AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0366560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366560 MtrunA17_Chr3g0107541 90.909 154 14 0 1 154 327 480 5.71e-102 302
Msa0366560 MtrunA17_Chr3g0107551 86.364 154 21 0 1 154 6 159 3.38e-99 284
Msa0366560 MtrunA17_Chr3g0105761 72.078 154 41 1 1 154 1 152 1.18e-81 239
Msa0366560 MtrunA17_Chr3g0107611 67.532 154 50 0 1 154 332 485 1.30e-76 237
Msa0366560 MtrunA17_Chr8g0370641 65.584 154 53 0 1 154 320 473 5.81e-73 227
Msa0366560 MtrunA17_Chr8g0370651 64.706 153 54 0 2 154 325 477 1.23e-71 224
Msa0366560 MtrunA17_Chr8g0372591 66.429 140 46 1 2 140 5 144 1.20e-66 199
Msa0366560 MtrunA17_Chr8g0371761 53.472 144 56 1 19 151 1 144 4.54e-52 162
Msa0366560 MtrunA17_Chr7g0254641 41.830 153 88 1 3 154 314 466 2.34e-39 139
Msa0366560 MtrunA17_Chr2g0310351 37.662 154 93 1 1 154 2 152 9.02e-39 130
Msa0366560 MtrunA17_Chr3g0086651 41.333 150 87 1 3 151 306 455 2.07e-36 130
Msa0366560 MtrunA17_Chr3g0086661 42.000 150 86 1 3 151 306 455 4.23e-36 130
Msa0366560 MtrunA17_Chr2g0310391 37.013 154 94 1 1 154 295 445 1.04e-35 129
Msa0366560 MtrunA17_Chr8g0344151 40.268 149 86 1 6 154 311 456 2.11e-35 128
Msa0366560 MtrunA17_Chr4g0046681 37.162 148 92 1 1 148 32 178 2.18e-35 122
Msa0366560 MtrunA17_Chr2g0310381 37.013 154 94 1 1 154 295 445 2.21e-35 127
Msa0366560 MtrunA17_Chr3g0094171 39.597 149 90 0 3 151 310 458 3.00e-35 127
Msa0366560 MtrunA17_Chr8g0382901 38.000 150 90 1 5 154 281 427 1.45e-34 127
Msa0366560 MtrunA17_Chr8g0382901 37.333 150 91 1 5 154 760 906 1.07e-33 124
Msa0366560 MtrunA17_Chr8g0344181 38.255 149 89 1 6 154 313 458 1.87e-33 122
Msa0366560 MtrunA17_Chr4g0053621 37.500 152 87 1 1 152 304 447 3.99e-33 122
Msa0366560 MtrunA17_Chr1g0174431 38.411 151 88 2 5 151 6 155 6.03e-33 115
Msa0366560 MtrunA17_Chr1g0174441 38.667 150 90 2 2 151 331 478 9.20e-33 121
Msa0366560 MtrunA17_Chr7g0224551 39.355 155 84 3 3 151 301 451 1.49e-32 120
Msa0366560 MtrunA17_Chr4g0046351 36.774 155 93 2 3 153 304 457 1.76e-32 120
Msa0366560 MtrunA17_Chr4g0046331 36.306 157 93 2 3 153 304 459 4.63e-32 119
Msa0366560 MtrunA17_Chr3g0094231 36.184 152 97 0 3 154 303 454 5.05e-32 119
Msa0366560 MtrunA17_Chr8g0372331 60.256 78 31 0 77 154 1 78 5.45e-32 110
Msa0366560 MtrunA17_Chr4g0061381 37.333 150 93 1 3 151 303 452 5.77e-32 119
Msa0366560 MtrunA17_Chr4g0056951 40.411 146 84 2 6 151 318 460 7.83e-32 118
Msa0366560 MtrunA17_Chr1g0213671 37.762 143 87 1 12 154 319 459 8.01e-32 118
Msa0366560 MtrunA17_Chr7g0255531 36.242 149 92 1 3 151 300 445 1.20e-31 117
Msa0366560 MtrunA17_Chr3g0086691 36.842 152 95 1 1 151 304 455 1.75e-31 117
Msa0366560 MtrunA17_Chr7g0224561 38.065 155 86 3 3 151 301 451 2.67e-31 117
Msa0366560 MtrunA17_Chr4g0046321 35.484 155 95 2 3 153 304 457 2.76e-31 117
Msa0366560 MtrunA17_Chr6g0458561 36.842 152 95 1 1 152 329 479 2.84e-31 117
Msa0366560 MtrunA17_Chr4g0057001 41.722 151 85 2 1 151 318 465 4.44e-31 116
Msa0366560 MtrunA17_Chr8g0372251 37.838 148 89 2 1 148 307 451 5.25e-31 116
Msa0366560 MtrunA17_Chr2g0314721 38.272 162 88 2 2 154 311 469 6.82e-31 115
Msa0366560 MtrunA17_Chr2g0314731 37.654 162 89 2 2 154 300 458 1.42e-30 114
Msa0366560 MtrunA17_Chr8g0344191 37.584 149 91 2 6 154 344 490 1.62e-30 115
Msa0366560 MtrunA17_Chr1g0174451 36.000 150 94 2 2 151 310 457 2.42e-30 114
Msa0366560 MtrunA17_Chr5g0405001 38.411 151 90 2 1 151 315 462 2.59e-30 114
Msa0366560 MtrunA17_Chr4g0052861 37.415 147 84 1 1 147 300 438 2.82e-30 114
Msa0366560 MtrunA17_Chr8g0362701 34.000 150 98 1 2 151 308 456 2.86e-30 114
Msa0366560 MtrunA17_Chr1g0174461 38.356 146 88 2 2 147 309 452 3.26e-30 114
Msa0366560 MtrunA17_Chr1g0164211 38.667 150 89 1 2 151 297 443 3.33e-30 114
Msa0366560 MtrunA17_Chr7g0235551 35.714 154 95 2 1 151 305 457 5.61e-30 113
Msa0366560 MtrunA17_Chr8g0339331 35.714 154 98 1 1 154 316 468 6.47e-30 113
Msa0366560 MtrunA17_Chr2g0314781 37.838 148 80 2 16 154 1 145 6.92e-30 107
Msa0366560 MtrunA17_Chr5g0395381 34.932 146 92 1 6 151 279 421 8.90e-30 112
Msa0366560 MtrunA17_Chr5g0395321 35.616 146 91 1 6 151 304 446 9.70e-30 112
Msa0366560 MtrunA17_Chr8g0356001 37.255 153 93 1 2 154 309 458 9.74e-30 112
Msa0366560 MtrunA17_Chr6g0484841 37.838 148 88 2 5 151 309 453 1.05e-29 112
Msa0366560 MtrunA17_Chr7g0258211 35.928 167 86 3 1 154 306 464 1.17e-29 112
Msa0366560 MtrunA17_Chr7g0246151 38.255 149 89 1 3 151 306 451 1.22e-29 112
Msa0366560 MtrunA17_Chr3g0084921 35.948 153 96 2 3 154 312 463 1.33e-29 112
Msa0366560 MtrunA17_Chr4g0035921 36.424 151 93 2 1 151 315 462 1.56e-29 112
Msa0366560 MtrunA17_Chr5g0395331 35.374 147 92 1 5 151 310 453 1.64e-29 112
Msa0366560 MtrunA17_Chr7g0246121 36.913 149 91 1 3 151 304 449 1.68e-29 112
Msa0366560 MtrunA17_Chr8g0362481 32.667 150 100 1 2 151 239 387 2.19e-29 111
Msa0366560 MtrunA17_Chr4g0039901 37.086 151 92 1 2 152 302 449 3.12e-29 111
Msa0366560 MtrunA17_Chr7g0246221 36.000 150 93 1 2 151 306 452 4.00e-29 110
Msa0366560 MtrunA17_Chr1g0174481 34.667 150 96 2 2 151 304 451 4.09e-29 110
Msa0366560 MtrunA17_Chr5g0401681 38.514 148 81 2 1 147 300 438 4.25e-29 110
Msa0366560 MtrunA17_Chr1g0198191 36.913 149 91 3 6 153 322 468 5.86e-29 110
Msa0366560 MtrunA17_Chr4g0030701 37.333 150 92 2 3 151 313 461 6.61e-29 110
Msa0366560 MtrunA17_Chr5g0430131 34.868 152 95 2 1 151 304 452 7.12e-29 110
Msa0366560 MtrunA17_Chr4g0030711 36.667 150 93 2 3 151 316 464 1.26e-28 109
Msa0366560 MtrunA17_Chr4g0046661 37.162 148 92 1 1 148 26 172 1.32e-28 105
Msa0366560 MtrunA17_Chr4g0052881 36.424 151 88 1 1 151 301 443 1.53e-28 109
Msa0366560 MtrunA17_Chr3g0116681 34.211 152 97 1 3 154 307 455 1.76e-28 109
Msa0366560 MtrunA17_Chr6g0451811 36.054 147 93 1 5 151 10 155 2.45e-28 103
Msa0366560 MtrunA17_Chr4g0046631 37.748 151 93 1 1 151 320 469 3.12e-28 108
Msa0366560 MtrunA17_Chr6g0472311 32.895 152 99 1 3 154 320 468 4.13e-28 108
Msa0366560 MtrunA17_Chr4g0074581 35.099 151 97 1 3 152 345 495 6.93e-28 107
Msa0366560 MtrunA17_Chr6g0451691 37.671 146 90 1 6 151 334 478 7.93e-28 107
Msa0366560 MtrunA17_Chr5g0403331 35.099 151 95 1 1 151 306 453 8.47e-28 107
Msa0366560 MtrunA17_Chr6g0463801 37.063 143 87 1 9 151 307 446 1.06e-27 107
Msa0366560 MtrunA17_Chr2g0280011 33.113 151 95 2 6 151 14 163 1.36e-27 102
Msa0366560 MtrunA17_Chr8g0390871 35.570 149 91 3 6 153 33 177 1.47e-27 102
Msa0366560 MtrunA17_Chr5g0402981 35.211 142 90 2 11 151 3 143 1.52e-27 101
Msa0366560 MtrunA17_Chr4g0047661 33.553 152 98 1 3 154 321 469 1.69e-27 106
Msa0366560 MtrunA17_Chr4g0039391 36.424 151 92 1 1 151 305 451 1.91e-27 106
Msa0366560 MtrunA17_Chr6g0484811 32.895 152 98 2 3 153 308 456 2.02e-27 106
Msa0366560 MtrunA17_Chr6g0451751 35.570 149 95 1 6 154 330 477 2.23e-27 106
Msa0366560 MtrunA17_Chr4g0058201 34.459 148 86 2 6 149 299 439 2.57e-27 105
Msa0366560 MtrunA17_Chr4g0058261 33.557 149 96 1 5 153 337 482 2.99e-27 105
Msa0366560 MtrunA17_Chr7g0265611 38.710 155 89 4 2 154 319 469 3.00e-27 105
Msa0366560 MtrunA17_Chr3g0082701 39.189 148 87 2 5 151 330 475 3.43e-27 105
Msa0366560 MtrunA17_Chr1g0174471 34.000 150 97 2 2 151 325 472 3.90e-27 105
Msa0366560 MtrunA17_Chr1g0207841 36.184 152 88 3 3 151 318 463 5.32e-27 105
Msa0366560 MtrunA17_Chr6g0451771 34.014 147 96 1 5 151 27 172 5.42e-27 100
Msa0366560 MtrunA17_Chr5g0419451 32.653 147 95 2 6 151 326 469 5.92e-27 105
Msa0366560 MtrunA17_Chr4g0052851 35.333 150 89 1 2 151 292 433 6.03e-27 104
Msa0366560 MtrunA17_Chr7g0258221 33.775 151 98 2 1 151 307 455 8.07e-27 104
Msa0366560 MtrunA17_Chr5g0401691 33.333 147 92 1 1 147 315 455 9.62e-27 104
Msa0366560 MtrunA17_Chr2g0296661 37.500 152 87 1 1 152 305 448 9.87e-27 104
Msa0366560 MtrunA17_Chr2g0304871 36.232 138 87 1 14 151 329 465 1.02e-26 104
Msa0366560 MtrunA17_Chr2g0280061 35.294 153 89 4 6 151 14 163 1.25e-26 99.8
Msa0366560 MtrunA17_Chr8g0390881 36.000 150 91 3 3 151 308 453 1.39e-26 103
Msa0366560 MtrunA17_Chr4g0058231 33.333 147 95 1 3 149 305 448 1.41e-26 103
Msa0366560 MtrunA17_Chr6g0451681 32.877 146 97 1 6 151 283 427 1.60e-26 103
Msa0366560 MtrunA17_Chr2g0296651 34.014 147 89 1 1 147 300 438 1.63e-26 103
Msa0366560 MtrunA17_Chr4g0047691 32.468 154 101 1 1 154 317 467 1.72e-26 103
Msa0366560 MtrunA17_Chr1g0176831 35.185 162 93 2 2 154 330 488 2.33e-26 103
Msa0366560 MtrunA17_Chr8g0339311 33.562 146 97 0 9 154 331 476 2.50e-26 103
Msa0366560 MtrunA17_Chr8g0351801 32.298 161 101 3 1 154 311 470 3.57e-26 102
Msa0366560 MtrunA17_Chr8g0355961 37.654 162 89 2 2 154 309 467 5.81e-26 102
Msa0366560 MtrunA17_Chr6g0466331 35.616 146 91 1 6 151 308 450 6.18e-26 102
Msa0366560 MtrunA17_Chr1g0210091 32.680 153 99 2 2 151 336 487 6.28e-26 102
Msa0366560 MtrunA17_Chr8g0387101 34.194 155 95 3 3 151 304 457 6.37e-26 102
Msa0366560 MtrunA17_Chr2g0280081 33.775 151 94 2 6 151 807 956 6.37e-26 102
Msa0366560 MtrunA17_Chr2g0280081 32.468 154 98 2 3 151 303 455 1.42e-23 95.9
Msa0366560 MtrunA17_Chr6g0465511 35.616 146 91 1 6 151 308 450 6.63e-26 102
Msa0366560 MtrunA17_Chr6g0451641 33.113 151 100 1 1 151 318 467 7.64e-26 102
Msa0366560 MtrunA17_Chr4g0058281 32.215 149 98 1 6 154 320 465 8.20e-26 101
Msa0366560 MtrunA17_Chr4g0058211 29.412 153 105 1 2 154 21 170 1.41e-25 97.1
Msa0366560 MtrunA17_Chr3g0101631 34.247 146 93 1 6 151 303 445 1.44e-25 100
Msa0366560 MtrunA17_Chr3g0116741 32.000 150 99 1 2 151 318 464 1.49e-25 101
Msa0366560 MtrunA17_Chr6g0466941 34.868 152 97 2 1 151 318 468 1.61e-25 100
Msa0366560 MtrunA17_Chr4g0047641 30.921 152 102 1 3 154 320 468 2.37e-25 100
Msa0366560 MtrunA17_Chr5g0430101 32.667 150 97 2 3 151 304 450 2.79e-25 100
Msa0366560 MtrunA17_Chr1g0160861 33.775 151 97 1 2 152 141 288 3.07e-25 98.6
Msa0366560 MtrunA17_Chr5g0432751 32.026 153 103 1 2 154 306 457 5.38e-25 99.4
Msa0366560 MtrunA17_Chr8g0361471 34.932 146 92 1 6 151 308 450 6.38e-25 99.4
Msa0366560 MtrunA17_Chr1g0200961 35.099 151 95 1 2 152 300 447 7.33e-25 99.0
Msa0366560 MtrunA17_Chr6g0477081 43.636 110 62 0 1 110 132 241 8.22e-25 95.5
Msa0366560 MtrunA17_Chr6g0451781 34.694 147 95 1 5 151 362 507 9.06e-25 99.0
Msa0366560 MtrunA17_Chr5g0430081 34.416 154 93 3 1 151 303 451 9.48e-25 99.0
Msa0366560 MtrunA17_Chr5g0403351 32.667 150 98 1 2 151 306 452 1.01e-24 98.6
Msa0366560 MtrunA17_Chr6g0466901 34.899 149 95 2 1 148 317 464 1.03e-24 99.0
Msa0366560 MtrunA17_Chr2g0280121 31.818 154 99 2 3 151 309 461 1.15e-24 98.6
Msa0366560 MtrunA17_Chr4g0047631 31.579 152 101 1 3 154 316 464 1.52e-24 98.2
Msa0366560 MtrunA17_Chr4g0008101 34.932 146 94 1 6 151 330 474 2.33e-24 97.8
Msa0366560 MtrunA17_Chr6g0451741 34.247 146 95 1 6 151 352 496 2.38e-24 97.8
Msa0366560 MtrunA17_Chr1g0197871 33.742 163 95 3 1 154 298 456 2.72e-24 97.4
Msa0366560 MtrunA17_Chr5g0430071 29.801 151 102 2 2 151 159 306 3.03e-24 96.3
Msa0366560 MtrunA17_Chr1g0205361 33.113 151 98 1 2 152 300 447 3.07e-24 97.4
Msa0366560 MtrunA17_Chr3g0101701 34.437 151 96 1 1 151 307 454 4.27e-24 97.1
Msa0366560 MtrunA17_Chr1g0160851 33.113 151 98 1 2 152 300 447 4.56e-24 97.1
Msa0366560 MtrunA17_Chr4g0058191 29.221 154 106 1 1 154 292 442 4.78e-24 96.7
Msa0366560 MtrunA17_Chr5g0446151 36.552 145 88 2 9 153 312 452 4.81e-24 96.7
Msa0366560 MtrunA17_Chr5g0413911 31.579 152 100 2 3 151 330 480 6.66e-24 96.7
Msa0366560 MtrunA17_Chr1g0200951 32.886 149 97 3 6 151 332 480 6.94e-24 96.7
Msa0366560 MtrunA17_Chr3g0101601 32.877 146 96 1 6 151 303 446 7.11e-24 96.3
Msa0366560 MtrunA17_Chr5g0430031 30.921 152 101 2 1 151 305 453 8.32e-24 96.3
Msa0366560 MtrunA17_Chr2g0280071 31.126 151 98 2 6 151 339 488 9.82e-24 96.3
Msa0366560 MtrunA17_Chr1g0197891 33.129 163 96 3 1 154 298 456 1.02e-23 95.9
Msa0366560 MtrunA17_Chr1g0197881 33.129 163 96 3 1 154 297 455 1.05e-23 95.9
Msa0366560 MtrunA17_Chr1g0197851 33.129 163 96 3 1 154 298 456 1.09e-23 95.9
Msa0366560 MtrunA17_Chr5g0431501 29.932 147 100 1 2 148 305 448 1.68e-23 95.5
Msa0366560 MtrunA17_Chr5g0431461 29.932 147 100 1 2 148 305 448 1.68e-23 95.5
Msa0366560 MtrunA17_Chr8g0377341 31.973 147 96 2 6 151 335 478 1.87e-23 95.1
Msa0366560 MtrunA17_Chr4g0046701 40.000 110 65 1 42 151 1 109 2.22e-23 90.1
Msa0366560 MtrunA17_Chr3g0101621 32.877 146 96 1 6 151 297 440 2.94e-23 94.7
Msa0366560 MtrunA17_Chr3g0101711 34.932 146 92 1 6 151 311 453 2.98e-23 94.7
Msa0366560 MtrunA17_Chr8g0346261 30.405 148 100 3 6 151 350 496 3.32e-23 94.7
Msa0366560 MtrunA17_Chr3g0101731 31.507 146 97 1 6 151 308 450 3.80e-23 94.4
Msa0366560 MtrunA17_Chr7g0246131 36.000 150 93 1 2 151 307 453 3.85e-23 94.4
Msa0366560 MtrunA17_Chr5g0445441 31.293 147 98 1 2 148 344 487 4.65e-23 94.4
Msa0366560 MtrunA17_Chr5g0430091 32.680 153 99 2 3 154 307 456 5.52e-23 94.0
Msa0366560 MtrunA17_Chr5g0445451 30.667 150 101 1 2 151 303 449 6.13e-23 93.6
Msa0366560 MtrunA17_Chr5g0423621 33.835 133 85 1 16 148 1 130 6.27e-23 89.4
Msa0366560 MtrunA17_Chr8g0364651 29.412 153 106 1 1 151 297 449 7.92e-23 93.6
Msa0366560 MtrunA17_Chr3g0101611 32.168 143 94 1 9 151 313 452 7.97e-23 93.6
Msa0366560 MtrunA17_Chr5g0446161 33.784 148 94 2 6 153 308 451 9.16e-23 93.2
Msa0366560 MtrunA17_Chr2g0280041 31.788 151 97 2 6 151 338 487 1.02e-22 93.2
Msa0366560 MtrunA17_Chr5g0409051 29.412 153 107 1 1 152 309 461 1.29e-22 92.8
Msa0366560 MtrunA17_Chr1g0205371 35.762 151 94 1 2 152 301 448 1.85e-22 92.4
Msa0366560 MtrunA17_Chr3g0101671 32.192 146 96 1 6 151 312 454 2.09e-22 92.4
Msa0366560 MtrunA17_Chr5g0445461 33.775 151 97 2 1 151 302 449 2.89e-22 91.7
Msa0366560 MtrunA17_Chr5g0445421 30.201 149 101 1 3 151 357 502 5.03e-22 91.3
Msa0366560 MtrunA17_Chr3g0101591 30.986 142 95 1 10 151 49 187 5.31e-22 88.2
Msa0366560 MtrunA17_Chr5g0431641 32.215 149 98 1 3 151 304 449 6.02e-22 90.9
Msa0366560 MtrunA17_Chr1g0162811 34.247 146 92 2 6 151 308 449 6.36e-22 90.9
Msa0366560 MtrunA17_Chr7g0246181 36.667 150 92 1 2 151 305 451 7.05e-22 90.9
Msa0366560 MtrunA17_Chr6g0463621 29.252 147 102 2 6 151 7 152 7.77e-22 87.0
Msa0366560 MtrunA17_Chr5g0431671 32.192 146 96 1 6 151 308 450 9.19e-22 90.5
Msa0366560 MtrunA17_Chr5g0446101 33.333 144 92 2 9 152 124 263 9.38e-22 89.0
Msa0366560 MtrunA17_Chr5g0430111 30.894 123 84 1 1 122 305 427 1.26e-21 89.7
Msa0366560 MtrunA17_Chr3g0101661 31.507 146 97 1 6 151 311 453 1.32e-21 90.1
Msa0366560 MtrunA17_Chr5g0431511 30.405 148 100 1 1 148 304 448 1.41e-21 89.7
Msa0366560 MtrunA17_Chr4g0017411 32.667 150 93 1 2 151 289 430 1.85e-21 89.4
Msa0366560 MtrunA17_Chr6g0463791 30.612 147 100 2 6 151 303 448 2.50e-21 89.4
Msa0366560 MtrunA17_Chr3g0101651 32.192 146 96 1 6 151 312 454 2.70e-21 89.0
Msa0366560 MtrunA17_Chr7g0218611 33.113 151 97 2 1 151 303 449 1.57e-20 87.0
Msa0366560 MtrunA17_Chr3g0101811 29.452 146 100 1 6 151 323 465 1.82e-20 86.7
Msa0366560 MtrunA17_Chr5g0403321 28.859 149 103 1 3 151 310 455 1.93e-20 86.7
Msa0366560 MtrunA17_Chr3g0101721 29.452 146 100 1 6 151 310 452 2.01e-20 86.7
Msa0366560 MtrunA17_Chr5g0445531 30.822 146 98 1 6 151 306 448 2.02e-20 86.7
Msa0366560 MtrunA17_Chr4g0011921 31.884 138 91 1 14 151 311 445 3.82e-20 85.9
Msa0366560 MtrunA17_Chr4g0011851 27.815 151 106 1 1 151 17 164 3.96e-20 82.8
Msa0366560 MtrunA17_Chr4g0011901 31.757 148 98 1 1 148 298 442 4.13e-20 85.9
Msa0366560 MtrunA17_Chr1g0156101 30.000 150 102 1 2 151 314 460 4.28e-20 85.5
Msa0366560 MtrunA17_Chr5g0445381 29.530 149 102 1 3 151 335 480 6.19e-20 85.1
Msa0366560 MtrunA17_Chr4g0011941 29.139 151 104 1 1 151 2 149 7.18e-20 81.6
Msa0366560 MtrunA17_Chr5g0430151 32.258 124 80 2 31 153 6 126 7.96e-20 81.3
Msa0366560 MtrunA17_Chr5g0431591 29.452 146 100 1 6 151 125 267 1.53e-19 83.2
Msa0366560 MtrunA17_Chr4g0020041 28.767 146 101 1 6 151 309 451 2.46e-19 83.6
Msa0366560 MtrunA17_Chr5g0445761 33.113 151 98 1 1 151 2 149 2.65e-19 80.5
Msa0366560 MtrunA17_Chr4g0024771 29.452 146 100 1 6 151 307 449 3.24e-19 83.2
Msa0366560 MtrunA17_Chr3g0101691 30.137 146 99 1 6 151 312 454 4.62e-19 82.8
Msa0366560 MtrunA17_Chr3g0086681 35.345 116 72 2 37 151 4 117 5.18e-19 79.0
Msa0366560 MtrunA17_Chr4g0011961 29.054 148 102 1 1 148 297 441 1.87e-18 80.9
Msa0366560 MtrunA17_Chr3g0101581 28.767 146 101 1 6 151 309 451 2.38e-18 80.9
Msa0366560 MtrunA17_Chr4g0076161 29.730 148 101 2 6 151 306 452 2.47e-18 80.5
Msa0366560 MtrunA17_Chr1g0167321 32.877 146 95 1 6 151 307 449 3.31e-18 80.1
Msa0366560 MtrunA17_Chr7g0218601 32.450 151 96 3 1 151 304 448 4.04e-18 80.1
Msa0366560 MtrunA17_Chr5g0445351 32.258 124 81 1 28 151 52 172 8.19e-18 76.6
Msa0366560 MtrunA17_Chr3g0101571 28.767 146 101 2 6 151 306 448 1.75e-17 78.2
Msa0366560 MtrunA17_Chr3g0101741 28.767 146 96 2 6 151 235 372 2.52e-17 77.8
Msa0366560 MtrunA17_Chr5g0444981 33.099 142 91 2 6 147 17 154 2.74e-17 75.5
Msa0366560 MtrunA17_Chr5g0430041 32.258 124 76 3 31 151 6 124 2.96e-17 74.3
Msa0366560 MtrunA17_Chr5g0419691 28.261 138 96 1 14 151 311 445 3.33e-17 77.4
Msa0366560 MtrunA17_Chr5g0406651 29.801 151 103 1 1 151 299 446 3.85e-17 77.4
Msa0366560 MtrunA17_Chr8g0357431 32.192 146 96 1 6 151 309 451 4.40e-17 77.0
Msa0366560 MtrunA17_Chr2g0280261 29.801 151 103 1 1 151 296 443 6.83e-17 76.6
Msa0366560 MtrunA17_Chr1g0162801 32.192 146 96 1 6 151 310 452 8.42e-17 76.3
Msa0366560 MtrunA17_Chr3g0101821 30.405 148 100 1 6 153 308 452 8.58e-17 76.3
Msa0366560 MtrunA17_Chr3g0116731 33.663 101 60 1 51 151 1 94 1.80e-16 71.2
Msa0366560 MtrunA17_Chr3g0101751 30.822 146 98 1 6 151 315 457 2.40e-16 75.1
Msa0366560 MtrunA17_Chr3g0101761 31.507 146 97 1 6 151 308 450 2.50e-16 74.7
Msa0366560 MtrunA17_Chr3g0101801 30.137 146 99 1 6 151 315 457 2.52e-16 74.7
Msa0366560 MtrunA17_Chr4g0011981 27.703 148 104 1 1 148 298 442 3.30e-16 74.7
Msa0366560 MtrunA17_Chr8g0357421 31.507 146 97 1 6 151 308 450 6.10e-16 73.9
Msa0366560 MtrunA17_Chr3g0101831 29.452 146 100 1 6 151 309 451 7.33e-16 73.6
Msa0366560 MtrunA17_Chr8g0387001 31.013 158 95 4 1 147 301 455 9.29e-16 73.2
Msa0366560 MtrunA17_Chr8g0364631 34.821 112 65 2 47 151 347 457 1.30e-15 72.8
Msa0366560 MtrunA17_Chr0c19g0493771 30.128 156 98 4 1 152 454 602 1.33e-15 72.8
Msa0366560 MtrunA17_Chr4g0011871 26.812 138 98 1 14 151 312 446 1.38e-15 72.8
Msa0366560 MtrunA17_Chr1g0156061 29.333 150 103 1 2 151 270 416 2.13e-15 72.0
Msa0366560 MtrunA17_Chr1g0156081 29.333 150 103 1 2 151 338 484 2.46e-15 72.0
Msa0366560 MtrunA17_Chr4g0011881 29.139 151 104 1 1 151 298 445 3.13e-15 71.6
Msa0366560 MtrunA17_Chr4g0056981 45.714 70 38 0 26 95 1 70 3.46e-15 66.2
Msa0366560 MtrunA17_Chr8g0348751 29.114 158 100 4 1 147 304 460 9.42e-15 70.5
Msa0366560 MtrunA17_Chr8g0351401 29.560 159 97 4 1 147 304 459 1.31e-14 70.1
Msa0366560 MtrunA17_Chr5g0429651 29.747 158 100 3 1 147 301 458 1.53e-14 69.7
Msa0366560 MtrunA17_Chr4g0028321 39.744 78 45 1 74 151 31 106 1.87e-14 66.6
Msa0366560 MtrunA17_Chr4g0038271 28.931 159 98 4 1 147 355 510 1.33e-13 67.0
Msa0366560 MtrunA17_Chr2g0334021 29.870 154 93 5 6 154 311 454 1.61e-13 67.0
Msa0366560 MtrunA17_Chr3g0117301 29.703 101 68 1 51 151 1 98 2.23e-13 62.8
Msa0366560 MtrunA17_Chr3g0101541 32.353 102 66 1 50 151 3 101 3.39e-13 62.8
Msa0366560 MtrunA17_Chr5g0445371 32.258 93 60 1 59 151 90 179 1.05e-12 63.5
Msa0366560 MtrunA17_Chr7g0225531 26.174 149 107 3 1 147 314 461 2.09e-12 63.5
Msa0366560 MtrunA17_Chr7g0248991 29.752 121 75 3 1 117 236 350 2.42e-12 63.2
Msa0366560 MtrunA17_Chr3g0104351 26.875 160 104 3 1 147 307 466 4.04e-12 62.8
Msa0366560 MtrunA17_Chr3g0135841 31.250 144 91 5 9 147 344 484 6.21e-12 62.4
Msa0366560 MtrunA17_Chr1g0179811 27.891 147 104 2 1 147 345 489 7.90e-12 62.0
Msa0366560 MtrunA17_Chr8g0351311 27.044 159 100 4 1 147 307 461 1.16e-11 61.6
Msa0366560 MtrunA17_Chr1g0163421 28.472 144 96 4 9 147 349 490 1.46e-11 61.2
Msa0366560 MtrunA17_Chr1g0204271 27.439 164 97 6 1 147 297 455 1.53e-11 61.2
Msa0366560 MtrunA17_Chr1g0151221 29.167 144 94 5 9 147 336 476 1.56e-11 61.2
Msa0366560 MtrunA17_Chr1g0164321 27.329 161 101 3 1 147 339 497 1.85e-11 60.8
Msa0366560 MtrunA17_Chr6g0449381 27.891 147 99 3 6 147 311 455 2.88e-11 60.5
Msa0366560 MtrunA17_Chr1g0183611 30.137 146 91 5 9 147 234 375 6.35e-11 59.3
Msa0366560 MtrunA17_Chr1g0163451 28.472 144 96 4 9 147 333 474 6.83e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366560 AT2G22330.1 61.688 154 58 1 1 154 336 488 1.01e-66 212
Msa0366560 AT2G22330.2 61.688 154 58 1 1 154 359 511 1.34e-66 212
Msa0366560 AT4G39950.1 61.039 154 59 1 1 154 334 486 5.03e-66 210
Msa0366560 AT4G39950.2 61.039 154 59 1 1 154 374 526 1.40e-65 209
Msa0366560 AT5G05260.1 57.792 154 64 1 1 154 292 444 5.33e-65 206
Msa0366560 AT5G05260.2 57.792 154 64 1 1 154 324 476 1.26e-64 206
Msa0366560 AT1G16400.1 57.419 155 64 1 2 154 327 481 1.02e-63 204
Msa0366560 AT1G16410.1 56.774 155 65 1 2 154 328 482 2.51e-63 202
Msa0366560 AT1G79370.1 57.333 150 62 1 5 154 339 486 2.54e-62 200
Msa0366560 AT1G58260.1 55.696 158 63 2 2 154 319 474 1.93e-59 192
Msa0366560 AT1G01280.1 43.506 154 85 2 3 154 307 460 3.00e-40 141
Msa0366560 AT5G35917.1 47.581 124 50 1 1 124 328 436 1.86e-37 134
Msa0366560 AT2G40890.1 39.597 149 87 1 3 151 299 444 1.88e-35 128
Msa0366560 AT3G32047.1 39.073 151 91 1 1 151 308 457 3.05e-35 128
Msa0366560 AT1G28430.1 39.073 151 89 2 6 154 312 461 4.56e-35 127
Msa0366560 AT5G07990.1 40.000 150 89 1 3 151 302 451 4.50e-34 125
Msa0366560 AT1G66540.2 38.776 147 82 1 1 147 126 264 6.01e-34 121
Msa0366560 AT2G14100.1 36.424 151 95 1 1 151 310 459 1.31e-33 124
Msa0366560 AT1G66540.1 38.776 147 82 1 1 147 185 323 2.16e-33 121
Msa0366560 AT5G35920.1 52.381 105 45 2 50 154 3 102 3.56e-33 115
Msa0366560 AT2G27000.1 37.500 152 92 2 2 151 308 458 3.86e-33 122
Msa0366560 AT4G37340.1 38.776 147 82 1 1 147 298 436 5.00e-33 122
Msa0366560 AT1G74540.1 37.748 151 91 2 1 151 290 437 1.35e-32 120
Msa0366560 AT3G20130.2 37.179 156 90 3 6 154 286 440 1.52e-32 120
Msa0366560 AT4G12300.1 37.671 146 89 1 6 151 317 460 1.64e-32 120
Msa0366560 AT4G37430.1 38.312 154 91 1 1 154 298 447 1.69e-32 120
Msa0366560 AT3G20130.1 37.179 156 90 3 6 154 314 468 1.85e-32 120
Msa0366560 AT3G20120.2 35.032 157 89 3 2 151 173 323 2.01e-32 118
Msa0366560 AT3G20120.3 35.032 157 89 3 2 151 173 323 2.01e-32 118
Msa0366560 AT3G20120.1 35.032 157 89 3 2 151 173 323 2.01e-32 118
Msa0366560 AT5G36220.2 35.714 154 91 1 1 154 158 303 3.72e-32 117
Msa0366560 AT3G28740.1 38.095 147 83 2 1 147 306 444 5.11e-32 119
Msa0366560 AT3G20950.1 36.913 149 91 2 1 147 313 460 6.08e-32 119
Msa0366560 AT4G37330.1 39.073 151 84 1 1 151 295 437 6.35e-32 119
Msa0366560 AT1G74550.1 37.748 151 91 2 1 151 284 431 1.00e-31 118
Msa0366560 AT1G33730.1 38.667 150 89 1 2 151 174 320 1.12e-31 116
Msa0366560 AT1G33730.2 38.667 150 89 1 2 151 174 320 1.12e-31 116
Msa0366560 AT3G20120.4 34.810 158 90 3 1 151 308 459 1.14e-31 118
Msa0366560 AT1G16410.2 56.322 87 38 0 2 88 328 414 1.56e-31 117
Msa0366560 AT3G20140.1 37.748 151 91 2 1 151 309 456 2.16e-31 117
Msa0366560 AT4G22710.1 36.364 154 95 1 1 154 322 472 2.75e-31 117
Msa0366560 AT5G36220.1 35.065 154 92 1 1 154 304 449 3.41e-31 117
Msa0366560 AT4G22690.1 37.838 148 89 1 1 148 353 497 3.59e-31 117
Msa0366560 AT2G45550.1 36.913 149 91 1 3 151 311 456 4.69e-31 116
Msa0366560 AT4G37400.1 38.312 154 93 1 1 154 293 444 6.15e-31 116
Msa0366560 AT4G12320.1 35.616 146 92 1 6 151 319 462 7.28e-31 116
Msa0366560 AT3G20100.1 35.404 161 96 3 1 154 309 468 7.79e-31 116
Msa0366560 AT2G45570.1 38.255 149 89 1 3 151 312 457 9.18e-31 115
Msa0366560 AT3G20935.1 33.557 149 96 2 1 147 135 282 9.48e-31 113
Msa0366560 AT4G15350.1 35.526 152 95 2 2 151 304 454 1.11e-30 115
Msa0366560 AT4G15330.2 36.735 147 92 1 5 151 281 426 1.16e-30 115
Msa0366560 AT5G47990.1 36.538 156 91 4 3 154 312 463 1.16e-30 115
Msa0366560 AT4G37410.1 34.615 156 94 2 1 154 295 444 1.23e-30 115
Msa0366560 AT4G36220.1 38.411 151 90 2 1 151 317 464 1.24e-30 115
Msa0366560 AT4G15330.1 36.986 146 91 1 6 151 310 454 1.61e-30 115
Msa0366560 AT4G37360.1 37.063 143 82 1 5 147 302 436 2.39e-30 114
Msa0366560 AT3G61040.1 38.961 154 90 2 2 154 298 448 2.96e-30 114
Msa0366560 AT4G37320.1 36.364 154 90 1 1 154 298 443 4.47e-30 114
Msa0366560 AT3G20080.4 34.161 161 98 3 1 154 173 332 6.93e-30 112
Msa0366560 AT3G20080.5 34.161 161 98 3 1 154 173 332 6.93e-30 112
Msa0366560 AT3G20080.6 34.161 161 98 3 1 154 173 332 6.93e-30 112
Msa0366560 AT3G20080.3 34.161 161 98 3 1 154 173 332 6.93e-30 112
Msa0366560 AT5G57220.1 36.364 154 90 1 1 154 293 438 1.24e-29 112
Msa0366560 AT5G42580.1 34.615 156 93 3 1 151 294 445 1.90e-29 112
Msa0366560 AT3G20080.2 34.161 161 98 3 1 154 310 469 2.07e-29 112
Msa0366560 AT3G20080.1 34.161 161 98 3 1 154 310 469 2.07e-29 112
Msa0366560 AT4G12310.1 34.932 146 93 1 6 151 321 464 2.18e-29 112
Msa0366560 AT3G25180.1 37.671 146 88 1 6 151 316 458 3.27e-29 111
Msa0366560 AT3G20090.1 36.486 148 92 2 5 151 177 323 3.68e-29 110
Msa0366560 AT1G01190.1 36.000 150 94 2 6 153 335 484 4.05e-29 111
Msa0366560 AT1G01190.2 36.000 150 94 2 6 153 340 489 4.27e-29 111
Msa0366560 AT2G23190.1 35.714 154 91 2 1 154 342 487 5.02e-29 111
Msa0366560 AT1G50560.1 34.868 152 96 2 2 151 314 464 6.59e-29 110
Msa0366560 AT1G33720.4 36.667 150 92 1 2 151 178 324 6.86e-29 109
Msa0366560 AT1G33720.3 36.667 150 92 1 2 151 178 324 6.86e-29 109
Msa0366560 AT1G33720.5 36.667 150 92 1 2 151 178 324 6.86e-29 109
Msa0366560 AT1G33720.2 36.667 150 92 1 2 151 203 349 9.33e-29 109
Msa0366560 AT5G04330.1 38.158 152 90 3 1 151 305 453 9.84e-29 110
Msa0366560 AT4G15360.1 36.842 152 84 3 6 152 314 458 1.15e-28 110
Msa0366560 AT3G20090.2 36.735 147 91 2 6 151 316 461 1.43e-28 110
Msa0366560 AT3G20940.1 32.886 149 97 2 1 147 310 457 2.34e-28 109
Msa0366560 AT3G20110.1 33.333 159 95 3 1 154 306 458 2.52e-28 109
Msa0366560 AT1G33720.1 36.424 151 93 1 1 151 309 456 2.91e-28 108
Msa0366560 AT4G37370.1 35.374 147 87 1 1 147 297 435 5.26e-28 108
Msa0366560 AT2G23220.1 36.806 144 83 2 11 154 323 458 6.03e-28 108
Msa0366560 AT1G50520.1 34.839 155 92 3 2 151 313 463 6.05e-28 108
Msa0366560 AT4G15380.1 32.298 161 101 3 1 154 305 464 6.86e-28 108
Msa0366560 AT2G45560.1 34.228 149 95 1 3 151 311 456 8.50e-28 107
Msa0366560 AT3G20960.1 35.811 148 93 2 6 152 211 357 8.79e-28 107
Msa0366560 AT4G31940.1 30.872 149 103 0 6 154 324 472 1.22e-27 107
Msa0366560 AT2G45580.2 35.333 150 93 3 2 151 158 303 1.40e-27 105
Msa0366560 AT1G64930.1 34.211 152 99 1 1 151 309 460 1.51e-27 107
Msa0366560 AT3G20960.2 35.811 148 93 2 6 152 314 460 2.17e-27 106
Msa0366560 AT5G04660.1 34.228 149 94 2 6 152 317 463 2.21e-27 106
Msa0366560 AT1G64940.1 36.000 150 93 3 3 151 313 460 3.59e-27 105
Msa0366560 AT2G45580.1 35.333 150 93 3 2 151 312 457 4.45e-27 105
Msa0366560 AT2G46660.1 34.000 150 97 2 6 153 333 482 1.63e-26 104
Msa0366560 AT2G27010.1 32.026 153 101 2 1 151 285 436 1.78e-26 103
Msa0366560 AT2G30490.1 32.680 153 102 1 2 154 305 456 1.89e-26 103
Msa0366560 AT3G61880.1 34.000 150 97 2 6 153 333 482 1.94e-26 103
Msa0366560 AT3G61880.2 34.000 150 97 2 6 153 333 482 2.88e-26 103
Msa0366560 AT2G42250.1 31.056 161 99 3 2 154 309 465 3.26e-26 103
Msa0366560 AT3G48310.1 35.417 144 89 2 6 148 295 435 3.36e-26 103
Msa0366560 AT5G04630.1 36.054 147 92 2 3 148 311 456 4.52e-26 102
Msa0366560 AT1G74110.1 34.667 150 95 3 5 151 341 490 7.55e-26 102
Msa0366560 AT4G37310.1 31.579 152 97 3 6 154 308 455 9.08e-26 102
Msa0366560 AT5G44620.1 30.519 154 104 1 1 154 316 466 1.45e-25 101
Msa0366560 AT5G35715.1 33.974 156 97 3 1 154 237 388 1.60e-25 100
Msa0366560 AT4G12330.1 31.818 154 102 2 1 154 315 465 2.44e-25 100
Msa0366560 AT4G31950.1 31.884 138 94 0 10 147 316 453 2.69e-25 100
Msa0366560 AT5G06900.1 35.211 142 86 3 6 147 307 442 3.77e-25 100
Msa0366560 AT3G26270.1 33.108 148 95 2 2 148 304 448 6.41e-25 99.8
Msa0366560 AT3G48270.1 34.028 144 91 2 6 148 294 434 8.81e-25 99.4
Msa0366560 AT3G48300.1 38.000 150 86 4 3 148 286 432 1.90e-24 98.2
Msa0366560 AT3G48300.2 38.000 150 86 4 3 148 288 434 1.91e-24 98.2
Msa0366560 AT3G26210.1 29.605 152 103 2 1 151 301 449 2.08e-24 98.2
Msa0366560 AT5G67310.1 31.818 154 97 1 1 154 309 454 2.56e-24 98.2
Msa0366560 AT3G10570.1 31.973 147 99 1 6 152 319 464 3.90e-24 97.4
Msa0366560 AT3G10560.1 33.113 151 100 1 3 153 316 465 4.07e-24 97.4
Msa0366560 AT3G03470.1 34.194 155 96 3 3 151 306 460 8.04e-24 96.7
Msa0366560 AT3G26160.1 31.579 152 100 2 1 151 302 450 8.46e-24 96.7
Msa0366560 AT5G06905.1 29.091 165 104 3 2 154 300 463 1.16e-23 96.3
Msa0366560 AT3G52970.1 36.301 146 88 4 12 154 322 465 1.32e-23 95.9
Msa0366560 AT3G52970.2 36.301 146 88 4 12 154 336 479 1.42e-23 95.9
Msa0366560 AT2G25160.1 33.571 140 90 2 14 151 326 464 1.44e-23 95.9
Msa0366560 AT4G31970.1 28.966 145 103 0 10 154 327 471 1.78e-23 95.5
Msa0366560 AT3G26320.1 28.571 154 107 1 1 154 299 449 2.71e-23 95.1
Msa0366560 AT1G11600.1 36.424 151 94 2 3 151 311 461 3.02e-23 95.1
Msa0366560 AT3G26180.2 31.788 151 99 2 2 151 169 316 5.18e-23 93.2
Msa0366560 AT1G13100.1 29.677 155 105 2 1 154 298 449 5.73e-23 94.0
Msa0366560 AT1G13110.1 30.065 153 103 2 2 153 305 454 6.21e-23 94.0
Msa0366560 AT1G13090.2 29.677 155 105 2 1 154 298 449 8.58e-23 93.6
Msa0366560 AT3G48280.1 32.639 144 93 2 6 148 294 434 9.28e-23 93.6
Msa0366560 AT3G26180.1 31.579 152 100 2 1 151 302 450 1.65e-22 92.8
Msa0366560 AT3G26330.1 28.571 154 107 1 1 154 299 449 2.00e-22 92.8
Msa0366560 AT5G25140.1 28.571 154 107 1 1 154 295 445 2.24e-22 92.4
Msa0366560 AT3G48290.1 31.788 151 99 3 5 154 295 442 2.28e-22 92.4
Msa0366560 AT3G48290.2 31.788 151 99 3 5 154 321 468 2.63e-22 92.4
Msa0366560 AT3G26310.1 29.221 154 106 1 1 154 298 448 3.07e-22 92.0
Msa0366560 AT4G13310.1 31.944 144 94 2 12 154 309 449 4.98e-22 91.7
Msa0366560 AT3G26230.1 31.544 149 97 2 2 148 300 445 5.09e-22 91.7
Msa0366560 AT3G53300.1 34.615 156 96 3 1 154 299 450 5.62e-22 91.3
Msa0366560 AT5G25120.1 28.289 152 106 1 3 154 297 445 7.57e-22 90.9
Msa0366560 AT3G26830.1 28.873 142 97 2 14 154 311 449 1.09e-21 90.5
Msa0366560 AT3G26170.1 30.921 152 101 2 1 151 302 450 1.45e-21 90.1
Msa0366560 AT5G25180.1 27.922 154 108 1 1 154 295 445 1.47e-21 90.1
Msa0366560 AT1G13080.2 30.201 149 100 2 1 148 184 329 1.64e-21 89.4
Msa0366560 AT3G26150.1 32.051 156 100 3 1 154 302 453 1.98e-21 89.7
Msa0366560 AT1G13710.1 31.757 148 96 3 6 151 321 465 2.41e-21 89.7
Msa0366560 AT5G10600.1 32.215 149 96 1 6 154 318 461 2.48e-21 89.7
Msa0366560 AT1G13080.1 30.201 149 100 2 1 148 302 447 2.90e-21 89.4
Msa0366560 AT5G25130.1 27.632 152 107 1 3 154 297 445 3.23e-21 89.4
Msa0366560 AT2G12190.1 32.653 147 98 1 6 151 315 461 3.33e-21 89.4
Msa0366560 AT3G26300.1 28.571 154 107 1 1 154 299 449 4.63e-21 89.0
Msa0366560 AT2G24180.1 29.139 151 104 1 1 151 305 452 5.13e-21 88.6
Msa0366560 AT1G64950.1 33.333 147 95 3 6 151 315 459 6.25e-21 88.6
Msa0366560 AT2G05180.1 31.655 139 80 3 6 139 314 442 6.33e-21 88.2
Msa0366560 AT3G26280.1 28.477 151 103 2 3 151 305 452 1.21e-20 87.8
Msa0366560 AT3G26280.2 28.477 151 103 2 3 151 322 469 1.22e-20 87.8
Msa0366560 AT3G48320.1 34.228 149 94 2 1 148 290 435 1.41e-20 87.4
Msa0366560 AT5G57260.1 27.564 156 107 2 1 153 299 451 1.84e-20 87.0
Msa0366560 AT4G13290.1 30.556 144 96 2 12 154 302 442 2.82e-20 86.7
Msa0366560 AT3G44250.1 34.615 156 96 3 1 154 298 449 5.56e-20 85.9
Msa0366560 AT5G10610.1 30.872 149 98 1 6 154 302 445 6.97e-20 85.5
Msa0366560 AT1G11610.1 32.215 149 96 3 5 151 300 445 8.76e-20 85.1
Msa0366560 AT1G11610.2 32.215 149 96 3 5 151 300 445 9.66e-20 85.1
Msa0366560 AT4G31500.1 28.571 147 103 2 6 151 302 447 2.30e-19 84.0
Msa0366560 AT2G30750.1 32.414 145 93 3 9 151 304 445 3.14e-19 83.6
Msa0366560 AT2G30770.1 31.034 145 95 3 9 151 304 445 8.70e-19 82.4
Msa0366560 AT3G53280.1 33.766 154 98 2 2 154 298 448 9.79e-19 82.0
Msa0366560 AT4G13770.1 27.389 157 108 3 1 154 298 451 1.11e-18 82.0
Msa0366560 AT3G26290.1 31.818 154 102 2 1 154 299 449 1.15e-18 82.0
Msa0366560 AT5G09970.1 31.333 150 97 4 6 151 340 487 1.26e-18 82.0
Msa0366560 AT3G26290.2 31.818 154 102 2 1 154 312 462 1.32e-18 81.6
Msa0366560 AT3G26190.1 30.968 155 103 2 1 154 299 450 2.30e-18 81.3
Msa0366560 AT1G64900.1 33.333 141 93 1 12 151 315 455 3.88e-18 80.5
Msa0366560 AT3G26200.1 30.323 155 104 2 1 154 299 450 4.21e-18 80.5
Msa0366560 AT3G26220.1 30.921 152 100 2 2 151 303 451 1.19e-17 79.0
Msa0366560 AT1G58265.1 45.588 68 34 1 90 154 12 79 1.01e-16 72.8
Msa0366560 AT3G61040.2 40.426 94 55 1 2 94 298 391 7.51e-16 73.6
Msa0366560 AT4G20240.1 32.456 114 71 3 9 119 305 415 1.41e-15 73.2
Msa0366560 AT5G61320.1 37.500 96 60 0 53 148 341 436 1.55e-15 73.2
Msa0366560 AT5G42590.1 27.922 154 107 2 2 154 298 448 4.99e-15 71.6
Msa0366560 AT5G58860.1 27.848 158 103 2 1 147 301 458 2.10e-14 69.7
Msa0366560 AT2G02580.1 26.623 154 110 1 1 154 299 449 2.13e-14 69.7
Msa0366560 AT5G25900.1 26.452 155 100 4 5 154 318 463 1.65e-13 67.4
Msa0366560 AT2G45580.3 34.043 94 61 1 2 95 312 404 1.85e-13 67.0
Msa0366560 AT5G24950.1 27.338 139 96 3 12 148 307 442 1.89e-13 67.0
Msa0366560 AT3G53290.1 34.483 116 72 2 39 154 246 357 2.71e-13 66.6
Msa0366560 AT1G63710.1 30.380 158 96 3 1 147 303 457 6.21e-13 65.5
Msa0366560 AT5G24960.1 29.530 149 100 3 2 148 298 443 1.77e-12 64.3
Msa0366560 AT4G00360.1 25.949 158 105 3 1 147 305 461 3.13e-12 63.5
Msa0366560 AT3G53130.1 26.531 147 106 2 1 147 345 489 3.40e-12 63.5
Msa0366560 AT4G39500.1 25.949 158 110 3 1 153 267 422 1.03e-11 62.0
Msa0366560 AT4G39500.2 25.949 158 110 3 1 153 317 472 1.12e-11 62.0
Msa0366560 AT2G27690.1 29.630 135 85 5 19 147 311 441 1.71e-11 61.2
Msa0366560 AT2G44890.1 27.215 158 101 4 1 147 303 457 1.83e-11 61.2
Msa0366560 AT3G25180.2 44.262 61 34 0 6 66 316 376 3.04e-11 60.5
Msa0366560 AT4G32170.1 26.415 159 109 4 1 153 303 459 3.28e-11 60.5
Msa0366560 AT1G01600.1 26.250 160 103 4 1 147 306 463 7.35e-11 59.7

Find 38 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTGAGTTTAGGAATAT+CGG 0.287102 3_1:-61437908 None:intergenic
GTTTAGGAATATCGGATTCT+TGG 0.312112 3_1:-61437900 None:intergenic
GGAGCATTGAAATCTGTTAT+TGG 0.316702 3_1:-61437967 None:intergenic
CGTTCTGGTTTGTATTTGTA+AGG 0.332396 3_1:-61438099 None:intergenic
GTCCATTCAACTGTGTTTGA+TGG 0.334166 3_1:-61437793 None:intergenic
AAGGATATGAACTTCAATTC+TGG 0.360150 3_1:-61438162 None:intergenic
TCCTAAACTCAATTTCTTGA+AGG 0.361318 3_1:+61437915 Msa0366560:CDS
CATGTATTGCTTGGAAGAAC+TGG 0.412360 3_1:+61438045 Msa0366560:CDS
GCCTTCAAGAAATTGAGTTT+AGG 0.412511 3_1:-61437916 None:intergenic
TCATTCTTAAGATGGCGTTC+TGG 0.419545 3_1:-61438114 None:intergenic
GAAGAATTGGACAATATAGT+TGG 0.442349 3_1:+61437862 Msa0366560:CDS
TTGCTTGGAAGAACTGGTCT+TGG 0.446617 3_1:+61438051 Msa0366560:CDS
GGCTGTCCTGGTATCATGCT+TGG 0.461036 3_1:+61438201 Msa0366560:CDS
ACAATATAGTTGGAAAAGAT+AGG 0.465679 3_1:+61437872 Msa0366560:CDS
ATCCATCAAACACAGTTGAA+TGG 0.469179 3_1:+61437791 Msa0366560:CDS
AGCAATACATGACTTCCCTT+TGG 0.470218 3_1:-61438033 None:intergenic
GGAAATTACTTCATACCAAA+GGG 0.475466 3_1:+61438018 Msa0366560:CDS
TCTATAAATGATACAATGGT+TGG 0.482958 3_1:+61437997 Msa0366560:CDS
ACAGGAAGGCGTGGCTGTCC+TGG 0.484218 3_1:+61438189 Msa0366560:CDS
TGCTTGGAAGAACTGGTCTT+GGG 0.487569 3_1:+61438052 Msa0366560:CDS
CCGAACCATCATTCTTAAGA+TGG 0.493621 3_1:-61438122 None:intergenic
CCATCTTAAGAATGATGGTT+CGG 0.495334 3_1:+61438122 Msa0366560:CDS
CATTGAAATCTGTTATTGGA+TGG 0.504503 3_1:-61437963 None:intergenic
AAGGGAAGTCATGTATTGCT+TGG 0.510842 3_1:+61438036 Msa0366560:CDS
GCCACGCCTTCCTGTACTAA+AGG 0.520091 3_1:-61438181 None:intergenic
AAGTTCATATCCTTTAGTAC+AGG 0.529485 3_1:+61438171 Msa0366560:CDS
GAACGCCATCTTAAGAATGA+TGG 0.531219 3_1:+61438117 Msa0366560:CDS
TGGAAATTACTTCATACCAA+AGG 0.531613 3_1:+61438017 Msa0366560:CDS
TGTATCATTTATAGAGACAT+GGG 0.548159 3_1:-61437989 None:intergenic
TTGTATCATTTATAGAGACA+TGG 0.568480 3_1:-61437990 None:intergenic
TATAGTTGGAAAAGATAGGA+TGG 0.588175 3_1:+61437876 Msa0366560:CDS
TCCTTTAGTACAGGAAGGCG+TGG 0.599257 3_1:+61438180 Msa0366560:CDS
TGTCTCTATAAATGATACAA+TGG 0.599430 3_1:+61437993 Msa0366560:CDS
TGAAATCTGTTATTGGATGG+AGG 0.605859 3_1:-61437960 None:intergenic
TCATATCCTTTAGTACAGGA+AGG 0.608298 3_1:+61438175 Msa0366560:CDS
AAACACAGTTGAATGGACAT+TGG 0.637511 3_1:+61437798 Msa0366560:CDS
GTAGAACCAAGCATGATACC+AGG 0.662662 3_1:-61438207 None:intergenic
GTATCATTTATAGAGACATG+GGG 0.685452 3_1:-61437988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAAAAAGTCATAGAAGAAT+TGG + chr3_1:61437849-61437868 Msa0366560:CDS 25.0%
! ACAATATAGTTGGAAAAGAT+AGG + chr3_1:61437872-61437891 Msa0366560:CDS 25.0%
! GAAATTGAGTTTAGGAATAT+CGG - chr3_1:61437911-61437930 None:intergenic 25.0%
! TGTATCATTTATAGAGACAT+GGG - chr3_1:61437992-61438011 None:intergenic 25.0%
! TTGTATCATTTATAGAGACA+TGG - chr3_1:61437993-61438012 None:intergenic 25.0%
! TGTCTCTATAAATGATACAA+TGG + chr3_1:61437993-61438012 Msa0366560:CDS 25.0%
! TCTATAAATGATACAATGGT+TGG + chr3_1:61437997-61438016 Msa0366560:CDS 25.0%
!! TAAGGTTCATTCCAAATTTT+TGG - chr3_1:61438084-61438103 None:intergenic 25.0%
!!! ATGACTTTTTCAAAGAGTTC+AGG - chr3_1:61437841-61437860 None:intergenic 30.0%
GAAGAATTGGACAATATAGT+TGG + chr3_1:61437862-61437881 Msa0366560:CDS 30.0%
TATAGTTGGAAAAGATAGGA+TGG + chr3_1:61437876-61437895 Msa0366560:CDS 30.0%
TCCTAAACTCAATTTCTTGA+AGG + chr3_1:61437915-61437934 Msa0366560:CDS 30.0%
CATTGAAATCTGTTATTGGA+TGG - chr3_1:61437966-61437985 None:intergenic 30.0%
GTATCATTTATAGAGACATG+GGG - chr3_1:61437991-61438010 None:intergenic 30.0%
TGGAAATTACTTCATACCAA+AGG + chr3_1:61438017-61438036 Msa0366560:CDS 30.0%
GGAAATTACTTCATACCAAA+GGG + chr3_1:61438018-61438037 Msa0366560:CDS 30.0%
TTGGGAGAAATCCAAAAATT+TGG + chr3_1:61438070-61438089 Msa0366560:CDS 30.0%
AAGGATATGAACTTCAATTC+TGG - chr3_1:61438165-61438184 None:intergenic 30.0%
AAGTTCATATCCTTTAGTAC+AGG + chr3_1:61438171-61438190 Msa0366560:CDS 30.0%
ATCCATCAAACACAGTTGAA+TGG + chr3_1:61437791-61437810 Msa0366560:CDS 35.0%
AAACACAGTTGAATGGACAT+TGG + chr3_1:61437798-61437817 Msa0366560:CDS 35.0%
GTTTAGGAATATCGGATTCT+TGG - chr3_1:61437903-61437922 None:intergenic 35.0%
GCCTTCAAGAAATTGAGTTT+AGG - chr3_1:61437919-61437938 None:intergenic 35.0%
TGAAATCTGTTATTGGATGG+AGG - chr3_1:61437963-61437982 None:intergenic 35.0%
!! GGAGCATTGAAATCTGTTAT+TGG - chr3_1:61437970-61437989 None:intergenic 35.0%
!! CGTTCTGGTTTGTATTTGTA+AGG - chr3_1:61438102-61438121 None:intergenic 35.0%
CCATCTTAAGAATGATGGTT+CGG + chr3_1:61438122-61438141 Msa0366560:CDS 35.0%
TCATATCCTTTAGTACAGGA+AGG + chr3_1:61438175-61438194 Msa0366560:CDS 35.0%
GTCCATTCAACTGTGTTTGA+TGG - chr3_1:61437796-61437815 None:intergenic 40.0%
AGCAATACATGACTTCCCTT+TGG - chr3_1:61438036-61438055 None:intergenic 40.0%
AAGGGAAGTCATGTATTGCT+TGG + chr3_1:61438036-61438055 Msa0366560:CDS 40.0%
CATGTATTGCTTGGAAGAAC+TGG + chr3_1:61438045-61438064 Msa0366560:CDS 40.0%
TCATTCTTAAGATGGCGTTC+TGG - chr3_1:61438117-61438136 None:intergenic 40.0%
GAACGCCATCTTAAGAATGA+TGG + chr3_1:61438117-61438136 Msa0366560:CDS 40.0%
CCGAACCATCATTCTTAAGA+TGG - chr3_1:61438125-61438144 None:intergenic 40.0%
! TTGCTTGGAAGAACTGGTCT+TGG + chr3_1:61438051-61438070 Msa0366560:CDS 45.0%
!! TGCTTGGAAGAACTGGTCTT+GGG + chr3_1:61438052-61438071 Msa0366560:CDS 45.0%
GTAGAACCAAGCATGATACC+AGG - chr3_1:61438210-61438229 None:intergenic 45.0%
TCCTTTAGTACAGGAAGGCG+TGG + chr3_1:61438180-61438199 Msa0366560:CDS 50.0%
GCCACGCCTTCCTGTACTAA+AGG - chr3_1:61438184-61438203 None:intergenic 55.0%
GGCTGTCCTGGTATCATGCT+TGG + chr3_1:61438201-61438220 Msa0366560:CDS 55.0%
! ACAGGAAGGCGTGGCTGTCC+TGG + chr3_1:61438189-61438208 Msa0366560:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 61437772 61438236 61437772 ID=Msa0366560;Name=Msa0366560
chr3_1 mRNA 61437772 61438236 61437772 ID=Msa0366560-mRNA-1;Parent=Msa0366560;Name=Msa0366560-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|154
chr3_1 exon 61437772 61438236 61437772 ID=Msa0366560-mRNA-1:exon:11897;Parent=Msa0366560-mRNA-1
chr3_1 CDS 61437772 61438236 61437772 ID=Msa0366560-mRNA-1:cds;Parent=Msa0366560-mRNA-1
Gene Sequence

>Msa0366560

ATGTTGGCATTCGTAGACAATCCATCAAACACAGTTGAATGGACATTGGCTGAAATGTTAAATCAACCTGAACTCTTTGAAAAAGTCATAGAAGAATTGGACAATATAGTTGGAAAAGATAGGATGGTCCAAGAATCCGATATTCCTAAACTCAATTTCTTGAAGGCTTGTGCAAGAGAAGCGTTTCGCCTCCATCCAATAACAGATTTCAATGCTCCCCATGTCTCTATAAATGATACAATGGTTGGAAATTACTTCATACCAAAGGGAAGTCATGTATTGCTTGGAAGAACTGGTCTTGGGAGAAATCCAAAAATTTGGAATGAACCTTACAAATACAAACCAGAACGCCATCTTAAGAATGATGGTTCGGATATAGCGTTGACAGAGCCAGAATTGAAGTTCATATCCTTTAGTACAGGAAGGCGTGGCTGTCCTGGTATCATGCTTGGTTCTACAATATAA
Protein sequence

>Msa0366560

MLAFVDNPSNTVEWTLAEMLNQPELFEKVIEELDNIVGKDRMVQESDIPKLNFLKACAREAFRLHPITDFNAPHVSINDTMVGNYFIPKGSHVLLGRTGLGRNPKIWNEPYKYKPERHLKNDGSDIALTEPELKFISFSTGRRGCPGIMLGSTI*