AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0506110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506110 MtrunA17_Chr3g0107541 90.385 156 15 0 3 158 325 480 1.15e-102 304
Msa0506110 MtrunA17_Chr3g0107551 85.350 157 23 0 2 158 3 159 2.60e-100 287
Msa0506110 MtrunA17_Chr3g0105761 72.078 154 41 1 5 158 1 152 7.52e-82 240
Msa0506110 MtrunA17_Chr3g0107611 67.949 156 50 0 3 158 330 485 9.09e-78 240
Msa0506110 MtrunA17_Chr8g0370641 66.026 156 53 0 3 158 318 473 2.95e-74 231
Msa0506110 MtrunA17_Chr8g0370651 64.744 156 55 0 3 158 322 477 7.22e-73 227
Msa0506110 MtrunA17_Chr8g0372591 65.734 143 48 1 3 144 2 144 2.05e-67 201
Msa0506110 MtrunA17_Chr8g0371761 53.472 144 56 1 23 155 1 144 4.58e-52 162
Msa0506110 MtrunA17_Chr7g0254641 40.252 159 94 1 1 158 308 466 5.49e-40 140
Msa0506110 MtrunA17_Chr2g0310351 37.419 155 94 1 4 158 1 152 9.64e-39 130
Msa0506110 MtrunA17_Chr4g0046681 38.158 152 93 1 1 152 28 178 2.26e-37 128
Msa0506110 MtrunA17_Chr2g0310391 36.709 158 97 1 1 158 291 445 2.00e-36 130
Msa0506110 MtrunA17_Chr3g0086651 40.523 153 90 1 4 155 303 455 2.81e-36 130
Msa0506110 MtrunA17_Chr3g0086661 41.176 153 89 1 4 155 303 455 6.77e-36 129
Msa0506110 MtrunA17_Chr2g0310381 36.538 156 96 1 3 158 293 445 8.86e-36 129
Msa0506110 MtrunA17_Chr8g0344151 38.854 157 93 1 2 158 303 456 1.40e-35 129
Msa0506110 MtrunA17_Chr3g0094171 39.474 152 92 0 4 155 307 458 3.46e-35 127
Msa0506110 MtrunA17_Chr8g0382901 36.709 158 97 1 1 158 273 427 2.24e-34 127
Msa0506110 MtrunA17_Chr8g0382901 35.897 156 97 1 3 158 754 906 1.59e-33 124
Msa0506110 MtrunA17_Chr8g0344181 37.662 154 93 1 2 155 305 455 1.08e-33 123
Msa0506110 MtrunA17_Chr4g0053621 37.255 153 88 1 4 156 303 447 1.54e-33 123
Msa0506110 MtrunA17_Chr1g0174441 37.908 153 93 2 3 155 328 478 3.13e-33 122
Msa0506110 MtrunA17_Chr1g0174431 38.411 151 88 2 9 155 6 155 6.28e-33 115
Msa0506110 MtrunA17_Chr7g0224551 37.576 165 89 4 1 155 291 451 8.75e-33 121
Msa0506110 MtrunA17_Chr4g0046351 36.774 155 93 2 7 157 304 457 2.12e-32 120
Msa0506110 MtrunA17_Chr6g0458561 36.538 156 98 1 1 156 325 479 4.90e-32 119
Msa0506110 MtrunA17_Chr4g0046331 36.306 157 93 2 7 157 304 459 4.97e-32 119
Msa0506110 MtrunA17_Chr4g0061381 37.255 153 95 1 4 155 300 452 5.10e-32 119
Msa0506110 MtrunA17_Chr3g0094231 36.129 155 99 0 4 158 300 454 5.87e-32 119
Msa0506110 MtrunA17_Chr8g0372331 60.256 78 31 0 81 158 1 78 6.05e-32 110
Msa0506110 MtrunA17_Chr4g0056951 38.065 155 93 2 1 155 309 460 8.74e-32 118
Msa0506110 MtrunA17_Chr7g0255531 35.294 153 96 1 3 155 296 445 8.91e-32 118
Msa0506110 MtrunA17_Chr1g0213671 37.762 143 87 1 16 158 319 459 1.27e-31 118
Msa0506110 MtrunA17_Chr3g0086691 35.897 156 99 1 1 155 300 455 1.70e-31 117
Msa0506110 MtrunA17_Chr4g0057001 40.127 157 83 2 3 155 316 465 1.78e-31 117
Msa0506110 MtrunA17_Chr7g0224561 36.364 165 91 4 1 155 291 451 1.86e-31 117
Msa0506110 MtrunA17_Chr2g0314721 38.182 165 90 2 3 158 308 469 2.22e-31 117
Msa0506110 MtrunA17_Chr8g0372251 36.667 150 92 2 3 152 305 451 2.25e-31 117
Msa0506110 MtrunA17_Chr4g0046321 35.484 155 95 2 7 157 304 457 2.84e-31 117
Msa0506110 MtrunA17_Chr2g0314731 37.576 165 91 2 3 158 297 458 3.53e-31 116
Msa0506110 MtrunA17_Chr1g0164211 38.562 153 91 1 3 155 294 443 5.29e-31 116
Msa0506110 MtrunA17_Chr8g0344191 36.364 154 96 1 2 155 336 487 6.22e-31 116
Msa0506110 MtrunA17_Chr1g0174451 35.294 153 97 2 3 155 307 457 7.62e-31 115
Msa0506110 MtrunA17_Chr8g0362701 33.333 153 101 1 3 155 305 456 1.03e-30 115
Msa0506110 MtrunA17_Chr1g0174461 37.584 149 91 2 3 151 306 452 1.18e-30 115
Msa0506110 MtrunA17_Chr5g0395381 33.548 155 100 1 1 155 270 421 1.20e-30 115
Msa0506110 MtrunA17_Chr5g0405001 37.255 153 93 2 3 155 313 462 1.38e-30 115
Msa0506110 MtrunA17_Chr5g0395321 34.194 155 99 1 1 155 295 446 1.41e-30 115
Msa0506110 MtrunA17_Chr7g0235551 35.256 156 97 2 3 155 303 457 1.42e-30 115
Msa0506110 MtrunA17_Chr4g0052861 37.162 148 85 1 4 151 299 438 1.47e-30 115
Msa0506110 MtrunA17_Chr5g0395331 34.194 155 99 1 1 155 302 453 1.88e-30 114
Msa0506110 MtrunA17_Chr7g0246151 37.662 154 93 1 2 155 301 451 2.11e-30 114
Msa0506110 MtrunA17_Chr8g0339331 36.129 155 98 1 4 158 315 468 2.12e-30 114
Msa0506110 MtrunA17_Chr7g0258211 35.503 169 88 3 3 158 304 464 3.96e-30 114
Msa0506110 MtrunA17_Chr8g0362481 32.026 153 103 1 3 155 236 387 6.01e-30 112
Msa0506110 MtrunA17_Chr7g0246221 35.948 153 95 1 3 155 303 452 6.49e-30 113
Msa0506110 MtrunA17_Chr8g0356001 36.774 155 95 1 4 158 307 458 6.57e-30 113
Msa0506110 MtrunA17_Chr7g0246121 36.129 155 96 1 1 155 298 449 6.71e-30 113
Msa0506110 MtrunA17_Chr4g0035921 35.294 153 96 2 3 155 313 462 7.22e-30 113
Msa0506110 MtrunA17_Chr4g0039901 37.255 153 93 1 4 156 300 449 8.01e-30 113
Msa0506110 MtrunA17_Chr2g0314781 37.838 148 80 2 20 158 1 145 9.01e-30 106
Msa0506110 MtrunA17_Chr3g0084921 35.948 153 96 2 7 158 312 463 9.34e-30 112
Msa0506110 MtrunA17_Chr1g0174481 33.987 153 99 2 3 155 301 451 1.45e-29 112
Msa0506110 MtrunA17_Chr5g0401681 37.086 151 87 1 1 151 296 438 1.53e-29 112
Msa0506110 MtrunA17_Chr6g0484841 37.838 148 88 2 9 155 309 453 2.22e-29 112
Msa0506110 MtrunA17_Chr1g0198191 35.443 158 99 3 1 157 313 468 3.55e-29 111
Msa0506110 MtrunA17_Chr4g0046661 37.584 149 92 1 4 152 25 172 4.79e-29 106
Msa0506110 MtrunA17_Chr4g0052881 36.184 152 89 1 4 155 300 443 7.58e-29 110
Msa0506110 MtrunA17_Chr4g0046631 38.158 152 93 1 4 155 319 469 1.01e-28 110
Msa0506110 MtrunA17_Chr5g0430131 33.766 154 98 2 3 155 302 452 1.23e-28 109
Msa0506110 MtrunA17_Chr4g0030701 37.333 150 92 2 7 155 313 461 1.39e-28 109
Msa0506110 MtrunA17_Chr4g0030711 36.601 153 89 3 7 155 316 464 1.54e-28 109
Msa0506110 MtrunA17_Chr6g0463801 34.839 155 98 1 1 155 295 446 1.76e-28 109
Msa0506110 MtrunA17_Chr4g0074581 34.395 157 102 1 1 156 339 495 1.91e-28 109
Msa0506110 MtrunA17_Chr3g0116681 33.333 156 101 1 3 158 303 455 1.98e-28 109
Msa0506110 MtrunA17_Chr6g0451811 35.526 152 97 1 4 155 5 155 2.23e-28 104
Msa0506110 MtrunA17_Chr5g0403331 34.641 153 97 1 3 155 304 453 3.99e-28 108
Msa0506110 MtrunA17_Chr7g0265611 37.975 158 92 4 3 158 316 469 5.75e-28 108
Msa0506110 MtrunA17_Chr6g0451691 37.671 146 90 1 10 155 334 478 7.45e-28 107
Msa0506110 MtrunA17_Chr5g0401691 34.459 148 91 1 4 151 314 455 7.53e-28 107
Msa0506110 MtrunA17_Chr6g0472311 32.895 152 99 1 7 158 320 468 9.05e-28 107
Msa0506110 MtrunA17_Chr4g0039391 36.184 152 93 1 4 155 304 451 1.05e-27 107
Msa0506110 MtrunA17_Chr4g0058201 32.484 157 95 2 3 155 292 441 1.30e-27 107
Msa0506110 MtrunA17_Chr1g0174471 33.333 153 100 2 3 155 322 472 1.52e-27 107
Msa0506110 MtrunA17_Chr5g0402981 35.211 142 90 2 15 155 3 143 1.54e-27 101
Msa0506110 MtrunA17_Chr6g0451681 32.680 153 102 1 3 155 276 427 1.81e-27 106
Msa0506110 MtrunA17_Chr4g0047661 32.692 156 102 1 3 158 317 469 1.88e-27 106
Msa0506110 MtrunA17_Chr8g0390871 35.000 160 91 4 3 157 26 177 2.27e-27 102
Msa0506110 MtrunA17_Chr6g0451751 34.839 155 100 1 4 158 324 477 2.29e-27 106
Msa0506110 MtrunA17_Chr6g0484811 32.051 156 102 2 3 157 304 456 2.53e-27 106
Msa0506110 MtrunA17_Chr4g0052851 34.194 155 94 1 1 155 287 433 2.76e-27 105
Msa0506110 MtrunA17_Chr7g0258221 33.333 153 100 2 3 155 305 455 2.92e-27 105
Msa0506110 MtrunA17_Chr4g0058261 31.847 157 104 1 1 157 329 482 3.01e-27 106
Msa0506110 MtrunA17_Chr1g0176831 35.152 165 95 2 3 158 327 488 3.90e-27 105
Msa0506110 MtrunA17_Chr8g0351801 32.515 163 102 3 3 158 309 470 4.59e-27 105
Msa0506110 MtrunA17_Chr5g0419451 31.818 154 101 2 3 155 319 469 5.24e-27 105
Msa0506110 MtrunA17_Chr1g0207841 36.184 152 88 3 7 155 318 463 5.57e-27 105
Msa0506110 MtrunA17_Chr2g0296661 36.538 156 91 1 1 156 301 448 5.74e-27 105
Msa0506110 MtrunA17_Chr6g0451771 32.903 155 103 1 1 155 19 172 5.86e-27 100
Msa0506110 MtrunA17_Chr8g0390881 35.443 158 89 4 3 155 304 453 6.06e-27 105
Msa0506110 MtrunA17_Chr2g0280011 31.646 158 102 2 3 155 7 163 6.47e-27 100
Msa0506110 MtrunA17_Chr3g0082701 37.255 153 93 2 4 155 325 475 9.09e-27 104
Msa0506110 MtrunA17_Chr2g0296651 34.839 155 89 2 1 151 292 438 1.18e-26 104
Msa0506110 MtrunA17_Chr4g0047691 32.051 156 103 1 3 158 315 467 1.23e-26 104
Msa0506110 MtrunA17_Chr2g0304871 36.232 138 87 1 18 155 329 465 1.42e-26 104
Msa0506110 MtrunA17_Chr6g0451641 33.553 152 100 1 4 155 317 467 2.57e-26 103
Msa0506110 MtrunA17_Chr4g0058231 32.450 151 99 1 3 153 301 448 2.70e-26 103
Msa0506110 MtrunA17_Chr8g0339311 32.258 155 105 0 4 158 322 476 3.10e-26 103
Msa0506110 MtrunA17_Chr4g0058211 28.481 158 110 1 1 158 16 170 4.15e-26 98.6
Msa0506110 MtrunA17_Chr3g0116741 30.968 155 104 1 1 155 313 464 4.46e-26 102
Msa0506110 MtrunA17_Chr8g0355961 37.195 164 91 2 4 158 307 467 4.89e-26 102
Msa0506110 MtrunA17_Chr6g0466941 35.294 153 97 2 4 155 317 468 5.09e-26 102
Msa0506110 MtrunA17_Chr2g0280061 33.750 160 96 4 3 155 7 163 5.56e-26 98.2
Msa0506110 MtrunA17_Chr6g0465511 35.616 146 91 1 10 155 308 450 5.91e-26 102
Msa0506110 MtrunA17_Chr6g0466331 35.616 146 91 1 10 155 308 450 6.40e-26 102
Msa0506110 MtrunA17_Chr4g0058281 32.215 149 98 1 10 158 320 465 9.19e-26 102
Msa0506110 MtrunA17_Chr8g0387101 33.333 159 99 3 3 155 300 457 9.90e-26 101
Msa0506110 MtrunA17_Chr1g0210091 32.680 153 99 2 6 155 336 487 1.22e-25 101
Msa0506110 MtrunA17_Chr1g0160861 33.117 154 100 1 3 156 138 288 1.30e-25 99.8
Msa0506110 MtrunA17_Chr3g0101631 34.247 146 93 1 10 155 303 445 1.35e-25 101
Msa0506110 MtrunA17_Chr2g0280081 33.113 151 95 2 10 155 807 956 2.45e-25 100
Msa0506110 MtrunA17_Chr2g0280081 31.646 158 102 2 3 155 299 455 2.24e-23 95.5
Msa0506110 MtrunA17_Chr1g0200961 35.065 154 97 1 3 156 297 447 2.45e-25 100
Msa0506110 MtrunA17_Chr4g0047641 30.128 156 106 1 3 158 316 468 3.04e-25 100
Msa0506110 MtrunA17_Chr5g0430081 33.974 156 95 3 3 155 301 451 3.12e-25 100
Msa0506110 MtrunA17_Chr6g0477081 42.857 112 64 0 3 114 130 241 3.27e-25 96.7
Msa0506110 MtrunA17_Chr6g0466901 35.333 150 95 2 4 152 316 464 3.87e-25 100
Msa0506110 MtrunA17_Chr5g0403351 32.026 153 101 1 3 155 303 452 4.92e-25 99.8
Msa0506110 MtrunA17_Chr1g0197871 33.939 165 96 3 3 158 296 456 5.26e-25 99.8
Msa0506110 MtrunA17_Chr8g0361471 34.932 146 92 1 10 155 308 450 5.98e-25 99.8
Msa0506110 MtrunA17_Chr5g0432751 32.026 153 103 1 6 158 306 457 9.87e-25 99.0
Msa0506110 MtrunA17_Chr6g0451781 34.694 147 95 1 9 155 362 507 1.19e-24 99.0
Msa0506110 MtrunA17_Chr1g0205361 32.468 154 101 1 3 156 297 447 1.21e-24 98.6
Msa0506110 MtrunA17_Chr5g0430101 31.169 154 102 2 3 155 300 450 1.21e-24 98.6
Msa0506110 MtrunA17_Chr1g0160851 32.468 154 101 1 3 156 297 447 1.56e-24 98.2
Msa0506110 MtrunA17_Chr3g0101701 33.987 153 98 1 3 155 305 454 1.84e-24 98.2
Msa0506110 MtrunA17_Chr4g0047631 30.769 156 105 1 3 158 312 464 1.88e-24 98.2
Msa0506110 MtrunA17_Chr2g0280121 31.013 158 103 2 3 155 305 461 2.07e-24 98.2
Msa0506110 MtrunA17_Chr1g0197891 33.333 165 97 3 3 158 296 456 2.08e-24 97.8
Msa0506110 MtrunA17_Chr1g0197851 33.333 165 97 3 3 158 296 456 2.19e-24 97.8
Msa0506110 MtrunA17_Chr1g0197881 33.333 165 97 3 3 158 295 455 2.32e-24 97.8
Msa0506110 MtrunA17_Chr5g0430071 29.221 154 105 2 3 155 156 306 2.41e-24 96.7
Msa0506110 MtrunA17_Chr4g0008101 34.932 146 94 1 10 155 330 474 2.76e-24 97.8
Msa0506110 MtrunA17_Chr5g0446151 33.758 157 100 2 1 157 300 452 3.25e-24 97.4
Msa0506110 MtrunA17_Chr6g0451741 34.247 146 95 1 10 155 352 496 3.34e-24 97.4
Msa0506110 MtrunA17_Chr4g0058191 28.846 156 108 1 3 158 290 442 3.36e-24 97.4
Msa0506110 MtrunA17_Chr1g0200951 32.051 156 103 3 3 155 325 480 4.58e-24 97.1
Msa0506110 MtrunA17_Chr7g0246131 35.948 153 95 1 3 155 304 453 7.49e-24 96.3
Msa0506110 MtrunA17_Chr3g0101601 32.877 146 96 1 10 155 303 446 7.57e-24 96.3
Msa0506110 MtrunA17_Chr5g0413911 30.769 156 104 2 3 155 326 480 9.71e-24 96.3
Msa0506110 MtrunA17_Chr5g0430031 29.870 154 104 2 3 155 303 453 1.09e-23 95.9
Msa0506110 MtrunA17_Chr5g0445441 30.263 152 103 1 1 152 339 487 1.55e-23 95.5
Msa0506110 MtrunA17_Chr8g0377341 31.169 154 102 2 3 155 328 478 1.62e-23 95.5
Msa0506110 MtrunA17_Chr5g0445451 29.677 155 106 1 1 155 298 449 2.21e-23 95.1
Msa0506110 MtrunA17_Chr8g0346261 29.299 157 108 3 1 155 341 496 2.26e-23 95.1
Msa0506110 MtrunA17_Chr4g0046701 40.000 110 65 1 46 155 1 109 2.55e-23 90.1
Msa0506110 MtrunA17_Chr5g0431501 29.530 149 102 1 4 152 303 448 3.09e-23 94.7
Msa0506110 MtrunA17_Chr5g0431461 29.530 149 102 1 4 152 303 448 3.09e-23 94.7
Msa0506110 MtrunA17_Chr3g0101711 34.932 146 92 1 10 155 311 453 3.17e-23 94.7
Msa0506110 MtrunA17_Chr3g0101731 31.507 146 97 1 10 155 308 450 3.19e-23 94.7
Msa0506110 MtrunA17_Chr3g0101621 32.877 146 96 1 10 155 297 440 3.38e-23 94.7
Msa0506110 MtrunA17_Chr5g0446161 31.847 157 103 2 1 157 299 451 3.41e-23 94.7
Msa0506110 MtrunA17_Chr1g0205371 35.714 154 96 1 3 156 298 448 3.56e-23 94.4
Msa0506110 MtrunA17_Chr8g0364651 29.032 155 108 1 3 155 295 449 4.49e-23 94.4
Msa0506110 MtrunA17_Chr5g0409051 29.677 155 108 1 3 156 307 461 5.01e-23 94.0
Msa0506110 MtrunA17_Chr2g0280071 30.464 151 99 2 10 155 339 488 5.12e-23 94.4
Msa0506110 MtrunA17_Chr5g0445461 31.613 155 103 1 1 155 298 449 5.15e-23 94.0
Msa0506110 MtrunA17_Chr5g0430091 31.210 157 104 2 3 158 303 456 8.27e-23 93.6
Msa0506110 MtrunA17_Chr5g0423621 33.835 133 85 1 20 152 1 130 1.18e-22 88.6
Msa0506110 MtrunA17_Chr7g0246181 36.601 153 94 1 3 155 302 451 1.26e-22 92.8
Msa0506110 MtrunA17_Chr3g0101611 30.968 155 104 1 1 155 301 452 1.32e-22 92.8
Msa0506110 MtrunA17_Chr3g0101671 32.192 146 96 1 10 155 312 454 1.69e-22 92.8
Msa0506110 MtrunA17_Chr5g0431641 32.075 159 101 2 1 155 294 449 4.07e-22 91.7
Msa0506110 MtrunA17_Chr5g0446101 30.769 156 104 2 1 156 112 263 4.76e-22 89.7
Msa0506110 MtrunA17_Chr2g0280041 31.126 151 98 2 10 155 338 487 4.98e-22 91.3
Msa0506110 MtrunA17_Chr5g0430111 30.400 125 86 1 3 126 303 427 5.20e-22 90.9
Msa0506110 MtrunA17_Chr5g0431671 31.373 153 102 1 3 155 301 450 5.48e-22 91.3
Msa0506110 MtrunA17_Chr5g0445421 29.032 155 107 1 1 155 351 502 5.56e-22 91.3
Msa0506110 MtrunA17_Chr1g0162811 34.247 146 92 2 10 155 308 449 6.43e-22 90.9
Msa0506110 MtrunA17_Chr6g0463621 29.252 147 102 2 10 155 7 152 7.50e-22 87.0
Msa0506110 MtrunA17_Chr3g0101661 30.719 153 103 1 3 155 304 453 1.06e-21 90.5
Msa0506110 MtrunA17_Chr3g0101591 30.986 142 95 1 14 155 49 187 1.28e-21 87.4
Msa0506110 MtrunA17_Chr4g0017411 32.667 150 93 1 6 155 289 430 1.42e-21 90.1
Msa0506110 MtrunA17_Chr5g0431511 30.201 149 101 1 4 152 303 448 1.87e-21 89.7
Msa0506110 MtrunA17_Chr3g0101651 32.192 146 96 1 10 155 312 454 2.62e-21 89.4
Msa0506110 MtrunA17_Chr6g0463791 30.612 147 100 2 10 155 303 448 2.95e-21 89.0
Msa0506110 MtrunA17_Chr7g0218611 33.553 152 97 2 4 155 302 449 9.01e-21 87.8
Msa0506110 MtrunA17_Chr5g0403321 28.859 149 103 1 7 155 310 455 1.85e-20 87.0
Msa0506110 MtrunA17_Chr5g0445531 29.032 155 107 1 1 155 297 448 1.96e-20 86.7
Msa0506110 MtrunA17_Chr3g0101721 29.452 146 100 1 10 155 310 452 2.11e-20 86.7
Msa0506110 MtrunA17_Chr4g0011901 30.921 152 102 1 1 152 294 442 2.61e-20 86.3
Msa0506110 MtrunA17_Chr1g0156101 29.605 152 104 1 4 155 312 460 2.79e-20 86.3
Msa0506110 MtrunA17_Chr3g0101811 29.452 146 100 1 10 155 323 465 3.88e-20 85.9
Msa0506110 MtrunA17_Chr4g0011851 27.632 152 107 1 4 155 16 164 4.34e-20 82.8
Msa0506110 MtrunA17_Chr5g0445381 28.387 155 108 1 1 155 329 480 6.76e-20 85.1
Msa0506110 MtrunA17_Chr4g0011921 31.884 138 91 1 18 155 311 445 6.99e-20 85.1
Msa0506110 MtrunA17_Chr4g0011941 28.947 152 105 1 4 155 1 149 8.19e-20 81.6
Msa0506110 MtrunA17_Chr4g0024771 28.387 155 108 1 1 155 298 449 8.23e-20 85.1
Msa0506110 MtrunA17_Chr5g0431591 28.105 153 107 1 3 155 118 267 8.75e-20 84.0
Msa0506110 MtrunA17_Chr5g0445761 32.468 154 101 1 4 157 1 151 1.22e-19 81.6
Msa0506110 MtrunA17_Chr3g0101691 29.412 153 105 1 3 155 305 454 2.17e-19 84.0
Msa0506110 MtrunA17_Chr4g0020041 28.767 146 101 1 10 155 309 451 2.32e-19 83.6
Msa0506110 MtrunA17_Chr5g0430151 31.452 124 81 2 35 157 6 126 4.06e-19 79.3
Msa0506110 MtrunA17_Chr7g0218601 32.895 152 96 3 4 155 303 448 1.03e-18 82.0
Msa0506110 MtrunA17_Chr3g0086681 35.345 116 72 2 41 155 4 117 1.13e-18 78.2
Msa0506110 MtrunA17_Chr4g0011961 28.289 152 106 1 1 152 293 441 1.19e-18 81.6
Msa0506110 MtrunA17_Chr4g0076161 29.032 155 107 2 3 155 299 452 1.81e-18 81.3
Msa0506110 MtrunA17_Chr1g0167321 32.877 146 95 1 10 155 307 449 2.94e-18 80.5
Msa0506110 MtrunA17_Chr3g0101581 28.767 146 101 1 10 155 309 451 5.42e-18 79.7
Msa0506110 MtrunA17_Chr2g0280261 29.032 155 107 1 1 155 292 443 9.35e-18 79.0
Msa0506110 MtrunA17_Chr5g0430041 32.258 124 76 3 35 155 6 124 1.62e-17 75.1
Msa0506110 MtrunA17_Chr5g0445351 32.258 124 81 1 32 155 52 172 1.73e-17 75.9
Msa0506110 MtrunA17_Chr3g0101741 28.767 146 96 2 10 155 235 372 2.56e-17 77.8
Msa0506110 MtrunA17_Chr5g0444981 33.099 142 91 2 10 151 17 154 3.18e-17 75.5
Msa0506110 MtrunA17_Chr3g0101571 28.767 146 101 2 10 155 306 448 3.88e-17 77.4
Msa0506110 MtrunA17_Chr8g0357431 32.192 146 96 1 10 155 309 451 3.94e-17 77.4
Msa0506110 MtrunA17_Chr5g0406651 29.605 152 104 1 4 155 298 446 4.79e-17 77.0
Msa0506110 MtrunA17_Chr5g0419691 28.261 138 96 1 18 155 311 445 6.40e-17 76.6
Msa0506110 MtrunA17_Chr3g0101821 30.405 148 100 1 10 157 308 452 7.60e-17 76.6
Msa0506110 MtrunA17_Chr1g0162801 31.447 159 102 2 1 155 297 452 8.15e-17 76.6
Msa0506110 MtrunA17_Chr3g0116731 33.663 101 60 1 55 155 1 94 2.11e-16 71.2
Msa0506110 MtrunA17_Chr3g0101751 30.822 146 98 1 10 155 315 457 2.13e-16 75.1
Msa0506110 MtrunA17_Chr3g0101801 30.137 146 99 1 10 155 315 457 2.17e-16 75.1
Msa0506110 MtrunA17_Chr3g0101761 31.507 146 97 1 10 155 308 450 2.28e-16 75.1
Msa0506110 MtrunA17_Chr0c19g0493771 29.936 157 99 4 4 156 453 602 5.65e-16 73.9
Msa0506110 MtrunA17_Chr8g0357421 31.507 146 97 1 10 155 308 450 5.67e-16 73.9
Msa0506110 MtrunA17_Chr3g0101831 29.452 146 100 1 10 155 309 451 6.07e-16 73.9
Msa0506110 MtrunA17_Chr4g0011981 26.974 152 108 1 1 152 294 442 6.20e-16 73.9
Msa0506110 MtrunA17_Chr8g0387001 30.818 159 96 4 4 151 300 455 9.06e-16 73.6
Msa0506110 MtrunA17_Chr1g0156061 28.947 152 105 1 4 155 268 416 1.35e-15 72.8
Msa0506110 MtrunA17_Chr1g0156081 28.947 152 105 1 4 155 336 484 1.40e-15 72.8
Msa0506110 MtrunA17_Chr4g0011881 28.758 153 106 1 3 155 296 445 2.44e-15 72.0
Msa0506110 MtrunA17_Chr4g0011871 26.812 138 98 1 18 155 312 446 2.64e-15 72.0
Msa0506110 MtrunA17_Chr4g0056981 45.714 70 38 0 30 99 1 70 3.72e-15 66.2
Msa0506110 MtrunA17_Chr8g0364631 33.929 112 66 2 51 155 347 457 5.41e-15 71.2
Msa0506110 MtrunA17_Chr8g0348751 28.931 159 101 4 4 151 303 460 8.49e-15 70.9
Msa0506110 MtrunA17_Chr8g0351401 29.375 160 98 4 4 151 303 459 1.09e-14 70.5
Msa0506110 MtrunA17_Chr5g0429651 29.560 159 101 3 4 151 300 458 1.14e-14 70.5
Msa0506110 MtrunA17_Chr4g0028321 39.744 78 45 1 78 155 31 106 1.55e-14 67.0
Msa0506110 MtrunA17_Chr4g0038271 28.750 160 99 4 4 151 354 510 1.19e-13 67.4
Msa0506110 MtrunA17_Chr2g0334021 30.612 147 87 5 10 151 311 447 1.63e-13 67.0
Msa0506110 MtrunA17_Chr3g0117301 29.703 101 68 1 55 155 1 98 2.15e-13 63.2
Msa0506110 MtrunA17_Chr3g0101541 32.353 102 66 1 54 155 3 101 3.23e-13 63.2
Msa0506110 MtrunA17_Chr7g0225531 24.841 157 111 4 1 151 306 461 6.14e-13 65.5
Msa0506110 MtrunA17_Chr1g0204271 27.381 168 100 6 1 151 293 455 9.08e-13 64.7
Msa0506110 MtrunA17_Chr3g0104351 27.329 161 104 3 4 151 306 466 1.09e-12 64.7
Msa0506110 MtrunA17_Chr7g0248991 29.508 122 76 3 4 121 235 350 1.55e-12 63.9
Msa0506110 MtrunA17_Chr5g0445371 32.258 93 60 1 63 155 90 179 1.88e-12 62.8
Msa0506110 MtrunA17_Chr8g0351311 27.273 165 104 4 1 151 299 461 2.60e-12 63.5
Msa0506110 MtrunA17_Chr3g0135841 31.250 144 91 5 13 151 344 484 6.74e-12 62.4
Msa0506110 MtrunA17_Chr1g0179811 27.703 148 105 2 4 151 344 489 9.71e-12 62.0
Msa0506110 MtrunA17_Chr6g0449381 28.105 153 103 3 4 151 305 455 1.30e-11 61.6
Msa0506110 MtrunA17_Chr1g0151221 29.167 144 94 5 13 151 336 476 1.40e-11 61.2
Msa0506110 MtrunA17_Chr1g0164321 27.160 162 102 3 4 151 338 497 1.49e-11 61.2
Msa0506110 MtrunA17_Chr1g0163421 28.472 144 96 4 13 151 349 490 1.50e-11 61.2
Msa0506110 MtrunA17_Chr1g0183611 30.323 155 97 5 4 151 225 375 1.71e-11 61.2
Msa0506110 MtrunA17_Chr8g0351391 26.667 165 105 4 1 151 298 460 2.05e-11 60.8
Msa0506110 MtrunA17_Chr1g0163451 28.472 144 96 4 13 151 333 474 6.64e-11 59.3
Msa0506110 MtrunA17_Chr1g0163351 28.758 153 102 4 4 151 305 455 8.46e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506110 AT2G22330.1 62.025 158 59 1 1 158 332 488 1.38e-68 217
Msa0506110 AT2G22330.2 62.025 158 59 1 1 158 355 511 1.64e-68 217
Msa0506110 AT4G39950.1 61.392 158 60 1 1 158 330 486 7.95e-68 215
Msa0506110 AT4G39950.2 61.392 158 60 1 1 158 370 526 2.24e-67 214
Msa0506110 AT5G05260.1 57.595 158 66 1 1 158 288 444 4.17e-66 209
Msa0506110 AT5G05260.2 58.333 156 64 1 3 158 322 476 1.20e-65 209
Msa0506110 AT1G16400.1 56.329 158 67 1 3 158 324 481 8.30e-64 204
Msa0506110 AT1G16410.1 55.696 158 68 1 3 158 325 482 1.96e-63 203
Msa0506110 AT1G79370.1 55.769 156 67 1 3 158 333 486 3.82e-62 200
Msa0506110 AT1G58260.1 55.556 162 65 2 2 158 315 474 2.17e-60 195
Msa0506110 AT1G01280.1 41.875 160 91 2 1 158 301 460 7.59e-41 143
Msa0506110 AT5G35917.1 48.413 126 50 1 3 128 326 436 8.46e-39 137
Msa0506110 AT1G28430.1 38.125 160 96 2 1 158 303 461 5.71e-36 130
Msa0506110 AT3G32047.1 39.216 153 92 1 3 155 306 457 7.42e-36 129
Msa0506110 AT2G40890.1 38.562 153 91 1 3 155 295 444 1.33e-35 129
Msa0506110 AT1G66540.2 39.073 151 84 1 1 151 122 264 6.30e-35 124
Msa0506110 AT1G66540.1 39.073 151 84 1 1 151 181 323 2.04e-34 124
Msa0506110 AT2G14100.1 36.601 153 96 1 3 155 308 459 2.55e-34 125
Msa0506110 AT2G27000.1 37.419 155 94 2 3 155 305 458 5.39e-34 125
Msa0506110 AT4G37340.1 39.073 151 84 1 1 151 294 436 5.95e-34 124
Msa0506110 AT5G07990.1 39.375 160 92 2 1 155 292 451 6.96e-34 124
Msa0506110 AT3G20120.2 35.625 160 90 3 3 155 170 323 8.65e-34 122
Msa0506110 AT3G20120.3 35.625 160 90 3 3 155 170 323 8.65e-34 122
Msa0506110 AT3G20120.1 35.625 160 90 3 3 155 170 323 8.65e-34 122
Msa0506110 AT4G37430.1 37.975 158 94 1 1 158 294 447 1.84e-33 123
Msa0506110 AT3G20130.2 36.196 163 96 3 3 158 279 440 2.80e-33 122
Msa0506110 AT3G20130.1 36.196 163 96 3 3 158 307 468 2.99e-33 122
Msa0506110 AT4G12300.1 35.484 155 98 1 1 155 308 460 3.81e-33 122
Msa0506110 AT3G20120.4 35.625 160 90 3 3 155 306 459 5.34e-33 122
Msa0506110 AT3G20950.1 37.086 151 92 2 3 151 311 460 8.52e-33 121
Msa0506110 AT5G35920.1 53.125 96 44 1 63 158 8 102 9.32e-33 114
Msa0506110 AT1G74540.1 37.500 152 92 2 4 155 289 437 9.61e-33 121
Msa0506110 AT3G20935.1 33.987 153 98 2 1 151 131 282 1.31e-32 119
Msa0506110 AT5G36220.2 35.484 155 92 1 4 158 157 303 1.53e-32 119
Msa0506110 AT4G37330.1 39.474 152 84 1 4 155 294 437 1.82e-32 120
Msa0506110 AT3G20140.1 37.908 153 92 2 3 155 307 456 2.29e-32 120
Msa0506110 AT3G28740.1 37.838 148 84 2 4 151 305 444 2.46e-32 120
Msa0506110 AT1G33730.1 37.908 153 92 1 3 155 171 320 2.95e-32 118
Msa0506110 AT1G33730.2 37.908 153 92 1 3 155 171 320 2.95e-32 118
Msa0506110 AT1G16410.2 55.556 90 40 0 3 92 325 414 3.44e-32 119
Msa0506110 AT1G74550.1 37.500 152 92 2 4 155 283 431 6.79e-32 119
Msa0506110 AT4G15330.2 35.484 155 99 1 1 155 273 426 1.37e-31 118
Msa0506110 AT4G22710.1 35.443 158 99 1 1 158 318 472 1.52e-31 118
Msa0506110 AT5G36220.1 35.484 155 92 1 4 158 303 449 1.61e-31 118
Msa0506110 AT4G15350.1 35.484 155 97 2 3 155 301 454 1.72e-31 118
Msa0506110 AT4G15330.1 35.484 155 99 1 1 155 301 454 1.92e-31 117
Msa0506110 AT4G22690.1 36.842 152 93 1 1 152 349 497 2.23e-31 118
Msa0506110 AT4G12320.1 34.194 155 100 1 1 155 310 462 2.43e-31 117
Msa0506110 AT4G37400.1 37.975 158 96 1 1 158 289 444 2.52e-31 117
Msa0506110 AT3G20100.1 34.969 163 98 3 3 158 307 468 2.54e-31 117
Msa0506110 AT5G47990.1 36.250 160 94 4 3 158 308 463 3.94e-31 117
Msa0506110 AT2G45550.1 35.948 153 95 1 3 155 307 456 4.49e-31 117
Msa0506110 AT3G61040.1 38.854 157 92 2 3 158 295 448 5.05e-31 116
Msa0506110 AT4G36220.1 37.255 153 93 2 3 155 315 464 5.18e-31 117
Msa0506110 AT4G37410.1 34.375 160 97 2 1 158 291 444 5.49e-31 116
Msa0506110 AT4G37360.1 36.424 151 88 1 1 151 294 436 7.78e-31 116
Msa0506110 AT3G20080.4 34.356 163 99 3 3 158 171 332 8.36e-31 114
Msa0506110 AT3G20080.5 34.356 163 99 3 3 158 171 332 8.36e-31 114
Msa0506110 AT3G20080.6 34.356 163 99 3 3 158 171 332 8.36e-31 114
Msa0506110 AT3G20080.3 34.356 163 99 3 3 158 171 332 8.36e-31 114
Msa0506110 AT2G45570.1 37.908 153 92 1 3 155 308 457 1.15e-30 115
Msa0506110 AT4G37320.1 37.500 152 87 1 4 155 297 440 1.44e-30 115
Msa0506110 AT5G42580.1 34.810 158 94 3 3 155 292 445 1.87e-30 115
Msa0506110 AT5G57220.1 36.076 158 93 1 1 158 289 438 2.75e-30 114
Msa0506110 AT3G20080.2 34.356 163 99 3 3 158 308 469 2.88e-30 114
Msa0506110 AT3G20080.1 34.356 163 99 3 3 158 308 469 2.88e-30 114
Msa0506110 AT1G50560.1 34.839 155 98 2 3 155 311 464 7.28e-30 113
Msa0506110 AT3G20090.1 35.714 154 97 2 3 155 171 323 9.59e-30 112
Msa0506110 AT3G25180.1 37.500 152 92 1 4 155 310 458 1.23e-29 113
Msa0506110 AT4G12310.1 32.903 155 102 1 1 155 312 464 1.46e-29 112
Msa0506110 AT3G20110.1 34.161 161 95 3 3 158 304 458 1.54e-29 112
Msa0506110 AT1G01190.2 34.591 159 102 2 1 157 331 489 2.72e-29 112
Msa0506110 AT1G01190.1 34.591 159 102 2 1 157 326 484 2.80e-29 112
Msa0506110 AT2G23190.1 36.184 152 89 2 4 155 341 484 2.87e-29 112
Msa0506110 AT1G50520.1 35.443 158 93 3 3 155 310 463 3.41e-29 112
Msa0506110 AT1G33720.2 35.714 154 96 1 2 155 199 349 3.45e-29 110
Msa0506110 AT3G20940.1 33.113 151 98 2 3 151 308 457 3.69e-29 111
Msa0506110 AT5G04330.1 37.662 154 92 3 3 155 303 453 3.95e-29 111
Msa0506110 AT1G33720.4 35.948 153 95 1 3 155 175 324 3.97e-29 110
Msa0506110 AT1G33720.3 35.948 153 95 1 3 155 175 324 3.97e-29 110
Msa0506110 AT1G33720.5 35.948 153 95 1 3 155 175 324 3.97e-29 110
Msa0506110 AT3G20090.2 35.714 154 97 2 3 155 309 461 4.90e-29 111
Msa0506110 AT3G20960.1 35.484 155 98 2 3 156 204 357 6.75e-29 110
Msa0506110 AT4G37370.1 35.762 151 89 1 1 151 293 435 6.91e-29 110
Msa0506110 AT4G15380.1 31.515 165 105 3 1 158 301 464 8.95e-29 110
Msa0506110 AT1G33720.1 35.948 153 95 1 3 155 307 456 1.78e-28 109
Msa0506110 AT4G15360.1 35.220 159 91 3 3 156 307 458 1.99e-28 109
Msa0506110 AT1G64930.1 34.416 154 100 1 3 155 307 460 2.24e-28 109
Msa0506110 AT3G20960.2 35.484 155 98 2 3 156 307 460 2.36e-28 109
Msa0506110 AT4G31940.1 30.968 155 107 0 4 158 318 472 3.39e-28 108
Msa0506110 AT2G23220.1 34.839 155 93 2 4 158 312 458 4.46e-28 108
Msa0506110 AT2G45560.1 33.333 153 99 1 3 155 307 456 8.23e-28 107
Msa0506110 AT5G04660.1 34.228 149 94 2 10 156 317 463 1.42e-27 107
Msa0506110 AT1G64940.1 35.714 154 96 3 3 155 309 460 1.53e-27 107
Msa0506110 AT2G27010.1 32.258 155 102 2 3 155 283 436 2.22e-27 106
Msa0506110 AT2G45580.2 33.333 153 98 3 3 155 155 303 2.72e-27 105
Msa0506110 AT2G45580.1 33.333 153 98 3 3 155 309 457 8.22e-27 105
Msa0506110 AT2G46660.1 33.121 157 103 2 3 157 326 482 9.64e-27 105
Msa0506110 AT5G04630.1 35.762 151 95 2 3 152 307 456 1.06e-26 104
Msa0506110 AT3G61880.1 33.121 157 103 2 3 157 326 482 1.11e-26 104
Msa0506110 AT3G61880.2 33.121 157 103 2 3 157 326 482 1.47e-26 104
Msa0506110 AT3G48310.1 33.775 151 96 2 3 152 288 435 1.86e-26 103
Msa0506110 AT2G42250.1 30.488 164 102 3 3 158 306 465 1.86e-26 104
Msa0506110 AT5G35715.1 33.750 160 100 3 1 158 233 388 1.91e-26 103
Msa0506110 AT2G30490.1 32.680 153 102 1 6 158 305 456 3.06e-26 103
Msa0506110 AT5G44620.1 30.247 162 102 2 1 158 312 466 4.77e-26 103
Msa0506110 AT1G74110.1 33.974 156 100 3 3 155 335 490 4.93e-26 103
Msa0506110 AT4G37310.1 31.515 165 102 4 1 158 295 455 6.15e-26 102
Msa0506110 AT4G31950.1 31.081 148 102 0 4 151 306 453 9.02e-26 102
Msa0506110 AT4G12330.1 31.013 158 106 2 1 158 311 465 9.13e-26 102
Msa0506110 AT5G06900.1 35.211 142 86 3 10 151 307 442 1.93e-25 101
Msa0506110 AT3G26270.1 32.237 152 99 2 2 152 300 448 1.94e-25 101
Msa0506110 AT3G26210.1 28.846 156 107 2 1 155 297 449 6.25e-25 99.8
Msa0506110 AT3G48270.1 32.667 150 97 2 10 158 294 440 7.18e-25 99.8
Msa0506110 AT5G67310.1 31.613 155 98 1 4 158 308 454 1.18e-24 99.0
Msa0506110 AT3G10560.1 33.974 156 100 3 3 157 312 465 1.27e-24 99.0
Msa0506110 AT5G06905.1 29.762 168 105 3 3 158 297 463 1.58e-24 99.0
Msa0506110 AT1G11600.1 36.129 155 97 2 3 155 307 461 2.47e-24 98.2
Msa0506110 AT3G10570.1 31.973 147 99 1 10 156 319 464 2.64e-24 98.2
Msa0506110 AT2G25160.1 32.468 154 101 2 4 155 312 464 3.92e-24 97.8
Msa0506110 AT3G48300.1 36.364 154 83 4 7 152 286 432 5.39e-24 97.1
Msa0506110 AT3G48300.2 36.364 154 83 4 7 152 288 434 5.43e-24 97.1
Msa0506110 AT4G31970.1 28.387 155 111 0 4 158 317 471 5.57e-24 97.4
Msa0506110 AT3G26160.1 30.769 156 104 2 1 155 298 450 6.20e-24 97.1
Msa0506110 AT3G03470.1 33.333 159 100 3 3 155 302 460 9.17e-24 96.7
Msa0506110 AT1G13100.1 28.931 159 109 2 1 158 294 449 1.85e-23 95.5
Msa0506110 AT1G13110.1 29.114 158 108 2 1 157 300 454 2.07e-23 95.5
Msa0506110 AT3G52970.1 35.616 146 89 4 16 158 322 465 2.87e-23 95.1
Msa0506110 AT3G52970.2 35.616 146 89 4 16 158 336 479 3.08e-23 95.1
Msa0506110 AT1G13090.2 28.931 159 109 2 1 158 294 449 3.09e-23 95.1
Msa0506110 AT3G26320.1 28.387 155 108 1 4 158 298 449 3.25e-23 95.1
Msa0506110 AT3G26180.2 30.769 156 104 2 1 155 164 316 3.43e-23 94.0
Msa0506110 AT3G53300.1 34.375 160 99 3 1 158 295 450 6.12e-23 94.4
Msa0506110 AT5G25140.1 28.205 156 109 1 3 158 293 445 9.47e-23 93.6
Msa0506110 AT3G48280.1 32.639 144 93 2 10 152 294 434 1.10e-22 93.6
Msa0506110 AT3G26180.1 30.769 156 104 2 1 155 298 450 1.26e-22 93.6
Msa0506110 AT3G26230.1 29.936 157 105 2 1 155 295 448 1.29e-22 93.2
Msa0506110 AT3G26330.1 28.387 155 108 1 4 158 298 449 1.40e-22 93.2
Msa0506110 AT3G26310.1 28.846 156 108 1 3 158 296 448 2.06e-22 92.8
Msa0506110 AT3G48290.2 28.302 159 110 2 1 158 313 468 4.75e-22 91.7
Msa0506110 AT3G26830.1 26.415 159 113 2 1 158 294 449 4.90e-22 91.7
Msa0506110 AT4G13310.1 30.573 157 105 2 3 158 296 449 5.45e-22 91.7
Msa0506110 AT3G48290.1 29.801 151 102 2 9 158 295 442 6.87e-22 91.3
Msa0506110 AT5G25120.1 28.289 152 106 1 7 158 297 445 8.62e-22 90.9
Msa0506110 AT2G24180.1 29.412 153 105 1 3 155 303 452 9.29e-22 90.9
Msa0506110 AT1G13080.2 29.801 151 102 2 3 152 182 329 9.38e-22 90.1
Msa0506110 AT2G05180.1 30.822 146 86 3 3 143 307 442 1.01e-21 90.5
Msa0506110 AT3G26170.1 30.128 156 105 2 1 155 298 450 1.06e-21 90.9
Msa0506110 AT3G26150.1 31.250 160 104 3 1 158 298 453 1.34e-21 90.5
Msa0506110 AT1G13710.1 30.968 155 102 3 3 155 314 465 1.87e-21 90.1
Msa0506110 AT5G10600.1 32.215 149 96 1 10 158 318 461 1.94e-21 90.1
Msa0506110 AT1G13080.1 29.801 151 102 2 3 152 300 447 1.95e-21 90.1
Msa0506110 AT5G25180.1 27.742 155 109 1 4 158 294 445 2.73e-21 89.7
Msa0506110 AT2G12190.1 32.653 147 98 1 10 155 315 461 2.80e-21 89.7
Msa0506110 AT3G26300.1 27.848 158 111 1 1 158 295 449 2.92e-21 89.4
Msa0506110 AT5G25130.1 27.632 152 107 1 7 158 297 445 4.20e-21 89.0
Msa0506110 AT1G64950.1 33.333 147 95 3 10 155 315 459 5.46e-21 89.0
Msa0506110 AT3G48320.1 33.775 151 96 2 3 152 288 435 5.79e-21 88.6
Msa0506110 AT3G44250.1 34.375 160 99 3 1 158 294 449 6.90e-21 88.6
Msa0506110 AT3G26280.1 28.477 151 103 2 7 155 305 452 1.26e-20 87.8
Msa0506110 AT3G26280.2 28.477 151 103 2 7 155 322 469 1.33e-20 87.8
Msa0506110 AT5G57260.1 27.389 157 108 2 4 157 298 451 2.37e-20 87.0
Msa0506110 AT4G13290.1 29.299 157 107 2 3 158 289 442 2.87e-20 86.7
Msa0506110 AT5G10610.1 30.872 149 98 1 10 158 302 445 6.26e-20 85.9
Msa0506110 AT1G11610.1 30.968 155 102 3 3 155 294 445 9.01e-20 85.1
Msa0506110 AT1G11610.2 30.968 155 102 3 3 155 294 445 1.05e-19 85.1
Msa0506110 AT3G53280.1 33.333 159 102 2 1 158 293 448 1.22e-19 84.7
Msa0506110 AT3G26190.1 30.818 159 106 2 1 158 295 450 2.66e-19 84.0
Msa0506110 AT4G31500.1 28.571 147 103 2 10 155 302 447 4.33e-19 83.2
Msa0506110 AT2G30750.1 30.323 155 103 3 3 155 294 445 4.90e-19 83.2
Msa0506110 AT3G26200.1 30.189 159 107 2 1 158 295 450 5.58e-19 83.2
Msa0506110 AT2G30770.1 29.032 155 105 3 3 155 294 445 6.88e-19 82.8
Msa0506110 AT3G26290.1 31.613 155 103 2 4 158 298 449 7.54e-19 82.8
Msa0506110 AT4G13770.1 27.044 159 110 3 3 158 296 451 7.70e-19 82.8
Msa0506110 AT3G26290.2 31.613 155 103 2 4 158 311 462 7.95e-19 82.8
Msa0506110 AT5G09970.1 30.573 157 103 4 3 155 333 487 9.75e-19 82.4
Msa0506110 AT1G64900.1 33.333 141 93 1 16 155 315 455 3.55e-18 80.9
Msa0506110 AT3G26220.1 29.936 157 105 2 1 155 298 451 6.19e-18 80.1
Msa0506110 AT3G61040.2 40.206 97 57 1 3 98 295 391 1.42e-16 75.9
Msa0506110 AT1G58265.1 45.588 68 34 1 94 158 12 79 2.65e-16 72.0
Msa0506110 AT4G20240.1 30.159 126 82 3 1 123 293 415 2.96e-16 75.1
Msa0506110 AT5G42590.1 28.025 157 109 2 3 158 295 448 6.53e-16 74.3
Msa0506110 AT5G61320.1 37.500 96 60 0 57 152 341 436 1.37e-15 73.2
Msa0506110 AT5G58860.1 27.673 159 104 2 4 151 300 458 1.68e-14 70.1
Msa0506110 AT2G02580.1 26.452 155 111 1 4 158 298 449 1.84e-14 70.1
Msa0506110 AT5G25900.1 26.415 159 103 4 3 156 312 461 5.50e-14 68.6
Msa0506110 AT2G45580.3 32.990 97 64 1 3 99 309 404 1.04e-13 67.8
Msa0506110 AT5G24950.1 25.658 152 108 3 3 152 294 442 1.08e-13 67.8
Msa0506110 AT3G53290.1 34.483 116 72 2 43 158 246 357 3.21e-13 66.2
Msa0506110 AT1G63710.1 30.189 159 97 3 4 151 302 457 6.20e-13 65.9
Msa0506110 AT5G24960.1 28.947 152 103 3 3 152 295 443 7.28e-13 65.5
Msa0506110 AT4G00360.1 25.786 159 106 3 4 151 304 461 2.92e-12 63.9
Msa0506110 AT4G39500.2 25.309 162 114 3 1 157 313 472 2.94e-12 63.9
Msa0506110 AT4G39500.1 25.309 162 114 3 1 157 263 422 2.98e-12 63.5
Msa0506110 AT3G53130.1 26.351 148 107 2 4 151 344 489 3.55e-12 63.5
Msa0506110 AT2G27690.1 27.044 159 106 5 1 151 285 441 9.56e-12 62.4
Msa0506110 AT2G44890.1 27.044 159 102 4 4 151 302 457 1.87e-11 61.6
Msa0506110 AT3G25180.2 43.284 67 38 0 4 70 310 376 1.91e-11 61.2
Msa0506110 AT1G01600.1 26.087 161 104 4 4 151 305 463 7.02e-11 59.7

Find 40 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGATATGAACTTCAATTT+TGG 0.181950 3_4:+52324904 None:intergenic
GAAATTGAGTTTAGGAATAT+CGG 0.287102 3_4:+52325158 None:intergenic
GGAGCATTGAAATCGGTTAT+TGG 0.287181 3_4:+52325099 None:intergenic
GTTTAGGAATATCGGATTCT+TGG 0.312112 3_4:+52325166 None:intergenic
CGTTCTGGTTTGTATTTGTA+AGG 0.332396 3_4:+52324967 None:intergenic
GTCCATTCAACTGTGTTTGA+TGG 0.334166 3_4:+52325273 None:intergenic
TCCTAAACTCAATTTCTTGA+AGG 0.361318 3_4:-52325151 Msa0506110:CDS
CATGTATTGCTTGGAAGAAC+TGG 0.412360 3_4:-52325021 Msa0506110:CDS
GCCTTCAAGAAATTGAGTTT+AGG 0.412511 3_4:+52325150 None:intergenic
TCATTCTTAAGATGGCGTTC+TGG 0.419545 3_4:+52324952 None:intergenic
GAAGAATTGGACAATATAGT+TGG 0.442349 3_4:-52325204 Msa0506110:CDS
TTGCTTGGAAGAACTGGTCT+TGG 0.446617 3_4:-52325015 Msa0506110:CDS
GGCTGTCCTGGTATCATGCT+TGG 0.461036 3_4:-52324865 Msa0506110:CDS
ACAATATAGTTGGAAAAGAT+AGG 0.465679 3_4:-52325194 Msa0506110:CDS
ATCCATCAAACACAGTTGAA+TGG 0.469179 3_4:-52325275 Msa0506110:CDS
AGCAATACATGACTTCCCTT+TGG 0.470218 3_4:+52325033 None:intergenic
GGAAATTACTTCATACCAAA+GGG 0.475466 3_4:-52325048 Msa0506110:CDS
TCTATAAATGATACAATGGT+TGG 0.482958 3_4:-52325069 Msa0506110:CDS
ACAGGAAGGCGTGGCTGTCC+TGG 0.484218 3_4:-52324877 Msa0506110:CDS
TGCTTGGAAGAACTGGTCTT+GGG 0.487569 3_4:-52325014 Msa0506110:CDS
CCGAACCATCATTCTTAAGA+TGG 0.493621 3_4:+52324944 None:intergenic
CCATCTTAAGAATGATGGTT+CGG 0.495334 3_4:-52324944 Msa0506110:CDS
TTCTATGAAGGAATTGATGT+TGG 0.502153 3_4:-52325310 None:intergenic
AAGGGAAGTCATGTATTGCT+TGG 0.510842 3_4:-52325030 Msa0506110:CDS
CATTGAAATCGGTTATTGGA+TGG 0.517983 3_4:+52325103 None:intergenic
GCCACGCCTTCCTGTACTAA+AGG 0.520091 3_4:+52324885 None:intergenic
GACATGGGGAGCATTGAAAT+CGG 0.524926 3_4:+52325092 None:intergenic
AAGTTCATATCCTTTAGTAC+AGG 0.529485 3_4:-52324895 Msa0506110:CDS
GAACGCCATCTTAAGAATGA+TGG 0.531219 3_4:-52324949 Msa0506110:CDS
TGGAAATTACTTCATACCAA+AGG 0.531613 3_4:-52325049 Msa0506110:CDS
TGTATCATTTATAGAGACAT+GGG 0.548159 3_4:+52325077 None:intergenic
TTGTATCATTTATAGAGACA+TGG 0.568480 3_4:+52325076 None:intergenic
TATAGTTGGAAAAGATAGGA+TGG 0.588175 3_4:-52325190 Msa0506110:CDS
TCCTTTAGTACAGGAAGGCG+TGG 0.599257 3_4:-52324886 Msa0506110:CDS
TGTCTCTATAAATGATACAA+TGG 0.599430 3_4:-52325073 Msa0506110:CDS
TGAAATCGGTTATTGGATGG+AGG 0.605859 3_4:+52325106 None:intergenic
TCATATCCTTTAGTACAGGA+AGG 0.608298 3_4:-52324891 Msa0506110:CDS
AAACACAGTTGAATGGACAT+TGG 0.637511 3_4:-52325268 Msa0506110:CDS
GTAGAACCAAGCATGATACC+AGG 0.662662 3_4:+52324859 None:intergenic
GTATCATTTATAGAGACATG+GGG 0.685452 3_4:+52325078 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAAAAAGTCATAGAAGAAT+TGG - chr3_4:52324941-52324960 Msa0506110:CDS 25.0%
! ACAATATAGTTGGAAAAGAT+AGG - chr3_4:52324964-52324983 Msa0506110:CDS 25.0%
! GAAATTGAGTTTAGGAATAT+CGG + chr3_4:52325003-52325022 None:intergenic 25.0%
! TGTATCATTTATAGAGACAT+GGG + chr3_4:52325084-52325103 None:intergenic 25.0%
! TTGTATCATTTATAGAGACA+TGG + chr3_4:52325085-52325104 None:intergenic 25.0%
! TGTCTCTATAAATGATACAA+TGG - chr3_4:52325085-52325104 Msa0506110:CDS 25.0%
! TCTATAAATGATACAATGGT+TGG - chr3_4:52325089-52325108 Msa0506110:CDS 25.0%
!! TAAGGTTCATTCCAAATTTT+TGG + chr3_4:52325176-52325195 None:intergenic 25.0%
!! AAGGATATGAACTTCAATTT+TGG + chr3_4:52325257-52325276 None:intergenic 25.0%
!!! ATGACTTTTTCAAAGAGTTC+AGG + chr3_4:52324933-52324952 None:intergenic 30.0%
GAAGAATTGGACAATATAGT+TGG - chr3_4:52324954-52324973 Msa0506110:CDS 30.0%
TATAGTTGGAAAAGATAGGA+TGG - chr3_4:52324968-52324987 Msa0506110:CDS 30.0%
TCCTAAACTCAATTTCTTGA+AGG - chr3_4:52325007-52325026 Msa0506110:CDS 30.0%
GTATCATTTATAGAGACATG+GGG + chr3_4:52325083-52325102 None:intergenic 30.0%
TGGAAATTACTTCATACCAA+AGG - chr3_4:52325109-52325128 Msa0506110:CDS 30.0%
GGAAATTACTTCATACCAAA+GGG - chr3_4:52325110-52325129 Msa0506110:CDS 30.0%
TTGGGAGAAATCCAAAAATT+TGG - chr3_4:52325162-52325181 Msa0506110:CDS 30.0%
AAGTTCATATCCTTTAGTAC+AGG - chr3_4:52325263-52325282 Msa0506110:CDS 30.0%
ATCCATCAAACACAGTTGAA+TGG - chr3_4:52324883-52324902 Msa0506110:CDS 35.0%
AAACACAGTTGAATGGACAT+TGG - chr3_4:52324890-52324909 Msa0506110:CDS 35.0%
GTTTAGGAATATCGGATTCT+TGG + chr3_4:52324995-52325014 None:intergenic 35.0%
GCCTTCAAGAAATTGAGTTT+AGG + chr3_4:52325011-52325030 None:intergenic 35.0%
CATTGAAATCGGTTATTGGA+TGG + chr3_4:52325058-52325077 None:intergenic 35.0%
!! CGTTCTGGTTTGTATTTGTA+AGG + chr3_4:52325194-52325213 None:intergenic 35.0%
CCATCTTAAGAATGATGGTT+CGG - chr3_4:52325214-52325233 Msa0506110:CDS 35.0%
TCATATCCTTTAGTACAGGA+AGG - chr3_4:52325267-52325286 Msa0506110:CDS 35.0%
GTCCATTCAACTGTGTTTGA+TGG + chr3_4:52324888-52324907 None:intergenic 40.0%
TGAAATCGGTTATTGGATGG+AGG + chr3_4:52325055-52325074 None:intergenic 40.0%
!! GGAGCATTGAAATCGGTTAT+TGG + chr3_4:52325062-52325081 None:intergenic 40.0%
AGCAATACATGACTTCCCTT+TGG + chr3_4:52325128-52325147 None:intergenic 40.0%
AAGGGAAGTCATGTATTGCT+TGG - chr3_4:52325128-52325147 Msa0506110:CDS 40.0%
CATGTATTGCTTGGAAGAAC+TGG - chr3_4:52325137-52325156 Msa0506110:CDS 40.0%
TCATTCTTAAGATGGCGTTC+TGG + chr3_4:52325209-52325228 None:intergenic 40.0%
GAACGCCATCTTAAGAATGA+TGG - chr3_4:52325209-52325228 Msa0506110:CDS 40.0%
CCGAACCATCATTCTTAAGA+TGG + chr3_4:52325217-52325236 None:intergenic 40.0%
!! GACATGGGGAGCATTGAAAT+CGG + chr3_4:52325069-52325088 None:intergenic 45.0%
! TTGCTTGGAAGAACTGGTCT+TGG - chr3_4:52325143-52325162 Msa0506110:CDS 45.0%
!! TGCTTGGAAGAACTGGTCTT+GGG - chr3_4:52325144-52325163 Msa0506110:CDS 45.0%
GTAGAACCAAGCATGATACC+AGG + chr3_4:52325302-52325321 None:intergenic 45.0%
TCCTTTAGTACAGGAAGGCG+TGG - chr3_4:52325272-52325291 Msa0506110:CDS 50.0%
GCCACGCCTTCCTGTACTAA+AGG + chr3_4:52325276-52325295 None:intergenic 55.0%
GGCTGTCCTGGTATCATGCT+TGG - chr3_4:52325293-52325312 Msa0506110:CDS 55.0%
! ACAGGAAGGCGTGGCTGTCC+TGG - chr3_4:52325281-52325300 Msa0506110:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 52324852 52325328 52324852 ID=Msa0506110;Name=Msa0506110
chr3_4 mRNA 52324852 52325328 52324852 ID=Msa0506110-mRNA-1;Parent=Msa0506110;Name=Msa0506110-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|158
chr3_4 exon 52324852 52325328 52324852 ID=Msa0506110-mRNA-1:exon:11413;Parent=Msa0506110-mRNA-1
chr3_4 CDS 52324852 52325328 52324852 ID=Msa0506110-mRNA-1:cds;Parent=Msa0506110-mRNA-1
Gene Sequence

>Msa0506110

ATGAAGGAATTGATGTTGGCATTCGTAGACAATCCATCAAACACAGTTGAATGGACATTGGCTGAAATGTTAAATCAACCTGAACTCTTTGAAAAAGTCATAGAAGAATTGGACAATATAGTTGGAAAAGATAGGATGGTCCAAGAATCCGATATTCCTAAACTCAATTTCTTGAAGGCTTGTGCAAGAGAAGCGTTTCGCCTCCATCCAATAACCGATTTCAATGCTCCCCATGTCTCTATAAATGATACAATGGTTGGAAATTACTTCATACCAAAGGGAAGTCATGTATTGCTTGGAAGAACTGGTCTTGGGAGAAATCCAAAAATTTGGAATGAACCTTACAAATACAAACCAGAACGCCATCTTAAGAATGATGGTTCGGATATAGCGTTGACAGAGCCAAAATTGAAGTTCATATCCTTTAGTACAGGAAGGCGTGGCTGTCCTGGTATCATGCTTGGTTCTACAATATAA
Protein sequence

>Msa0506110

MKELMLAFVDNPSNTVEWTLAEMLNQPELFEKVIEELDNIVGKDRMVQESDIPKLNFLKACAREAFRLHPITDFNAPHVSINDTMVGNYFIPKGSHVLLGRTGLGRNPKIWNEPYKYKPERHLKNDGSDIALTEPKLKFISFSTGRRGCPGIMLGSTI*