCAC+AGG | 0.578051 | 7_3:+30940493 | None:intergenic |
| GCTGCTTCGTGGTCTAATGA+AGG | 0.578161 | 7_3:-30941395 | Msa1100680:CDS |
| GCAGATGCAACAGCCGGCAC+CGG | 0.578591 | 7_3:+30941335 | None:intergenic |
| CCTTGTTGAGCAGACATCTG+TGG | 0.582724 | 7_3:-30939194 | Msa1100680:intron |
| AAGGGAGGTGAAATCGGGAT+CGG | 0.583036 | 7_3:+30941589 | None:intergenic |
| TGGCGATGTCGGCGAAAATG+GGG | 0.587885 | 7_3:-30941258 | Msa1100680:CDS |
| ATTGAATCAGTGAACTGGAA+GGG | 0.588819 | 7_3:-30939789 | Msa1100680:intron |
| GAGGATGGGAGAGGAGATGG+CGG | 0.589754 | 7_3:+30941499 | None:intergenic |
| TGCAGCTGAGAGACTTGGTA+GGG | 0.591730 | 7_3:-30940542 | Msa1100680:intron |
| TGCTACGCCTTTGAACCAGA+AGG | 0.592523 | 7_3:-30938919 | Msa1100680:CDS |
| GAATGGATTGGTAGGAGACT+CGG | 0.593229 | 7_3:+30939019 | None:intergenic |
| GAATTCAACCGGAATGAGGA+TGG | 0.593368 | 7_3:-30938487 | Msa1100680:CDS |
| CGAGCAAAGCCCCATTCTTG+TGG | 0.593385 | 7_3:+30938958 | None:intergenic |
| TACCAGTAAGACAAAATGGC+CGG | 0.596895 | 7_3:+30937498 | None:intergenic |
| TGTCGATGCAACAACTGCGC+CGG | 0.598658 | 7_3:-30941312 | Msa1100680:CDS |
| CATAACCAAATCAGCACCAA+GGG | 0.599807 | 7_3:+30938890 | None:intergenic |
| AGGTGAAATCGGGATCGGAA+CGG | 0.600745 | 7_3:+30941594 | None:intergenic |
| ATGCAGCTGAGAGACTTGGT+AGG | 0.605179 | 7_3:-30940543 | Msa1100680:intron |
| CGTGGTCTAATGAAGGAACC+GGG | 0.605736 | 7_3:-30941388 | Msa1100680:CDS |
| TCTTCCAAAGATGGGGATCA+CGG | 0.608418 | 7_3:-30939632 | Msa1100680:intron |
| TATTGAATCAGTGAACTGGA+AGG | 0.608896 | 7_3:-30939790 | Msa1100680:intron |
| GGTAGGGCTATTGTGACTGA+TGG | 0.611008 | 7_3:-30940526 | Msa1100680:CDS |
| AGTAGTCACAAGATGTCCAC+CGG | 0.611288 | 7_3:+30939696 | None:intergenic |
| CTCGACGCCGATGTCGCCGA+TGG | 0.612253 | 7_3:-30941278 | Msa1100680:CDS |
| TGCTAGCATAGTCTTGCTGA+TGG | 0.614200 | 7_3:-30939731 | Msa1100680:CDS |
| AAAACCAGTCATCTGCCTCA+TGG | 0.617037 | 7_3:+30937738 | None:intergenic |
| AAAACGAAGAATAAGAACTA+CGG | 0.621949 | 7_3:+30941222 | None:intergenic |
| AGAACTTTGCCACAAGAATG+GGG | 0.622700 | 7_3:-30938967 | Msa1100680:CDS |
| TGGTGGCTGCGAGAGCATTG+TGG | 0.623130 | 7_3:-30937526 | Msa1100680:CDS |
| GGGATCGGAACGGCATTCGA+AGG | 0.627492 | 7_3:+30941604 | None:intergenic |
| GCAAGCAAAACGATTCATGC+CGG | 0.638119 | 7_3:-30941188 | Msa1100680:intron |
| CACTCTTGTACGAAGTACAT+CGG | 0.640138 | 7_3:-30938867 | Msa1100680:CDS |
| ATTGTCATAAATCTTCCACT+TGG | 0.643061 | 7_3:+30936651 | None:intergenic |
| AGAAGTGTTCACCACAGGAG+TGG | 0.645583 | 7_3:+30940498 | None:intergenic |
| CTGCATCAGAAAGGGCCAAG+TGG | 0.649606 | 7_3:-30936666 | Msa1100680:CDS |
| AGACTGTTCTTCCAAAGATG+GGG | 0.658293 | 7_3:-30939639 | Msa1100680:CDS |
| CATCGGCGACATCGGCGTCG+AGG | 0.660124 | 7_3:+30941279 | None:intergenic |
| AGTTGACGCTGGAAATTGGG+AGG | 0.667203 | 7_3:+30941470 | None:intergenic |
| GCTGCATACCTATTCATCAG+AGG | 0.677803 | 7_3:-30938543 | Msa1100680:CDS |
| GAACCCCAGCGGAATCGCTG+GGG | 0.677985 | 7_3:-30941366 | Msa1100680:CDS |
| AGGTTGTTGGGAAATGACGA+CGG | 0.687100 | 7_3:+30941537 | None:intergenic |
| GCATAACCAAATCAGCACCA+AGG | 0.689976 | 7_3:+30938889 | None:intergenic |
| TGATGGAATTACCACTCCTG+TGG | 0.690564 | 7_3:-30940509 | Msa1100680:CDS |
| TCTTGTACGAAGTACATCGG+TGG | 0.698870 | 7_3:-30938864 | Msa1100680:CDS |
| GAAGGAACCGGGAACCCCAG+CGG | 0.706836 | 7_3:-30941377 | Msa1100680:CDS |
| CTGAACATGAGCTTGCCATG+AGG | 0.711855 | 7_3:-30937753 | Msa1100680:CDS |
| GGCATTCGAAGGTGAAAACG+CGG | 0.732442 | 7_3:+30941615 | None:intergenic |
| GGAAATTGGGAGGAAAACGG+AGG | 0.733933 | 7_3:+30941480 | None:intergenic |
| ATTCGAAGGTGAAAACGCGG+TGG | 0.746724 | 7_3:+30941618 | None:intergenic |
| TGAAACCAGTATTTGCTGCG+CGG | 0.749477 | 7_3:-30936482 | Msa1100680:three_prime_UTR |
| TTGTTGGGAAATGACGACGG+CGG | 0.814028 | 7_3:+30941540 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTATTTTTTAATTT+TGG | - | chr7_3:30937486-30937505 | Msa1100680:intron | 0.0% |
| !!! | TAGTTTTAATTTCAAAAATT+AGG | - | chr7_3:30936877-30936896 | Msa1100680:intron | 10.0% |
| !!! | AAAAATTAGGTTAATTTTAT+TGG | - | chr7_3:30936890-30936909 | Msa1100680:intron | 10.0% |
| !! | ATTATTTACTTTATTCAATT+TGG | - | chr7_3:30940957-30940976 | Msa1100680:intron | 10.0% |
| !! | TTATTTACTTTATTCAATTT+GGG | - | chr7_3:30940958-30940977 | Msa1100680:intron | 10.0% |
| !! | ATAATTAAAAATTCACATAC+CGG | + | chr7_3:30936740-30936759 | None:intergenic | 15.0% |
| !!! | TAAATGAAGTTTTTGTTTTT+TGG | - | chr7_3:30936948-30936967 | Msa1100680:intron | 15.0% |
| !!! | TTTTTTGGTGAATTTTTTTT+TGG | - | chr7_3:30936963-30936982 | Msa1100680:intron | 15.0% |
| !!! | TAATTTTATATGCTAAAAAG+TGG | - | chr7_3:30937047-30937066 | Msa1100680:intron | 15.0% |
| !!! | AATTTTATATGCTAAAAAGT+GGG | - | chr7_3:30937048-30937067 | Msa1100680:intron | 15.0% |
| !! | ATATATCCATTTCAAATATT+GGG | + | chr7_3:30938585-30938604 | None:intergenic | 15.0% |
| !!! | TAAACTATATTTTAAAGAAC+AGG | + | chr7_3:30939095-30939114 | None:intergenic | 15.0% |
| !!! | TGATATTTTGTATTATTAAC+TGG | - | chr7_3:30939485-30939504 | Msa1100680:intron | 15.0% |
| !!! | GATATTTTGTATTATTAACT+GGG | - | chr7_3:30939486-30939505 | Msa1100680:intron | 15.0% |
| !!! | TATTTTAAAGACAAACAAAA+TGG | - | chr7_3:30939773-30939792 | Msa1100680:CDS | 15.0% |
| !! | ATATTAAAAATGGAAAATGT+TGG | + | chr7_3:30939898-30939917 | None:intergenic | 15.0% |
| !!! | CATTTTTAATATTAACCTTT+GGG | - | chr7_3:30939906-30939925 | Msa1100680:CDS | 15.0% |
| !! | CGATAATTCAAATAAAAAAA+AGG | + | chr7_3:30939987-30940006 | None:intergenic | 15.0% |
| !! | TGAATCAATAAATTTAATTG+TGG | + | chr7_3:30940331-30940350 | None:intergenic | 15.0% |
| !!! | TTTTAAACAAAAATCAATCT+AGG | - | chr7_3:30941635-30941654 | Msa1100680:CDS | 15.0% |
| !! | TTTAAACAAAAATCAATCTA+GGG | - | chr7_3:30941636-30941655 | Msa1100680:CDS | 15.0% |
| !! | ATTTATATACTTTCAGTCAA+AGG | - | chr7_3:30937092-30937111 | Msa1100680:intron | 20.0% |
| !!! | AGGAATATAATTTTAGAAAG+TGG | - | chr7_3:30937112-30937131 | Msa1100680:intron | 20.0% |
| !!! | GGAATATAATTTTAGAAAGT+GGG | - | chr7_3:30937113-30937132 | Msa1100680:intron | 20.0% |
| !! | TGGGTATCTAATAAAAAAAT+TGG | - | chr7_3:30937132-30937151 | Msa1100680:intron | 20.0% |
| !!! | TGAATGAATTTGTTATGTAA+GGG | - | chr7_3:30937701-30937720 | Msa1100680:intron | 20.0% |
| !!! | AATTGTTTTAATTGAAAGTG+TGG | - | chr7_3:30938403-30938422 | Msa1100680:intron | 20.0% |
| !!! | ATCATACTTTGTAATTTTGT+CGG | - | chr7_3:30938551-30938570 | Msa1100680:intron | 20.0% |
| !!! | TTTTAACCCAATATTTGAAA+TGG | - | chr7_3:30938576-30938595 | Msa1100680:intron | 20.0% |
| !! | GATATATCCATTTCAAATAT+TGG | + | chr7_3:30938586-30938605 | None:intergenic | 20.0% |
| !! | TTGAAATGGATATATCTTAT+TGG | - | chr7_3:30938590-30938609 | Msa1100680:intron | 20.0% |
| !! | ACAATAATAGTATTGTTCTA+TGG | + | chr7_3:30939312-30939331 | None:intergenic | 20.0% |
| !! | CCAAAGGTTAATATTAAAAA+TGG | + | chr7_3:30939908-30939927 | None:intergenic | 20.0% |
| !!! | CCATTTTTAATATTAACCTT+TGG | - | chr7_3:30939905-30939924 | Msa1100680:CDS | 20.0% |
| !! | AACAACATACTATTATTTGT+AGG | - | chr7_3:30940094-30940113 | Msa1100680:intron | 20.0% |
| !!! | TGTTATAACAAAAAGCATTA+TGG | + | chr7_3:30940248-30940267 | None:intergenic | 20.0% |
| !!! | AACTTTCAATTCTATTTCTT+AGG | + | chr7_3:30940811-30940830 | None:intergenic | 20.0% |
| !! | AAGAAATAGAATTGAAAGTT+TGG | - | chr7_3:30940811-30940830 | Msa1100680:intron | 20.0% |
| !! | AAAGAGATATATTAAGTACA+TGG | + | chr7_3:30940992-30941011 | None:intergenic | 20.0% |
| ! | AAAACGAAGAATAAGAACTA+CGG | + | chr7_3:30936687-30936706 | None:intergenic | 25.0% |
| !! | AAATCTGAATCTTTCTCTTT+TGG | + | chr7_3:30937215-30937234 | None:intergenic | 25.0% |
| !! | AGCAGTTTTCTTAAAAAAGT+AGG | + | chr7_3:30937435-30937454 | None:intergenic | 25.0% |
| !!! | TGCTGATCTTATTGATTTTA+AGG | - | chr7_3:30937451-30937470 | Msa1100680:intron | 25.0% |
| !!! | GTGAATGAATTTGTTATGTA+AGG | - | chr7_3:30937700-30937719 | Msa1100680:intron | 25.0% |
| ! | TTTAGAAAAACATTCATAGC+TGG | + | chr7_3:30937915-30937934 | None:intergenic | 25.0% |
| !! | TCTAAATTTTATCACTTTGC+AGG | - | chr7_3:30937929-30937948 | Msa1100680:intron | 25.0% |
| ! | GTCAAACTAGTTATGAATAT+GGG | - | chr7_3:30937958-30937977 | Msa1100680:intron | 25.0% |
| !! | TTGTAATATTTGAAATGCTG+TGG | - | chr7_3:30938067-30938086 | Msa1100680:intron | 25.0% |
| !! | TCATACTTTGTAATTTTGTC+GGG | - | chr7_3:30938552-30938571 | Msa1100680:intron | 25.0% |
| ! | AATGGATATATCTTATTGGT+TGG | - | chr7_3:30938594-30938613 | Msa1100680:intron | 25.0% |
| !! | ATGGATATATCTTATTGGTT+GGG | - | chr7_3:30938595-30938614 | Msa1100680:intron | 25.0% |
| !! | AACCAGAAATAAGTGTTTTT+AGG | + | chr7_3:30939143-30939162 | None:intergenic | 25.0% |
| !! | TCGAATTTTGCATCATATTT+TGG | - | chr7_3:30939213-30939232 | Msa1100680:intron | 25.0% |
| !! | CGAATTTTGCATCATATTTT+GGG | - | chr7_3:30939214-30939233 | Msa1100680:intron | 25.0% |
| ! | ACATATATCAATCAAGGAAT+CGG | + | chr7_3:30939275-30939294 | None:intergenic | 25.0% |
| ! | TTTGCAACATATATCAATCA+AGG | + | chr7_3:30939281-30939300 | None:intergenic | 25.0% |
| ! | AAAATATCATAGTAATGCCA+TGG | + | chr7_3:30939474-30939493 | None:intergenic | 25.0% |
| !!! | CACAAAGAAACTTTTTGAAA+CGG | + | chr7_3:30939729-30939748 | None:intergenic | 25.0% |
| ! | CTATCATTACTGAAATATCA+GGG | + | chr7_3:30940047-30940066 | None:intergenic | 25.0% |
| !! | TAGTATGTTGTTGTTAATCA+TGG | + | chr7_3:30940086-30940105 | None:intergenic | 25.0% |
| !!! | GCTTTTTGTTATAACATAGT+TGG | - | chr7_3:30940252-30940271 | Msa1100680:intron | 25.0% |
| ! | CTAAGAAAGATTTCATTACA+GGG | + | chr7_3:30940517-30940536 | None:intergenic | 25.0% |
| ! | ACTAAGAAAGATTTCATTAC+AGG | + | chr7_3:30940518-30940537 | None:intergenic | 25.0% |
| ! | ATTTAATAGACACTTCCAAT+TGG | + | chr7_3:30940692-30940711 | None:intergenic | 25.0% |
| !!! | AATTGGAAGTGTCTATTAAA+TGG | - | chr7_3:30940691-30940710 | Msa1100680:intron | 25.0% |
| !!! | TAGAATGTTTTTTGGGAATT+GGG | - | chr7_3:30940768-30940787 | Msa1100680:intron | 25.0% |
| !!! | TAGAATTGAAAGTTTGGTTT+TGG | - | chr7_3:30940817-30940836 | Msa1100680:intron | 25.0% |
| ! | TTAATAGAAGTGAAAGTGAA+GGG | + | chr7_3:30941019-30941038 | None:intergenic | 25.0% |
| ! | TTTAATAGAAGTGAAAGTGA+AGG | + | chr7_3:30941020-30941039 | None:intergenic | 25.0% |
| ! | AAGAAACATGAGTCAAAAAT+AGG | + | chr7_3:30941110-30941129 | None:intergenic | 25.0% |
| ! | AAGATTAAATACAGCTACAA+AGG | + | chr7_3:30941193-30941212 | None:intergenic | 25.0% |
| ! | AATAATGAATAGTGCCTATA+TGG | + | chr7_3:30941351-30941370 | None:intergenic | 25.0% |
| ! | ATTAATTCCTTGAACTGATT+TGG | - | chr7_3:30941449-30941468 | Msa1100680:CDS | 25.0% |
| !! | TTAATTCCTTGAACTGATTT+GGG | - | chr7_3:30941450-30941469 | Msa1100680:CDS | 25.0% |
| !! | TTGATTATGGCTTATTTCTT+GGG | + | chr7_3:30941670-30941689 | None:intergenic | 25.0% |
| !! | TTTGATTATGGCTTATTTCT+TGG | + | chr7_3:30941671-30941690 | None:intergenic | 25.0% |
| ! | TGGTACAAAAAACTCAGTTT+TGG | + | chr7_3:30937195-30937214 | None:intergenic | 30.0% |
| !!! | TGTGTTGATTGATGAGTTTT+TGG | - | chr7_3:30937328-30937347 | Msa1100680:intron | 30.0% |
| TTCAATGTAATCACATCTGT+TGG | - | chr7_3:30937602-30937621 | Msa1100680:intron | 30.0% | |
| !! | ATTTGTTATGTAAGGGAATG+AGG | - | chr7_3:30937708-30937727 | Msa1100680:intron | 30.0% |
| ! | TTTGTTATGTAAGGGAATGA+GGG | - | chr7_3:30937709-30937728 | Msa1100680:intron | 30.0% |
| CAGATGATTTAAGAAATCTG+AGG | + | chr7_3:30937846-30937865 | None:intergenic | 30.0% | |
| CGTCAAACTAGTTATGAATA+TGG | - | chr7_3:30937957-30937976 | Msa1100680:intron | 30.0% | |
| TCATTATTGAATCAGTGAAC+TGG | - | chr7_3:30938112-30938131 | Msa1100680:intron | 30.0% | |
| !! | GTGAATTCATTGATTTGTGT+TGG | - | chr7_3:30938300-30938319 | Msa1100680:intron | 30.0% |
| ! | TTGCTTGAAACTGCATTTTA+TGG | - | chr7_3:30938346-30938365 | Msa1100680:intron | 30.0% |
| ! | TCTTCCTGGAAATTTTTATG+TGG | - | chr7_3:30938472-30938491 | Msa1100680:CDS | 30.0% |
| TGAAAGTGAATGATTGATAG+AGG | - | chr7_3:30938514-30938533 | Msa1100680:CDS | 30.0% | |
| ! | CATACTTTGTAATTTTGTCG+GGG | - | chr7_3:30938553-30938572 | Msa1100680:intron | 30.0% |
| ! | TTAGTGTTGGGAAGATTAAT+TGG | - | chr7_3:30938786-30938805 | Msa1100680:intron | 30.0% |
| TAGATACTGTAGAATTCTGA+TGG | - | chr7_3:30938830-30938849 | Msa1100680:intron | 30.0% | |
| GACCTAAAAACACTTATTTC+TGG | - | chr7_3:30939138-30939157 | Msa1100680:intron | 30.0% | |
| !! | AAAACACTTATTTCTGGTTC+AGG | - | chr7_3:30939144-30939163 | Msa1100680:CDS | 30.0% |
| !! | ATTTTGCATCATATTTTGGG+CGG | - | chr7_3:30939217-30939236 | Msa1100680:intron | 30.0% |
| CATATATCAATCAAGGAATC+GGG | + | chr7_3:30939274-30939293 | None:intergenic | 30.0% | |
| TAATGATAACAGTAATGCCA+TGG | - | chr7_3:30939523-30939542 | Msa1100680:intron | 30.0% | |
| ! | GTTCCATATCTTGATTTTAG+CGG | - | chr7_3:30939795-30939814 | Msa1100680:intron | 30.0% |
| !! | TTCCATATCTTGATTTTAGC+GGG | - | chr7_3:30939796-30939815 | Msa1100680:intron | 30.0% |
| GTAATAATGTGTTCTGCTAT+AGG | - | chr7_3:30939956-30939975 | Msa1100680:CDS | 30.0% | |
| ATCAGGGACATTATACAAAA+AGG | + | chr7_3:30940031-30940050 | None:intergenic | 30.0% | |
| GCTATCATTACTGAAATATC+AGG | + | chr7_3:30940048-30940067 | None:intergenic | 30.0% | |
| TTACAGGGTCACATTTAAAT+AGG | + | chr7_3:30940502-30940521 | None:intergenic | 30.0% | |
| GATCTCAACAATTTCAAACA+AGG | + | chr7_3:30940561-30940580 | None:intergenic | 30.0% | |
| AAAAGAAAGAAACAACCATG+TGG | - | chr7_3:30940740-30940759 | Msa1100680:intron | 30.0% | |
| AAAGAAAGAAACAACCATGT+GGG | - | chr7_3:30940741-30940760 | Msa1100680:intron | 30.0% | |
| !!! | TGGGATAGTAGAATGTTTTT+TGG | - | chr7_3:30940760-30940779 | Msa1100680:intron | 30.0% |
| !!! | GGGATAGTAGAATGTTTTTT+GGG | - | chr7_3:30940761-30940780 | Msa1100680:intron | 30.0% |
| !!! | GTAGAATGTTTTTTGGGAAT+TGG | - | chr7_3:30940767-30940786 | Msa1100680:intron | 30.0% |
| ! | ATGTTGACTAATCATAGCAA+TGG | + | chr7_3:30940935-30940954 | None:intergenic | 30.0% |
| ! | ATTGCTATGATTAGTCAACA+TGG | - | chr7_3:30940934-30940953 | Msa1100680:intron | 30.0% |
| ATAGGATGACAAAACAAAGT+GGG | + | chr7_3:30941092-30941111 | None:intergenic | 30.0% | |
| AATAGGATGACAAAACAAAG+TGG | + | chr7_3:30941093-30941112 | None:intergenic | 30.0% | |
| ! | TTTTCATGTATTCTGCAACA+GGG | - | chr7_3:30941211-30941230 | Msa1100680:CDS | 30.0% |
| ATTGTCATAAATCTTCCACT+TGG | + | chr7_3:30941258-30941277 | None:intergenic | 30.0% | |
| GTGGAAGATTTATGACAATT+TGG | - | chr7_3:30941259-30941278 | Msa1100680:CDS | 30.0% | |
| !!! | CTTTGGAATTGAAGATTTTG+AGG | - | chr7_3:30941292-30941311 | Msa1100680:CDS | 30.0% |
| !! | TGAAGATTTTGAGGATTTGA+AGG | - | chr7_3:30941301-30941320 | Msa1100680:CDS | 30.0% |
| GAGAAAAAGATAAATGCTTG+CGG | + | chr7_3:30941376-30941395 | None:intergenic | 30.0% | |
| TGAATTATGATTGCATGTGT+TGG | - | chr7_3:30941514-30941533 | Msa1100680:CDS | 30.0% | |
| GAATTATGATTGCATGTGTT+GGG | - | chr7_3:30941515-30941534 | Msa1100680:CDS | 30.0% | |
| ! | TTGGGCTTGTTTAAGAAAAA+TGG | - | chr7_3:30941533-30941552 | Msa1100680:CDS | 30.0% |
| ! | CACTTCAACATTACGATTTT+AGG | + | chr7_3:30941581-30941600 | None:intergenic | 30.0% |
| AAACAAAAATCAATCTAGGG+TGG | - | chr7_3:30941639-30941658 | Msa1100680:exon | 30.0% | |
| AAGCCATAATCAAAGATCTA+AGG | - | chr7_3:30941677-30941696 | Msa1100680:five_prime_UTR | 30.0% | |
| ! | TAGCCTTAGATCTTTGATTA+TGG | + | chr7_3:30941683-30941702 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTCGTTTTGGTG+TGG | + | chr7_3:30936252-30936271 | None:intergenic | 35.0% |
| CACCAAAACGACACAAAAAA+TGG | - | chr7_3:30936252-30936271 | Msa1100680:three_prime_UTR | 35.0% | |
| ! | ATGAATCGTTTTGCTTGCAT+CGG | + | chr7_3:30936716-30936735 | None:intergenic | 35.0% |
| AGAATGCAATCACATGTATC+AGG | + | chr7_3:30937819-30937838 | None:intergenic | 35.0% | |
| TGCTGTGGTTGAATTTAATG+AGG | - | chr7_3:30938082-30938101 | Msa1100680:intron | 35.0% | |
| TATTGAATCAGTGAACTGGA+AGG | - | chr7_3:30938116-30938135 | Msa1100680:intron | 35.0% | |
| ATTGAATCAGTGAACTGGAA+GGG | - | chr7_3:30938117-30938136 | Msa1100680:intron | 35.0% | |
| ! | TGACTACTACTGATTGTTAC+AGG | - | chr7_3:30938225-30938244 | Msa1100680:intron | 35.0% |
| TGAGTTACCTAAAGAAACAC+GGG | + | chr7_3:30938373-30938392 | None:intergenic | 35.0% | |
| CTGAGTTACCTAAAGAAACA+CGG | + | chr7_3:30938374-30938393 | None:intergenic | 35.0% | |
| AGACAAGTAGGAGCTAATTA+AGG | + | chr7_3:30938455-30938474 | None:intergenic | 35.0% | |
| AAATTTCCAGGAAGACAAGT+AGG | + | chr7_3:30938467-30938486 | None:intergenic | 35.0% | |
| CTCTCCACATAAAAATTTCC+AGG | + | chr7_3:30938479-30938498 | None:intergenic | 35.0% | |
| ! | TATATCTTATTGGTTGGGTG+TGG | - | chr7_3:30938600-30938619 | Msa1100680:intron | 35.0% |
| TTATGCTTCCTTTCTGAACT+GGG | - | chr7_3:30938633-30938652 | Msa1100680:intron | 35.0% | |
| !!! | ATGGTTTTGTACAAATGTGC+AGG | - | chr7_3:30938849-30938868 | Msa1100680:intron | 35.0% |
| !! | TTATTTCTGGTTCAGGTACT+TGG | - | chr7_3:30939151-30939170 | Msa1100680:CDS | 35.0% |
| ! | TTTTCATGCCTCTGATGAAT+AGG | + | chr7_3:30939374-30939393 | None:intergenic | 35.0% |
| TTCCCGCTAAAATCAAGATA+TGG | + | chr7_3:30939801-30939820 | None:intergenic | 35.0% | |
| GGTGATAAATAGCCAATAAG+CGG | - | chr7_3:30939834-30939853 | Msa1100680:intron | 35.0% | |
| GGAATTGCCATTCAAATTTG+TGG | - | chr7_3:30940215-30940234 | Msa1100680:intron | 35.0% | |
| CTTGCAACCACAAATTTGAA+TGG | + | chr7_3:30940225-30940244 | None:intergenic | 35.0% | |
| TTGCCAATAATGCAGATTGA+TGG | - | chr7_3:30940294-30940313 | Msa1100680:intron | 35.0% | |
| TCTCCATCAATCTGCATTAT+TGG | + | chr7_3:30940300-30940319 | None:intergenic | 35.0% | |
| CAAAAGAGGCAGCAATATAT+GGG | + | chr7_3:30940362-30940381 | None:intergenic | 35.0% | |
| TGAGTACCAGTAAGACAAAA+TGG | + | chr7_3:30940415-30940434 | None:intergenic | 35.0% | |
| TTGTCTTACTGGTACTCATT+TGG | - | chr7_3:30940417-30940436 | Msa1100680:intron | 35.0% | |
| TTAGTCTATCTCTCTCCAAA+TGG | + | chr7_3:30940606-30940625 | None:intergenic | 35.0% | |
| TTTGGAGAGAGATAGACTAA+TGG | - | chr7_3:30940606-30940625 | Msa1100680:intron | 35.0% | |
| CTATCTATTCTCTCTCCAAT+TGG | - | chr7_3:30940674-30940693 | Msa1100680:intron | 35.0% | |
| ! | GAAGTGTCTATTAAATGGAG+AGG | - | chr7_3:30940696-30940715 | Msa1100680:intron | 35.0% |
| CTATTAAATGGAGAGGATCT+TGG | - | chr7_3:30940703-30940722 | Msa1100680:intron | 35.0% | |
| AAACATTCTACTATCCCACA+TGG | + | chr7_3:30940758-30940777 | None:intergenic | 35.0% | |
| TTCTTAGGAGTTCCAAACAA+GGG | + | chr7_3:30940796-30940815 | None:intergenic | 35.0% | |
| TTTCTTAGGAGTTCCAAACA+AGG | + | chr7_3:30940797-30940816 | None:intergenic | 35.0% | |
| !!! | AAGTGTTTTCTGAAGTAGGA+GGG | + | chr7_3:30940845-30940864 | None:intergenic | 35.0% |
| TCAGAAAACACTTCACCAAT+TGG | - | chr7_3:30940852-30940871 | Msa1100680:intron | 35.0% | |
| AAACACTTCACCAATTGGAA+AGG | - | chr7_3:30940857-30940876 | Msa1100680:intron | 35.0% | |
| TCTCTTTCAACCTTTCCAAT+TGG | + | chr7_3:30940870-30940889 | None:intergenic | 35.0% | |
| ! | CTTTTCATGTATTCTGCAAC+AGG | - | chr7_3:30941210-30941229 | Msa1100680:CDS | 35.0% |
| ! | AATTTGGTTCGATTCAGCTT+TGG | - | chr7_3:30941275-30941294 | Msa1100680:CDS | 35.0% |
| ! | TTCTCTCTTGTTATCTTGTC+TGG | - | chr7_3:30941482-30941501 | Msa1100680:CDS | 35.0% |
| ! | TCATCATTTGGTTGGTGTAG+AGG | - | chr7_3:30936185-30936204 | Msa1100680:three_prime_UTR | 40.0% |
| ! | TGGTGTGGTTAGGTTTTTCT+TGG | + | chr7_3:30936237-30936256 | None:intergenic | 40.0% |
| !!! | GGCCATTTTTTGTGTCGTTT+TGG | + | chr7_3:30936257-30936276 | None:intergenic | 40.0% |
| TATTATGCAGCTGAGAGACT+TGG | - | chr7_3:30937359-30937378 | Msa1100680:intron | 40.0% | |
| TACTTGTAAGCTACGAAGCA+CGG | - | chr7_3:30937524-30937543 | Msa1100680:CDS | 40.0% | |
| ! | CAATCGACACTTTTGATCGA+AGG | + | chr7_3:30937663-30937682 | None:intergenic | 40.0% |
| TGTAGACCGACACTTTATTG+AGG | - | chr7_3:30937758-30937777 | Msa1100680:CDS | 40.0% | |
| GTAGACCGACACTTTATTGA+GGG | - | chr7_3:30937759-30937778 | Msa1100680:CDS | 40.0% | |
| ACATGCCCTCAATAAAGTGT+CGG | + | chr7_3:30937767-30937786 | None:intergenic | 40.0% | |
| ! | TGAGGGCATGTTTGAAGTTT+CGG | - | chr7_3:30937776-30937795 | Msa1100680:CDS | 40.0% |
| ACAATACCAACACTGACACA+TGG | + | chr7_3:30937872-30937891 | None:intergenic | 40.0% | |
| AGTTATGAATATGGGCGCTA+TGG | - | chr7_3:30937966-30937985 | Msa1100680:intron | 40.0% | |
| !!! | CTGTTTTGGAGGAGAAGATA+AGG | - | chr7_3:30938003-30938022 | Msa1100680:intron | 40.0% |
| TTGAATCAGTGAACTGGAAG+GGG | - | chr7_3:30938118-30938137 | Msa1100680:intron | 40.0% | |
| ! | TCAACTATCTTGATGGCATC+TGG | - | chr7_3:30938146-30938165 | Msa1100680:intron | 40.0% |
| ! | CAACTATCTTGATGGCATCT+GGG | - | chr7_3:30938147-30938166 | Msa1100680:intron | 40.0% |
| CTGATTGTTACAGGAAGACT+AGG | - | chr7_3:30938234-30938253 | Msa1100680:intron | 40.0% | |
| AGAGACTGTTCTTCCAAAGA+TGG | - | chr7_3:30938265-30938284 | Msa1100680:intron | 40.0% | |
| GAGACTGTTCTTCCAAAGAT+GGG | - | chr7_3:30938266-30938285 | Msa1100680:intron | 40.0% | |
| AGACTGTTCTTCCAAAGATG+GGG | - | chr7_3:30938267-30938286 | Msa1100680:intron | 40.0% | |
| TTATGGTCCCGTGTTTCTTT+AGG | - | chr7_3:30938363-30938382 | Msa1100680:intron | 40.0% | |
| GTTATGCTTCCTTTCTGAAC+TGG | - | chr7_3:30938632-30938651 | Msa1100680:intron | 40.0% | |
| AGCAGAACAAGGTTAGTGTT+GGG | - | chr7_3:30938774-30938793 | Msa1100680:intron | 40.0% | |
| AACACATCTCAGGAATGGAT+TGG | + | chr7_3:30938902-30938921 | None:intergenic | 40.0% | |
| ATGTCAACACATCTCAGGAA+TGG | + | chr7_3:30938907-30938926 | None:intergenic | 40.0% | |
| GCTTAATGTCAACACATCTC+AGG | + | chr7_3:30938912-30938931 | None:intergenic | 40.0% | |
| ! | GAGATGTGTTGACATTAAGC+TGG | - | chr7_3:30938912-30938931 | Msa1100680:CDS | 40.0% |
| TCAGAACTTTGCCACAAGAA+TGG | - | chr7_3:30938937-30938956 | Msa1100680:CDS | 40.0% | |
| CAGAACTTTGCCACAAGAAT+GGG | - | chr7_3:30938938-30938957 | Msa1100680:CDS | 40.0% | |
| AGAACTTTGCCACAAGAATG+GGG | - | chr7_3:30938939-30938958 | Msa1100680:CDS | 40.0% | |
| CATAACCAAATCAGCACCAA+GGG | + | chr7_3:30939019-30939038 | None:intergenic | 40.0% | |
| CACTCTTGTACGAAGTACAT+CGG | - | chr7_3:30939039-30939058 | Msa1100680:intron | 40.0% | |
| GCTTGTAGTAATGACTAACC+GGG | + | chr7_3:30939252-30939271 | None:intergenic | 40.0% | |
| GGCTTGTAGTAATGACTAAC+CGG | + | chr7_3:30939253-30939272 | None:intergenic | 40.0% | |
| TAACATGTTCGCACTATGTC+AGG | + | chr7_3:30939336-30939355 | None:intergenic | 40.0% | |
| GTACAGCAACAGAATTCAAC+CGG | - | chr7_3:30939408-30939427 | Msa1100680:intron | 40.0% | |
| AACAGAATTCAACCGGAATG+AGG | - | chr7_3:30939415-30939434 | Msa1100680:intron | 40.0% | |
| TAGTAATGCCATGGTACCTT+GGG | + | chr7_3:30939465-30939484 | None:intergenic | 40.0% | |
| ATAGTAATGCCATGGTACCT+TGG | + | chr7_3:30939466-30939485 | None:intergenic | 40.0% | |
| CTGAGAAAGGATTCACAGTA+AGG | + | chr7_3:30939560-30939579 | None:intergenic | 40.0% | |
| CTTACTGTGAATCCTTTCTC+AGG | - | chr7_3:30939558-30939577 | Msa1100680:intron | 40.0% | |
| CAATCACAGATACCGCTTAT+TGG | + | chr7_3:30939849-30939868 | None:intergenic | 40.0% | |
| CTTAAGCACATCAATCCCAA+AGG | + | chr7_3:30939924-30939943 | None:intergenic | 40.0% | |
| !! | GATGTGCTTAAGCTGTTTTG+TGG | - | chr7_3:30939932-30939951 | Msa1100680:CDS | 40.0% |
| CCAAAAGAGGCAGCAATATA+TGG | + | chr7_3:30940363-30940382 | None:intergenic | 40.0% | |
| ! | CCATATATTGCTGCCTCTTT+TGG | - | chr7_3:30940360-30940379 | Msa1100680:intron | 40.0% |
| ! | TATATTGCTGCCTCTTTTGG+TGG | - | chr7_3:30940363-30940382 | Msa1100680:intron | 40.0% |
| TACCAGTAAGACAAAATGGC+CGG | + | chr7_3:30940411-30940430 | None:intergenic | 40.0% | |
| ACACTACTTGTCATGTGCTA+TGG | - | chr7_3:30940475-30940494 | Msa1100680:CDS | 40.0% | |
| ! | AACAAGGCGTAAAAGCACAA+AGG | + | chr7_3:30940545-30940564 | None:intergenic | 40.0% |
| TTGAGATCCTCTCCATTTGA+TGG | - | chr7_3:30940573-30940592 | Msa1100680:intron | 40.0% | |
| TGAGATCCTCTCCATTTGAT+GGG | - | chr7_3:30940574-30940593 | Msa1100680:intron | 40.0% | |
| !! | AATGGAAGTGTCCCATCAAA+TGG | + | chr7_3:30940588-30940607 | None:intergenic | 40.0% |
| TTTGATGGGACACTTCCATT+TGG | - | chr7_3:30940588-30940607 | Msa1100680:intron | 40.0% | |
| AATGGAGAGGATCTTGGAAT+AGG | - | chr7_3:30940709-30940728 | Msa1100680:intron | 40.0% | |
| ATGGAGAGGATCTTGGAATA+GGG | - | chr7_3:30940710-30940729 | Msa1100680:intron | 40.0% | |
| !!! | GAAGTGTTTTCTGAAGTAGG+AGG | + | chr7_3:30940846-30940865 | None:intergenic | 40.0% |
| !!! | GGTGAAGTGTTTTCTGAAGT+AGG | + | chr7_3:30940849-30940868 | None:intergenic | 40.0% |
| AATCATAGCAATGGCATGAG+TGG | + | chr7_3:30940926-30940945 | None:intergenic | 40.0% | |
| AGAACACCCAAATCAGTTCA+AGG | + | chr7_3:30941459-30941478 | None:intergenic | 40.0% | |
| ! | ATCAAAGATCTAAGGCTAGC+TGG | - | chr7_3:30941685-30941704 | Msa1100680:five_prime_UTR | 40.0% |
| ! | TTGGTTGGTGTAGAGGAAGT+AGG | - | chr7_3:30936192-30936211 | Msa1100680:three_prime_UTR | 45.0% |
| !!! | TGTGTCGTTTTGGTGTGGTT+AGG | + | chr7_3:30936247-30936266 | None:intergenic | 45.0% |
| AACGCGGTGGAAACTTGAAA+CGG | + | chr7_3:30936278-30936297 | None:intergenic | 45.0% | |
| AGGTTGTTGGGAAATGACGA+CGG | + | chr7_3:30936372-30936391 | None:intergenic | 45.0% | |
| GCTGGAAATTGGGAGGAAAA+CGG | + | chr7_3:30936432-30936451 | None:intergenic | 45.0% | |
| ! | CTGAGTTGACGCTGGAAATT+GGG | + | chr7_3:30936442-30936461 | None:intergenic | 45.0% |
| TCGTGGTCTAATGAAGGAAC+CGG | - | chr7_3:30936517-30936536 | Msa1100680:three_prime_UTR | 45.0% | |
| GCAAGCAAAACGATTCATGC+CGG | - | chr7_3:30936718-30936737 | Msa1100680:intron | 45.0% | |
| TGATGGAATTACCACTCCTG+TGG | - | chr7_3:30937397-30937416 | Msa1100680:intron | 45.0% | |
| CACTGACACTTGTCAGACAT+TGG | - | chr7_3:30937632-30937651 | Msa1100680:intron | 45.0% | |
| ! | CAACCCAACCAGTACTGTTT+TGG | - | chr7_3:30937989-30938008 | Msa1100680:intron | 45.0% |
| !! | CCTCCAAAACAGTACTGGTT+GGG | + | chr7_3:30937995-30938014 | None:intergenic | 45.0% |
| !! | TCCTCCAAAACAGTACTGGT+TGG | + | chr7_3:30937996-30938015 | None:intergenic | 45.0% |
| CTTCTCCTCCAAAACAGTAC+TGG | + | chr7_3:30938000-30938019 | None:intergenic | 45.0% | |
| GGCTGAGTCAACTATCTTGA+TGG | - | chr7_3:30938139-30938158 | Msa1100680:intron | 45.0% | |
| ! | TGCTAGCATAGTCTTGCTGA+TGG | - | chr7_3:30938175-30938194 | Msa1100680:intron | 45.0% |
| AGTAGTCACAAGATGTCCAC+CGG | + | chr7_3:30938213-30938232 | None:intergenic | 45.0% | |
| TCTTCCAAAGATGGGGATCA+CGG | - | chr7_3:30938274-30938293 | Msa1100680:intron | 45.0% | |
| TTAGCTCCTACTTGTCTTCC+TGG | - | chr7_3:30938458-30938477 | Msa1100680:intron | 45.0% | |
| ! | ATCTTATTGGTTGGGTGTGG+TGG | - | chr7_3:30938603-30938622 | Msa1100680:intron | 45.0% |
| !! | ATCTGCTTTGGAGCAGAACA+AGG | - | chr7_3:30938763-30938782 | Msa1100680:intron | 45.0% |
| GAGCAGAACAAGGTTAGTGT+TGG | - | chr7_3:30938773-30938792 | Msa1100680:intron | 45.0% | |
| !! | GAATGGATTGGTAGGAGACT+CGG | + | chr7_3:30938890-30938909 | None:intergenic | 45.0% |
| !! | CATCTCAGGAATGGATTGGT+AGG | + | chr7_3:30938898-30938917 | None:intergenic | 45.0% |
| GCATAACCAAATCAGCACCA+AGG | + | chr7_3:30939020-30939039 | None:intergenic | 45.0% | |
| TCTTGTACGAAGTACATCGG+TGG | - | chr7_3:30939042-30939061 | Msa1100680:intron | 45.0% | |
| !! | TTTCTGGTTCAGGTACTTGG+TGG | - | chr7_3:30939154-30939173 | Msa1100680:CDS | 45.0% |
| GCTGCATACCTATTCATCAG+AGG | - | chr7_3:30939363-30939382 | Msa1100680:intron | 45.0% | |
| GAATTCAACCGGAATGAGGA+TGG | - | chr7_3:30939419-30939438 | Msa1100680:intron | 45.0% | |
| AAGTTTGGCCATCCTCATTC+CGG | + | chr7_3:30939430-30939449 | None:intergenic | 45.0% | |
| ! | GAGGATGGCCAAACTTTTAG+AGG | - | chr7_3:30939434-30939453 | Msa1100680:intron | 45.0% |
| ! | GGGATGTGCCTCTAAAAGTT+TGG | + | chr7_3:30939445-30939464 | None:intergenic | 45.0% |
| !! | ACTTTTAGAGGCACATCCCA+AGG | - | chr7_3:30939446-30939465 | Msa1100680:intron | 45.0% |
| AAGGATTCACAGTAAGGCCA+TGG | + | chr7_3:30939554-30939573 | None:intergenic | 45.0% | |
| TGAATCCTTTCTCAGGCTAC+TGG | - | chr7_3:30939565-30939584 | Msa1100680:intron | 45.0% | |
| GAATCCTTTCTCAGGCTACT+GGG | - | chr7_3:30939566-30939585 | Msa1100680:intron | 45.0% | |
| AAATCCCAGTAGCCTGAGAA+AGG | + | chr7_3:30939573-30939592 | None:intergenic | 45.0% | |
| ! | AGCGGGAAACAAAAGTGCAA+AGG | - | chr7_3:30939813-30939832 | Msa1100680:intron | 45.0% |
| ! | GCGGTATCTGTGATTGATTC+AGG | - | chr7_3:30939853-30939872 | Msa1100680:intron | 45.0% |
| AGCTCATGTTCAGGATGACT+TGG | + | chr7_3:30940146-30940165 | None:intergenic | 45.0% | |
| AAAACCAGTCATCTGCCTCA+TGG | + | chr7_3:30940171-30940190 | None:intergenic | 45.0% | |
| !!! | ATGAGGCAGATGACTGGTTT+TGG | - | chr7_3:30940170-30940189 | Msa1100680:intron | 45.0% |
| !!! | TGAGGCAGATGACTGGTTTT+GGG | - | chr7_3:30940171-30940190 | Msa1100680:intron | 45.0% |
| !! | AACCGGCCATTTTGTCTTAC+TGG | - | chr7_3:30940406-30940425 | Msa1100680:intron | 45.0% |
| AAGTGTCCCATCAAATGGAG+AGG | + | chr7_3:30940583-30940602 | None:intergenic | 45.0% | |
| AATACAGCTACAAAGGACCC+AGG | + | chr7_3:30941186-30941205 | None:intergenic | 45.0% | |
| TTTGAAGGCTGATGTCTTGC+AGG | - | chr7_3:30941316-30941335 | Msa1100680:CDS | 45.0% | |
| ! | TGAAACCAGTATTTGCTGCG+CGG | - | chr7_3:30941424-30941443 | Msa1100680:CDS | 45.0% |
| AATATCCGCGCAGCAAATAC+TGG | + | chr7_3:30941432-30941451 | None:intergenic | 45.0% | |
| !! | CATAATAAAAAAAAAAAATA+AGG | + | chr7_3:30940898-30940917 | None:intergenic | 5.0% |
| GGTGTAGAGGAAGTAGGTGT+AGG | - | chr7_3:30936198-30936217 | Msa1100680:three_prime_UTR | 50.0% | |
| ATTCGAAGGTGAAAACGCGG+TGG | + | chr7_3:30936291-30936310 | None:intergenic | 50.0% | |
| GGCATTCGAAGGTGAAAACG+CGG | + | chr7_3:30936294-30936313 | None:intergenic | 50.0% | |
| AGGTGAAATCGGGATCGGAA+CGG | + | chr7_3:30936315-30936334 | None:intergenic | 50.0% | |
| AAGGGAGGTGAAATCGGGAT+CGG | + | chr7_3:30936320-30936339 | None:intergenic | 50.0% | |
| GATGGAAGGGAGGTGAAATC+GGG | + | chr7_3:30936325-30936344 | None:intergenic | 50.0% | |
| GGATGGAAGGGAGGTGAAAT+CGG | + | chr7_3:30936326-30936345 | None:intergenic | 50.0% | |
| ! | GTGGTTTTCGGTGGATGGAA+GGG | + | chr7_3:30936338-30936357 | None:intergenic | 50.0% |
| TTGTTGGGAAATGACGACGG+CGG | + | chr7_3:30936369-30936388 | None:intergenic | 50.0% | |
| TTGGGAGGAAAACGGAGGAT+GGG | + | chr7_3:30936424-30936443 | None:intergenic | 50.0% | |
| ATTGGGAGGAAAACGGAGGA+TGG | + | chr7_3:30936425-30936444 | None:intergenic | 50.0% | |
| GGAAATTGGGAGGAAAACGG+AGG | + | chr7_3:30936429-30936448 | None:intergenic | 50.0% | |
| AGTTGACGCTGGAAATTGGG+AGG | + | chr7_3:30936439-30936458 | None:intergenic | 50.0% | |
| ! | GCTGAGTTGACGCTGGAAAT+TGG | + | chr7_3:30936443-30936462 | None:intergenic | 50.0% |
| CGTCGTAACTGCAGCAACAT+CGG | - | chr7_3:30936472-30936491 | Msa1100680:three_prime_UTR | 50.0% | |
| GCTGCTTCGTGGTCTAATGA+AGG | - | chr7_3:30936511-30936530 | Msa1100680:three_prime_UTR | 50.0% | |
| CGTGGTCTAATGAAGGAACC+GGG | - | chr7_3:30936518-30936537 | Msa1100680:three_prime_UTR | 50.0% | |
| ! | ATTTTCGCCGACATCGCCAT+CGG | + | chr7_3:30936647-30936666 | None:intergenic | 50.0% |
| ATGGCGATGTCGGCGAAAAT+GGG | - | chr7_3:30936647-30936666 | Msa1100680:CDS | 50.0% | |
| ! | ATGCAGCTGAGAGACTTGGT+AGG | - | chr7_3:30937363-30937382 | Msa1100680:intron | 50.0% |
| ! | TGCAGCTGAGAGACTTGGTA+GGG | - | chr7_3:30937364-30937383 | Msa1100680:intron | 50.0% |
| GGTAGGGCTATTGTGACTGA+TGG | - | chr7_3:30937380-30937399 | Msa1100680:intron | 50.0% | |
| !! | AGAAGTGTTCACCACAGGAG+TGG | + | chr7_3:30937411-30937430 | None:intergenic | 50.0% |
| !! | TAGGCAGAAGTGTTCACCAC+AGG | + | chr7_3:30937416-30937435 | None:intergenic | 50.0% |
| TAAGCTACGAAGCACGGACA+CGG | - | chr7_3:30937530-30937549 | Msa1100680:CDS | 50.0% | |
| CTGTGTCCATGTGTCAGTGT+TGG | - | chr7_3:30937863-30937882 | Msa1100680:intron | 50.0% | |
| !! | CCCAACCAGTACTGTTTTGG+AGG | - | chr7_3:30937992-30938011 | Msa1100680:intron | 50.0% |
| CATACCGTGATCCCCATCTT+TGG | + | chr7_3:30938281-30938300 | None:intergenic | 50.0% | |
| TGCAAGTGCCCAGTTCAGAA+AGG | + | chr7_3:30938644-30938663 | None:intergenic | 50.0% | |
| CCACAGATGTCTGCTCAACA+AGG | + | chr7_3:30938715-30938734 | None:intergenic | 50.0% | |
| CCTTGTTGAGCAGACATCTG+TGG | - | chr7_3:30938712-30938731 | Msa1100680:CDS | 50.0% | |
| GTGGTTGATCCTGCTGATGT+TGG | - | chr7_3:30938731-30938750 | Msa1100680:CDS | 50.0% | |
| TGGAGCCTTGCAATCTGCTT+TGG | - | chr7_3:30938751-30938770 | Msa1100680:intron | 50.0% | |
| CTGCTCCAAAGCAGATTGCA+AGG | + | chr7_3:30938759-30938778 | None:intergenic | 50.0% | |
| TGCTACGCCTTTGAACCAGA+AGG | - | chr7_3:30938987-30939006 | Msa1100680:CDS | 50.0% | |
| CAAATCAGCACCAAGGGCAA+GGG | + | chr7_3:30939013-30939032 | None:intergenic | 50.0% | |
| ! | GTACTTGGTGGTTGCATCAG+TGG | - | chr7_3:30939166-30939185 | Msa1100680:CDS | 50.0% |
| GTAATGCCATGGCATTGCCA+TGG | - | chr7_3:30939534-30939553 | Msa1100680:intron | 50.0% | |
| GTGAAGCGTGTCTACTATCC+AGG | - | chr7_3:30940116-30940135 | Msa1100680:intron | 50.0% | |
| CTCATGGCAAGCTCATGTTC+AGG | + | chr7_3:30940155-30940174 | None:intergenic | 50.0% | |
| CTGAACATGAGCTTGCCATG+AGG | - | chr7_3:30940153-30940172 | Msa1100680:intron | 50.0% | |
| !!! | GAGGCAGATGACTGGTTTTG+GGG | - | chr7_3:30940172-30940191 | Msa1100680:intron | 50.0% |
| !!! | AGGCAGATGACTGGTTTTGG+GGG | - | chr7_3:30940173-30940192 | Msa1100680:intron | 50.0% |
| !!! | GGTGTGGTCAGTTTTGAGGT+GGG | - | chr7_3:30940194-30940213 | Msa1100680:intron | 50.0% |
| !! | CGAGAGCATTGTGGATCAAC+CGG | - | chr7_3:30940389-30940408 | Msa1100680:intron | 50.0% |
| GGGAATTGGGTTCCCTTGTT+TGG | - | chr7_3:30940781-30940800 | Msa1100680:intron | 50.0% | |
| GGACCTTCCTGCATCAGAAA+GGG | - | chr7_3:30941232-30941251 | Msa1100680:CDS | 50.0% | |
| ! | GTTTTCGGTGGATGGAAGGG+AGG | + | chr7_3:30936335-30936354 | None:intergenic | 55.0% |
| ! | GGTGGTTTTCGGTGGATGGA+AGG | + | chr7_3:30936339-30936358 | None:intergenic | 55.0% |
| !!! | TGGTGGTGGTTTTCGGTGGA+TGG | + | chr7_3:30936343-30936362 | None:intergenic | 55.0% |
| !!! | GTTGTGGTGGTGGTTTTCGG+TGG | + | chr7_3:30936347-30936366 | None:intergenic | 55.0% |
| !!! | GCGGTTGTGGTGGTGGTTTT+CGG | + | chr7_3:30936350-30936369 | None:intergenic | 55.0% |
| CGGAGGAAAGGGAGGTTGTT+GGG | + | chr7_3:30936384-30936403 | None:intergenic | 55.0% | |
| AGGAAAACGGAGGATGGGAG+AGG | + | chr7_3:30936419-30936438 | None:intergenic | 55.0% | |
| !! | CTTTGGTGCTGAGTTGACGC+TGG | + | chr7_3:30936450-30936469 | None:intergenic | 55.0% |
| CACAAATCGTCGCTGCTTCG+TGG | - | chr7_3:30936500-30936519 | Msa1100680:three_prime_UTR | 55.0% | |
| TCGACAGCAGATGCAACAGC+CGG | + | chr7_3:30936580-30936599 | None:intergenic | 55.0% | |
| TGTCGATGCAACAACTGCGC+CGG | - | chr7_3:30936594-30936613 | Msa1100680:CDS | 55.0% | |
| ! | ACATCGGCGTCGAGGTCTAA+CGG | + | chr7_3:30936622-30936641 | None:intergenic | 55.0% |
| GATGGCGATGTCGGCGAAAA+TGG | - | chr7_3:30936646-30936665 | Msa1100680:CDS | 55.0% | |
| TGGCGATGTCGGCGAAAATG+GGG | - | chr7_3:30936648-30936667 | Msa1100680:CDS | 55.0% | |
| ! | CATAGTCTTGCTGATGGCGC+TGG | - | chr7_3:30938181-30938200 | Msa1100680:intron | 55.0% |
| TGCAAGGCTCCAACATCAGC+AGG | + | chr7_3:30938743-30938762 | None:intergenic | 55.0% | |
| CGAGCAAAGCCCCATTCTTG+TGG | + | chr7_3:30938951-30938970 | None:intergenic | 55.0% | |
| GGGGCTTTGCTCGTCATTGA+TGG | - | chr7_3:30938958-30938977 | Msa1100680:CDS | 55.0% | |
| !! | GCAAGGGCCTTCTGGTTCAA+AGG | + | chr7_3:30938997-30939016 | None:intergenic | 55.0% |
| CCAAATCAGCACCAAGGGCA+AGG | + | chr7_3:30939014-30939033 | None:intergenic | 55.0% | |
| !! | CCTTGCCCTTGGTGCTGATT+TGG | - | chr7_3:30939011-30939030 | Msa1100680:CDS | 55.0% |
| TTTGGGCGGTGCTCTTAACC+CGG | - | chr7_3:30939231-30939250 | Msa1100680:intron | 55.0% | |
| ! | AGGCACATCCCAAGGTACCA+TGG | - | chr7_3:30939454-30939473 | Msa1100680:intron | 55.0% |
| GTAAGGCCATGGCAATGCCA+TGG | + | chr7_3:30939543-30939562 | None:intergenic | 55.0% | |
| ! | TCAGGATGACTTGGCAAGCC+TGG | + | chr7_3:30940137-30940156 | None:intergenic | 55.0% |
| CTTGCCATGAGGCAGATGAC+TGG | - | chr7_3:30940164-30940183 | Msa1100680:intron | 55.0% | |
| !!! | GATGACTGGTTTTGGGGGTG+TGG | - | chr7_3:30940178-30940197 | Msa1100680:intron | 55.0% |
| !! | TGGGGGTGTGGTCAGTTTTG+AGG | - | chr7_3:30940190-30940209 | Msa1100680:intron | 55.0% |
| !!! | GGGTGTGGTCAGTTTTGAGG+TGG | - | chr7_3:30940193-30940212 | Msa1100680:intron | 55.0% |
| GGGACCTTCCTGCATCAGAA+AGG | - | chr7_3:30941231-30941250 | Msa1100680:CDS | 55.0% | |
| TGGCCCTTTCTGATGCAGGA+AGG | + | chr7_3:30941238-30941257 | None:intergenic | 55.0% | |
| CACTTGGCCCTTTCTGATGC+AGG | + | chr7_3:30941242-30941261 | None:intergenic | 55.0% | |
| CTGCATCAGAAAGGGCCAAG+TGG | - | chr7_3:30941240-30941259 | Msa1100680:CDS | 55.0% | |
| !! | GCAGGCACTGGAAGCCATAT+AGG | - | chr7_3:30941334-30941353 | Msa1100680:CDS | 55.0% |
| GGGATCGGAACGGCATTCGA+AGG | + | chr7_3:30936305-30936324 | None:intergenic | 60.0% | |
| AATGACGACGGCGGTTGTGG+TGG | + | chr7_3:30936360-30936379 | None:intergenic | 60.0% | |
| GGAAATGACGACGGCGGTTG+TGG | + | chr7_3:30936363-30936382 | None:intergenic | 60.0% | |
| GCGGAGGAAAGGGAGGTTGT+TGG | + | chr7_3:30936385-30936404 | None:intergenic | 60.0% | |
| GAGGATGGGAGAGGAGATGG+CGG | + | chr7_3:30936410-30936429 | None:intergenic | 60.0% | |
| ACGGAGGATGGGAGAGGAGA+TGG | + | chr7_3:30936413-30936432 | None:intergenic | 60.0% | |
| GCTGCAGTTACGACGCGCTT+TGG | + | chr7_3:30936467-30936486 | None:intergenic | 60.0% | |
| AATCGCTGGGGTTCCGACAC+CGG | - | chr7_3:30936552-30936571 | Msa1100680:three_prime_UTR | 60.0% | |
| ! | CATCGGCGTCGAGGTCTAAC+GGG | + | chr7_3:30936621-30936640 | None:intergenic | 60.0% |
| GACATCGCCATCGGCGACAT+CGG | + | chr7_3:30936638-30936657 | None:intergenic | 60.0% | |
| GATGTCGCCGATGGCGATGT+CGG | - | chr7_3:30936637-30936656 | Msa1100680:CDS | 60.0% | |
| GTCACAAGATGTCCACCGGC+TGG | + | chr7_3:30938209-30938228 | None:intergenic | 60.0% | |
| AACCAGAAGGCCCTTGCCCT+TGG | - | chr7_3:30939000-30939019 | Msa1100680:CDS | 60.0% | |
| GCTCTCGCAGCCACCAAAAG+AGG | + | chr7_3:30940376-30940395 | None:intergenic | 60.0% | |
| !! | TGGTGGCTGCGAGAGCATTG+TGG | - | chr7_3:30940380-30940399 | Msa1100680:intron | 60.0% |
| GGCTGATGTCTTGCAGGCAC+TGG | - | chr7_3:30941322-30941341 | Msa1100680:CDS | 60.0% | |
| ! | GATGGGAGAGGAGATGGCGG+CGG | + | chr7_3:30936407-30936426 | None:intergenic | 65.0% |
| GAAGGAACCGGGAACCCCAG+CGG | - | chr7_3:30936529-30936548 | Msa1100680:three_prime_UTR | 65.0% | |
| AGCGATTCCGCTGGGGTTCC+CGG | + | chr7_3:30936539-30936558 | None:intergenic | 65.0% | |
| GGAACCCCAGCGGAATCGCT+GGG | - | chr7_3:30936539-30936558 | Msa1100680:three_prime_UTR | 65.0% | |
| GAACCCCAGCGGAATCGCTG+GGG | - | chr7_3:30936540-30936559 | Msa1100680:three_prime_UTR | 65.0% | |
| GAACCCCAGCGATTCCGCTG+GGG | + | chr7_3:30936546-30936565 | None:intergenic | 65.0% | |
| GGAACCCCAGCGATTCCGCT+GGG | + | chr7_3:30936547-30936566 | None:intergenic | 65.0% | |
| GCAGATGCAACAGCCGGCAC+CGG | + | chr7_3:30936574-30936593 | None:intergenic | 65.0% | |
| GCGTCGAGGTCTAACGGGAC+CGG | + | chr7_3:30936616-30936635 | None:intergenic | 65.0% | |
| !! | CTGATGGCGCTGGTTCCAGC+CGG | - | chr7_3:30938191-30938210 | Msa1100680:intron | 65.0% |
| CACCAAGGGCAAGGGCCTTC+TGG | + | chr7_3:30939005-30939024 | None:intergenic | 65.0% | |
| GACGACGGCGGTTGTGGTGG+TGG | + | chr7_3:30936357-30936376 | None:intergenic | 70.0% | |
| ! | GATGGCGGCGGCGGAGGAAA+GGG | + | chr7_3:30936395-30936414 | None:intergenic | 70.0% |
| ! | AGATGGCGGCGGCGGAGGAA+AGG | + | chr7_3:30936396-30936415 | None:intergenic | 70.0% |
| GGGAACCCCAGCGGAATCGC+TGG | - | chr7_3:30936538-30936557 | Msa1100680:three_prime_UTR | 70.0% | |
| CGGAACCCCAGCGATTCCGC+TGG | + | chr7_3:30936548-30936567 | None:intergenic | 70.0% | |
| TGGGGTTCCGACACCGGTGC+CGG | - | chr7_3:30936558-30936577 | Msa1100680:exon | 70.0% | |
| !! | GCAACAGCCGGCACCGGTGT+CGG | + | chr7_3:30936568-30936587 | None:intergenic | 70.0% |
| CATCGGCGACATCGGCGTCG+AGG | + | chr7_3:30936630-30936649 | None:intergenic | 70.0% | |
| CTCGACGCCGATGTCGCCGA+TGG | - | chr7_3:30936628-30936647 | Msa1100680:CDS | 70.0% | |
| !! | ATGGCGCTGGTTCCAGCCGG+TGG | - | chr7_3:30938194-30938213 | Msa1100680:intron | 70.0% |
| ! | AGAGGAGATGGCGGCGGCGG+AGG | + | chr7_3:30936401-30936420 | None:intergenic | 75.0% |
| ! | GGGAGAGGAGATGGCGGCGG+CGG | + | chr7_3:30936404-30936423 | None:intergenic | 75.0% |
| ! | GGCGGCGGCGGAGGAAAGGG+AGG | + | chr7_3:30936392-30936411 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 30936178 | 30941750 | 30936178 | ID=Msa1100680;Name=Msa1100680 |
| chr7_3 | mRNA | 30936178 | 30941750 | 30936178 | ID=Msa1100680-mRNA-1;Parent=Msa1100680;Name=Msa1100680-mRNA-1;_AED=0.04;_eAED=0.04;_QI=93|1|1|1|1|1|11|395|537 |
| chr7_3 | exon | 30936178 | 30936696 | 30936178 | ID=Msa1100680-mRNA-1:exon:6571;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30937501 | 30937619 | 30937501 | ID=Msa1100680-mRNA-1:exon:6570;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30937717 | 30937812 | 30937717 | ID=Msa1100680-mRNA-1:exon:6569;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30938461 | 30938568 | 30938461 | ID=Msa1100680-mRNA-1:exon:6568;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30938676 | 30938762 | 30938676 | ID=Msa1100680-mRNA-1:exon:6567;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30938854 | 30939057 | 30938854 | ID=Msa1100680-mRNA-1:exon:6566;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30939144 | 30939203 | 30939144 | ID=Msa1100680-mRNA-1:exon:6565;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30939633 | 30939801 | 30939633 | ID=Msa1100680-mRNA-1:exon:6564;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30939904 | 30939977 | 30939904 | ID=Msa1100680-mRNA-1:exon:6563;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30940456 | 30940559 | 30940456 | ID=Msa1100680-mRNA-1:exon:6562;Parent=Msa1100680-mRNA-1 |
| chr7_3 | exon | 30941189 | 30941750 | 30941189 | ID=Msa1100680-mRNA-1:exon:6561;Parent=Msa1100680-mRNA-1 |
| chr7_3 | five_prime_UTR | 30941658 | 30941750 | 30941658 | ID=Msa1100680-mRNA-1:five_prime_utr;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30941189 | 30941657 | 30941189 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30940456 | 30940559 | 30940456 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30939904 | 30939977 | 30939904 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30939633 | 30939801 | 30939633 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30939144 | 30939203 | 30939144 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30938854 | 30939057 | 30938854 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30938676 | 30938762 | 30938676 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30938461 | 30938568 | 30938461 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30937717 | 30937812 | 30937717 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30937501 | 30937619 | 30937501 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | CDS | 30936573 | 30936696 | 30936573 | ID=Msa1100680-mRNA-1:cds;Parent=Msa1100680-mRNA-1 |
| chr7_3 | three_prime_UTR | 30936178 | 30936572 | 30936178 | ID=Msa1100680-mRNA-1:three_prime_utr;Parent=Msa1100680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
