Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105200 | XP_024630645.1 | 85.366 | 41 | 6 | 0 | 90 | 130 | 100 | 140 | 1.21e-13 | 77.4 |
| Msa1105200 | XP_024630645.1 | 89.362 | 94 | 6 | 1 | 1 | 90 | 103 | 196 | 8.65e-50 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105200 | sp|Q9AXE3|DCAM_DAUCA | 61.290 | 93 | 32 | 1 | 2 | 90 | 104 | 196 | 6.80e-33 | 121 |
| Msa1105200 | sp|Q9AXE3|DCAM_DAUCA | 71.795 | 39 | 11 | 0 | 90 | 128 | 100 | 138 | 5.13e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105200 | A0A396IAX3 | 85.366 | 41 | 6 | 0 | 90 | 130 | 100 | 140 | 5.78e-14 | 77.4 |
| Msa1105200 | A0A396IAX3 | 89.362 | 94 | 6 | 1 | 1 | 90 | 103 | 196 | 4.13e-50 | 172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0366560 | Msa1105200 | 0.814768 | 1.301842e-51 | -8.615850e-47 |
| Msa0506110 | Msa1105200 | 0.817648 | 2.956838e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105200 | MtrunA17_Chr4g0020181 | 89.362 | 94 | 6 | 1 | 1 | 90 | 103 | 196 | 7.95e-54 | 172 |
| Msa1105200 | MtrunA17_Chr4g0020181 | 85.366 | 41 | 6 | 0 | 90 | 130 | 100 | 140 | 1.11e-17 | 77.4 |
| Msa1105200 | MtrunA17_Chr7g0220781 | 88.298 | 94 | 7 | 1 | 1 | 90 | 103 | 196 | 2.74e-52 | 168 |
| Msa1105200 | MtrunA17_Chr7g0220781 | 85.366 | 41 | 6 | 0 | 90 | 130 | 100 | 140 | 3.03e-17 | 76.3 |
| Msa1105200 | MtrunA17_Chr7g0220841 | 86.170 | 94 | 9 | 1 | 1 | 90 | 103 | 196 | 3.08e-51 | 166 |
| Msa1105200 | MtrunA17_Chr7g0220841 | 82.927 | 41 | 7 | 0 | 90 | 130 | 100 | 140 | 1.04e-16 | 74.7 |
| Msa1105200 | MtrunA17_Chr7g0220811 | 88.372 | 86 | 6 | 1 | 2 | 83 | 104 | 189 | 1.54e-49 | 156 |
| Msa1105200 | MtrunA17_Chr7g0220811 | 84.615 | 39 | 6 | 0 | 90 | 128 | 100 | 138 | 1.35e-16 | 72.4 |
| Msa1105200 | MtrunA17_Chr4g0021521 | 63.441 | 93 | 30 | 1 | 2 | 90 | 102 | 194 | 2.49e-35 | 124 |
| Msa1105200 | MtrunA17_Chr4g0021521 | 69.231 | 39 | 12 | 0 | 90 | 128 | 98 | 136 | 1.68e-12 | 62.8 |
| Msa1105200 | MtrunA17_Chr8g0368661 | 60.638 | 94 | 33 | 1 | 1 | 90 | 103 | 196 | 1.43e-32 | 117 |
| Msa1105200 | MtrunA17_Chr8g0368661 | 61.364 | 44 | 17 | 0 | 90 | 133 | 100 | 143 | 7.79e-12 | 61.2 |
| Msa1105200 | MtrunA17_Chr2g0286961 | 40.909 | 88 | 47 | 3 | 2 | 84 | 102 | 189 | 1.52e-14 | 68.6 |
| Msa1105200 | MtrunA17_Chr4g0066361 | 33.696 | 92 | 50 | 3 | 4 | 84 | 100 | 191 | 1.81e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105200 | AT3G25570.2 | 59.375 | 96 | 32 | 3 | 2 | 90 | 102 | 197 | 1.43e-29 | 109 |
| Msa1105200 | AT3G25570.2 | 76.923 | 39 | 9 | 0 | 90 | 128 | 98 | 136 | 7.47e-14 | 67.0 |
| Msa1105200 | AT3G25570.1 | 59.375 | 96 | 32 | 3 | 2 | 90 | 102 | 197 | 1.43e-29 | 109 |
| Msa1105200 | AT3G25570.1 | 76.923 | 39 | 9 | 0 | 90 | 128 | 98 | 136 | 7.47e-14 | 67.0 |
| Msa1105200 | AT3G02470.4 | 53.191 | 94 | 39 | 2 | 2 | 90 | 102 | 195 | 3.75e-27 | 103 |
| Msa1105200 | AT3G02470.1 | 53.191 | 94 | 39 | 2 | 2 | 90 | 102 | 195 | 3.75e-27 | 103 |
| Msa1105200 | AT3G02470.3 | 53.191 | 94 | 39 | 2 | 2 | 90 | 102 | 195 | 3.75e-27 | 103 |
| Msa1105200 | AT5G15950.2 | 54.839 | 93 | 38 | 1 | 2 | 90 | 102 | 194 | 8.79e-27 | 102 |
| Msa1105200 | AT5G15950.1 | 54.839 | 93 | 38 | 1 | 2 | 90 | 102 | 194 | 8.79e-27 | 102 |
| Msa1105200 | AT5G18930.1 | 39.785 | 93 | 50 | 2 | 1 | 88 | 99 | 190 | 5.94e-15 | 70.1 |
Find 24 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGGAAGCTTCATCTTTCC+TGG | 0.256495 | 7_3:-43395838 | Msa1105200:CDS |
| CGCGGAAGCTTCATCTTTCC+TGG | 0.256495 | 7_3:-43400962 | Msa1105200:CDS |
| GATGTTCTTGACAGCTATTT+TGG | 0.271300 | 7_3:-43400900 | Msa1105200:intron |
| GCTGTTCTTGACAGCTATTT+TGG | 0.280170 | 7_3:-43395776 | Msa1105200:CDS |
| ATGCTGATAAGTCACAAATT+TGG | 0.357352 | 7_3:-43400839 | Msa1105200:CDS |
| TCAAGGCCATAGACAGCTTC+CGG | 0.398954 | 7_3:+43400780 | None:intergenic |
| GCTTCACCGGAAGCTGTCTA+TGG | 0.409050 | 7_3:-43400786 | Msa1105200:CDS |
| AACTAGTCATGCACATTTCA+AGG | 0.413414 | 7_3:+43400763 | None:intergenic |
| TGAGGAAAGGATTGAGCTCC+AGG | 0.451159 | 7_3:+43395820 | None:intergenic |
| TGAGGAAAGGATTGAGCTCC+AGG | 0.451159 | 7_3:+43400944 | None:intergenic |
| TCTCAACATTGCTGTGAAAT+CGG | 0.508214 | 7_3:-43395872 | Msa1105200:CDS |
| TCTCAACATTGCTGTGAAAT+CGG | 0.508214 | 7_3:-43400996 | Msa1105200:CDS |
| GACTAGTTTAGATAAAGAAA+AGG | 0.528480 | 7_3:-43400748 | Msa1105200:CDS |
| CATCGCCCATCATGTAAGCT+TGG | 0.532377 | 7_3:+43400859 | None:intergenic |
| TTGTAGCCAAGCTTACATGA+TGG | 0.552991 | 7_3:-43400865 | Msa1105200:CDS |
| TGTAGCCAAGCTTACATGAT+GGG | 0.553882 | 7_3:-43400864 | Msa1105200:CDS |
| TGCTAAGCTAGAAGCTTCAC+CGG | 0.553986 | 7_3:-43400799 | Msa1105200:CDS |
| AGAAAAGCTTCGATGAGGAA+AGG | 0.581169 | 7_3:+43395807 | None:intergenic |
| AGAAAAGCTTCGATGAGGAA+AGG | 0.581169 | 7_3:+43400931 | None:intergenic |
| GCAATTCTTAAGCTTGCAGA+TGG | 0.591629 | 7_3:-43395895 | Msa1105200:intron |
| TTCTCAGAAAAGCTTCGATG+AGG | 0.638495 | 7_3:+43395802 | None:intergenic |
| TTCTCAGAAAAGCTTCGATG+AGG | 0.638495 | 7_3:+43400926 | None:intergenic |
| AAATCGGTGAGATACACTCG+CGG | 0.764779 | 7_3:-43395856 | Msa1105200:CDS |
| AAATCGGTGAGATACACTCG+CGG | 0.764779 | 7_3:-43400980 | Msa1105200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATAATTAAATAAAA+AGG | + | chr7_3:43396809-43396828 | None:intergenic | 0.0% |
| !! | AAATAATTAAATAAAAAGGA+GGG | + | chr7_3:43396805-43396824 | None:intergenic | 10.0% |
| !! | AAAATAATTAAATAAAAAGG+AGG | + | chr7_3:43396806-43396825 | None:intergenic | 10.0% |
| !! | TTAGAATATATTTATATGAT+TGG | - | chr7_3:43396834-43396853 | Msa1105200:intron | 10.0% |
| !! | ATAATATCTAAATATTAACA+AGG | + | chr7_3:43397929-43397948 | None:intergenic | 10.0% |
| !! | ATTTAAAAGAATCTTAATTT+GGG | + | chr7_3:43398000-43398019 | None:intergenic | 10.0% |
| !! | TATTTAAAAGAATCTTAATT+TGG | + | chr7_3:43398001-43398020 | None:intergenic | 10.0% |
| !! | TAATACTATAATATTAATAG+AGG | - | chr7_3:43398656-43398675 | Msa1105200:intron | 10.0% |
| !!! | AATATATTTGTTATTTTGTG+TGG | - | chr7_3:43396863-43396882 | Msa1105200:intron | 15.0% |
| !! | TAAAATATCATGAAAAACAA+TGG | + | chr7_3:43397281-43397300 | None:intergenic | 15.0% |
| !! | ACAAGAATAAAATAAAAACA+AGG | + | chr7_3:43397522-43397541 | None:intergenic | 15.0% |
| !! | AACAATTAATTCACTTAATT+TGG | + | chr7_3:43397556-43397575 | None:intergenic | 15.0% |
| !!! | GTACAATTCTTATTTAATTT+TGG | - | chr7_3:43397962-43397981 | Msa1105200:intron | 15.0% |
| !! | AAGTATAAGATAATTATATG+AGG | - | chr7_3:43398319-43398338 | Msa1105200:intron | 15.0% |
| !!! | TATTTTATTATACTTGTTGT+CGG | - | chr7_3:43398432-43398451 | Msa1105200:intron | 15.0% |
| !! | ATATATTTATATGAATTGTG+TGG | - | chr7_3:43398598-43398617 | Msa1105200:intron | 15.0% |
| !! | TATATTTATATGAATTGTGT+GGG | - | chr7_3:43398599-43398618 | Msa1105200:intron | 15.0% |
| !!! | TTATGATGAAATTTTTATGT+TGG | - | chr7_3:43399955-43399974 | Msa1105200:intron | 15.0% |
| !!! | TATGATGAAATTTTTATGTT+GGG | - | chr7_3:43399956-43399975 | Msa1105200:intron | 15.0% |
| !! | ATGATAAGTTGTTAAAATAT+AGG | - | chr7_3:43400358-43400377 | Msa1105200:intron | 15.0% |
| !! | TGATAAGTTGTTAAAATATA+GGG | - | chr7_3:43400359-43400378 | Msa1105200:intron | 15.0% |
| !! | ATATGAAATTTGAGAAATTA+GGG | + | chr7_3:43400665-43400684 | None:intergenic | 15.0% |
| !! | TGTTTATGTTTACTATTATC+AGG | - | chr7_3:43396050-43396069 | Msa1105200:intron | 20.0% |
| !! | GTTTATGTTTACTATTATCA+GGG | - | chr7_3:43396051-43396070 | Msa1105200:intron | 20.0% |
| !! | TTATGGCTTAAATATGAAAA+AGG | + | chr7_3:43396712-43396731 | None:intergenic | 20.0% |
| !! | TATTATAAATAGAGAAGCTA+AGG | - | chr7_3:43396905-43396924 | Msa1105200:intron | 20.0% |
| !! | GATTTCAGAAAAACAATATA+AGG | - | chr7_3:43397027-43397046 | Msa1105200:intron | 20.0% |
| !! | AGAAAAACAATATAAGGTAA+GGG | - | chr7_3:43397033-43397052 | Msa1105200:intron | 20.0% |
| !! | ATCGATAAAATAAATAGTCA+CGG | + | chr7_3:43397363-43397382 | None:intergenic | 20.0% |
| !!! | TAATTCACTTAATTTGGATT+TGG | + | chr7_3:43397550-43397569 | None:intergenic | 20.0% |
| !! | AGATATTATCAATTGAAAAC+TGG | - | chr7_3:43397940-43397959 | Msa1105200:intron | 20.0% |
| !! | TATAAAGATGTGATATTTGA+AGG | - | chr7_3:43398152-43398171 | Msa1105200:intron | 20.0% |
| !!! | TATGTAAAAGCATATAGTAT+AGG | + | chr7_3:43398478-43398497 | None:intergenic | 20.0% |
| !!! | ATATTTTACAAGAACCATAT+AGG | + | chr7_3:43398582-43398601 | None:intergenic | 20.0% |
| !! | GACATGTAAATATTTATGAA+AGG | - | chr7_3:43398621-43398640 | Msa1105200:intron | 20.0% |
| !! | TAAATAACATAGCAACATTA+AGG | + | chr7_3:43398911-43398930 | None:intergenic | 20.0% |
| !! | TTATATGTTGTAAATGTTGT+TGG | - | chr7_3:43398938-43398957 | Msa1105200:intron | 20.0% |
| !! | TATCATCTTATAATCATCAT+AGG | + | chr7_3:43399427-43399446 | None:intergenic | 20.0% |
| !!! | ATTTTTGATGTTGAATTTGA+AGG | - | chr7_3:43399860-43399879 | Msa1105200:intron | 20.0% |
| !! | CAGAATATTTAAATCCTAAA+CGG | + | chr7_3:43399933-43399952 | None:intergenic | 20.0% |
| !!! | AAATTTTTATGTTGGGAAAA+CGG | - | chr7_3:43399963-43399982 | Msa1105200:intron | 20.0% |
| !! | TTTGAAGAAGCAATAATTAA+AGG | - | chr7_3:43400135-43400154 | Msa1105200:intron | 20.0% |
| !! | TAAAGGCTTAAATATGAAAA+AGG | - | chr7_3:43400152-43400171 | Msa1105200:intron | 20.0% |
| !! | CATATGAAATTTGAGAAATT+AGG | + | chr7_3:43400666-43400685 | None:intergenic | 20.0% |
| !!! | CAGGTTTTGATAATAATTTT+GGG | + | chr7_3:43400823-43400842 | None:intergenic | 20.0% |
| !! | AAAATTATTATCAAAACCTG+CGG | - | chr7_3:43400823-43400842 | Msa1105200:CDS | 20.0% |
| !!! | GACTAGTTTAGATAAAGAAA+AGG | - | chr7_3:43396021-43396040 | Msa1105200:intron | 25.0% |
| ! | ACGAAAGCTTAAATTTATTC+AGG | + | chr7_3:43396083-43396102 | None:intergenic | 25.0% |
| !! | TTTATTTAGAACCATAATCC+AGG | + | chr7_3:43396171-43396190 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTCTTTCTATTCC+TGG | - | chr7_3:43396324-43396343 | Msa1105200:intron | 25.0% |
| !!! | TGTTTTTTCTTTCTATTCCT+GGG | - | chr7_3:43396325-43396344 | Msa1105200:intron | 25.0% |
| !!! | GTGTTGATGATTTATGAATA+TGG | - | chr7_3:43396352-43396371 | Msa1105200:intron | 25.0% |
| !!! | TCTTCTTAACCTTTTGAAAA+TGG | + | chr7_3:43396621-43396640 | None:intergenic | 25.0% |
| ! | CAGAAAAACAATATAAGGTA+AGG | - | chr7_3:43397032-43397051 | Msa1105200:intron | 25.0% |
| !! | AACATGATTTAGGATGAATT+TGG | - | chr7_3:43397106-43397125 | Msa1105200:intron | 25.0% |
| !! | ACATGATTTAGGATGAATTT+GGG | - | chr7_3:43397107-43397126 | Msa1105200:intron | 25.0% |
| !!! | TTTGGGAGATTTTAAGAATT+AGG | - | chr7_3:43397124-43397143 | Msa1105200:intron | 25.0% |
| !!! | TTGGGAGATTTTAAGAATTA+GGG | - | chr7_3:43397125-43397144 | Msa1105200:intron | 25.0% |
| ! | TTTAAGAATTAGGGTTTAAG+TGG | - | chr7_3:43397134-43397153 | Msa1105200:intron | 25.0% |
| ! | AAAACAATGGTGAAAAACAA+TGG | + | chr7_3:43397268-43397287 | None:intergenic | 25.0% |
| ! | AATCAACTAGAGAAACAAAT+AGG | + | chr7_3:43397387-43397406 | None:intergenic | 25.0% |
| !! | GATTGATACTTTTGAATTCA+TGG | - | chr7_3:43397403-43397422 | Msa1105200:intron | 25.0% |
| ! | AAAATAAAAACAAGGCTCAT+CGG | + | chr7_3:43397514-43397533 | None:intergenic | 25.0% |
| ! | ATATCAATAGCGAAACAAAT+TGG | + | chr7_3:43397646-43397665 | None:intergenic | 25.0% |
| !!! | AGTCCTAATTTTGATAAATG+TGG | - | chr7_3:43397773-43397792 | Msa1105200:intron | 25.0% |
| !!! | GTCCTAATTTTGATAAATGT+GGG | - | chr7_3:43397774-43397793 | Msa1105200:intron | 25.0% |
| ! | AACCCACATTTATCAAAATT+AGG | + | chr7_3:43397779-43397798 | None:intergenic | 25.0% |
| !! | TATTTGGTTTAGTACATGTT+TGG | - | chr7_3:43397852-43397871 | Msa1105200:intron | 25.0% |
| ! | TGAGTTAAAGAAAAACGATA+AGG | - | chr7_3:43398177-43398196 | Msa1105200:intron | 25.0% |
| ! | AAGGTTAGAGATAGTAATAA+CGG | - | chr7_3:43398196-43398215 | Msa1105200:intron | 25.0% |
| ! | CACACTATTTACTCTATTAA+GGG | + | chr7_3:43398262-43398281 | None:intergenic | 25.0% |
| ! | TCACACTATTTACTCTATTA+AGG | + | chr7_3:43398263-43398282 | None:intergenic | 25.0% |
| ! | TTATATGAGGAATTATAGAG+TGG | - | chr7_3:43398332-43398351 | Msa1105200:intron | 25.0% |
| ! | GTACCTATATAAACTAAACA+AGG | + | chr7_3:43398515-43398534 | None:intergenic | 25.0% |
| ! | TACTAATATAAGTAGTGTCA+TGG | - | chr7_3:43398556-43398575 | Msa1105200:intron | 25.0% |
| ! | AATCTTAGTCATCTTAACTT+AGG | + | chr7_3:43398816-43398835 | None:intergenic | 25.0% |
| ! | ATTGCATACTCATTAAAGAT+GGG | - | chr7_3:43399095-43399114 | Msa1105200:intron | 25.0% |
| ! | TTTGTGCTCAAATTAAAGTT+GGG | - | chr7_3:43399137-43399156 | Msa1105200:intron | 25.0% |
| ! | TTTGTGCTCAAATTAAAGTT+GGG | - | chr7_3:43399137-43399156 | Msa1105200:intron | 25.0% |
| ! | GTTTAACATACTAAAAGTCT+TGG | + | chr7_3:43399817-43399836 | None:intergenic | 25.0% |
| !! | AATTTTTATGTTGGGAAAAC+GGG | - | chr7_3:43399964-43399983 | Msa1105200:intron | 25.0% |
| ! | GGTTATTTATGTATGGTAAT+TGG | + | chr7_3:43400601-43400620 | None:intergenic | 25.0% |
| !!! | GCAGGTTTTGATAATAATTT+TGG | + | chr7_3:43400824-43400843 | None:intergenic | 25.0% |
| ! | AAATTATTATCAAAACCTGC+GGG | - | chr7_3:43400824-43400843 | Msa1105200:CDS | 25.0% |
| ATGCTGATAAGTCACAAATT+TGG | - | chr7_3:43395930-43395949 | Msa1105200:intron | 30.0% | |
| ! | TTTAATGTGTTGATGAAGAG+TGG | - | chr7_3:43396250-43396269 | Msa1105200:intron | 30.0% |
| ! | TTAATGTGTTGATGAAGAGT+GGG | - | chr7_3:43396251-43396270 | Msa1105200:intron | 30.0% |
| CAAAAACGTAAATTACCACA+GGG | + | chr7_3:43396468-43396487 | None:intergenic | 30.0% | |
| TCAAAAACGTAAATTACCAC+AGG | + | chr7_3:43396469-43396488 | None:intergenic | 30.0% | |
| ! | TGATTAGTTGTGTAAAGACA+GGG | + | chr7_3:43396499-43396518 | None:intergenic | 30.0% |
| ! | ATGATTAGTTGTGTAAAGAC+AGG | + | chr7_3:43396500-43396519 | None:intergenic | 30.0% |
| TCAAAAGGTTAAGAAGATAC+AGG | - | chr7_3:43396624-43396643 | Msa1105200:intron | 30.0% | |
| CAAAAGGTTAAGAAGATACA+GGG | - | chr7_3:43396625-43396644 | Msa1105200:intron | 30.0% | |
| TTCGCAACAAAAAAACTTAC+AGG | - | chr7_3:43396653-43396672 | Msa1105200:intron | 30.0% | |
| TCGCAACAAAAAAACTTACA+GGG | - | chr7_3:43396654-43396673 | Msa1105200:intron | 30.0% | |
| !! | AGGACGAAATTCTTTTAAGT+TGG | - | chr7_3:43396765-43396784 | Msa1105200:intron | 30.0% |
| !!! | GGACGAAATTCTTTTAAGTT+GGG | - | chr7_3:43396766-43396785 | Msa1105200:intron | 30.0% |
| !!! | GACGAAATTCTTTTAAGTTG+GGG | - | chr7_3:43396767-43396786 | Msa1105200:intron | 30.0% |
| !! | TTTTACGTTAAACCGCTTTT+TGG | - | chr7_3:43396939-43396958 | Msa1105200:intron | 30.0% |
| ! | GAGAATTGATGATTAGATGA+TGG | - | chr7_3:43397156-43397175 | Msa1105200:intron | 30.0% |
| !! | ATTAGATGATGGAAAACCAT+TGG | - | chr7_3:43397167-43397186 | Msa1105200:intron | 30.0% |
| AAACCATTGGATTGATGTAA+AGG | - | chr7_3:43397180-43397199 | Msa1105200:intron | 30.0% | |
| AACCATTGGATTGATGTAAA+GGG | - | chr7_3:43397181-43397200 | Msa1105200:intron | 30.0% | |
| ACACAATTATTTGTAACTCC+AGG | + | chr7_3:43397431-43397450 | None:intergenic | 30.0% | |
| ! | AACATAATTTTCAGTGAGCA+TGG | + | chr7_3:43397470-43397489 | None:intergenic | 30.0% |
| ! | CCAAAAGAAATTGATTCATG+CGG | + | chr7_3:43397674-43397693 | None:intergenic | 30.0% |
| ! | CTGCATGAATCAATTTCTTT+TGG | - | chr7_3:43397731-43397750 | Msa1105200:intron | 30.0% |
| AAGGTCCAAATTAATCATGA+GGG | + | chr7_3:43397910-43397929 | None:intergenic | 30.0% | |
| ! | CTTAATTTGGGAAAGAAACA+TGG | + | chr7_3:43397988-43398007 | None:intergenic | 30.0% |
| GGAAAATATCAAGTTACTTG+AGG | - | chr7_3:43398223-43398242 | Msa1105200:intron | 30.0% | |
| ! | GACCAAGAATAATTTTCTCA+AGG | - | chr7_3:43398374-43398393 | Msa1105200:intron | 30.0% |
| CACCTTGAGAAAATTATTCT+TGG | + | chr7_3:43398379-43398398 | None:intergenic | 30.0% | |
| ! | CGTCCTTGTTTAGTTTATAT+AGG | - | chr7_3:43398509-43398528 | Msa1105200:intron | 30.0% |
| TAAGAAGTTGTCCAAGATTA+TGG | - | chr7_3:43399021-43399040 | Msa1105200:intron | 30.0% | |
| CTTATACAACTCCATAATCT+TGG | + | chr7_3:43399035-43399054 | None:intergenic | 30.0% | |
| CATCTTTAATGAGTATGCAA+TGG | + | chr7_3:43399096-43399115 | None:intergenic | 30.0% | |
| CATTGCATACTCATTAAAGA+TGG | - | chr7_3:43399094-43399113 | Msa1105200:intron | 30.0% | |
| TTGCATACTCATTAAAGATG+GGG | - | chr7_3:43399096-43399115 | Msa1105200:intron | 30.0% | |
| !! | CAACTTTAATTTGAGCACAA+AGG | + | chr7_3:43399138-43399157 | None:intergenic | 30.0% |
| CTTTGTGCTCAAATTAAAGT+TGG | - | chr7_3:43399136-43399155 | Msa1105200:intron | 30.0% | |
| TTGTGCTCAAATTAAAGTTG+GGG | - | chr7_3:43399138-43399157 | Msa1105200:intron | 30.0% | |
| !! | CAACTTTAATTTGAGCACAA+AGG | + | chr7_3:43399138-43399157 | None:intergenic | 30.0% |
| CTTTGTGCTCAAATTAAAGT+TGG | - | chr7_3:43399136-43399155 | Msa1105200:intron | 30.0% | |
| TTGTGCTCAAATTAAAGTTG+GGG | - | chr7_3:43399138-43399157 | Msa1105200:intron | 30.0% | |
| CAACATAAATGAGCGTAATT+AGG | + | chr7_3:43399286-43399305 | None:intergenic | 30.0% | |
| !! | AGACTTATGAGATTTTGAAG+AGG | - | chr7_3:43399783-43399802 | Msa1105200:intron | 30.0% |
| ! | ATTTTTATGTTGGGAAAACG+GGG | - | chr7_3:43399965-43399984 | Msa1105200:intron | 30.0% |
| TCGCAACAAAAAAACTTACA+GGG | + | chr7_3:43396654-43396673 | None:intergenic | 30.0% | |
| TTCGCAACAAAAAAACTTAC+AGG | + | chr7_3:43396653-43396672 | None:intergenic | 30.0% | |
| CAAAAGGTTAGCAAAATACA+GGG | + | chr7_3:43400239-43400258 | None:intergenic | 30.0% | |
| !! | TTTTGCTAACCTTTTGGAAA+AGG | - | chr7_3:43400243-43400262 | Msa1105200:intron | 30.0% |
| TCAAAAACGTAAATTGACAC+AGG | - | chr7_3:43400389-43400408 | Msa1105200:intron | 30.0% | |
| CAAAAACGTAAATTGACACA+GGG | - | chr7_3:43400390-43400409 | Msa1105200:intron | 30.0% | |
| GATGTATTCTTGAAGGATAT+GGG | + | chr7_3:43400525-43400544 | None:intergenic | 30.0% | |
| AGATGTATTCTTGAAGGATA+TGG | + | chr7_3:43400526-43400545 | None:intergenic | 30.0% | |
| TGAGAAAGATGTATTCTTGA+AGG | + | chr7_3:43400532-43400551 | None:intergenic | 30.0% | |
| GGAATTGTGGAAAAAAAAGA+GGG | + | chr7_3:43400556-43400575 | None:intergenic | 30.0% | |
| TGAGTGAGAAAAGATGAAAT+GGG | + | chr7_3:43400628-43400647 | None:intergenic | 30.0% | |
| AACACACACATACTTGAAAA+GGG | - | chr7_3:43400719-43400738 | Msa1105200:intron | 30.0% | |
| TTCAACATACACATACTTGA+AGG | - | chr7_3:43400746-43400765 | Msa1105200:CDS | 30.0% | |
| TCTCAACATTGCTGTGAAAT+CGG | - | chr7_3:43395773-43395792 | Msa1105200:CDS | 35.0% | |
| ! | GATGTTCTTGACAGCTATTT+TGG | - | chr7_3:43395869-43395888 | Msa1105200:CDS | 35.0% |
| AACTAGTCATGCACATTTCA+AGG | + | chr7_3:43396009-43396028 | None:intergenic | 35.0% | |
| TTTCTTTCTATTCCTGGGTT+TGG | - | chr7_3:43396330-43396349 | Msa1105200:intron | 35.0% | |
| TTAAGATGAAGAAGACAACG+AGG | - | chr7_3:43396378-43396397 | Msa1105200:intron | 35.0% | |
| TAAGATGAAGAAGACAACGA+GGG | - | chr7_3:43396379-43396398 | Msa1105200:intron | 35.0% | |
| !!! | GTTTTTGATTTTAGTCCCTG+TGG | - | chr7_3:43396450-43396469 | Msa1105200:intron | 35.0% |
| ! | TTTTTGTTGACAGAAGCTGA+CGG | - | chr7_3:43396589-43396608 | Msa1105200:intron | 35.0% |
| TGAAAAAGGTCCTTGTAAGT+TGG | + | chr7_3:43396698-43396717 | None:intergenic | 35.0% | |
| ! | TTCTTGTGCTTTGAATTTCG+AGG | - | chr7_3:43396745-43396764 | Msa1105200:intron | 35.0% |
| GACTGCATCTAACATGATTT+AGG | - | chr7_3:43397096-43397115 | Msa1105200:intron | 35.0% | |
| ACCATTGGATTGATGTAAAG+GGG | - | chr7_3:43397182-43397201 | Msa1105200:intron | 35.0% | |
| AGAAGGGTTGTATGAACATA+TGG | - | chr7_3:43397222-43397241 | Msa1105200:intron | 35.0% | |
| GAAGGGTTGTATGAACATAT+GGG | - | chr7_3:43397223-43397242 | Msa1105200:intron | 35.0% | |
| TATGAACATATGGGTAGTGA+AGG | - | chr7_3:43397232-43397251 | Msa1105200:intron | 35.0% | |
| ATGAACATATGGGTAGTGAA+GGG | - | chr7_3:43397233-43397252 | Msa1105200:intron | 35.0% | |
| ! | ACTTTTGAATTCATGGATCC+TGG | - | chr7_3:43397410-43397429 | Msa1105200:intron | 35.0% |
| TGTCGAAATCAAATATGTGC+CGG | + | chr7_3:43397600-43397619 | None:intergenic | 35.0% | |
| ! | CCGCATGAATCAATTTCTTT+TGG | - | chr7_3:43397671-43397690 | Msa1105200:intron | 35.0% |
| AAATTAATCATGAGGGTTCG+TGG | + | chr7_3:43397903-43397922 | None:intergenic | 35.0% | |
| ACGAACCCTCATGATTAATT+TGG | - | chr7_3:43397902-43397921 | Msa1105200:intron | 35.0% | |
| CAAGGTCCAAATTAATCATG+AGG | + | chr7_3:43397911-43397930 | None:intergenic | 35.0% | |
| TATGAGGAATTATAGAGTGG+TGG | - | chr7_3:43398335-43398354 | Msa1105200:intron | 35.0% | |
| GTGTAGTGTTAAGATGAACT+TGG | - | chr7_3:43398745-43398764 | Msa1105200:intron | 35.0% | |
| TGTTAAGATGAACTTGGAGT+AGG | - | chr7_3:43398751-43398770 | Msa1105200:intron | 35.0% | |
| TGCATACTCATTAAAGATGG+GGG | - | chr7_3:43399097-43399116 | Msa1105200:intron | 35.0% | |
| TGTGCTCAAATTAAAGTTGG+GGG | - | chr7_3:43399139-43399158 | Msa1105200:intron | 35.0% | |
| AAATTAAAGTTGGGGGCTTT+AGG | - | chr7_3:43399146-43399165 | Msa1105200:intron | 35.0% | |
| TGTGCTCAAATTAAAGTTGG+GGG | - | chr7_3:43399139-43399158 | Msa1105200:intron | 35.0% | |
| AAATTAAAGTTGGGGGCTTT+GGG | - | chr7_3:43399146-43399165 | Msa1105200:intron | 35.0% | |
| CATAACAAGAAGTTTCACGA+TGG | - | chr7_3:43399329-43399348 | Msa1105200:intron | 35.0% | |
| AGGTTCATAAAAGACACGTA+AGG | + | chr7_3:43399743-43399762 | None:intergenic | 35.0% | |
| CAAAAATCTGAACTTTGCAG+CGG | + | chr7_3:43399847-43399866 | None:intergenic | 35.0% | |
| AAGTATGTGACATTCCGTTT+AGG | - | chr7_3:43399916-43399935 | Msa1105200:intron | 35.0% | |
| CCAAAAGGTTAGCAAAATAC+AGG | + | chr7_3:43400240-43400259 | None:intergenic | 35.0% | |
| ! | CCTGTATTTTGCTAACCTTT+TGG | - | chr7_3:43400237-43400256 | Msa1105200:intron | 35.0% |
| ! | TTTTTGTTGACGAAAGCTGA+TGG | + | chr7_3:43400275-43400294 | None:intergenic | 35.0% |
| GAAGAAGACTGAAATTTGAG+AGG | + | chr7_3:43400449-43400468 | None:intergenic | 35.0% | |
| ! | TTCTTGAAGGATATGGGTTT+TGG | + | chr7_3:43400519-43400538 | None:intergenic | 35.0% |
| GGGAATTGTGGAAAAAAAAG+AGG | + | chr7_3:43400557-43400576 | None:intergenic | 35.0% | |
| AGCAATCTGGAAGAATAAGA+GGG | + | chr7_3:43400577-43400596 | None:intergenic | 35.0% | |
| TAGCAATCTGGAAGAATAAG+AGG | + | chr7_3:43400578-43400597 | None:intergenic | 35.0% | |
| ! | TATGGTAATTGGTAGCAATC+TGG | + | chr7_3:43400590-43400609 | None:intergenic | 35.0% |
| GGGATCTGGTTATTTATGTA+TGG | + | chr7_3:43400608-43400627 | None:intergenic | 35.0% | |
| AGAAAAGATGAAATGGGATC+TGG | + | chr7_3:43400622-43400641 | None:intergenic | 35.0% | |
| GTGAGTGAGAAAAGATGAAA+TGG | + | chr7_3:43400629-43400648 | None:intergenic | 35.0% | |
| TTTCATATGTTGAAAACGCC+AGG | - | chr7_3:43400677-43400696 | Msa1105200:intron | 35.0% | |
| CAACACACACATACTTGAAA+AGG | - | chr7_3:43400718-43400737 | Msa1105200:intron | 35.0% | |
| ACACACACATACTTGAAAAG+GGG | - | chr7_3:43400720-43400739 | Msa1105200:intron | 35.0% | |
| TACTTGAAGGCTATGAAAAG+AGG | - | chr7_3:43400759-43400778 | Msa1105200:CDS | 35.0% | |
| TCTCAACATTGCTGTGAAAT+CGG | - | chr7_3:43395773-43395792 | Msa1105200:CDS | 35.0% | |
| AGAAAAGCTTCGATGAGGAA+AGG | + | chr7_3:43395841-43395860 | None:intergenic | 40.0% | |
| TTCTCAGAAAAGCTTCGATG+AGG | + | chr7_3:43395846-43395865 | None:intergenic | 40.0% | |
| !!! | GACAGCTATTTTGGCAAACT+AGG | - | chr7_3:43395878-43395897 | Msa1105200:CDS | 40.0% |
| TTGTAGCCAAGCTTACATGA+TGG | - | chr7_3:43395904-43395923 | Msa1105200:intron | 40.0% | |
| TGTAGCCAAGCTTACATGAT+GGG | - | chr7_3:43395905-43395924 | Msa1105200:intron | 40.0% | |
| ! | TTCTATGTGAGTCTTGTACC+TGG | - | chr7_3:43396150-43396169 | Msa1105200:intron | 40.0% |
| ! | TGAGTCTTGTACCTGGATTA+TGG | - | chr7_3:43396157-43396176 | Msa1105200:intron | 40.0% |
| AAATCATCAACACCAAACCC+AGG | + | chr7_3:43396345-43396364 | None:intergenic | 40.0% | |
| AGTTGGCACATTTGATGAGA+TGG | + | chr7_3:43396531-43396550 | None:intergenic | 40.0% | |
| CAAAAATGCGCCAACTTACA+AGG | - | chr7_3:43396685-43396704 | Msa1105200:intron | 40.0% | |
| !!! | TACGTTAAACCGCTTTTTGG+AGG | - | chr7_3:43396942-43396961 | Msa1105200:intron | 40.0% |
| CCATTGGATTGATGTAAAGG+GGG | - | chr7_3:43397183-43397202 | Msa1105200:intron | 40.0% | |
| CATTGGATTGATGTAAAGGG+GGG | - | chr7_3:43397184-43397203 | Msa1105200:intron | 40.0% | |
| ATTGGATTGATGTAAAGGGG+GGG | - | chr7_3:43397185-43397204 | Msa1105200:intron | 40.0% | |
| GGAGACTCTATTCATCAGAA+GGG | - | chr7_3:43397206-43397225 | Msa1105200:intron | 40.0% | |
| ! | ACGCCGTATTTGTTCTTTTC+CGG | - | chr7_3:43397578-43397597 | Msa1105200:intron | 40.0% |
| GTGCCGGAAAAGAACAAATA+CGG | + | chr7_3:43397584-43397603 | None:intergenic | 40.0% | |
| TAGAGATAGTAATAACGGCG+TGG | - | chr7_3:43398201-43398220 | Msa1105200:intron | 40.0% | |
| AGAGATAGTAATAACGGCGT+GGG | - | chr7_3:43398202-43398221 | Msa1105200:intron | 40.0% | |
| ! | GAGTGGTGGAATGAAATAGT+TGG | - | chr7_3:43398349-43398368 | Msa1105200:intron | 40.0% |
| AAGTAGTGTCATGGCCTATA+TGG | - | chr7_3:43398565-43398584 | Msa1105200:intron | 40.0% | |
| AGATGAACTTGGAGTAGGAA+AGG | - | chr7_3:43398756-43398775 | Msa1105200:intron | 40.0% | |
| CTAGATTATCAAAGCTGTCC+AGG | - | chr7_3:43398787-43398806 | Msa1105200:intron | 40.0% | |
| TCATCTTAACTTAGGCTTCC+TGG | + | chr7_3:43398808-43398827 | None:intergenic | 40.0% | |
| TGTCTTGAAGTTGCATGAGT+CGG | - | chr7_3:43398981-43399000 | Msa1105200:intron | 40.0% | |
| CACGTTGATGTCTAAGTTGT+AGG | - | chr7_3:43399060-43399079 | Msa1105200:intron | 40.0% | |
| TCATTAAAGATGGGGGCTTT+AGG | - | chr7_3:43399104-43399123 | Msa1105200:intron | 40.0% | |
| CAAATTAAAGTTGGGGGCTT+TGG | - | chr7_3:43399145-43399164 | Msa1105200:intron | 40.0% | |
| CTTTGTGCTCAAACTACGTT+GGG | - | chr7_3:43399220-43399239 | Msa1105200:intron | 40.0% | |
| TTTGTGCTCAAACTACGTTG+GGG | - | chr7_3:43399221-43399240 | Msa1105200:intron | 40.0% | |
| CGCTCATTTATGTTGCTGAA+TGG | - | chr7_3:43399291-43399310 | Msa1105200:intron | 40.0% | |
| AGGGCAACATTACAACAGAA+GGG | + | chr7_3:43399606-43399625 | None:intergenic | 40.0% | |
| AAGGGCAACATTACAACAGA+AGG | + | chr7_3:43399607-43399626 | None:intergenic | 40.0% | |
| TTGTAATGTTGCCCTTACGT+TGG | - | chr7_3:43399611-43399630 | Msa1105200:intron | 40.0% | |
| GTTACAATTGGTATCAGAGC+AGG | - | chr7_3:43399989-43400008 | Msa1105200:intron | 40.0% | |
| TGAAAAAGGTCCCTGTAAGT+TGG | - | chr7_3:43400166-43400185 | Msa1105200:intron | 40.0% | |
| CAAAAATGCGCCAACTTACA+GGG | + | chr7_3:43396685-43396704 | None:intergenic | 40.0% | |
| GCAAGGTATGACATAGATTG+GGG | + | chr7_3:43400487-43400506 | None:intergenic | 40.0% | |
| CGCAAGGTATGACATAGATT+GGG | + | chr7_3:43400488-43400507 | None:intergenic | 40.0% | |
| !!! | GGATATGGGTTTTGGTTCAA+GGG | + | chr7_3:43400511-43400530 | None:intergenic | 40.0% |
| !!! | AGGATATGGGTTTTGGTTCA+AGG | + | chr7_3:43400512-43400531 | None:intergenic | 40.0% |
| GGAAGAATAAGAGGGAATTG+TGG | + | chr7_3:43400569-43400588 | None:intergenic | 40.0% | |
| AAAACGCCAGGTTGTGAAAA+GGG | - | chr7_3:43400689-43400708 | Msa1105200:intron | 40.0% | |
| CTGCAAGCTTAAGAATTGCA+GGG | + | chr7_3:43400873-43400892 | None:intergenic | 40.0% | |
| TCTGCAAGCTTAAGAATTGC+AGG | + | chr7_3:43400874-43400893 | None:intergenic | 40.0% | |
| GCAATTCTTAAGCTTGCAGA+TGG | - | chr7_3:43400874-43400893 | Msa1105200:CDS | 40.0% | |
| AGAAAAGCTTCGATGAGGAA+AGG | + | chr7_3:43395841-43395860 | None:intergenic | 40.0% | |
| TTCTCAGAAAAGCTTCGATG+AGG | + | chr7_3:43395846-43395865 | None:intergenic | 40.0% | |
| ! | GCTGTTCTTGACAGCTATTT+TGG | - | chr7_3:43400993-43401012 | Msa1105200:CDS | 40.0% |
| AAATCGGTGAGATACACTCG+CGG | - | chr7_3:43395789-43395808 | Msa1105200:CDS | 45.0% | |
| TGCTAAGCTAGAAGCTTCAC+CGG | - | chr7_3:43395970-43395989 | Msa1105200:intron | 45.0% | |
| AAAAACGCCACTGTGGCAAA+CGG | + | chr7_3:43396574-43396593 | None:intergenic | 45.0% | |
| TGTCAACAAAAACGCCACTG+TGG | + | chr7_3:43396581-43396600 | None:intergenic | 45.0% | |
| ! | CGGCAAGGACCATTTTCAAA+AGG | - | chr7_3:43396609-43396628 | Msa1105200:intron | 45.0% |
| !!! | AAACCGCTTTTTGGAGGAAG+AGG | - | chr7_3:43396948-43396967 | Msa1105200:intron | 45.0% |
| !!! | AACCGCTTTTTGGAGGAAGA+GGG | - | chr7_3:43396949-43396968 | Msa1105200:intron | 45.0% |
| AGCAGCGTTCTTCGTTCATT+GGG | + | chr7_3:43397004-43397023 | None:intergenic | 45.0% | |
| AAGCAGCGTTCTTCGTTCAT+TGG | + | chr7_3:43397005-43397024 | None:intergenic | 45.0% | |
| CCCCCTTTACATCAATCCAA+TGG | + | chr7_3:43397186-43397205 | None:intergenic | 45.0% | |
| GGGAGACTCTATTCATCAGA+AGG | - | chr7_3:43397205-43397224 | Msa1105200:intron | 45.0% | |
| ! | CTCATCGGTTGCAAAAGTCA+AGG | + | chr7_3:43397499-43397518 | None:intergenic | 45.0% |
| CATGAGGGTTCGTGGAAAAT+AGG | + | chr7_3:43397895-43397914 | None:intergenic | 45.0% | |
| GTCGGTACAGTCTATTTGCA+AGG | - | chr7_3:43398450-43398469 | Msa1105200:intron | 45.0% | |
| GAACTTGGAGTAGGAAAGGA+AGG | - | chr7_3:43398760-43398779 | Msa1105200:intron | 45.0% | |
| AATTTGAGCACAAAGGCTGC+CGG | + | chr7_3:43399131-43399150 | None:intergenic | 45.0% | |
| AATTTGAGCACAAAGGCTGC+CGG | + | chr7_3:43399131-43399150 | None:intergenic | 45.0% | |
| CCAACGTAGTTTGAGCACAA+AGG | + | chr7_3:43399222-43399241 | None:intergenic | 45.0% | |
| CCTTTGTGCTCAAACTACGT+TGG | - | chr7_3:43399219-43399238 | Msa1105200:intron | 45.0% | |
| TTGTGCTCAAACTACGTTGG+GGG | - | chr7_3:43399222-43399241 | Msa1105200:intron | 45.0% | |
| ACAAGTGAGCATAAAGCTGC+CGG | + | chr7_3:43399256-43399275 | None:intergenic | 45.0% | |
| GGGCAACATTACAACAGAAG+GGG | + | chr7_3:43399605-43399624 | None:intergenic | 45.0% | |
| AGACTCCTCACATTGTGTCT+AGG | - | chr7_3:43399673-43399692 | Msa1105200:intron | 45.0% | |
| CTAGGTGCTCTGATACGTAA+CGG | - | chr7_3:43399691-43399710 | Msa1105200:intron | 45.0% | |
| TAGGTGCTCTGATACGTAAC+GGG | - | chr7_3:43399692-43399711 | Msa1105200:intron | 45.0% | |
| TACTAAAAGTCTTGGCACGC+AGG | + | chr7_3:43399809-43399828 | None:intergenic | 45.0% | |
| ! | GGAAAACGGGGTGTTACAAT+TGG | - | chr7_3:43399977-43399996 | Msa1105200:intron | 45.0% |
| CAATTGGTATCAGAGCAGGT+CGG | - | chr7_3:43399993-43400012 | Msa1105200:intron | 45.0% | |
| GACACAACGACTCATCTACT+TGG | + | chr7_3:43400028-43400047 | None:intergenic | 45.0% | |
| CCAAAAATGCGCCAACTTAC+AGG | + | chr7_3:43400180-43400199 | None:intergenic | 45.0% | |
| !! | CCTGTAAGTTGGCGCATTTT+TGG | - | chr7_3:43400177-43400196 | Msa1105200:intron | 45.0% |
| ! | TGGCAAGGACCTTTTCCAAA+AGG | + | chr7_3:43400255-43400274 | None:intergenic | 45.0% |
| TTTCGTCAACAAAAACGCCC+TGG | - | chr7_3:43400280-43400299 | Msa1105200:intron | 45.0% | |
| TAGATTGGGGAAAGTCTGAG+AGG | + | chr7_3:43400474-43400493 | None:intergenic | 45.0% | |
| GCGCAAGGTATGACATAGAT+TGG | + | chr7_3:43400489-43400508 | None:intergenic | 45.0% | |
| GAAAACGCCAGGTTGTGAAA+AGG | - | chr7_3:43400688-43400707 | Msa1105200:intron | 45.0% | |
| AAACGCCAGGTTGTGAAAAG+GGG | - | chr7_3:43400690-43400709 | Msa1105200:intron | 45.0% | |
| ! | AAATGCCCCTTTTCACAACC+TGG | + | chr7_3:43400698-43400717 | None:intergenic | 45.0% |
| ! | AAGCAATTTTGTAGTCCCGC+AGG | + | chr7_3:43400842-43400861 | None:intergenic | 45.0% |
| AAATCGGTGAGATACACTCG+CGG | - | chr7_3:43395789-43395808 | Msa1105200:CDS | 45.0% | |
| !! | AGAAAAAATAAATTTAATTA+TGG | + | chr7_3:43396729-43396748 | None:intergenic | 5.0% |
| !!! | ATTTATTTACTTTTTTTATT+TGG | - | chr7_3:43397836-43397855 | Msa1105200:intron | 5.0% |
| !! | AGTATAATAAAATAATTTAA+GGG | + | chr7_3:43398426-43398445 | None:intergenic | 5.0% |
| !! | AAGTATAATAAAATAATTTA+AGG | + | chr7_3:43398427-43398446 | None:intergenic | 5.0% |
| TGAGGAAAGGATTGAGCTCC+AGG | + | chr7_3:43395828-43395847 | None:intergenic | 50.0% | |
| CATCGCCCATCATGTAAGCT+TGG | + | chr7_3:43395913-43395932 | None:intergenic | 50.0% | |
| TCAAGGCCATAGACAGCTTC+CGG | + | chr7_3:43395992-43396011 | None:intergenic | 50.0% | |
| AAAGGTGGCAGGTCATGAGT+TGG | + | chr7_3:43396548-43396567 | None:intergenic | 50.0% | |
| !!! | ACCGCTTTTTGGAGGAAGAG+GGG | - | chr7_3:43396950-43396969 | Msa1105200:intron | 50.0% |
| TCCCCTCTTCCTCCAAAAAG+CGG | + | chr7_3:43396954-43396973 | None:intergenic | 50.0% | |
| TTTGGAGGAAGAGGGGAAAG+AGG | - | chr7_3:43396957-43396976 | Msa1105200:intron | 50.0% | |
| !! | AAAGATGGGGGCTTTAGGTC+CGG | - | chr7_3:43399109-43399128 | Msa1105200:intron | 50.0% |
| ATTTGAGCACAAAGGCTGCC+GGG | + | chr7_3:43399130-43399149 | None:intergenic | 50.0% | |
| AGTTTGAGCACAAAGGCTGC+CGG | + | chr7_3:43399215-43399234 | None:intergenic | 50.0% | |
| CAAGTGAGCATAAAGCTGCC+GGG | + | chr7_3:43399255-43399274 | None:intergenic | 50.0% | |
| GAGCACCTAGACACAATGTG+AGG | + | chr7_3:43399681-43399700 | None:intergenic | 50.0% | |
| ! | TGCTCTGATACGTAACGGGA+AGG | - | chr7_3:43399696-43399715 | Msa1105200:intron | 50.0% |
| ! | GCTCTGATACGTAACGGGAA+GGG | - | chr7_3:43399697-43399716 | Msa1105200:intron | 50.0% |
| ! | CTCTGATACGTAACGGGAAG+GGG | - | chr7_3:43399698-43399717 | Msa1105200:intron | 50.0% |
| ! | TCTGATACGTAACGGGAAGG+GGG | - | chr7_3:43399699-43399718 | Msa1105200:intron | 50.0% |
| CAACGACTCATCTACTTGGC+CGG | + | chr7_3:43400024-43400043 | None:intergenic | 50.0% | |
| GTTGACGAAAGCTGATGGCA+AGG | + | chr7_3:43400270-43400289 | None:intergenic | 50.0% | |
| AAAAACGCCCTGGTGGCTAA+CGG | - | chr7_3:43400290-43400309 | Msa1105200:intron | 50.0% | |
| ACACGTGGCAGTTCATGAGT+TGG | - | chr7_3:43400316-43400335 | Msa1105200:intron | 50.0% | |
| TGAGGAAAGGATTGAGCTCC+AGG | + | chr7_3:43395828-43395847 | None:intergenic | 50.0% | |
| CGCGGAAGCTTCATCTTTCC+TGG | - | chr7_3:43395807-43395826 | Msa1105200:CDS | 55.0% | |
| GCTTCACCGGAAGCTGTCTA+TGG | - | chr7_3:43395983-43396002 | Msa1105200:intron | 55.0% | |
| TGTGGCAAACGGAGCAAAGG+TGG | + | chr7_3:43396563-43396582 | None:intergenic | 55.0% | |
| CACTGTGGCAAACGGAGCAA+AGG | + | chr7_3:43396566-43396585 | None:intergenic | 55.0% | |
| CTTTGCTCCGTTTGCCACAG+TGG | - | chr7_3:43396564-43396583 | Msa1105200:intron | 55.0% | |
| GTTGACAGAAGCTGACGGCA+AGG | - | chr7_3:43396594-43396613 | Msa1105200:intron | 55.0% | |
| !! | AAAGTTGGGGGCTTTAGGCC+CGG | - | chr7_3:43399151-43399170 | Msa1105200:intron | 55.0% |
| GTTTGAGCACAAAGGCTGCC+GGG | + | chr7_3:43399214-43399233 | None:intergenic | 55.0% | |
| !! | TACGTTGGGGGCTTTAAGCC+CGG | - | chr7_3:43399234-43399253 | Msa1105200:intron | 55.0% |
| CCTGCGCGTTACCAACGTAA+GGG | + | chr7_3:43399625-43399644 | None:intergenic | 55.0% | |
| ACCTGCGCGTTACCAACGTA+AGG | + | chr7_3:43399626-43399645 | None:intergenic | 55.0% | |
| !! | TTGGTAACGCGCAGGTAACC+AGG | - | chr7_3:43399630-43399649 | Msa1105200:intron | 55.0% |
| !! | CAGGTAACCAGGACTAGCTG+TGG | - | chr7_3:43399641-43399660 | Msa1105200:intron | 55.0% |
| TCACGAACCACAGCTAGTCC+TGG | + | chr7_3:43399651-43399670 | None:intergenic | 55.0% | |
| GACTCATCTACTTGGCCGGA+CGG | + | chr7_3:43400020-43400039 | None:intergenic | 55.0% | |
| CGTCAACAAAAACGCCCTGG+TGG | - | chr7_3:43400283-43400302 | Msa1105200:intron | 55.0% | |
| !!! | GGTTTTGGTTCAAGGGCGCA+AGG | + | chr7_3:43400504-43400523 | None:intergenic | 55.0% |
| CGCGGAAGCTTCATCTTTCC+TGG | - | chr7_3:43395807-43395826 | Msa1105200:CDS | 55.0% | |
| GCAAACGGAGCAAAGGTGGC+AGG | + | chr7_3:43396559-43396578 | None:intergenic | 60.0% | |
| !! | AAAGTTGGGGGCTTTGGGCC+CGG | - | chr7_3:43399193-43399212 | Msa1105200:intron | 60.0% |
| !! | CCCTTACGTTGGTAACGCGC+AGG | - | chr7_3:43399622-43399641 | Msa1105200:intron | 60.0% |
| GTGTGCTCCGTTAGCCACCA+GGG | + | chr7_3:43400300-43400319 | None:intergenic | 60.0% | |
| TCAGAGCAGGTCGGTCCGTC+CGG | - | chr7_3:43400002-43400021 | Msa1105200:intron | 65.0% | |
| CGTGTGCTCCGTTAGCCACC+AGG | + | chr7_3:43400301-43400320 | None:intergenic | 65.0% | |
| GGTGGCTAACGGAGCACACG+TGG | - | chr7_3:43400301-43400320 | Msa1105200:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 43395771 | 43401020 | 43395771 | ID=Msa1105200;Name=Msa1105200 |
| chr7_3 | mRNA | 43395771 | 43401020 | 43395771 | ID=Msa1105200-mRNA-1;Parent=Msa1105200;Name=Msa1105200-mRNA-1;_AED=0.24;_eAED=0.25;_QI=0|0|0|1|0|0|3|0|134 |
| chr7_3 | exon | 43400920 | 43401020 | 43400920 | ID=Msa1105200-mRNA-1:exon:8948;Parent=Msa1105200-mRNA-1 |
| chr7_3 | exon | 43400743 | 43400908 | 43400743 | ID=Msa1105200-mRNA-1:exon:8947;Parent=Msa1105200-mRNA-1 |
| chr7_3 | exon | 43395771 | 43395905 | 43395771 | ID=Msa1105200-mRNA-1:exon:8946;Parent=Msa1105200-mRNA-1 |
| chr7_3 | CDS | 43400920 | 43401020 | 43400920 | ID=Msa1105200-mRNA-1:cds;Parent=Msa1105200-mRNA-1 |
| chr7_3 | CDS | 43400743 | 43400908 | 43400743 | ID=Msa1105200-mRNA-1:cds;Parent=Msa1105200-mRNA-1 |
| chr7_3 | CDS | 43395771 | 43395905 | 43395771 | ID=Msa1105200-mRNA-1:cds;Parent=Msa1105200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
