Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007370 | XP_003621272.1 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007370 | sp|P55217|CGS1_ARATH | 79.753 | 405 | 81 | 1 | 133 | 537 | 160 | 563 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007370 | G7L227 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1095 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1007370 | Msa1049030 | 0.906489 | 1.404904e-80 | -8.615850e-47 |
| Msa1007370 | Msa1087400 | 0.833992 | 3.876834e-56 | -8.615850e-47 |
| Msa1007370 | Msa1100680 | 0.832394 | 9.693226e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007370 | MtrunA17_Chr7g0217761 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1095 |
| Msa1007370 | MtrunA17_Chr6g0453481 | 73.944 | 426 | 108 | 3 | 113 | 537 | 54 | 477 | 0.0 | 660 |
| Msa1007370 | MtrunA17_Chr1g0181151 | 36.391 | 338 | 211 | 4 | 198 | 534 | 129 | 463 | 9.88e-70 | 231 |
| Msa1007370 | MtrunA17_Chr3g0119851 | 29.730 | 333 | 219 | 7 | 198 | 519 | 92 | 420 | 2.37e-39 | 149 |
| Msa1007370 | MtrunA17_Chr1g0189071 | 28.743 | 334 | 222 | 8 | 198 | 519 | 93 | 422 | 1.09e-36 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007370 | AT3G01120.1 | 79.753 | 405 | 81 | 1 | 133 | 537 | 160 | 563 | 0.0 | 687 |
| Msa1007370 | AT1G33320.1 | 69.816 | 381 | 114 | 1 | 157 | 537 | 33 | 412 | 0.0 | 562 |
| Msa1007370 | AT1G33320.2 | 70.430 | 372 | 109 | 1 | 166 | 537 | 3 | 373 | 0.0 | 556 |
| Msa1007370 | AT1G33320.3 | 70.948 | 327 | 94 | 1 | 211 | 537 | 3 | 328 | 2.82e-173 | 492 |
| Msa1007370 | AT3G57050.5 | 34.795 | 365 | 226 | 6 | 167 | 530 | 24 | 377 | 4.49e-70 | 230 |
| Msa1007370 | AT3G57050.4 | 34.795 | 365 | 226 | 6 | 167 | 530 | 46 | 399 | 5.34e-70 | 230 |
| Msa1007370 | AT3G57050.2 | 34.795 | 365 | 226 | 6 | 167 | 530 | 87 | 440 | 1.10e-69 | 231 |
| Msa1007370 | AT3G57050.1 | 34.795 | 365 | 226 | 6 | 167 | 530 | 102 | 455 | 1.49e-69 | 231 |
| Msa1007370 | AT3G57050.3 | 34.397 | 282 | 174 | 5 | 167 | 447 | 102 | 373 | 2.62e-51 | 180 |
| Msa1007370 | AT1G64660.1 | 29.429 | 333 | 221 | 7 | 198 | 519 | 93 | 422 | 8.74e-40 | 150 |
Find 192 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGCGATGTTGGCGAAAA+TGG | 0.199597 | 7_1:+6860571 | Msa1007370:CDS |
| ATGAGGCAGATGACTGGTTT+TGG | 0.206527 | 7_1:+6864299 | Msa1007370:CDS |
| ATTAATTCCTTGAACTGATT+TGG | 0.218651 | 7_1:+6865616 | Msa1007370:three_prime_UTR |
| CCAAATGAGGCAGCAATATA+TGG | 0.229851 | 7_1:-6864489 | None:intergenic |
| GTGGAAGATTTATGACAATT+TGG | 0.239016 | 7_1:+6865418 | Msa1007370:CDS |
| TTGATTATGGCTTATTTGTT+GGG | 0.263165 | 7_1:-6865834 | None:intergenic |
| CGTCAAACTAGTTATGAATA+TGG | 0.263385 | 7_1:+6861878 | Msa1007370:CDS |
| CAGATACACGCAGCAAATAC+TGG | 0.264776 | 7_1:-6865588 | None:intergenic |
| GCTGAGTTGACGTTGGAAAT+TGG | 0.265209 | 7_1:-6860365 | None:intergenic |
| AGCGATTCCGCTGGGGTTCC+CGG | 0.268122 | 7_1:-6860461 | None:intergenic |
| TTCACATTCATTTCATCATT+TGG | 0.278874 | 7_1:+6860097 | None:intergenic |
| TGGGAGGAAAACGGAGGATT+GGG | 0.280235 | 7_1:-6860345 | None:intergenic |
| TTTGATTATGGCTTATTTGT+TGG | 0.285879 | 7_1:-6865835 | None:intergenic |
| TTCTTTCTGGTTCAGGTACT+TGG | 0.288738 | 7_1:+6863071 | Msa1007370:intron |
| CACCAAGGGCAAGGGCCTTC+TGG | 0.291162 | 7_1:-6862924 | None:intergenic |
| TAGCCTTAGATCTTTGATTA+TGG | 0.297456 | 7_1:-6865847 | None:intergenic |
| CCTTGCCCTTGGTGCTGATT+TGG | 0.297489 | 7_1:+6862933 | Msa1007370:CDS |
| TTAATTCCTTGAACTGATTT+GGG | 0.303748 | 7_1:+6865617 | Msa1007370:three_prime_UTR |
| CATACCTTGATCCCCATCTT+TGG | 0.307990 | 7_1:-6862199 | None:intergenic |
| CAACCCAACCAGTACTGTTT+TGG | 0.308335 | 7_1:+6861910 | Msa1007370:CDS |
| CCATATATTGCTGCCTCATT+TGG | 0.309206 | 7_1:+6864489 | Msa1007370:CDS |
| AATAATGAATAGTGCCTATA+TGG | 0.313919 | 7_1:-6865507 | None:intergenic |
| TGGAGCCTTGCAATCTGCTT+TGG | 0.315672 | 7_1:+6862673 | Msa1007370:CDS |
| TGGGGAGGAGATGGCGGCGG+CGG | 0.319848 | 7_1:-6860326 | None:intergenic |
| CACTTCAACATTACAATCAT+AGG | 0.326473 | 7_1:-6865751 | None:intergenic |
| TGACTACTACTGATTGTTAC+AGG | 0.328186 | 7_1:+6862146 | Msa1007370:CDS |
| CAGAACTTTGCCACAAGAAT+GGG | 0.332287 | 7_1:+6862860 | Msa1007370:CDS |
| CACTTGGCCCTTTCTGATGC+AGG | 0.349298 | 7_1:-6865398 | None:intergenic |
| TTTGAAGGCTGATGTCTTGC+AGG | 0.352504 | 7_1:+6865475 | Msa1007370:CDS |
| TCAACTATCTTGATGGCATC+TGG | 0.354904 | 7_1:+6862067 | Msa1007370:CDS |
| GGAGGAGATGGCGGCGGCGG+AGG | 0.356370 | 7_1:-6860323 | None:intergenic |
| ATGGCGATGTTGGCGAAAAT+GGG | 0.360407 | 7_1:+6860572 | Msa1007370:CDS |
| GGATGGAAGGGAGGTGAAAT+CGG | 0.370397 | 7_1:-6860248 | None:intergenic |
| AAGTTTGGCCATCCTCATTC+CGG | 0.375018 | 7_1:-6863622 | None:intergenic |
| AAGCCATAATCAAAGATCTA+AGG | 0.379390 | 7_1:+6865844 | Msa1007370:three_prime_UTR |
| TGAGTACCAGTAAGACAAAA+TGG | 0.381061 | 7_1:-6864541 | None:intergenic |
| AACCAGAAGGCCCTTGCCCT+TGG | 0.386207 | 7_1:+6862922 | Msa1007370:CDS |
| GCGGTTGTGGTGGTGGTTGT+CGG | 0.387999 | 7_1:-6860272 | None:intergenic |
| GGGATGTGCCTCTAAAAGTT+TGG | 0.394303 | 7_1:-6863637 | None:intergenic |
| CTGAGTTGACGTTGGAAATT+GGG | 0.394633 | 7_1:-6860364 | None:intergenic |
| TTGCCTATAATGCAGATTGA+TGG | 0.397473 | 7_1:+6864423 | Msa1007370:intron |
| CATTCATTTCATCATTTGGT+TGG | 0.399205 | 7_1:+6860101 | None:intergenic |
| TTGGGAGGAAAACGGAGGAT+TGG | 0.403682 | 7_1:-6860346 | None:intergenic |
| GATGGCGGCGGCGGAGGAAA+GGG | 0.406739 | 7_1:-6860317 | None:intergenic |
| GGAAATGACGACGGCGGTTG+TGG | 0.411184 | 7_1:-6860285 | None:intergenic |
| ATGATTGCGTAATGATGTAT+TGG | 0.413767 | 7_1:+6865687 | Msa1007370:three_prime_UTR |
| TCGTGGTCTAATGAAGGAAC+CGG | 0.414153 | 7_1:+6860442 | Msa1007370:CDS |
| GGCTGATGTCTTGCAGGCAC+TGG | 0.415737 | 7_1:+6865481 | Msa1007370:CDS |
| TGGTGGTGGTTGTCGGTGGA+TGG | 0.415993 | 7_1:-6860265 | None:intergenic |
| GGGGCTTTGCTCGTCATTGA+TGG | 0.416380 | 7_1:+6862880 | Msa1007370:CDS |
| TATATTGCTGCCTCATTTGG+TGG | 0.416975 | 7_1:+6864492 | Msa1007370:CDS |
| CTCATGGCAAGCTCATGTTC+AGG | 0.417754 | 7_1:-6864281 | None:intergenic |
| CGGAGGAAAGGGAGGTTGTT+GGG | 0.419778 | 7_1:-6860306 | None:intergenic |
| AATTTGGTTCGATTCAGCTT+TGG | 0.422581 | 7_1:+6865434 | Msa1007370:CDS |
| CACAAATCGTCGCTGCTTCG+TGG | 0.427715 | 7_1:+6860425 | Msa1007370:CDS |
| GCGGAGGAAAGGGAGGTTGT+TGG | 0.434286 | 7_1:-6860307 | None:intergenic |
| GCAGGCACTGGAAGCCATAT+AGG | 0.435135 | 7_1:+6865493 | Msa1007370:CDS |
| GGTGGTTGTCGGTGGATGGA+AGG | 0.436388 | 7_1:-6860261 | None:intergenic |
| TCAGAACTTTGCCACAAGAA+TGG | 0.438377 | 7_1:+6862859 | Msa1007370:CDS |
| GGCTGAGTCAACTATCTTGA+TGG | 0.438443 | 7_1:+6862060 | Msa1007370:CDS |
| GCTGCAGTTACGACGCGCTT+TGG | 0.438927 | 7_1:-6860389 | None:intergenic |
| TCATTATTGAATCAGTGAAC+TGG | 0.440444 | 7_1:+6862033 | Msa1007370:intron |
| GGGAGGAAAACGGAGGATTG+GGG | 0.442254 | 7_1:-6860344 | None:intergenic |
| AGATGGCGGCGGCGGAGGAA+AGG | 0.442378 | 7_1:-6860318 | None:intergenic |
| AATCGCTGGGGTTCCGACTC+CGG | 0.442689 | 7_1:+6860477 | Msa1007370:CDS |
| AGAGACTGTTCTTCCAAAGA+TGG | 0.448366 | 7_1:+6862186 | Msa1007370:CDS |
| TCAGGATGACTTGGCAAGCC+TGG | 0.449767 | 7_1:-6864263 | None:intergenic |
| CGGAACCCCAGCGATTCCGC+TGG | 0.450324 | 7_1:-6860470 | None:intergenic |
| CATAGTCTTGCTGATGGCGC+TGG | 0.451246 | 7_1:+6862102 | Msa1007370:CDS |
| GATGGAAGGGAGGTGAAATC+GGG | 0.452446 | 7_1:-6860247 | None:intergenic |
| CCTCCAAAACAGTACTGGTT+GGG | 0.455886 | 7_1:-6861913 | None:intergenic |
| TGATTGCGTAATGATGTATT+GGG | 0.466351 | 7_1:+6865688 | Msa1007370:three_prime_UTR |
| GGGAACCCCAGCGGAATCGC+TGG | 0.468113 | 7_1:+6860463 | Msa1007370:CDS |
| GTGAAGCGTGTCTACTATCC+AGG | 0.468909 | 7_1:+6864245 | Msa1007370:CDS |
| GTCAAACTAGTTATGAATAT+GGG | 0.469406 | 7_1:+6861879 | Msa1007370:CDS |
| CTTCTCCTCCAAAACAGTAC+TGG | 0.475513 | 7_1:-6861918 | None:intergenic |
| TTGGTTGGTGTAGAGGAAGT+AGG | 0.476270 | 7_1:+6860116 | Msa1007370:five_prime_UTR |
| GAGGATTGGGGAGGAGATGG+CGG | 0.478026 | 7_1:-6860332 | None:intergenic |
| ACGGAGGATTGGGGAGGAGA+TGG | 0.478713 | 7_1:-6860335 | None:intergenic |
| TTTCTGGTTCAGGTACTTGG+TGG | 0.484362 | 7_1:+6863074 | Msa1007370:intron |
| GACGACGGCGGTTGTGGTGG+TGG | 0.487789 | 7_1:-6860279 | None:intergenic |
| TGAATCAATAAATTTAATTG+TGG | 0.490973 | 7_1:-6864457 | None:intergenic |
| GAGACTGTTCTTCCAAAGAT+GGG | 0.491918 | 7_1:+6862187 | Msa1007370:CDS |
| GTGGTTGTCGGTGGATGGAA+GGG | 0.492437 | 7_1:-6860260 | None:intergenic |
| CAAATGAGGCAGCAATATAT+GGG | 0.493478 | 7_1:-6864488 | None:intergenic |
| GTACTTGGTGGTTGCATCAG+TGG | 0.493649 | 7_1:+6863086 | Msa1007370:CDS |
| TGGGGTTCCGACTCCGGTGC+CGG | 0.494956 | 7_1:+6860483 | Msa1007370:CDS |
| AGGAAAACGGAGGATTGGGG+AGG | 0.496197 | 7_1:-6860341 | None:intergenic |
| TGCAAGGCTCCAACATCAGC+AGG | 0.497319 | 7_1:-6862662 | None:intergenic |
| GATTGGGGAGGAGATGGCGG+CGG | 0.497453 | 7_1:-6860329 | None:intergenic |
| TGATTATGGCTTATTTGTTG+GGG | 0.499013 | 7_1:-6865833 | None:intergenic |
| AGAACACCCAAATCAGTTCA+AGG | 0.499699 | 7_1:-6865623 | None:intergenic |
| AGCTCATGTTCAGGATGACT+TGG | 0.511225 | 7_1:-6864272 | None:intergenic |
| TGTTGATGCAACCACTGCGC+CGG | 0.511415 | 7_1:+6860519 | Msa1007370:CDS |
| GGAACCCCAGCGGAATCGCT+GGG | 0.511727 | 7_1:+6860464 | Msa1007370:CDS |
| GTACAGCAACAGAATTCAAC+CGG | 0.512244 | 7_1:+6863603 | Msa1007370:CDS |
| GGAACCCCAGCGATTCCGCT+GGG | 0.516563 | 7_1:-6860469 | None:intergenic |
| AATGACGACGGCGGTTGTGG+TGG | 0.517746 | 7_1:-6860282 | None:intergenic |
| CAACTATCTTGATGGCATCT+GGG | 0.519100 | 7_1:+6862068 | Msa1007370:CDS |
| ATGGCGCTGGTTCCAGCCGG+TGG | 0.519978 | 7_1:+6862115 | Msa1007370:CDS |
| TCCTCCAAAACAGTACTGGT+TGG | 0.520178 | 7_1:-6861914 | None:intergenic |
| TCATCATTTGGTTGGTGTAG+AGG | 0.521132 | 7_1:+6860109 | Msa1007370:five_prime_UTR |
| TGGCTCTTTGAAGTTGATCT+CGG | 0.521731 | 7_1:+6863106 | Msa1007370:CDS |
| CTGATGGCGCTGGTTCCAGC+CGG | 0.524673 | 7_1:+6862112 | Msa1007370:CDS |
| GATGTCGCCGATGGCGATGT+TGG | 0.525700 | 7_1:+6860562 | Msa1007370:CDS |
| CTGATTGTTACAGGAAGACT+AGG | 0.526898 | 7_1:+6862155 | Msa1007370:CDS |
| TCTTCCAAAGATGGGGATCA+AGG | 0.529385 | 7_1:+6862195 | Msa1007370:CDS |
| GTCACAAGATGTCCACCGGC+TGG | 0.532380 | 7_1:-6862127 | None:intergenic |
| AACATCGCCATCGGCGACAT+CGG | 0.533590 | 7_1:-6860560 | None:intergenic |
| GTCTAACGGCACCGGCGCAG+TGG | 0.537483 | 7_1:-6860530 | None:intergenic |
| GTTGTCGGTGGATGGAAGGG+AGG | 0.538750 | 7_1:-6860257 | None:intergenic |
| GTTGTGGTGGTGGTTGTCGG+TGG | 0.540370 | 7_1:-6860269 | None:intergenic |
| GCTTAATGTCAACACATCTC+AGG | 0.544187 | 7_1:-6862831 | None:intergenic |
| TTGAATCAGTGAACTGGAAG+GGG | 0.544987 | 7_1:+6862039 | Msa1007370:intron |
| GGACCTTCCTGCATCAGAAA+GGG | 0.545206 | 7_1:+6865391 | Msa1007370:CDS |
| GGTGTAGAGGAAGTAGGTGT+AGG | 0.546764 | 7_1:+6860122 | Msa1007370:five_prime_UTR |
| GGGACCTTCCTGCATCAGAA+AGG | 0.547983 | 7_1:+6865390 | Msa1007370:intron |
| CCAAATCAGCACCAAGGGCA+AGG | 0.548480 | 7_1:-6862933 | None:intergenic |
| CTTGCCATGAGGCAGATGAC+TGG | 0.550800 | 7_1:+6864293 | Msa1007370:CDS |
| GCAAGGGCCTTCTGGTTCAA+AGG | 0.551371 | 7_1:-6862916 | None:intergenic |
| TGGCCCTTTCTGATGCAGGA+AGG | 0.552383 | 7_1:-6865394 | None:intergenic |
| GCAACAGCCGGCACCGGAGT+CGG | 0.552476 | 7_1:-6860490 | None:intergenic |
| AGTTATGAATATGGGCGCTA+TGG | 0.552948 | 7_1:+6861887 | Msa1007370:CDS |
| TATTATGCAGCTGAGAGACT+TGG | 0.553724 | 7_1:+6861279 | Msa1007370:intron |
| TTTGGGCGGTGCTCTTAACC+CGG | 0.553808 | 7_1:+6863151 | Msa1007370:CDS |
| GAGATGTGTTGACATTAAGC+TGG | 0.555073 | 7_1:+6862834 | Msa1007370:CDS |
| TCAACAGCAGATGCAACAGC+CGG | 0.555637 | 7_1:-6860502 | None:intergenic |
| ATGTCAACACATCTCAGGAA+TGG | 0.560252 | 7_1:-6862826 | None:intergenic |
| GTTGGAAATTGGGAGGAAAA+CGG | 0.561987 | 7_1:-6860354 | None:intergenic |
| ATCTGCTTTGGAGCAGAACA+AGG | 0.562254 | 7_1:+6862685 | Msa1007370:CDS |
| GGCGGCGGCGGAGGAAAGGG+AGG | 0.564640 | 7_1:-6860314 | None:intergenic |
| GCAGATGCAACAGCCGGCAC+CGG | 0.566723 | 7_1:-6860496 | None:intergenic |
| AACGCGGTGGAAACTTGAAA+CGG | 0.568103 | 7_1:-6860200 | None:intergenic |
| CTGCTCCAAAGCAGATTGCA+AGG | 0.570077 | 7_1:-6862678 | None:intergenic |
| GCGTCGAGGTCTAACGGCAC+CGG | 0.570156 | 7_1:-6860538 | None:intergenic |
| AACAGAATTCAACCGGAATG+AGG | 0.571836 | 7_1:+6863610 | Msa1007370:CDS |
| TACCAGTAAGACAAAATGGC+TGG | 0.573561 | 7_1:-6864537 | None:intergenic |
| CGTCGTAACTGCAGCAACAT+CGG | 0.574560 | 7_1:+6860397 | Msa1007370:CDS |
| CTTTGGTGCTGAGTTGACGT+TGG | 0.575034 | 7_1:-6860372 | None:intergenic |
| CAAATCAGCACCAAGGGCAA+GGG | 0.575071 | 7_1:-6862932 | None:intergenic |
| GTGGTTGATCCTGCTGATGT+TGG | 0.576280 | 7_1:+6862653 | Msa1007370:CDS |
| GCTCTCACAGCCACCAAATG+AGG | 0.577161 | 7_1:-6864502 | None:intergenic |
| TAGGCAGAAGTGTTCACCAC+AGG | 0.578051 | 7_1:-6861333 | None:intergenic |
| GCTGCTTCGTGGTCTAATGA+AGG | 0.578161 | 7_1:+6860436 | Msa1007370:CDS |
| AGATACACGCAGCAAATACT+GGG | 0.579391 | 7_1:-6865587 | None:intergenic |
| AAGGGAGGTGAAATCGGGAT+CGG | 0.583036 | 7_1:-6860242 | None:intergenic |
| ACATCGGCGTCGAGGTCTAA+CGG | 0.585435 | 7_1:-6860544 | None:intergenic |
| CATCTCAGGAATGGATTCGT+AGG | 0.586322 | 7_1:-6862817 | None:intergenic |
| ATTGAATCAGTGAACTGGAA+GGG | 0.588819 | 7_1:+6862038 | Msa1007370:intron |
| TGCAGCTGAGAGACTTGGTA+GGG | 0.591730 | 7_1:+6861284 | Msa1007370:intron |
| TGCTACGCCTTTGAACCAGA+AGG | 0.592523 | 7_1:+6862909 | Msa1007370:CDS |
| GAATTCAACCGGAATGAGGA+TGG | 0.593368 | 7_1:+6863614 | Msa1007370:CDS |
| CGAGCAAAGCCCCATTCTTG+TGG | 0.593385 | 7_1:-6862870 | None:intergenic |
| CATAACCAAATCAGCACCAA+GGG | 0.599807 | 7_1:-6862938 | None:intergenic |
| AGGTGAAATCGGGATCGGAA+CGG | 0.600745 | 7_1:-6860237 | None:intergenic |
| GTATTTGCTGCGTGTATCTG+CGG | 0.603788 | 7_1:+6865591 | Msa1007370:three_prime_UTR |
| ATGCAGCTGAGAGACTTGGT+AGG | 0.605179 | 7_1:+6861283 | Msa1007370:intron |
| CGTGGTCTAATGAAGGAACC+GGG | 0.605736 | 7_1:+6860443 | Msa1007370:CDS |
| TATTGAATCAGTGAACTGGA+AGG | 0.608896 | 7_1:+6862037 | Msa1007370:intron |
| TGGTGGCTGTGAGAGCATTG+TGG | 0.610822 | 7_1:+6864509 | Msa1007370:CDS |
| GGTAGGGCTATTGTGACTGA+TGG | 0.611008 | 7_1:+6861300 | Msa1007370:CDS |
| AGTAGTCACAAGATGTCCAC+CGG | 0.611288 | 7_1:-6862131 | None:intergenic |
| CTCGACGCCGATGTCGCCGA+TGG | 0.612253 | 7_1:+6860553 | Msa1007370:CDS |
| GTTTACAGAATTCAAATCAG+AGG | 0.613482 | 7_1:-6865729 | None:intergenic |
| TGCTAGCATAGTCTTGCTGA+TGG | 0.614200 | 7_1:+6862096 | Msa1007370:CDS |
| AAAACCAGTCATCTGCCTCA+TGG | 0.617037 | 7_1:-6864297 | None:intergenic |
| AAAACGAAGAATAAGAACTA+CGG | 0.621949 | 7_1:-6860609 | None:intergenic |
| AGAACTTTGCCACAAGAATG+GGG | 0.622700 | 7_1:+6862861 | Msa1007370:CDS |
| CCTTATTGAGCAGACATCCG+TGG | 0.625339 | 7_1:+6862634 | Msa1007370:intron |
| GGGATCGGAACGGCATTCGA+AGG | 0.627492 | 7_1:-6860227 | None:intergenic |
| GCAAGCAAAACGATTCATGC+CGG | 0.638119 | 7_1:+6860643 | Msa1007370:CDS |
| AGTTGACGTTGGAAATTGGG+AGG | 0.639123 | 7_1:-6860361 | None:intergenic |
| CACTCTTGTACGAAGTACAT+CGG | 0.640138 | 7_1:+6862961 | Msa1007370:CDS |
| ATTGTCATAAATCTTCCACT+TGG | 0.643061 | 7_1:-6865414 | None:intergenic |
| AGAAGTGTTCACCACAGGAG+TGG | 0.645583 | 7_1:-6861328 | None:intergenic |
| CTGCATCAGAAAGGGCCAAG+TGG | 0.649606 | 7_1:+6865399 | Msa1007370:CDS |
| TGGCGATGTTGGCGAAAATG+GGG | 0.650067 | 7_1:+6860573 | Msa1007370:CDS |
| AGACTGTTCTTCCAAAGATG+GGG | 0.658293 | 7_1:+6862188 | Msa1007370:CDS |
| CATCGGCGACATCGGCGTCG+AGG | 0.660124 | 7_1:-6860552 | None:intergenic |
| GCTGCATACCTATTCATCAG+AGG | 0.677803 | 7_1:+6863558 | Msa1007370:CDS |
| GAACCCCAGCGGAATCGCTG+GGG | 0.677985 | 7_1:+6860465 | Msa1007370:CDS |
| AGGTTGTTGGGAAATGACGA+CGG | 0.687100 | 7_1:-6860294 | None:intergenic |
| GCATAACCAAATCAGCACCA+AGG | 0.689976 | 7_1:-6862939 | None:intergenic |
| TGATGGAATTACCACTCCTG+TGG | 0.690564 | 7_1:+6861317 | Msa1007370:CDS |
| AACATCAGCAGGATCAACCA+CGG | 0.691119 | 7_1:-6862651 | None:intergenic |
| TCTTGTACGAAGTACATCGG+TGG | 0.698870 | 7_1:+6862964 | Msa1007370:CDS |
| GAAGGAACCGGGAACCCCAG+CGG | 0.706836 | 7_1:+6860454 | Msa1007370:CDS |
| CTGAACATGAGCTTGCCATG+AGG | 0.711855 | 7_1:+6864282 | Msa1007370:CDS |
| GGAAATTGGGAGGAAAACGG+AGG | 0.714797 | 7_1:-6860351 | None:intergenic |
| GGCATTCGAAGGTGAAAACG+CGG | 0.732442 | 7_1:-6860216 | None:intergenic |
| ATTCGAAGGTGAAAACGCGG+TGG | 0.746724 | 7_1:-6860213 | None:intergenic |
| TTGTTGGGAAATGACGACGG+CGG | 0.814028 | 7_1:-6860291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTATTTTTTAATTT+TGG | + | chr7_1:6861406-6861425 | Msa1007370:intron | 0.0% |
| !! | AAAAATAAAAAAAAATAAAA+AGG | - | chr7_1:6865028-6865047 | None:intergenic | 0.0% |
| !!! | TTGAAATTTTTCTTATATTA+AGG | + | chr7_1:6863451-6863470 | Msa1007370:intron | 10.0% |
| !!! | TTTTTTTTAAACAATAATCT+AGG | + | chr7_1:6865802-6865821 | Msa1007370:three_prime_UTR | 10.0% |
| !!! | TTTTTTTAAACAATAATCTA+GGG | + | chr7_1:6865803-6865822 | Msa1007370:three_prime_UTR | 10.0% |
| !! | ATAATTAAAAATTCACATAC+CGG | - | chr7_1:6860665-6860684 | None:intergenic | 15.0% |
| !!! | TAGTTTTAATTTCAAAGATT+AGG | + | chr7_1:6860797-6860816 | Msa1007370:intron | 15.0% |
| !!! | AAAGATTAGGTTAATTTTAT+TGG | + | chr7_1:6860810-6860829 | Msa1007370:intron | 15.0% |
| !!! | TAAATGAAGTTTTTGTTTTT+TGG | + | chr7_1:6860868-6860887 | Msa1007370:intron | 15.0% |
| !!! | TTTTTTGGTGAATTTTTTTT+TGG | + | chr7_1:6860883-6860902 | Msa1007370:intron | 15.0% |
| !!! | AATTTTATATGCTAAAAAGT+AGG | + | chr7_1:6860968-6860987 | Msa1007370:intron | 15.0% |
| !! | ATATATCCATTTCAAATATT+GGG | - | chr7_1:6862508-6862527 | None:intergenic | 15.0% |
| !!! | AAAAATTTCAAAAGAAGTTT+TGG | - | chr7_1:6863442-6863461 | None:intergenic | 15.0% |
| !!! | ACAATAATAGTATTGTTTTA+TGG | - | chr7_1:6863507-6863526 | None:intergenic | 15.0% |
| !!! | TCATAATAAGTGTTATTATA+AGG | + | chr7_1:6863809-6863828 | Msa1007370:intron | 15.0% |
| !!! | TATTTTAAAGACAAACAAAA+TGG | + | chr7_1:6863901-6863920 | Msa1007370:intron | 15.0% |
| !!! | CTTTTTTAATATTAACCTTT+GGG | + | chr7_1:6864034-6864053 | Msa1007370:intron | 15.0% |
| !! | TGAATCAATAAATTTAATTG+TGG | - | chr7_1:6864460-6864479 | None:intergenic | 15.0% |
| !!! | AAGATTTTATTTTATTCCAT+TGG | - | chr7_1:6864754-6864773 | None:intergenic | 15.0% |
| !! | AAAGTGGAAAAAAAAAATAA+AGG | - | chr7_1:6865236-6865255 | None:intergenic | 15.0% |
| !! | ATTTATATACTTTCAGTCAA+AGG | + | chr7_1:6861012-6861031 | Msa1007370:intron | 20.0% |
| !!! | AGGAATATAATTTTAGAAAG+TGG | + | chr7_1:6861032-6861051 | Msa1007370:intron | 20.0% |
| !!! | GGAATATAATTTTAGAAAGT+GGG | + | chr7_1:6861033-6861052 | Msa1007370:intron | 20.0% |
| !! | TGGGTATCTAATAAAAAAAT+TGG | + | chr7_1:6861052-6861071 | Msa1007370:intron | 20.0% |
| !!! | TGAATGAATTTGTTATGTAA+GGG | + | chr7_1:6861621-6861640 | Msa1007370:intron | 20.0% |
| !!! | AATTGTTTTAATTGAAAGTG+TGG | + | chr7_1:6862326-6862345 | Msa1007370:intron | 20.0% |
| !!! | ATCATACTTTGTAATTTTGT+CGG | + | chr7_1:6862474-6862493 | Msa1007370:intron | 20.0% |
| !!! | TTTTAACCCAATATTTGAAA+TGG | + | chr7_1:6862499-6862518 | Msa1007370:intron | 20.0% |
| !! | GATATATCCATTTCAAATAT+TGG | - | chr7_1:6862509-6862528 | None:intergenic | 20.0% |
| !! | TTGAAATGGATATATCTAAT+TGG | + | chr7_1:6862513-6862532 | Msa1007370:intron | 20.0% |
| !!! | TGTAAACTATTTTAAAGAAC+AGG | - | chr7_1:6863017-6863036 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | - | chr7_1:6863226-6863245 | None:intergenic | 20.0% |
| !!! | TGAGACATTTTCTTATAAAT+AGG | + | chr7_1:6863415-6863434 | Msa1007370:intron | 20.0% |
| !!! | ATTTTTCTTATATTAAGGAC+CGG | + | chr7_1:6863456-6863475 | Msa1007370:intron | 20.0% |
| !!! | TGATATTTTGTATTAGTAAC+TGG | + | chr7_1:6863680-6863699 | Msa1007370:intron | 20.0% |
| !!! | GATATTTTGTATTAGTAACT+GGG | + | chr7_1:6863681-6863700 | Msa1007370:intron | 20.0% |
| !! | ATATTAAAAAAGGAAAATGC+TGG | - | chr7_1:6864026-6864045 | None:intergenic | 20.0% |
| !! | CCAAAGGTTAATATTAAAAA+AGG | - | chr7_1:6864036-6864055 | None:intergenic | 20.0% |
| !!! | CCTTTTTTAATATTAACCTT+TGG | + | chr7_1:6864033-6864052 | Msa1007370:intron | 20.0% |
| !!! | AACTTTCAATTCTATTTCTT+AGG | - | chr7_1:6864941-6864960 | None:intergenic | 20.0% |
| !! | AAGAAATAGAATTGAAAGTT+TGG | + | chr7_1:6864941-6864960 | Msa1007370:intron | 20.0% |
| !!! | ATTGTTTTAATTACTTACCT+GGG | + | chr7_1:6865324-6865343 | Msa1007370:intron | 20.0% |
| ! | AAAACGAAGAATAAGAACTA+CGG | - | chr7_1:6860612-6860631 | None:intergenic | 25.0% |
| !! | AAATCTGAATCTTTCTCTTT+TGG | - | chr7_1:6861135-6861154 | None:intergenic | 25.0% |
| !! | AGCAGTTTTCTTAAAAAAGT+AGG | - | chr7_1:6861355-6861374 | None:intergenic | 25.0% |
| !!! | TGCTGATCTTATTGATTTTA+AGG | + | chr7_1:6861371-6861390 | Msa1007370:CDS | 25.0% |
| !!! | GTGAATGAATTTGTTATGTA+AGG | + | chr7_1:6861620-6861639 | Msa1007370:intron | 25.0% |
| ! | TTTAGAAAAACATTCATAGC+TGG | - | chr7_1:6861836-6861855 | None:intergenic | 25.0% |
| !! | TCTAAATTTTATCACATTGC+AGG | + | chr7_1:6861850-6861869 | Msa1007370:intron | 25.0% |
| ! | GTCAAACTAGTTATGAATAT+GGG | + | chr7_1:6861879-6861898 | Msa1007370:CDS | 25.0% |
| !! | TTGTAATATTTGAAATGCTG+TGG | + | chr7_1:6861988-6862007 | Msa1007370:intron | 25.0% |
| !! | TCATACTTTGTAATTTTGTC+GGG | + | chr7_1:6862475-6862494 | Msa1007370:intron | 25.0% |
| ! | AATGGATATATCTAATTGGT+TGG | + | chr7_1:6862517-6862536 | Msa1007370:intron | 25.0% |
| ! | ATGGATATATCTAATTGGTT+GGG | + | chr7_1:6862518-6862537 | Msa1007370:intron | 25.0% |
| !! | TCGAATTTTGCATCATATTT+TGG | + | chr7_1:6863133-6863152 | Msa1007370:CDS | 25.0% |
| !! | CGAATTTTGCATCATATTTT+GGG | + | chr7_1:6863134-6863153 | Msa1007370:CDS | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | - | chr7_1:6863221-6863240 | None:intergenic | 25.0% |
| ! | AAAGATACAACAATTAATGC+TGG | - | chr7_1:6863268-6863287 | None:intergenic | 25.0% |
| ! | TGTTTCACAACATTCTATAA+GGG | - | chr7_1:6863312-6863331 | None:intergenic | 25.0% |
| ! | ATGTTTCACAACATTCTATA+AGG | - | chr7_1:6863313-6863332 | None:intergenic | 25.0% |
| !! | GTCTGACTTTTTAATATTAG+TGG | - | chr7_1:6863345-6863364 | None:intergenic | 25.0% |
| ! | AAAAAGTCAGACATTAAATG+AGG | + | chr7_1:6863353-6863372 | Msa1007370:intron | 25.0% |
| ! | AAAAGTCAGACATTAAATGA+GGG | + | chr7_1:6863354-6863373 | Msa1007370:intron | 25.0% |
| ! | AAAATATCATAGTAAAGCCA+TGG | - | chr7_1:6863669-6863688 | None:intergenic | 25.0% |
| ! | GTAATAATGTGTTCTACTAT+AGG | + | chr7_1:6864084-6864103 | Msa1007370:intron | 25.0% |
| ! | ATCAGTGACATTATACAAAA+AGG | - | chr7_1:6864160-6864179 | None:intergenic | 25.0% |
| ! | ATGAAATCATGCTATCATTA+CGG | - | chr7_1:6864187-6864206 | None:intergenic | 25.0% |
| !! | TAGTATGTTGTTGTTAATCA+TGG | - | chr7_1:6864215-6864234 | None:intergenic | 25.0% |
| ! | AACAACATACTATTATTTGC+AGG | + | chr7_1:6864223-6864242 | Msa1007370:intron | 25.0% |
| !!! | TGCTATAACAAAAAGCATTA+TGG | - | chr7_1:6864377-6864396 | None:intergenic | 25.0% |
| ! | CTAAGAAAGATTTCATTACA+GGG | - | chr7_1:6864646-6864665 | None:intergenic | 25.0% |
| ! | ACTAAGAAAGATTTCATTAC+AGG | - | chr7_1:6864647-6864666 | None:intergenic | 25.0% |
| ! | GTAATGAAATCTTTCTTAGT+TGG | + | chr7_1:6864647-6864666 | Msa1007370:intron | 25.0% |
| ! | ATTTAATAGACACTTCCATT+TGG | - | chr7_1:6864821-6864840 | None:intergenic | 25.0% |
| !!! | AAATGGAAGTGTCTATTAAA+TGG | + | chr7_1:6864820-6864839 | Msa1007370:intron | 25.0% |
| !!! | GGATAGTAGAATGTTTTTTT+GGG | + | chr7_1:6864891-6864910 | Msa1007370:intron | 25.0% |
| !!! | TAGAATGTTTTTTTGGGAAT+TGG | + | chr7_1:6864897-6864916 | Msa1007370:intron | 25.0% |
| !!! | AGAATGTTTTTTTGGGAATT+GGG | + | chr7_1:6864898-6864917 | Msa1007370:intron | 25.0% |
| !!! | TAGAATTGAAAGTTTGGTTT+TGG | + | chr7_1:6864947-6864966 | Msa1007370:intron | 25.0% |
| ! | GAAGAGATATATCAAGTAAA+TGG | - | chr7_1:6865135-6865154 | None:intergenic | 25.0% |
| ! | TTAATAGAAGTGAAAGTGAA+GGG | - | chr7_1:6865162-6865181 | None:intergenic | 25.0% |
| ! | TTTAATAGAAGTGAAAGTGA+AGG | - | chr7_1:6865163-6865182 | None:intergenic | 25.0% |
| !!! | CATTGTTTTAATTACTTACC+TGG | + | chr7_1:6865323-6865342 | Msa1007370:intron | 25.0% |
| ! | AACATTAAATACAGCTACAA+AGG | - | chr7_1:6865351-6865370 | None:intergenic | 25.0% |
| ! | AATAATGAATAGTGCCTATA+TGG | - | chr7_1:6865510-6865529 | None:intergenic | 25.0% |
| ! | GAGAAAAAGATAAATGTTTG+CGG | - | chr7_1:6865535-6865554 | None:intergenic | 25.0% |
| ! | ATTAATTCCTTGAACTGATT+TGG | + | chr7_1:6865616-6865635 | Msa1007370:three_prime_UTR | 25.0% |
| !! | TTAATTCCTTGAACTGATTT+GGG | + | chr7_1:6865617-6865636 | Msa1007370:three_prime_UTR | 25.0% |
| !! | TTTTAAACAATAATCTAGGG+TGG | + | chr7_1:6865806-6865825 | Msa1007370:three_prime_UTR | 25.0% |
| ! | TTGATTATGGCTTATTTGTT+GGG | - | chr7_1:6865837-6865856 | None:intergenic | 25.0% |
| ! | TTTGATTATGGCTTATTTGT+TGG | - | chr7_1:6865838-6865857 | None:intergenic | 25.0% |
| ! | TGGTACAAAAAACTCAGTTT+TGG | - | chr7_1:6861115-6861134 | None:intergenic | 30.0% |
| !!! | TGTGTTGATTGATGAGTTTT+TGG | + | chr7_1:6861248-6861267 | Msa1007370:intron | 30.0% |
| TTCAATGTAATCACATCTGT+TGG | + | chr7_1:6861522-6861541 | Msa1007370:intron | 30.0% | |
| !! | ATTTGTTATGTAAGGGAATG+AGG | + | chr7_1:6861628-6861647 | Msa1007370:intron | 30.0% |
| ! | TTTGTTATGTAAGGGAATGA+GGG | + | chr7_1:6861629-6861648 | Msa1007370:intron | 30.0% |
| AGAATACAATCACATGTATC+AGG | - | chr7_1:6861740-6861759 | None:intergenic | 30.0% | |
| CAGATGATTTAAGAAATCTG+AGG | - | chr7_1:6861767-6861786 | None:intergenic | 30.0% | |
| CGTCAAACTAGTTATGAATA+TGG | + | chr7_1:6861878-6861897 | Msa1007370:CDS | 30.0% | |
| TCATTATTGAATCAGTGAAC+TGG | + | chr7_1:6862033-6862052 | Msa1007370:intron | 30.0% | |
| !! | GTGAATTCATTGATTTGTGT+TGG | + | chr7_1:6862221-6862240 | Msa1007370:intron | 30.0% |
| ! | TCTTCCTGGAAATTTTTATG+TGG | + | chr7_1:6862395-6862414 | Msa1007370:intron | 30.0% |
| ! | CATACTTTGTAATTTTGTCG+GGG | + | chr7_1:6862476-6862495 | Msa1007370:intron | 30.0% |
| ! | TTAGTGTTGGGAAGATTAAT+TGG | + | chr7_1:6862708-6862727 | Msa1007370:intron | 30.0% |
| TAGATACTGTAGAATTCTGA+TGG | + | chr7_1:6862752-6862771 | Msa1007370:intron | 30.0% | |
| !!! | AACCAGAAAGAAGTGTTTTT+AGG | - | chr7_1:6863063-6863082 | None:intergenic | 30.0% |
| !! | ATTTTGCATCATATTTTGGG+CGG | + | chr7_1:6863137-6863156 | Msa1007370:CDS | 30.0% |
| AGTATATCAATCAAGGAATC+GGG | - | chr7_1:6863194-6863213 | None:intergenic | 30.0% | |
| GAGTATATCAATCAAGGAAT+CGG | - | chr7_1:6863195-6863214 | None:intergenic | 30.0% | |
| !!! | GCATTGGTTTTGATGTTTTT+TGG | - | chr7_1:6863246-6863265 | None:intergenic | 30.0% |
| ! | GTTCCATATCTTGATTTTAG+CGG | + | chr7_1:6863923-6863942 | Msa1007370:intron | 30.0% |
| !! | TTCCATATCTTGATTTTAGC+GGG | + | chr7_1:6863924-6863943 | Msa1007370:intron | 30.0% |
| ! | GGAATTGCTATTCAAATTTG+TGG | + | chr7_1:6864344-6864363 | Msa1007370:intron | 30.0% |
| !! | GCTTTTTGTTATAGCATAGT+TGG | + | chr7_1:6864381-6864400 | Msa1007370:intron | 30.0% |
| GATCTCAACAATTTCAAACA+AGG | - | chr7_1:6864690-6864709 | None:intergenic | 30.0% | |
| CTATTAAATGGAGAGGATAT+TGG | + | chr7_1:6864832-6864851 | Msa1007370:intron | 30.0% | |
| AAAAGAAAGAAACAACCATG+TGG | + | chr7_1:6864869-6864888 | Msa1007370:intron | 30.0% | |
| AAAGAAAGAAACAACCATGT+GGG | + | chr7_1:6864870-6864889 | Msa1007370:intron | 30.0% | |
| !!! | GGGATAGTAGAATGTTTTTT+TGG | + | chr7_1:6864890-6864909 | Msa1007370:intron | 30.0% |
| ACAGAAAACACTTCACTAAT+TGG | + | chr7_1:6864982-6865001 | Msa1007370:intron | 30.0% | |
| AAACACTTCACTAATTGGAA+AGG | + | chr7_1:6864987-6865006 | Msa1007370:intron | 30.0% | |
| ! | ATGTTGACTAATCATAGCAA+TGG | - | chr7_1:6865078-6865097 | None:intergenic | 30.0% |
| ! | ATTGCTATGATTAGTCAACA+TGG | + | chr7_1:6865077-6865096 | Msa1007370:intron | 30.0% |
| ! | TTTTTCATGTATTCTGCAAC+AGG | + | chr7_1:6865369-6865388 | Msa1007370:intron | 30.0% |
| ! | TTTTCATGTATTCTGCAACA+GGG | + | chr7_1:6865370-6865389 | Msa1007370:intron | 30.0% |
| ATTGTCATAAATCTTCCACT+TGG | - | chr7_1:6865417-6865436 | None:intergenic | 30.0% | |
| GTGGAAGATTTATGACAATT+TGG | + | chr7_1:6865418-6865437 | Msa1007370:CDS | 30.0% | |
| !!! | CTTTGGAATTGAAGATTTTG+AGG | + | chr7_1:6865451-6865470 | Msa1007370:CDS | 30.0% |
| !! | TGAAGATTTTGAGGATTTGA+AGG | + | chr7_1:6865460-6865479 | Msa1007370:CDS | 30.0% |
| !!! | TTCTCTCTTGTTATTTTGTC+TGG | + | chr7_1:6865649-6865668 | Msa1007370:three_prime_UTR | 30.0% |
| ATGATTGCGTAATGATGTAT+TGG | + | chr7_1:6865687-6865706 | Msa1007370:three_prime_UTR | 30.0% | |
| TGATTGCGTAATGATGTATT+GGG | + | chr7_1:6865688-6865707 | Msa1007370:three_prime_UTR | 30.0% | |
| ! | TTGGGCTTGTTTAAGAAAAA+TGG | + | chr7_1:6865706-6865725 | Msa1007370:three_prime_UTR | 30.0% |
| GTTTACAGAATTCAAATCAG+AGG | - | chr7_1:6865732-6865751 | None:intergenic | 30.0% | |
| CACTTCAACATTACAATCAT+AGG | - | chr7_1:6865754-6865773 | None:intergenic | 30.0% | |
| ! | TGATTATGGCTTATTTGTTG+GGG | - | chr7_1:6865836-6865855 | None:intergenic | 30.0% |
| AAGCCATAATCAAAGATCTA+AGG | + | chr7_1:6865844-6865863 | Msa1007370:three_prime_UTR | 30.0% | |
| ! | TAGCCTTAGATCTTTGATTA+TGG | - | chr7_1:6865850-6865869 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTCGTTTTGGTG+TGG | - | chr7_1:6860177-6860196 | None:intergenic | 35.0% |
| CACCAAAACGACACAAAAAA+TGG | + | chr7_1:6860177-6860196 | Msa1007370:exon | 35.0% | |
| ! | ATGAATCGTTTTGCTTGCAT+CGG | - | chr7_1:6860641-6860660 | None:intergenic | 35.0% |
| TGCTGTGGTTGAATTTAATG+AGG | + | chr7_1:6862003-6862022 | Msa1007370:intron | 35.0% | |
| TATTGAATCAGTGAACTGGA+AGG | + | chr7_1:6862037-6862056 | Msa1007370:intron | 35.0% | |
| ATTGAATCAGTGAACTGGAA+GGG | + | chr7_1:6862038-6862057 | Msa1007370:intron | 35.0% | |
| ! | TGACTACTACTGATTGTTAC+AGG | + | chr7_1:6862146-6862165 | Msa1007370:CDS | 35.0% |
| TTGAGTTACCTATGGAAACA+CGG | - | chr7_1:6862295-6862314 | None:intergenic | 35.0% | |
| ! | ACTACTCTTTGAGTTACCTA+TGG | - | chr7_1:6862303-6862322 | None:intergenic | 35.0% |
| AGACAAGTAGGAGCTAATTA+AGG | - | chr7_1:6862378-6862397 | None:intergenic | 35.0% | |
| AAATTTCCAGGAAGACAAGT+AGG | - | chr7_1:6862390-6862409 | None:intergenic | 35.0% | |
| CTCTCCACATAAAAATTTCC+AGG | - | chr7_1:6862402-6862421 | None:intergenic | 35.0% | |
| TATATCTAATTGGTTGGGTG+TGG | + | chr7_1:6862523-6862542 | Msa1007370:intron | 35.0% | |
| !!! | ATGGTTTTGTACAAATGTGC+AGG | + | chr7_1:6862771-6862790 | Msa1007370:intron | 35.0% |
| GACCTAAAAACACTTCTTTC+TGG | + | chr7_1:6863058-6863077 | Msa1007370:intron | 35.0% | |
| !! | AAAACACTTCTTTCTGGTTC+AGG | + | chr7_1:6863064-6863083 | Msa1007370:intron | 35.0% |
| CTTGATTGATATACTCACTC+CGG | + | chr7_1:6863199-6863218 | Msa1007370:intron | 35.0% | |
| ACAACAATTAATGCTGGCAT+TGG | - | chr7_1:6863262-6863281 | None:intergenic | 35.0% | |
| TTTCTTATATTAAGGACCGG+AGG | + | chr7_1:6863459-6863478 | Msa1007370:intron | 35.0% | |
| TTCTTATATTAAGGACCGGA+GGG | + | chr7_1:6863460-6863479 | Msa1007370:intron | 35.0% | |
| TAACATGTTCACACTATGTC+AGG | - | chr7_1:6863531-6863550 | None:intergenic | 35.0% | |
| ! | TTTTCATGCCTCTGATGAAT+AGG | - | chr7_1:6863569-6863588 | None:intergenic | 35.0% |
| TTCCCGCTAAAATCAAGATA+TGG | - | chr7_1:6863929-6863948 | None:intergenic | 35.0% | |
| GGTGATAAATAGCCAATAAG+CGG | + | chr7_1:6863962-6863981 | Msa1007370:intron | 35.0% | |
| TTGCCTATAATGCAGATTGA+TGG | + | chr7_1:6864423-6864442 | Msa1007370:intron | 35.0% | |
| TCTCCATCAATCTGCATTAT+AGG | - | chr7_1:6864429-6864448 | None:intergenic | 35.0% | |
| CAAATGAGGCAGCAATATAT+GGG | - | chr7_1:6864491-6864510 | None:intergenic | 35.0% | |
| TGAGTACCAGTAAGACAAAA+TGG | - | chr7_1:6864544-6864563 | None:intergenic | 35.0% | |
| TTGTCTTACTGGTACTCATT+TGG | + | chr7_1:6864546-6864565 | Msa1007370:intron | 35.0% | |
| ACATTACTTGTCATGTGCTA+TGG | + | chr7_1:6864604-6864623 | Msa1007370:intron | 35.0% | |
| TTACAGGGTCACATTCAAAT+AGG | - | chr7_1:6864631-6864650 | None:intergenic | 35.0% | |
| CTATCTATTCTCTCTCCAAA+TGG | + | chr7_1:6864803-6864822 | Msa1007370:intron | 35.0% | |
| ! | GAAGTGTCTATTAAATGGAG+AGG | + | chr7_1:6864825-6864844 | Msa1007370:intron | 35.0% |
| AATGGAGAGGATATTGGAAT+AGG | + | chr7_1:6864838-6864857 | Msa1007370:intron | 35.0% | |
| ATGGAGAGGATATTGGAATA+GGG | + | chr7_1:6864839-6864858 | Msa1007370:intron | 35.0% | |
| AAACATTCTACTATCCCACA+TGG | - | chr7_1:6864887-6864906 | None:intergenic | 35.0% | |
| TTCTTAGGAGTTCCAAACAA+GGG | - | chr7_1:6864926-6864945 | None:intergenic | 35.0% | |
| TTTCTTAGGAGTTCCAAACA+AGG | - | chr7_1:6864927-6864946 | None:intergenic | 35.0% | |
| ! | AAGTGTTTTCTGTAGTAGGA+GGG | - | chr7_1:6864975-6864994 | None:intergenic | 35.0% |
| !! | AGTGAAGTGTTTTCTGTAGT+AGG | - | chr7_1:6864979-6864998 | None:intergenic | 35.0% |
| GATAGGATGACAAAACAAAG+TGG | - | chr7_1:6865252-6865271 | None:intergenic | 35.0% | |
| AAGAAACATGAGTCGAAGAT+AGG | - | chr7_1:6865269-6865288 | None:intergenic | 35.0% | |
| ! | AATTTGGTTCGATTCAGCTT+TGG | + | chr7_1:6865434-6865453 | Msa1007370:CDS | 35.0% |
| ! | TCATCATTTGGTTGGTGTAG+AGG | + | chr7_1:6860109-6860128 | Msa1007370:five_prime_UTR | 40.0% |
| ! | TGGTGTGGTTAGGTTTTTCT+TGG | - | chr7_1:6860162-6860181 | None:intergenic | 40.0% |
| !!! | GGCCATTTTTTGTGTCGTTT+TGG | - | chr7_1:6860182-6860201 | None:intergenic | 40.0% |
| GTTGGAAATTGGGAGGAAAA+CGG | - | chr7_1:6860357-6860376 | None:intergenic | 40.0% | |
| ! | CTGAGTTGACGTTGGAAATT+GGG | - | chr7_1:6860367-6860386 | None:intergenic | 40.0% |
| TATTATGCAGCTGAGAGACT+TGG | + | chr7_1:6861279-6861298 | Msa1007370:intron | 40.0% | |
| TACTTGTAAGCTACGAAGCA+CGG | + | chr7_1:6861444-6861463 | Msa1007370:intron | 40.0% | |
| ! | CAATCGACACTTTTGATCGA+AGG | - | chr7_1:6861583-6861602 | None:intergenic | 40.0% |
| !! | TAGCACCGACACTTTATTGA+GGG | + | chr7_1:6861680-6861699 | Msa1007370:intron | 40.0% |
| ACATGCCCTCAATAAAGTGT+CGG | - | chr7_1:6861688-6861707 | None:intergenic | 40.0% | |
| ! | TGAGGGCATGTTTGAAGTTT+CGG | + | chr7_1:6861697-6861716 | Msa1007370:intron | 40.0% |
| ACAATACCAACACTGACACA+TGG | - | chr7_1:6861793-6861812 | None:intergenic | 40.0% | |
| AGTTATGAATATGGGCGCTA+TGG | + | chr7_1:6861887-6861906 | Msa1007370:CDS | 40.0% | |
| !!! | CTGTTTTGGAGGAGAAGATA+AGG | + | chr7_1:6861924-6861943 | Msa1007370:CDS | 40.0% |
| TTGAATCAGTGAACTGGAAG+GGG | + | chr7_1:6862039-6862058 | Msa1007370:intron | 40.0% | |
| ! | TCAACTATCTTGATGGCATC+TGG | + | chr7_1:6862067-6862086 | Msa1007370:CDS | 40.0% |
| ! | CAACTATCTTGATGGCATCT+GGG | + | chr7_1:6862068-6862087 | Msa1007370:CDS | 40.0% |
| CTGATTGTTACAGGAAGACT+AGG | + | chr7_1:6862155-6862174 | Msa1007370:CDS | 40.0% | |
| AGAGACTGTTCTTCCAAAGA+TGG | + | chr7_1:6862186-6862205 | Msa1007370:CDS | 40.0% | |
| GAGACTGTTCTTCCAAAGAT+GGG | + | chr7_1:6862187-6862206 | Msa1007370:CDS | 40.0% | |
| AGACTGTTCTTCCAAAGATG+GGG | + | chr7_1:6862188-6862207 | Msa1007370:CDS | 40.0% | |
| TTATGTTCCCGTGTTTCCAT+AGG | + | chr7_1:6862284-6862303 | Msa1007370:intron | 40.0% | |
| TGAGTTACCTATGGAAACAC+GGG | - | chr7_1:6862294-6862313 | None:intergenic | 40.0% | |
| GTTATGCTTCCTTTCTGAAC+TGG | + | chr7_1:6862555-6862574 | Msa1007370:intron | 40.0% | |
| AGCAGAACAAGGTTAGTGTT+GGG | + | chr7_1:6862696-6862715 | Msa1007370:intron | 40.0% | |
| ATGTCAACACATCTCAGGAA+TGG | - | chr7_1:6862829-6862848 | None:intergenic | 40.0% | |
| GCTTAATGTCAACACATCTC+AGG | - | chr7_1:6862834-6862853 | None:intergenic | 40.0% | |
| ! | GAGATGTGTTGACATTAAGC+TGG | + | chr7_1:6862834-6862853 | Msa1007370:CDS | 40.0% |
| TCAGAACTTTGCCACAAGAA+TGG | + | chr7_1:6862859-6862878 | Msa1007370:CDS | 40.0% | |
| CAGAACTTTGCCACAAGAAT+GGG | + | chr7_1:6862860-6862879 | Msa1007370:CDS | 40.0% | |
| AGAACTTTGCCACAAGAATG+GGG | + | chr7_1:6862861-6862880 | Msa1007370:CDS | 40.0% | |
| CATAACCAAATCAGCACCAA+GGG | - | chr7_1:6862941-6862960 | None:intergenic | 40.0% | |
| CACTCTTGTACGAAGTACAT+CGG | + | chr7_1:6862961-6862980 | Msa1007370:CDS | 40.0% | |
| !! | TTCTTTCTGGTTCAGGTACT+TGG | + | chr7_1:6863071-6863090 | Msa1007370:intron | 40.0% |
| !! | TGGCTCTTTGAAGTTGATCT+CGG | + | chr7_1:6863106-6863125 | Msa1007370:CDS | 40.0% |
| GCTTGTAGTAATGACTAACC+GGG | - | chr7_1:6863172-6863191 | None:intergenic | 40.0% | |
| GGCTTGTAGTAATGACTAAC+CGG | - | chr7_1:6863173-6863192 | None:intergenic | 40.0% | |
| CGGAGTGAGTATATCAATCA+AGG | - | chr7_1:6863201-6863220 | None:intergenic | 40.0% | |
| GTACAGCAACAGAATTCAAC+CGG | + | chr7_1:6863603-6863622 | Msa1007370:CDS | 40.0% | |
| AACAGAATTCAACCGGAATG+AGG | + | chr7_1:6863610-6863629 | Msa1007370:CDS | 40.0% | |
| TAGTAAAGCCATGGTACCTT+GGG | - | chr7_1:6863660-6863679 | None:intergenic | 40.0% | |
| ATAGTAAAGCCATGGTACCT+TGG | - | chr7_1:6863661-6863680 | None:intergenic | 40.0% | |
| CTTAAGCACATCAATCCCAA+AGG | - | chr7_1:6864052-6864071 | None:intergenic | 40.0% | |
| !! | GATGTGCTTAAGCTGTTTTG+TGG | + | chr7_1:6864060-6864079 | Msa1007370:intron | 40.0% |
| CCAAATGAGGCAGCAATATA+TGG | - | chr7_1:6864492-6864511 | None:intergenic | 40.0% | |
| CCATATATTGCTGCCTCATT+TGG | + | chr7_1:6864489-6864508 | Msa1007370:CDS | 40.0% | |
| TATATTGCTGCCTCATTTGG+TGG | + | chr7_1:6864492-6864511 | Msa1007370:CDS | 40.0% | |
| !! | AACCAGCCATTTTGTCTTAC+TGG | + | chr7_1:6864535-6864554 | Msa1007370:CDS | 40.0% |
| TACCAGTAAGACAAAATGGC+TGG | - | chr7_1:6864540-6864559 | None:intergenic | 40.0% | |
| ! | AACAAGGCGTAAAAGCACAA+AGG | - | chr7_1:6864674-6864693 | None:intergenic | 40.0% |
| TTGAGATCCTCTCCATTTGA+TGG | + | chr7_1:6864702-6864721 | Msa1007370:intron | 40.0% | |
| TGAGATCCTCTCCATTTGAT+GGG | + | chr7_1:6864703-6864722 | Msa1007370:intron | 40.0% | |
| !! | AATGGAAGTGTCCCATCAAA+TGG | - | chr7_1:6864717-6864736 | None:intergenic | 40.0% |
| TTTGATGGGACACTTCCATT+TGG | + | chr7_1:6864717-6864736 | Msa1007370:intron | 40.0% | |
| TTGGTCTATCTCTCTCCAAA+TGG | - | chr7_1:6864735-6864754 | None:intergenic | 40.0% | |
| TTTGGAGAGAGATAGACCAA+TGG | + | chr7_1:6864735-6864754 | Msa1007370:intron | 40.0% | |
| !! | GAAGTGTTTTCTGTAGTAGG+AGG | - | chr7_1:6864976-6864995 | None:intergenic | 40.0% |
| AATCATAGCAATGGCATGAG+TGG | - | chr7_1:6865069-6865088 | None:intergenic | 40.0% | |
| AGATACACGCAGCAAATACT+GGG | - | chr7_1:6865590-6865609 | None:intergenic | 40.0% | |
| AGAACACCCAAATCAGTTCA+AGG | - | chr7_1:6865626-6865645 | None:intergenic | 40.0% | |
| ! | TTGGTTGGTGTAGAGGAAGT+AGG | + | chr7_1:6860116-6860135 | Msa1007370:five_prime_UTR | 45.0% |
| !!! | TGTGTCGTTTTGGTGTGGTT+AGG | - | chr7_1:6860172-6860191 | None:intergenic | 45.0% |
| AACGCGGTGGAAACTTGAAA+CGG | - | chr7_1:6860203-6860222 | None:intergenic | 45.0% | |
| AGGTTGTTGGGAAATGACGA+CGG | - | chr7_1:6860297-6860316 | None:intergenic | 45.0% | |
| AGTTGACGTTGGAAATTGGG+AGG | - | chr7_1:6860364-6860383 | None:intergenic | 45.0% | |
| ! | GCTGAGTTGACGTTGGAAAT+TGG | - | chr7_1:6860368-6860387 | None:intergenic | 45.0% |
| TCGTGGTCTAATGAAGGAAC+CGG | + | chr7_1:6860442-6860461 | Msa1007370:CDS | 45.0% | |
| ! | ATTTTCGCCAACATCGCCAT+CGG | - | chr7_1:6860572-6860591 | None:intergenic | 45.0% |
| ATGGCGATGTTGGCGAAAAT+GGG | + | chr7_1:6860572-6860591 | Msa1007370:CDS | 45.0% | |
| GCAAGCAAAACGATTCATGC+CGG | + | chr7_1:6860643-6860662 | Msa1007370:CDS | 45.0% | |
| TGATGGAATTACCACTCCTG+TGG | + | chr7_1:6861317-6861336 | Msa1007370:CDS | 45.0% | |
| CACTGACACTTGTCAGACAT+TGG | + | chr7_1:6861552-6861571 | Msa1007370:intron | 45.0% | |
| !! | GTAGCACCGACACTTTATTG+AGG | + | chr7_1:6861679-6861698 | Msa1007370:intron | 45.0% |
| ! | CAACCCAACCAGTACTGTTT+TGG | + | chr7_1:6861910-6861929 | Msa1007370:CDS | 45.0% |
| !! | CCTCCAAAACAGTACTGGTT+GGG | - | chr7_1:6861916-6861935 | None:intergenic | 45.0% |
| !! | TCCTCCAAAACAGTACTGGT+TGG | - | chr7_1:6861917-6861936 | None:intergenic | 45.0% |
| CTTCTCCTCCAAAACAGTAC+TGG | - | chr7_1:6861921-6861940 | None:intergenic | 45.0% | |
| GGCTGAGTCAACTATCTTGA+TGG | + | chr7_1:6862060-6862079 | Msa1007370:CDS | 45.0% | |
| ! | TGCTAGCATAGTCTTGCTGA+TGG | + | chr7_1:6862096-6862115 | Msa1007370:CDS | 45.0% |
| AGTAGTCACAAGATGTCCAC+CGG | - | chr7_1:6862134-6862153 | None:intergenic | 45.0% | |
| TCTTCCAAAGATGGGGATCA+AGG | + | chr7_1:6862195-6862214 | Msa1007370:CDS | 45.0% | |
| CATACCTTGATCCCCATCTT+TGG | - | chr7_1:6862202-6862221 | None:intergenic | 45.0% | |
| TTAGCTCCTACTTGTCTTCC+TGG | + | chr7_1:6862381-6862400 | Msa1007370:intron | 45.0% | |
| ATCTAATTGGTTGGGTGTGG+TGG | + | chr7_1:6862526-6862545 | Msa1007370:intron | 45.0% | |
| AACATCAGCAGGATCAACCA+CGG | - | chr7_1:6862654-6862673 | None:intergenic | 45.0% | |
| !! | ATCTGCTTTGGAGCAGAACA+AGG | + | chr7_1:6862685-6862704 | Msa1007370:CDS | 45.0% |
| GAGCAGAACAAGGTTAGTGT+TGG | + | chr7_1:6862695-6862714 | Msa1007370:intron | 45.0% | |
| ! | CATCTCAGGAATGGATTCGT+AGG | - | chr7_1:6862820-6862839 | None:intergenic | 45.0% |
| GCATAACCAAATCAGCACCA+AGG | - | chr7_1:6862942-6862961 | None:intergenic | 45.0% | |
| TCTTGTACGAAGTACATCGG+TGG | + | chr7_1:6862964-6862983 | Msa1007370:CDS | 45.0% | |
| !! | TTTCTGGTTCAGGTACTTGG+TGG | + | chr7_1:6863074-6863093 | Msa1007370:intron | 45.0% |
| CATTTGCAACATACTCCCTC+CGG | - | chr7_1:6863478-6863497 | None:intergenic | 45.0% | |
| GCTGCATACCTATTCATCAG+AGG | + | chr7_1:6863558-6863577 | Msa1007370:CDS | 45.0% | |
| GAATTCAACCGGAATGAGGA+TGG | + | chr7_1:6863614-6863633 | Msa1007370:CDS | 45.0% | |
| AAGTTTGGCCATCCTCATTC+CGG | - | chr7_1:6863625-6863644 | None:intergenic | 45.0% | |
| ! | GAGGATGGCCAAACTTTTAG+AGG | + | chr7_1:6863629-6863648 | Msa1007370:CDS | 45.0% |
| ! | GGGATGTGCCTCTAAAAGTT+TGG | - | chr7_1:6863640-6863659 | None:intergenic | 45.0% |
| !! | ACTTTTAGAGGCACATCCCA+AGG | + | chr7_1:6863641-6863660 | Msa1007370:CDS | 45.0% |
| ! | AGCGGGAAACAAAAGTGCAA+AGG | + | chr7_1:6863941-6863960 | Msa1007370:intron | 45.0% |
| GGATCACAGATACCGCTTAT+TGG | - | chr7_1:6863977-6863996 | None:intergenic | 45.0% | |
| GCGAGAGTTTCTATCCTGAA+TGG | - | chr7_1:6863998-6864017 | None:intergenic | 45.0% | |
| AGCTCATGTTCAGGATGACT+TGG | - | chr7_1:6864275-6864294 | None:intergenic | 45.0% | |
| AAAACCAGTCATCTGCCTCA+TGG | - | chr7_1:6864300-6864319 | None:intergenic | 45.0% | |
| !!! | ATGAGGCAGATGACTGGTTT+TGG | + | chr7_1:6864299-6864318 | Msa1007370:CDS | 45.0% |
| !!! | TGAGGCAGATGACTGGTTTT+GGG | + | chr7_1:6864300-6864319 | Msa1007370:CDS | 45.0% |
| AAGTGTCCCATCAAATGGAG+AGG | - | chr7_1:6864712-6864731 | None:intergenic | 45.0% | |
| AATACAGCTACAAAGGACCC+AGG | - | chr7_1:6865344-6865363 | None:intergenic | 45.0% | |
| TTTGAAGGCTGATGTCTTGC+AGG | + | chr7_1:6865475-6865494 | Msa1007370:CDS | 45.0% | |
| CAGATACACGCAGCAAATAC+TGG | - | chr7_1:6865591-6865610 | None:intergenic | 45.0% | |
| ! | GTATTTGCTGCGTGTATCTG+CGG | + | chr7_1:6865591-6865610 | Msa1007370:three_prime_UTR | 45.0% |
| !! | AATAATTCAAATAAAAAAAA+AGG | - | chr7_1:6864115-6864134 | None:intergenic | 5.0% |
| !! | TATTGTTTAAAAAAAAAAAT+TGG | - | chr7_1:6865798-6865817 | None:intergenic | 5.0% |
| GGTGTAGAGGAAGTAGGTGT+AGG | + | chr7_1:6860122-6860141 | Msa1007370:five_prime_UTR | 50.0% | |
| ATTCGAAGGTGAAAACGCGG+TGG | - | chr7_1:6860216-6860235 | None:intergenic | 50.0% | |
| GGCATTCGAAGGTGAAAACG+CGG | - | chr7_1:6860219-6860238 | None:intergenic | 50.0% | |
| AGGTGAAATCGGGATCGGAA+CGG | - | chr7_1:6860240-6860259 | None:intergenic | 50.0% | |
| AAGGGAGGTGAAATCGGGAT+CGG | - | chr7_1:6860245-6860264 | None:intergenic | 50.0% | |
| GATGGAAGGGAGGTGAAATC+GGG | - | chr7_1:6860250-6860269 | None:intergenic | 50.0% | |
| GGATGGAAGGGAGGTGAAAT+CGG | - | chr7_1:6860251-6860270 | None:intergenic | 50.0% | |
| TTGTTGGGAAATGACGACGG+CGG | - | chr7_1:6860294-6860313 | None:intergenic | 50.0% | |
| TGGGAGGAAAACGGAGGATT+GGG | - | chr7_1:6860348-6860367 | None:intergenic | 50.0% | |
| TTGGGAGGAAAACGGAGGAT+TGG | - | chr7_1:6860349-6860368 | None:intergenic | 50.0% | |
| GGAAATTGGGAGGAAAACGG+AGG | - | chr7_1:6860354-6860373 | None:intergenic | 50.0% | |
| !! | CTTTGGTGCTGAGTTGACGT+TGG | - | chr7_1:6860375-6860394 | None:intergenic | 50.0% |
| CGTCGTAACTGCAGCAACAT+CGG | + | chr7_1:6860397-6860416 | Msa1007370:CDS | 50.0% | |
| GCTGCTTCGTGGTCTAATGA+AGG | + | chr7_1:6860436-6860455 | Msa1007370:CDS | 50.0% | |
| CGTGGTCTAATGAAGGAACC+GGG | + | chr7_1:6860443-6860462 | Msa1007370:CDS | 50.0% | |
| TCAACAGCAGATGCAACAGC+CGG | - | chr7_1:6860505-6860524 | None:intergenic | 50.0% | |
| GATGGCGATGTTGGCGAAAA+TGG | + | chr7_1:6860571-6860590 | Msa1007370:CDS | 50.0% | |
| TGGCGATGTTGGCGAAAATG+GGG | + | chr7_1:6860573-6860592 | Msa1007370:CDS | 50.0% | |
| ! | ATGCAGCTGAGAGACTTGGT+AGG | + | chr7_1:6861283-6861302 | Msa1007370:intron | 50.0% |
| ! | TGCAGCTGAGAGACTTGGTA+GGG | + | chr7_1:6861284-6861303 | Msa1007370:intron | 50.0% |
| GGTAGGGCTATTGTGACTGA+TGG | + | chr7_1:6861300-6861319 | Msa1007370:CDS | 50.0% | |
| !! | AGAAGTGTTCACCACAGGAG+TGG | - | chr7_1:6861331-6861350 | None:intergenic | 50.0% |
| !! | TAGGCAGAAGTGTTCACCAC+AGG | - | chr7_1:6861336-6861355 | None:intergenic | 50.0% |
| TAAGCTACGAAGCACGGACA+CGG | + | chr7_1:6861450-6861469 | Msa1007370:intron | 50.0% | |
| CTGTGTCCATGTGTCAGTGT+TGG | + | chr7_1:6861784-6861803 | Msa1007370:intron | 50.0% | |
| !! | CCCAACCAGTACTGTTTTGG+AGG | + | chr7_1:6861913-6861932 | Msa1007370:CDS | 50.0% |
| CTGCAAGTGCCAGTTCAGAA+AGG | - | chr7_1:6862567-6862586 | None:intergenic | 50.0% | |
| CCACGGATGTCTGCTCAATA+AGG | - | chr7_1:6862637-6862656 | None:intergenic | 50.0% | |
| CCTTATTGAGCAGACATCCG+TGG | + | chr7_1:6862634-6862653 | Msa1007370:intron | 50.0% | |
| GTGGTTGATCCTGCTGATGT+TGG | + | chr7_1:6862653-6862672 | Msa1007370:CDS | 50.0% | |
| TGGAGCCTTGCAATCTGCTT+TGG | + | chr7_1:6862673-6862692 | Msa1007370:CDS | 50.0% | |
| CTGCTCCAAAGCAGATTGCA+AGG | - | chr7_1:6862681-6862700 | None:intergenic | 50.0% | |
| TGCTACGCCTTTGAACCAGA+AGG | + | chr7_1:6862909-6862928 | Msa1007370:CDS | 50.0% | |
| CAAATCAGCACCAAGGGCAA+GGG | - | chr7_1:6862935-6862954 | None:intergenic | 50.0% | |
| ! | GTACTTGGTGGTTGCATCAG+TGG | + | chr7_1:6863086-6863105 | Msa1007370:CDS | 50.0% |
| GCGGTATCTGTGATCCATTC+AGG | + | chr7_1:6863981-6864000 | Msa1007370:intron | 50.0% | |
| GTGAAGCGTGTCTACTATCC+AGG | + | chr7_1:6864245-6864264 | Msa1007370:CDS | 50.0% | |
| CTCATGGCAAGCTCATGTTC+AGG | - | chr7_1:6864284-6864303 | None:intergenic | 50.0% | |
| CTGAACATGAGCTTGCCATG+AGG | + | chr7_1:6864282-6864301 | Msa1007370:CDS | 50.0% | |
| !!! | GAGGCAGATGACTGGTTTTG+GGG | + | chr7_1:6864301-6864320 | Msa1007370:CDS | 50.0% |
| !!! | AGGCAGATGACTGGTTTTGG+GGG | + | chr7_1:6864302-6864321 | Msa1007370:CDS | 50.0% |
| !!! | GGTGTGGTCAGTTTTGAGGT+GGG | + | chr7_1:6864323-6864342 | Msa1007370:intron | 50.0% |
| GGGAATTGGGTTCCCTTGTT+TGG | + | chr7_1:6864911-6864930 | Msa1007370:intron | 50.0% | |
| GGACCTTCCTGCATCAGAAA+GGG | + | chr7_1:6865391-6865410 | Msa1007370:CDS | 50.0% | |
| GTGGTTGTCGGTGGATGGAA+GGG | - | chr7_1:6860263-6860282 | None:intergenic | 55.0% | |
| CGGAGGAAAGGGAGGTTGTT+GGG | - | chr7_1:6860309-6860328 | None:intergenic | 55.0% | |
| AGGAAAACGGAGGATTGGGG+AGG | - | chr7_1:6860344-6860363 | None:intergenic | 55.0% | |
| GGGAGGAAAACGGAGGATTG+GGG | - | chr7_1:6860347-6860366 | None:intergenic | 55.0% | |
| CACAAATCGTCGCTGCTTCG+TGG | + | chr7_1:6860425-6860444 | Msa1007370:CDS | 55.0% | |
| TGTTGATGCAACCACTGCGC+CGG | + | chr7_1:6860519-6860538 | Msa1007370:CDS | 55.0% | |
| ! | ACATCGGCGTCGAGGTCTAA+CGG | - | chr7_1:6860547-6860566 | None:intergenic | 55.0% |
| AACATCGCCATCGGCGACAT+CGG | - | chr7_1:6860563-6860582 | None:intergenic | 55.0% | |
| ! | CATAGTCTTGCTGATGGCGC+TGG | + | chr7_1:6862102-6862121 | Msa1007370:CDS | 55.0% |
| TGCAAGGCTCCAACATCAGC+AGG | - | chr7_1:6862665-6862684 | None:intergenic | 55.0% | |
| CGAGCAAAGCCCCATTCTTG+TGG | - | chr7_1:6862873-6862892 | None:intergenic | 55.0% | |
| GGGGCTTTGCTCGTCATTGA+TGG | + | chr7_1:6862880-6862899 | Msa1007370:CDS | 55.0% | |
| !! | GCAAGGGCCTTCTGGTTCAA+AGG | - | chr7_1:6862919-6862938 | None:intergenic | 55.0% |
| CCAAATCAGCACCAAGGGCA+AGG | - | chr7_1:6862936-6862955 | None:intergenic | 55.0% | |
| !! | CCTTGCCCTTGGTGCTGATT+TGG | + | chr7_1:6862933-6862952 | Msa1007370:CDS | 55.0% |
| TTTGGGCGGTGCTCTTAACC+CGG | + | chr7_1:6863151-6863170 | Msa1007370:CDS | 55.0% | |
| ! | AGGCACATCCCAAGGTACCA+TGG | + | chr7_1:6863649-6863668 | Msa1007370:intron | 55.0% |
| ! | TCAGGATGACTTGGCAAGCC+TGG | - | chr7_1:6864266-6864285 | None:intergenic | 55.0% |
| CTTGCCATGAGGCAGATGAC+TGG | + | chr7_1:6864293-6864312 | Msa1007370:CDS | 55.0% | |
| !!! | GATGACTGGTTTTGGGGGTG+TGG | + | chr7_1:6864307-6864326 | Msa1007370:CDS | 55.0% |
| !! | TGGGGGTGTGGTCAGTTTTG+AGG | + | chr7_1:6864319-6864338 | Msa1007370:CDS | 55.0% |
| !!! | GGGTGTGGTCAGTTTTGAGG+TGG | + | chr7_1:6864322-6864341 | Msa1007370:intron | 55.0% |
| GCTCTCACAGCCACCAAATG+AGG | - | chr7_1:6864505-6864524 | None:intergenic | 55.0% | |
| !! | TGGTGGCTGTGAGAGCATTG+TGG | + | chr7_1:6864509-6864528 | Msa1007370:CDS | 55.0% |
| GGGACCTTCCTGCATCAGAA+AGG | + | chr7_1:6865390-6865409 | Msa1007370:intron | 55.0% | |
| TGGCCCTTTCTGATGCAGGA+AGG | - | chr7_1:6865397-6865416 | None:intergenic | 55.0% | |
| CACTTGGCCCTTTCTGATGC+AGG | - | chr7_1:6865401-6865420 | None:intergenic | 55.0% | |
| CTGCATCAGAAAGGGCCAAG+TGG | + | chr7_1:6865399-6865418 | Msa1007370:CDS | 55.0% | |
| !! | GCAGGCACTGGAAGCCATAT+AGG | + | chr7_1:6865493-6865512 | Msa1007370:CDS | 55.0% |
| GGGATCGGAACGGCATTCGA+AGG | - | chr7_1:6860230-6860249 | None:intergenic | 60.0% | |
| GTTGTCGGTGGATGGAAGGG+AGG | - | chr7_1:6860260-6860279 | None:intergenic | 60.0% | |
| GGTGGTTGTCGGTGGATGGA+AGG | - | chr7_1:6860264-6860283 | None:intergenic | 60.0% | |
| !! | TGGTGGTGGTTGTCGGTGGA+TGG | - | chr7_1:6860268-6860287 | None:intergenic | 60.0% |
| !! | GTTGTGGTGGTGGTTGTCGG+TGG | - | chr7_1:6860272-6860291 | None:intergenic | 60.0% |
| !! | GCGGTTGTGGTGGTGGTTGT+CGG | - | chr7_1:6860275-6860294 | None:intergenic | 60.0% |
| AATGACGACGGCGGTTGTGG+TGG | - | chr7_1:6860285-6860304 | None:intergenic | 60.0% | |
| GGAAATGACGACGGCGGTTG+TGG | - | chr7_1:6860288-6860307 | None:intergenic | 60.0% | |
| GCGGAGGAAAGGGAGGTTGT+TGG | - | chr7_1:6860310-6860329 | None:intergenic | 60.0% | |
| GAGGATTGGGGAGGAGATGG+CGG | - | chr7_1:6860335-6860354 | None:intergenic | 60.0% | |
| ACGGAGGATTGGGGAGGAGA+TGG | - | chr7_1:6860338-6860357 | None:intergenic | 60.0% | |
| GCTGCAGTTACGACGCGCTT+TGG | - | chr7_1:6860392-6860411 | None:intergenic | 60.0% | |
| AATCGCTGGGGTTCCGACTC+CGG | + | chr7_1:6860477-6860496 | Msa1007370:CDS | 60.0% | |
| GATGTCGCCGATGGCGATGT+TGG | + | chr7_1:6860562-6860581 | Msa1007370:CDS | 60.0% | |
| GTCACAAGATGTCCACCGGC+TGG | - | chr7_1:6862130-6862149 | None:intergenic | 60.0% | |
| AACCAGAAGGCCCTTGCCCT+TGG | + | chr7_1:6862922-6862941 | Msa1007370:CDS | 60.0% | |
| GGCTGATGTCTTGCAGGCAC+TGG | + | chr7_1:6865481-6865500 | Msa1007370:CDS | 60.0% | |
| ! | GATTGGGGAGGAGATGGCGG+CGG | - | chr7_1:6860332-6860351 | None:intergenic | 65.0% |
| GAAGGAACCGGGAACCCCAG+CGG | + | chr7_1:6860454-6860473 | Msa1007370:CDS | 65.0% | |
| AGCGATTCCGCTGGGGTTCC+CGG | - | chr7_1:6860464-6860483 | None:intergenic | 65.0% | |
| GGAACCCCAGCGGAATCGCT+GGG | + | chr7_1:6860464-6860483 | Msa1007370:CDS | 65.0% | |
| GAACCCCAGCGGAATCGCTG+GGG | + | chr7_1:6860465-6860484 | Msa1007370:CDS | 65.0% | |
| GAACCCCAGCGATTCCGCTG+GGG | - | chr7_1:6860471-6860490 | None:intergenic | 65.0% | |
| GGAACCCCAGCGATTCCGCT+GGG | - | chr7_1:6860472-6860491 | None:intergenic | 65.0% | |
| GCAGATGCAACAGCCGGCAC+CGG | - | chr7_1:6860499-6860518 | None:intergenic | 65.0% | |
| GCGTCGAGGTCTAACGGCAC+CGG | - | chr7_1:6860541-6860560 | None:intergenic | 65.0% | |
| !! | CTGATGGCGCTGGTTCCAGC+CGG | + | chr7_1:6862112-6862131 | Msa1007370:CDS | 65.0% |
| CACCAAGGGCAAGGGCCTTC+TGG | - | chr7_1:6862927-6862946 | None:intergenic | 65.0% | |
| GACGACGGCGGTTGTGGTGG+TGG | - | chr7_1:6860282-6860301 | None:intergenic | 70.0% | |
| ! | GATGGCGGCGGCGGAGGAAA+GGG | - | chr7_1:6860320-6860339 | None:intergenic | 70.0% |
| ! | AGATGGCGGCGGCGGAGGAA+AGG | - | chr7_1:6860321-6860340 | None:intergenic | 70.0% |
| GGGAACCCCAGCGGAATCGC+TGG | + | chr7_1:6860463-6860482 | Msa1007370:CDS | 70.0% | |
| CGGAACCCCAGCGATTCCGC+TGG | - | chr7_1:6860473-6860492 | None:intergenic | 70.0% | |
| TGGGGTTCCGACTCCGGTGC+CGG | + | chr7_1:6860483-6860502 | Msa1007370:CDS | 70.0% | |
| ! | GCAACAGCCGGCACCGGAGT+CGG | - | chr7_1:6860493-6860512 | None:intergenic | 70.0% |
| !! | GTCTAACGGCACCGGCGCAG+TGG | - | chr7_1:6860533-6860552 | None:intergenic | 70.0% |
| CATCGGCGACATCGGCGTCG+AGG | - | chr7_1:6860555-6860574 | None:intergenic | 70.0% | |
| CTCGACGCCGATGTCGCCGA+TGG | + | chr7_1:6860553-6860572 | Msa1007370:CDS | 70.0% | |
| !! | ATGGCGCTGGTTCCAGCCGG+TGG | + | chr7_1:6862115-6862134 | Msa1007370:CDS | 70.0% |
| ! | TGGGGAGGAGATGGCGGCGG+CGG | - | chr7_1:6860329-6860348 | None:intergenic | 75.0% |
| ! | GGCGGCGGCGGAGGAAAGGG+AGG | - | chr7_1:6860317-6860336 | None:intergenic | 80.0% |
| !! | GGAGGAGATGGCGGCGGCGG+AGG | - | chr7_1:6860326-6860345 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 6860102 | 6865913 | 6860102 | ID=Msa1007370;Name=Msa1007370 |
| chr7_1 | mRNA | 6860102 | 6865913 | 6860102 | ID=Msa1007370-mRNA-1;Parent=Msa1007370;Name=Msa1007370-mRNA-1;_AED=0.05;_eAED=0.05;_QI=94|1|1|1|1|1|11|399|537 |
| chr7_1 | exon | 6860102 | 6860664 | 6860102 | ID=Msa1007370-mRNA-1:exon:2017;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6861289 | 6861392 | 6861289 | ID=Msa1007370-mRNA-1:exon:2018;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6861872 | 6861945 | 6861872 | ID=Msa1007370-mRNA-1:exon:2019;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6862048 | 6862216 | 6862048 | ID=Msa1007370-mRNA-1:exon:2020;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6862647 | 6862706 | 6862647 | ID=Msa1007370-mRNA-1:exon:2021;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6862793 | 6862996 | 6862793 | ID=Msa1007370-mRNA-1:exon:2022;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6863086 | 6863172 | 6863086 | ID=Msa1007370-mRNA-1:exon:2023;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6863555 | 6863662 | 6863555 | ID=Msa1007370-mRNA-1:exon:2024;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6864245 | 6864340 | 6864245 | ID=Msa1007370-mRNA-1:exon:2025;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6864438 | 6864556 | 6864438 | ID=Msa1007370-mRNA-1:exon:2026;Parent=Msa1007370-mRNA-1 |
| chr7_1 | exon | 6865391 | 6865913 | 6865391 | ID=Msa1007370-mRNA-1:exon:2027;Parent=Msa1007370-mRNA-1 |
| chr7_1 | five_prime_UTR | 6860102 | 6860195 | 6860102 | ID=Msa1007370-mRNA-1:five_prime_utr;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6860196 | 6860664 | 6860196 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6861289 | 6861392 | 6861289 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6861872 | 6861945 | 6861872 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6862048 | 6862216 | 6862048 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6862647 | 6862706 | 6862647 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6862793 | 6862996 | 6862793 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6863086 | 6863172 | 6863086 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6863555 | 6863662 | 6863555 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6864245 | 6864340 | 6864245 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6864438 | 6864556 | 6864438 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | CDS | 6865391 | 6865514 | 6865391 | ID=Msa1007370-mRNA-1:cds;Parent=Msa1007370-mRNA-1 |
| chr7_1 | three_prime_UTR | 6865515 | 6865913 | 6865515 | ID=Msa1007370-mRNA-1:three_prime_utr;Parent=Msa1007370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
