Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107720 | RHN46376.1 | 93.042 | 733 | 46 | 2 | 8 | 736 | 3 | 734 | 0.0 | 1408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107720 | sp|Q3U3T8|WDR62_MOUSE | 35.531 | 273 | 164 | 4 | 27 | 297 | 496 | 758 | 1.54e-44 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107720 | A0A396GZ16 | 93.042 | 733 | 46 | 2 | 8 | 736 | 3 | 734 | 0.0 | 1408 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0769390 | Msa1107720 | 0.817384 | 3.390805e-52 | -8.615850e-47 |
| Msa0832370 | Msa1107720 | 0.806521 | 7.899409e-50 | -8.615850e-47 |
| Msa0506530 | Msa1107720 | -0.810227 | 1.280076e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107720 | MtrunA17_Chr7g0241561 | 93.042 | 733 | 46 | 2 | 8 | 736 | 3 | 734 | 0.0 | 1408 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107720 | AT3G09080.2 | 43.534 | 464 | 228 | 10 | 8 | 447 | 200 | 653 | 1.91e-108 | 350 |
| Msa1107720 | AT3G09080.1 | 43.534 | 464 | 228 | 10 | 8 | 447 | 370 | 823 | 8.49e-107 | 349 |
| Msa1107720 | AT3G09080.3 | 43.534 | 464 | 228 | 10 | 8 | 447 | 447 | 900 | 4.86e-106 | 349 |
| Msa1107720 | AT3G09080.4 | 43.534 | 464 | 228 | 10 | 8 | 447 | 447 | 900 | 1.09e-105 | 347 |
Find 174 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTCTTAAAACAGTTTC+TGG | 0.137861 | 7_3:+49850720 | Msa1107720:three_prime_UTR |
| ACAATGAAGCTCACCTTTAT+AGG | 0.190492 | 7_3:-49845545 | None:intergenic |
| TCCATTGTCTTCTAAAATAT+TGG | 0.199444 | 7_3:+49846391 | Msa1107720:CDS |
| TACAATCATGATACTTCTTT+TGG | 0.212030 | 7_3:+49845518 | Msa1107720:CDS |
| CTTAAACTCGAGGAAATCTT+TGG | 0.222143 | 7_3:-49847555 | None:intergenic |
| AACTGCGAGGATCTGCTTTC+TGG | 0.233961 | 7_3:-49849917 | None:intergenic |
| TCAGATGGTATTTGAACTTC+TGG | 0.247197 | 7_3:-49847279 | None:intergenic |
| AGTAAATACTGTTGCTAGAT+TGG | 0.283546 | 7_3:+49850505 | Msa1107720:CDS |
| GGTATCTTTGAGCGACATTT+TGG | 0.288247 | 7_3:+49849268 | Msa1107720:CDS |
| ATCGACAGTTGAACTTTCTT+TGG | 0.292133 | 7_3:-49850258 | None:intergenic |
| CAATTTCCCCATATAGGTCT+TGG | 0.292900 | 7_3:-49843695 | None:intergenic |
| TGAACGCATGTAACTACTTT+TGG | 0.294670 | 7_3:-49850644 | None:intergenic |
| TCAAACAACTAACTTGATTC+TGG | 0.295573 | 7_3:-49850572 | None:intergenic |
| TAGATTTGCCAAAGGCTATT+AGG | 0.298274 | 7_3:+49850595 | Msa1107720:three_prime_UTR |
| CAACACCCATTTCCTCATTA+AGG | 0.299474 | 7_3:-49849087 | None:intergenic |
| TAAAATATTGGAGAAAATAA+TGG | 0.301668 | 7_3:+49846403 | Msa1107720:CDS |
| TGAGGAAATGGGTGTTGTTT+TGG | 0.303172 | 7_3:+49849093 | Msa1107720:CDS |
| TTGTCCACCCAAGACCTATA+TGG | 0.311366 | 7_3:+49843687 | Msa1107720:CDS |
| TAACCTTATGTGTATTTGAT+AGG | 0.316655 | 7_3:-49849294 | None:intergenic |
| AATGTAGGAAGAACAATAAC+TGG | 0.327629 | 7_3:+49850531 | Msa1107720:CDS |
| CTCTGTTTACACTGTTTGTA+TGG | 0.334541 | 7_3:+49847485 | Msa1107720:CDS |
| ATGAGGATGTCTGTTCATTA+AGG | 0.335057 | 7_3:+49846525 | Msa1107720:CDS |
| ATTTCCTCATTAAGGCTATT+AGG | 0.346821 | 7_3:-49849079 | None:intergenic |
| GGCGGTTACTTTCTTGCCTC+AGG | 0.348552 | 7_3:+49843723 | Msa1107720:CDS |
| TTCAGCATGTCCTGTGGCCT+TGG | 0.351235 | 7_3:-49845707 | None:intergenic |
| TAATAGCCTTAATGAGGAAA+TGG | 0.358145 | 7_3:+49849081 | Msa1107720:CDS |
| CAAGGAATTCATCAGTTAGA+AGG | 0.360511 | 7_3:+49849771 | Msa1107720:CDS |
| TTTACTTTCTCAACAATTAG+TGG | 0.369623 | 7_3:-49850488 | None:intergenic |
| TAAAATCATAAGGTTCTCTA+AGG | 0.370961 | 7_3:-49850945 | None:intergenic |
| TTCTATATACCAGCTTCCTT+TGG | 0.382382 | 7_3:-49850919 | None:intergenic |
| ATAATTTCAGCAACACTGAT+TGG | 0.394697 | 7_3:+49847448 | Msa1107720:intron |
| CTCAAGTACATTCTGCATCT+CGG | 0.396690 | 7_3:-49847523 | None:intergenic |
| CTACAAGCAGGAGGTTGATC+AGG | 0.397645 | 7_3:-49846455 | None:intergenic |
| GGCTTATTGCAGGACAAGAT+AGG | 0.397820 | 7_3:+49849023 | Msa1107720:intron |
| CGTATAGGATAAGAAGATAA+AGG | 0.398526 | 7_3:+49845460 | Msa1107720:intron |
| ATAATGTTAACAGGTTATAC+TGG | 0.401055 | 7_3:+49845603 | Msa1107720:intron |
| CAGTCGCATTTAGAAGAATC+TGG | 0.406363 | 7_3:+49849184 | Msa1107720:CDS |
| CATTGAGTGCTCACAGTCTC+TGG | 0.407864 | 7_3:-49847318 | None:intergenic |
| AAAAGAAGTATCATGATTGT+AGG | 0.410902 | 7_3:-49845516 | None:intergenic |
| ATCAGTTGCAGCTTCTTCCT+TGG | 0.412973 | 7_3:-49849888 | None:intergenic |
| TGTCCACCCAAGACCTATAT+GGG | 0.413174 | 7_3:+49843688 | Msa1107720:CDS |
| AATTTCCCCATATAGGTCTT+GGG | 0.414993 | 7_3:-49843694 | None:intergenic |
| CTTGCAGTTCACTCCCTTCA+CGG | 0.415683 | 7_3:-49850316 | None:intergenic |
| TCAAGTACATTCTGCATCTC+GGG | 0.415781 | 7_3:-49847522 | None:intergenic |
| TTGCTTCAACTTGTTTACTA+AGG | 0.419263 | 7_3:+49851121 | Msa1107720:three_prime_UTR |
| TGCTTTCTTGCATGCAGCTA+TGG | 0.421780 | 7_3:-49850342 | None:intergenic |
| AAGTTCAACTGTCGATCAGC+TGG | 0.422492 | 7_3:+49850265 | Msa1107720:CDS |
| TGAGCACTCAATGCTCTTCA+AGG | 0.424072 | 7_3:+49847328 | Msa1107720:CDS |
| ATCAGATTACACATGTTTGC+AGG | 0.425631 | 7_3:+49843530 | Msa1107720:CDS |
| CAAGAAAGCATTTGGTAGCT+TGG | 0.426350 | 7_3:+49850355 | Msa1107720:CDS |
| AGTGGGAAATTCTTGTGAAC+AGG | 0.428908 | 7_3:+49849955 | Msa1107720:CDS |
| GAAACTAAATGCTTGCAATC+AGG | 0.431295 | 7_3:-49845754 | None:intergenic |
| CAGATGGTATTTGAACTTCT+GGG | 0.434972 | 7_3:-49847278 | None:intergenic |
| CTAAAACTCCTAATAGCCTT+TGG | 0.435483 | 7_3:-49850603 | None:intergenic |
| ACAGTTGAACTTTCTTTGGC+AGG | 0.439991 | 7_3:-49850254 | None:intergenic |
| AATAACTGGGGCAGTAGATT+AGG | 0.445681 | 7_3:+49850545 | Msa1107720:CDS |
| TGCAAGATATACTGTACAAT+GGG | 0.450923 | 7_3:+49849799 | Msa1107720:CDS |
| TCCTTGGACCTCTTGCTACC+AGG | 0.451154 | 7_3:-49849872 | None:intergenic |
| AACAACTCTTGATGATAACT+TGG | 0.455191 | 7_3:+49849219 | Msa1107720:CDS |
| TTTGAAGGTTGTATATATGA+AGG | 0.455359 | 7_3:-49843506 | None:intergenic |
| TTGCTAGATTGGTTCAATGT+AGG | 0.456211 | 7_3:+49850516 | Msa1107720:CDS |
| GCTGCATGCAAGAAAGCATT+TGG | 0.458799 | 7_3:+49850347 | Msa1107720:CDS |
| TAATTTCAGCAACACTGATT+GGG | 0.458825 | 7_3:+49847449 | Msa1107720:intron |
| CGGCAGCGTTGGTAATCATT+CGG | 0.459681 | 7_3:+49843879 | Msa1107720:CDS |
| TTTATGAATTGTTGTAATTG+GGG | 0.464040 | 7_3:+49842156 | None:intergenic |
| GGACATGCTGAAATTGTTAC+TGG | 0.465204 | 7_3:+49845718 | Msa1107720:CDS |
| TGGCAACACGGAGACTAATA+AGG | 0.465357 | 7_3:+49845492 | Msa1107720:CDS |
| TATTAGGCTCAGAGGAGATC+TGG | 0.475656 | 7_3:-49849063 | None:intergenic |
| TCGCTTGCTGTTAGTTCAGA+TGG | 0.478979 | 7_3:+49843450 | Msa1107720:CDS |
| TCCTCAGTTGTAGTGCTGAT+AGG | 0.488016 | 7_3:+49843944 | Msa1107720:CDS |
| ATGTGTAATCTGATGTTTGA+AGG | 0.495657 | 7_3:-49843521 | None:intergenic |
| GACTGTTGTTACAGTTGGAC+AGG | 0.500200 | 7_3:+49845256 | Msa1107720:CDS |
| AAAGAGAGACAAAGCGGGAA+TGG | 0.503459 | 7_3:+49846548 | Msa1107720:CDS |
| ACATCAAGGAGAAAAGTTGA+TGG | 0.508851 | 7_3:+49850762 | Msa1107720:three_prime_UTR |
| TTTGATCTTATCGGCAGCGT+TGG | 0.509401 | 7_3:+49843868 | Msa1107720:CDS |
| CAGTTGAACTTTCTTTGGCA+GGG | 0.510123 | 7_3:-49850253 | None:intergenic |
| GGGGCTAGACCGAGATCAAA+AGG | 0.513222 | 7_3:+49850286 | Msa1107720:CDS |
| GGAGAAGAGGTTTCAAGTGA+TGG | 0.513703 | 7_3:+49850431 | Msa1107720:CDS |
| TGCATCTATGACTTTATGAC+TGG | 0.514521 | 7_3:+49845673 | Msa1107720:CDS |
| ACTGTACAATGGGATTATGC+AGG | 0.514624 | 7_3:+49849809 | Msa1107720:CDS |
| TGAGTCAAGAAGTCTAATCA+AGG | 0.515786 | 7_3:+49850809 | Msa1107720:three_prime_UTR |
| AATAGCCTTAATGAGGAAAT+GGG | 0.515892 | 7_3:+49849082 | Msa1107720:CDS |
| AAGCCTATCAAATACACATA+AGG | 0.516576 | 7_3:+49849291 | Msa1107720:CDS |
| TAGAAGCTGCGAAGAAGACT+CGG | 0.516594 | 7_3:+49850869 | Msa1107720:three_prime_UTR |
| GATGTAGTGATAGCAGATAA+TGG | 0.516870 | 7_3:+49845152 | Msa1107720:CDS |
| CAGTGTAAACAGAGCGCCAA+TGG | 0.520139 | 7_3:-49847476 | None:intergenic |
| CAAAAGGAAGGTGGCCGTGA+AGG | 0.522101 | 7_3:+49850302 | Msa1107720:CDS |
| ACACTGATTGGGACAACCAT+TGG | 0.524439 | 7_3:+49847460 | Msa1107720:CDS |
| TTTGCTGCAACATCGTCAAA+GGG | 0.525860 | 7_3:+49845184 | Msa1107720:CDS |
| CTTGATGTACAAAATTATCA+AGG | 0.525933 | 7_3:-49850747 | None:intergenic |
| AAAGCTTAATGTAAGAATCT+CGG | 0.527749 | 7_3:-49843661 | None:intergenic |
| ACTCAATGCTCTTCAAGGCC+TGG | 0.528529 | 7_3:+49847333 | Msa1107720:CDS |
| TATGTTTCTCCAAAGGAAGC+TGG | 0.530670 | 7_3:+49850910 | Msa1107720:three_prime_UTR |
| TGTGAGACTGTTGTTACAGT+TGG | 0.532123 | 7_3:+49845251 | Msa1107720:CDS |
| GTTCATGAAAATTGAAGAAG+TGG | 0.533521 | 7_3:+49849937 | Msa1107720:CDS |
| CTGTACAATGGGATTATGCA+GGG | 0.533764 | 7_3:+49849810 | Msa1107720:CDS |
| AGTTCAACTGTCGATCAGCT+GGG | 0.533910 | 7_3:+49850266 | Msa1107720:CDS |
| GAGATGGTTGCCAAGGCCAC+AGG | 0.538135 | 7_3:+49845697 | Msa1107720:CDS |
| GCGGTTACTTTCTTGCCTCA+GGG | 0.538919 | 7_3:+49843724 | Msa1107720:CDS |
| GGATCCTAGCTGCACATATG+TGG | 0.541304 | 7_3:+49845624 | Msa1107720:CDS |
| TGTATTCAGGTGGATGGTGA+TGG | 0.542188 | 7_3:+49846341 | Msa1107720:intron |
| TCTATTGCTGCAGTAAGTGC+TGG | 0.542654 | 7_3:+49843375 | Msa1107720:intron |
| AAGGTTTCCATTGCAATCAC+CGG | 0.543377 | 7_3:-49843487 | None:intergenic |
| GATGGAAAGCATCTTGCTGC+CGG | 0.544905 | 7_3:+49843468 | Msa1107720:CDS |
| CTGGCTGCAATAATGTCTGC+AGG | 0.545426 | 7_3:+49846660 | Msa1107720:CDS |
| CTGCAAGATATACTGTACAA+TGG | 0.545917 | 7_3:+49849798 | Msa1107720:CDS |
| GCTTATTGCAGGACAAGATA+GGG | 0.546829 | 7_3:+49849024 | Msa1107720:intron |
| CTACCAGGCATATTTCTGAC+AGG | 0.548372 | 7_3:-49849857 | None:intergenic |
| TTATTATGTATTCAGGTGGA+TGG | 0.549113 | 7_3:+49846335 | Msa1107720:intron |
| GACTGGAGAGATGGTTGCCA+AGG | 0.551104 | 7_3:+49845690 | Msa1107720:CDS |
| CTATATGGGGAAATTGCAAA+AGG | 0.551972 | 7_3:+49843702 | Msa1107720:CDS |
| GAAATACTATATTTAAAAGA+CGG | 0.553250 | 7_3:-49846605 | None:intergenic |
| AAAAGGAAGGTGGCCGTGAA+GGG | 0.554186 | 7_3:+49850303 | Msa1107720:CDS |
| TCAGGGATTCTCAAAGGCAA+TGG | 0.554511 | 7_3:-49846437 | None:intergenic |
| CATAAAGTCATAGATGCAGA+TGG | 0.572530 | 7_3:-49845668 | None:intergenic |
| ATATAGGTCTTGGGTGGACA+AGG | 0.575310 | 7_3:-49843685 | None:intergenic |
| ATGTACAAAATTATCAAGGA+AGG | 0.578459 | 7_3:-49850743 | None:intergenic |
| ATAATATTCTGCATGAGACT+AGG | 0.583273 | 7_3:-49850680 | None:intergenic |
| TGACTTTATGACTGGAGAGA+TGG | 0.583546 | 7_3:+49845681 | Msa1107720:CDS |
| TGAGCCTAATAGCCTTAATG+AGG | 0.583962 | 7_3:+49849075 | Msa1107720:CDS |
| TGGGCACAAGCAAAAGTGAC+TGG | 0.586688 | 7_3:+49846641 | Msa1107720:CDS |
| ACCTTTCAGCATCATAGAGA+TGG | 0.588485 | 7_3:-49843764 | None:intergenic |
| AGTCCTGTCAGAAATATGCC+TGG | 0.588585 | 7_3:+49849854 | Msa1107720:CDS |
| GTCTCTCACAGAAATCACTT+TGG | 0.590049 | 7_3:-49850845 | None:intergenic |
| GATAAAGAAGCATGATCAGA+TGG | 0.592204 | 7_3:-49847294 | None:intergenic |
| ACCTATCAGCACTACAACTG+AGG | 0.592583 | 7_3:-49843945 | None:intergenic |
| AAGCGATCGAAATTCTTGAC+TGG | 0.593246 | 7_3:-49843433 | None:intergenic |
| TATTTCAAGACTTCCCAGAT+GGG | 0.594719 | 7_3:+49846622 | Msa1107720:CDS |
| CTTGCTGCCGGTGATTGCAA+TGG | 0.595392 | 7_3:+49843480 | Msa1107720:CDS |
| TACAAGCAGGAGGTTGATCA+GGG | 0.595793 | 7_3:-49846454 | None:intergenic |
| GTATTTCAAGACTTCCCAGA+TGG | 0.596643 | 7_3:+49846621 | Msa1107720:CDS |
| CAGACCACATATGTGCAGCT+AGG | 0.597483 | 7_3:-49845628 | None:intergenic |
| CGGTTACTTTCTTGCCTCAG+GGG | 0.598275 | 7_3:+49843725 | Msa1107720:CDS |
| AGATGGTATTTGAACTTCTG+GGG | 0.604720 | 7_3:-49847277 | None:intergenic |
| ATGTAGGAAGAACAATAACT+GGG | 0.606071 | 7_3:+49850532 | Msa1107720:CDS |
| GATGATAGATGACTACAAGC+AGG | 0.606675 | 7_3:-49846467 | None:intergenic |
| TTCCCCATATAGGTCTTGGG+TGG | 0.608409 | 7_3:-49843691 | None:intergenic |
| AACTGTTTATGACATGGCTG+TGG | 0.609536 | 7_3:+49845220 | Msa1107720:CDS |
| GTCCAACTTACTTAAACTCG+AGG | 0.609721 | 7_3:-49847565 | None:intergenic |
| GGTTACTTTCTTGCCTCAGG+GGG | 0.610004 | 7_3:+49843726 | Msa1107720:CDS |
| AACAATTTCAGCATGTCCTG+TGG | 0.610254 | 7_3:-49845713 | None:intergenic |
| TCAAAATCCAAATCTAGTGA+AGG | 0.612849 | 7_3:+49851162 | Msa1107720:three_prime_UTR |
| TTGTTTGATAGATTTGCCAA+AGG | 0.613093 | 7_3:+49850587 | Msa1107720:three_prime_UTR |
| GCTTACTTGAAAGTACCTCC+AGG | 0.615749 | 7_3:-49847351 | None:intergenic |
| TATGTGCACAGATGGAGTCA+AGG | 0.617083 | 7_3:+49849753 | Msa1107720:intron |
| CAAGTACATTCTGCATCTCG+GGG | 0.617491 | 7_3:-49847521 | None:intergenic |
| CGTCAAAGGGCTTCACAATG+TGG | 0.618074 | 7_3:+49845197 | Msa1107720:CDS |
| TCATCTATCATCTTGCAAAG+AGG | 0.618600 | 7_3:+49846478 | Msa1107720:CDS |
| GCCTGGTAGCAAGAGGTCCA+AGG | 0.620099 | 7_3:+49849871 | Msa1107720:CDS |
| TTCATGAAAATTGAAGAAGT+GGG | 0.626281 | 7_3:+49849938 | Msa1107720:CDS |
| TGCAGAATGTACTTGAGACA+AGG | 0.627302 | 7_3:+49847529 | Msa1107720:CDS |
| GGTTGATCAGGGATTCTCAA+AGG | 0.630243 | 7_3:-49846443 | None:intergenic |
| TAAGGAAAGAGAGACAAAGC+GGG | 0.631051 | 7_3:+49846543 | Msa1107720:CDS |
| GAAATATGCCTGGTAGCAAG+AGG | 0.634055 | 7_3:+49849864 | Msa1107720:CDS |
| GAAGATAAAGGCATTTGACA+TGG | 0.638629 | 7_3:+49845472 | Msa1107720:CDS |
| CTAGACCGAGATCAAAAGGA+AGG | 0.640558 | 7_3:+49850290 | Msa1107720:CDS |
| TCACTACATCATGAAGCACC+AGG | 0.643802 | 7_3:-49845139 | None:intergenic |
| TGTTAGTGACACTTCATCAG+AGG | 0.654455 | 7_3:+49846685 | Msa1107720:CDS |
| GTTCAACTGTCGATCAGCTG+GGG | 0.656637 | 7_3:+49850267 | Msa1107720:CDS |
| CAATGCTCTTCAAGGCCTGG+AGG | 0.661175 | 7_3:+49847336 | Msa1107720:CDS |
| TCCATCTCTATGATGCTGAA+AGG | 0.662432 | 7_3:+49843763 | Msa1107720:CDS |
| GACCGAGATCAAAAGGAAGG+TGG | 0.663094 | 7_3:+49850293 | Msa1107720:CDS |
| AGGCATTTGACATGGCAACA+CGG | 0.681320 | 7_3:+49845480 | Msa1107720:CDS |
| GCATTGCAAGATCAATCATG+AGG | 0.682215 | 7_3:+49846508 | Msa1107720:CDS |
| CTGCGCTGTGAAGAAGAGAG+TGG | 0.682288 | 7_3:+49849247 | Msa1107720:CDS |
| ATTAAGGCTATTAGGCTCAG+AGG | 0.690475 | 7_3:-49849071 | None:intergenic |
| GATAGATGACTACAAGCAGG+AGG | 0.690545 | 7_3:-49846464 | None:intergenic |
| TATGGGGAAATTGCAAAAGG+CGG | 0.694477 | 7_3:+49843705 | Msa1107720:CDS |
| GTCCACCCAAGACCTATATG+GGG | 0.697224 | 7_3:+49843689 | Msa1107720:CDS |
| TGTACAATGGGATTATGCAG+GGG | 0.700074 | 7_3:+49849811 | Msa1107720:CDS |
| TTAAGGAAAGAGAGACAAAG+CGG | 0.708657 | 7_3:+49846542 | Msa1107720:CDS |
| ATGTGGAACTGTTTATGACA+TGG | 0.713027 | 7_3:+49845214 | Msa1107720:CDS |
| AAGTACATTCTGCATCTCGG+GGG | 0.725744 | 7_3:-49847520 | None:intergenic |
| TGTAGGAAGAACAATAACTG+GGG | 0.750993 | 7_3:+49850533 | Msa1107720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTATTTTATTT+TGG | + | chr7_3:49851056-49851075 | Msa1107720:intron | 0.0% |
| !!! | TTTATTTTTTATTTTATTTT+GGG | + | chr7_3:49851057-49851076 | Msa1107720:intron | 0.0% |
| !!! | TCTGATTTTAAAAAAAAATA+TGG | - | chr7_3:49845863-49845882 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTTTTTTTG+TGG | + | chr7_3:49847396-49847415 | Msa1107720:intron | 10.0% |
| !!! | ATAGTTTAATTTTTAGAAAT+TGG | + | chr7_3:49848200-49848219 | Msa1107720:intron | 10.0% |
| !!! | TGAAAAAAAAAGTAATTTTA+AGG | - | chr7_3:49848616-49848635 | None:intergenic | 10.0% |
| !!! | TTGAATTTAGAATATAATTT+TGG | + | chr7_3:49849444-49849463 | Msa1107720:intron | 10.0% |
| !!! | TTTAAGTTTCTAAAAGAAAA+GGG | - | chr7_3:49842755-49842774 | None:intergenic | 15.0% |
| !!! | ATTTAAGTTTCTAAAAGAAA+AGG | - | chr7_3:49842756-49842775 | None:intergenic | 15.0% |
| !!! | TTTCTTTTAGAAACTTAAAT+AGG | + | chr7_3:49842756-49842775 | Msa1107720:intron | 15.0% |
| !!! | ATTTCTTTTTGTAAATTTAG+AGG | + | chr7_3:49842991-49843010 | Msa1107720:intron | 15.0% |
| !!! | TTTCTTTTTGTAAATTTAGA+GGG | + | chr7_3:49842992-49843011 | Msa1107720:intron | 15.0% |
| !! | AAAATTATATTGATGTGATA+TGG | - | chr7_3:49843255-49843274 | None:intergenic | 15.0% |
| !! | GAAACAAAAAAAAAATTGAA+TGG | + | chr7_3:49844005-49844024 | Msa1107720:intron | 15.0% |
| !!! | AATTTTTAGTTCTTCATTAT+TGG | + | chr7_3:49844248-49844267 | Msa1107720:intron | 15.0% |
| !!! | TTTTCTTCAAATGAAAAATT+AGG | - | chr7_3:49844799-49844818 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAATAATGGATAC+AGG | + | chr7_3:49844877-49844896 | Msa1107720:intron | 15.0% |
| !!! | ACATGTTTTAAAATTTACTT+GGG | - | chr7_3:49845354-49845373 | None:intergenic | 15.0% |
| !! | TTAGGAAATTAAAATCAATA+TGG | + | chr7_3:49846140-49846159 | Msa1107720:intron | 15.0% |
| !!! | GTTAATAATTTTTTTGTTGA+TGG | - | chr7_3:49846315-49846334 | None:intergenic | 15.0% |
| !! | TATTAACTTATTATGTATTC+AGG | + | chr7_3:49846328-49846347 | Msa1107720:intron | 15.0% |
| !! | TAAAATATTGGAGAAAATAA+TGG | + | chr7_3:49846403-49846422 | Msa1107720:CDS | 15.0% |
| !! | GAAATACTATATTTAAAAGA+CGG | - | chr7_3:49846608-49846627 | None:intergenic | 15.0% |
| !!! | ATATTTTACTAGATTGTTTT+TGG | + | chr7_3:49848290-49848309 | Msa1107720:intron | 15.0% |
| !!! | AAATTTCAATAAGCTTTTTA+TGG | + | chr7_3:49848316-49848335 | Msa1107720:intron | 15.0% |
| !!! | CTCTATTTGATTTTTATAAA+AGG | - | chr7_3:49848504-49848523 | None:intergenic | 15.0% |
| !!! | ATCAAATAGAGATTATTTTT+AGG | + | chr7_3:49848513-49848532 | Msa1107720:intron | 15.0% |
| !! | TAATTAATACTCTTGAAAAA+AGG | - | chr7_3:49848561-49848580 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTAACTTAATACT+TGG | + | chr7_3:49848766-49848785 | Msa1107720:intron | 15.0% |
| !!! | TTTGTTTTAACTTAATACTT+GGG | + | chr7_3:49848767-49848786 | Msa1107720:intron | 15.0% |
| !!! | CAATGACTATATTTAATTTT+AGG | + | chr7_3:49849327-49849346 | Msa1107720:intron | 15.0% |
| !!! | ATAAAGAAGAAATTTTAACA+TGG | + | chr7_3:49849365-49849384 | Msa1107720:intron | 15.0% |
| !!! | TAAAGAAGAAATTTTAACAT+GGG | + | chr7_3:49849366-49849385 | Msa1107720:intron | 15.0% |
| !!! | GTTTTATTTAAAAGTTATCT+TGG | + | chr7_3:49849491-49849510 | Msa1107720:intron | 15.0% |
| !! | TCAAAATTAGAAAAAAGTTA+CGG | + | chr7_3:49850410-49850429 | Msa1107720:CDS | 15.0% |
| !!! | TTGTATTGTTTATGTTTTGA+AGG | + | chr7_3:49842205-49842224 | Msa1107720:intron | 20.0% |
| !!! | TGTATTGTTTATGTTTTGAA+GGG | + | chr7_3:49842206-49842225 | Msa1107720:intron | 20.0% |
| !! | CATCAAATCAATATTCTTTA+TGG | - | chr7_3:49842345-49842364 | None:intergenic | 20.0% |
| !!! | CATAAAGAATATTGATTTGA+TGG | + | chr7_3:49842343-49842362 | Msa1107720:intron | 20.0% |
| !!! | GGTTTTTTTTATTGTTGTTA+TGG | + | chr7_3:49842364-49842383 | Msa1107720:intron | 20.0% |
| !!! | TTTTTATTGTTGTTATGGAA+TGG | + | chr7_3:49842369-49842388 | Msa1107720:intron | 20.0% |
| !! | AAAACTTAAGAATGAACTAT+TGG | + | chr7_3:49842464-49842483 | Msa1107720:intron | 20.0% |
| !! | AAACTTAAGAATGAACTATT+GGG | + | chr7_3:49842465-49842484 | Msa1107720:intron | 20.0% |
| !!! | ATTTGAAGCTAGAAAATTTA+CGG | + | chr7_3:49842571-49842590 | Msa1107720:intron | 20.0% |
| !!! | CAGATTCTTTTCTAAATTAT+AGG | - | chr7_3:49842682-49842701 | None:intergenic | 20.0% |
| !!! | TTAAGTTTCTAAAAGAAAAG+GGG | - | chr7_3:49842754-49842773 | None:intergenic | 20.0% |
| !!! | AATTTAGAGGGAATTTTAAT+AGG | + | chr7_3:49843004-49843023 | Msa1107720:intron | 20.0% |
| !! | GTTTGTTTGCTTATTTAATT+AGG | + | chr7_3:49843155-49843174 | Msa1107720:intron | 20.0% |
| !! | GTCTAGTATTAGTAAAAATA+AGG | + | chr7_3:49843188-49843207 | Msa1107720:intron | 20.0% |
| !! | CAATAACTTTAAATAGATTC+AGG | - | chr7_3:49843568-49843587 | None:intergenic | 20.0% |
| !!! | GAAGAACTAAAAATTTGTTT+TGG | - | chr7_3:49844243-49844262 | None:intergenic | 20.0% |
| !!! | TATTTTCAGTTGATTTGAAA+TGG | + | chr7_3:49844642-49844661 | Msa1107720:intron | 20.0% |
| !!! | GAAGCAGTTTTAAAAAATAA+TGG | + | chr7_3:49844870-49844889 | Msa1107720:intron | 20.0% |
| !!! | GACATGTTTTAAAATTTACT+TGG | - | chr7_3:49845355-49845374 | None:intergenic | 20.0% |
| !! | AATTACATTATCATACGTAT+AGG | + | chr7_3:49845445-49845464 | Msa1107720:intron | 20.0% |
| !! | CAAATTAAATAAAAGGCAAA+AGG | - | chr7_3:49845838-49845857 | None:intergenic | 20.0% |
| !!! | CTTTTGCCTTTTATTTAATT+TGG | + | chr7_3:49845836-49845855 | Msa1107720:intron | 20.0% |
| !! | TATGGACCAAATTAAATAAA+AGG | - | chr7_3:49845845-49845864 | None:intergenic | 20.0% |
| !!! | ATGATTTTCAAGTAAACTAA+CGG | + | chr7_3:49846031-49846050 | Msa1107720:intron | 20.0% |
| !!! | AATTATCTATAGTTTGAAAC+TGG | + | chr7_3:49846917-49846936 | Msa1107720:intron | 20.0% |
| !!! | AATTTTAACTTCTACAAATG+AGG | - | chr7_3:49847042-49847061 | None:intergenic | 20.0% |
| !!! | TTGTTTTGATAATTGAAATC+CGG | + | chr7_3:49847969-49847988 | Msa1107720:intron | 20.0% |
| !! | TAAAAAATCACTTATGACAT+AGG | - | chr7_3:49848349-49848368 | None:intergenic | 20.0% |
| !!! | TTTTGTAGATTCTGAATATA+TGG | + | chr7_3:49848430-49848449 | Msa1107720:intron | 20.0% |
| !!! | ATTTTTAGGTCCTAATTATA+AGG | + | chr7_3:49848527-49848546 | Msa1107720:intron | 20.0% |
| !! | GGTATTTATTCCTTATAATT+AGG | - | chr7_3:49848540-49848559 | None:intergenic | 20.0% |
| !!! | AATTATTAGAACACCTTTTA+TGG | + | chr7_3:49848576-49848595 | Msa1107720:intron | 20.0% |
| !! | AATATAAATGATGCCATAAA+AGG | - | chr7_3:49848592-49848611 | None:intergenic | 20.0% |
| !!! | TACTTTTTTTTTCATGAGAA+TGG | + | chr7_3:49848622-49848641 | Msa1107720:intron | 20.0% |
| !! | AAAAAAAAATTAACTGTAGC+TGG | + | chr7_3:49848902-49848921 | Msa1107720:intron | 20.0% |
| !! | AGTAAAAATAATGATTCTTC+TGG | + | chr7_3:49849127-49849146 | Msa1107720:CDS | 20.0% |
| !! | GTAAAAATAATGATTCTTCT+GGG | + | chr7_3:49849128-49849147 | Msa1107720:CDS | 20.0% |
| !!! | TATAATTTTGGTAATACAAC+TGG | + | chr7_3:49849456-49849475 | Msa1107720:intron | 20.0% |
| !! | ATTTAGAAATGAGAAAATCT+TGG | - | chr7_3:49849605-49849624 | None:intergenic | 20.0% |
| !!! | TCTATTGTAGAGTATTAAAA+TGG | - | chr7_3:49850148-49850167 | None:intergenic | 20.0% |
| !! | CAGGTAAAAATAAAATCATA+AGG | - | chr7_3:49850958-49850977 | None:intergenic | 20.0% |
| ! | GGTATATTGTATTGTATGTT+GGG | + | chr7_3:49842177-49842196 | Msa1107720:intron | 25.0% |
| ! | GTATATTGTATTGTATGTTG+GGG | + | chr7_3:49842178-49842197 | Msa1107720:intron | 25.0% |
| ! | TTATATTGGATTGATTGATG+TGG | + | chr7_3:49842277-49842296 | Msa1107720:intron | 25.0% |
| !! | TAAGTTTCTAAAAGAAAAGG+GGG | - | chr7_3:49842753-49842772 | None:intergenic | 25.0% |
| ! | AAACAAGGGATAAATTCAAA+TGG | + | chr7_3:49842793-49842812 | Msa1107720:intron | 25.0% |
| ! | CAAACAAACTGCAATATATT+AGG | - | chr7_3:49843144-49843163 | None:intergenic | 25.0% |
| ! | TTTGAAGGTTGTATATATGA+AGG | - | chr7_3:49843509-49843528 | None:intergenic | 25.0% |
| ! | AAAGCTTAATGTAAGAATCT+CGG | - | chr7_3:49843664-49843683 | None:intergenic | 25.0% |
| !! | GTTTTATAGGCTAACTTTAT+TGG | + | chr7_3:49843797-49843816 | Msa1107720:intron | 25.0% |
| !!! | TGCAGAAATTTTGATCTTAT+CGG | + | chr7_3:49843859-49843878 | Msa1107720:intron | 25.0% |
| ! | TTGCTGATCAATTGAATAAA+AGG | + | chr7_3:49844040-49844059 | Msa1107720:intron | 25.0% |
| ! | TATGGCTCATTATTACAATT+AGG | + | chr7_3:49844138-49844157 | Msa1107720:intron | 25.0% |
| ! | ATGAGTCATCGAATAAAAAA+GGG | - | chr7_3:49844428-49844447 | None:intergenic | 25.0% |
| !! | CATAGAAACTTTTCAAACAT+GGG | - | chr7_3:49844737-49844756 | None:intergenic | 25.0% |
| !! | TCATAGAAACTTTTCAAACA+TGG | - | chr7_3:49844738-49844757 | None:intergenic | 25.0% |
| ! | AACTAATCAATGGTTCAAAT+GGG | - | chr7_3:49844822-49844841 | None:intergenic | 25.0% |
| ! | TAACTAATCAATGGTTCAAA+TGG | - | chr7_3:49844823-49844842 | None:intergenic | 25.0% |
| ! | ATTATCAGGTAACTAATCAA+TGG | - | chr7_3:49844832-49844851 | None:intergenic | 25.0% |
| !!! | TAGAACACAAGTCTTATTTT+TGG | + | chr7_3:49844961-49844980 | Msa1107720:intron | 25.0% |
| ! | ATGCCATTAAAGTAATGTTA+GGG | - | chr7_3:49845070-49845089 | None:intergenic | 25.0% |
| ! | AATGCCATTAAAGTAATGTT+AGG | - | chr7_3:49845071-49845090 | None:intergenic | 25.0% |
| ! | AAGGATTATGTTAATTACAG+AGG | - | chr7_3:49845103-49845122 | None:intergenic | 25.0% |
| ! | ATACTCATTTCAAAGTTCAT+GGG | + | chr7_3:49845303-49845322 | Msa1107720:intron | 25.0% |
| !!! | AAAAGAAGTATCATGATTGT+AGG | - | chr7_3:49845519-49845538 | None:intergenic | 25.0% |
| !! | TACAATCATGATACTTCTTT+TGG | + | chr7_3:49845518-49845537 | Msa1107720:CDS | 25.0% |
| ! | GATTGTAGATATTCTTTATC+AGG | + | chr7_3:49845575-49845594 | Msa1107720:intron | 25.0% |
| ! | ATAATGTTAACAGGTTATAC+TGG | + | chr7_3:49845603-49845622 | Msa1107720:intron | 25.0% |
| !! | TTTAAAATCAGAACATCCAA+TGG | + | chr7_3:49845871-49845890 | Msa1107720:intron | 25.0% |
| ! | AGAGTAGCTATATATAATGA+AGG | - | chr7_3:49845953-49845972 | None:intergenic | 25.0% |
| !! | ATATATTTGAGACATACCAT+TGG | - | chr7_3:49846073-49846092 | None:intergenic | 25.0% |
| ! | TAACTTATTATGTATTCAGG+TGG | + | chr7_3:49846331-49846350 | Msa1107720:intron | 25.0% |
| !!! | TCCATTGTCTTCTAAAATAT+TGG | + | chr7_3:49846391-49846410 | Msa1107720:CDS | 25.0% |
| !!! | TCCAATATTTTAGAAGACAA+TGG | - | chr7_3:49846395-49846414 | None:intergenic | 25.0% |
| !! | TTCTACATGTTTGAAATTGT+GGG | - | chr7_3:49846777-49846796 | None:intergenic | 25.0% |
| ! | TATTCCAAATATGTTTCCAT+AGG | - | chr7_3:49846811-49846830 | None:intergenic | 25.0% |
| !! | ATGGAAACATATTTGGAATA+TGG | + | chr7_3:49846811-49846830 | Msa1107720:intron | 25.0% |
| ! | GTATATATCATCATTGTAGA+GGG | + | chr7_3:49846888-49846907 | Msa1107720:intron | 25.0% |
| !!! | TTTGAAACTGGCATTTTAAT+TGG | + | chr7_3:49846929-49846948 | Msa1107720:intron | 25.0% |
| !!! | TTTTTGAAGCTTCTAATGTA+AGG | + | chr7_3:49847073-49847092 | Msa1107720:intron | 25.0% |
| !!! | TTTTGAAGCTTCTAATGTAA+GGG | + | chr7_3:49847074-49847093 | Msa1107720:intron | 25.0% |
| ! | TCAATGCAAGAAATATTAGA+GGG | - | chr7_3:49847231-49847250 | None:intergenic | 25.0% |
| ! | ATCAATGCAAGAAATATTAG+AGG | - | chr7_3:49847232-49847251 | None:intergenic | 25.0% |
| !! | CATGATTTAAGATTAAGACT+CGG | - | chr7_3:49847378-49847397 | None:intergenic | 25.0% |
| !!! | TTTTGATGACAAAAATGTTC+TGG | + | chr7_3:49847692-49847711 | Msa1107720:intron | 25.0% |
| ! | TTGAATGCACCTATATATAA+TGG | + | chr7_3:49847748-49847767 | Msa1107720:intron | 25.0% |
| !!! | ACCTATATATAATGGACTTT+TGG | + | chr7_3:49847756-49847775 | Msa1107720:intron | 25.0% |
| ! | ACCAAAAGTCCATTATATAT+AGG | - | chr7_3:49847760-49847779 | None:intergenic | 25.0% |
| ! | TTAAAGAAACACAAGAATAC+AGG | + | chr7_3:49848176-49848195 | Msa1107720:intron | 25.0% |
| ! | TAAGTAAATATGTCAATGAG+AGG | - | chr7_3:49848253-49848272 | None:intergenic | 25.0% |
| ! | TCTCATTGACATATTTACTT+AGG | + | chr7_3:49848252-49848271 | Msa1107720:intron | 25.0% |
| ! | CTCATTGACATATTTACTTA+GGG | + | chr7_3:49848253-49848272 | Msa1107720:intron | 25.0% |
| ! | TCATTGACATATTTACTTAG+GGG | + | chr7_3:49848254-49848273 | Msa1107720:intron | 25.0% |
| !! | TTCAATAAGCTTTTTATGGA+TGG | + | chr7_3:49848320-49848339 | Msa1107720:intron | 25.0% |
| !! | TCAATAAGCTTTTTATGGAT+GGG | + | chr7_3:49848321-49848340 | Msa1107720:intron | 25.0% |
| ! | TATTCAGAATCTACAAAAGT+GGG | - | chr7_3:49848428-49848447 | None:intergenic | 25.0% |
| ! | ATATTCAGAATCTACAAAAG+TGG | - | chr7_3:49848429-49848448 | None:intergenic | 25.0% |
| !!! | AAATGTTGATTTGCTCATAT+TGG | - | chr7_3:49848466-49848485 | None:intergenic | 25.0% |
| !! | ATTTTTATAAAAGGACCAGA+GGG | - | chr7_3:49848495-49848514 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCATGAGAATGG+AGG | + | chr7_3:49848625-49848644 | Msa1107720:intron | 25.0% |
| !! | TAACTCTTTTAAATACACCT+TGG | + | chr7_3:49848692-49848711 | Msa1107720:intron | 25.0% |
| !!! | TTTTAACTTAATACTTGGGT+TGG | + | chr7_3:49848771-49848790 | Msa1107720:intron | 25.0% |
| ! | TAACCTTATGTGTATTTGAT+AGG | - | chr7_3:49849297-49849316 | None:intergenic | 25.0% |
| ! | TCATAAATATCATCTCAGTA+AGG | - | chr7_3:49849547-49849566 | None:intergenic | 25.0% |
| ! | TTCATGAAAATTGAAGAAGT+GGG | + | chr7_3:49849938-49849957 | Msa1107720:CDS | 25.0% |
| ! | TAGGACATAGGTTTATAAAT+TGG | - | chr7_3:49849994-49850013 | None:intergenic | 25.0% |
| ! | TAAACCAAATTGATTGCAAA+AGG | - | chr7_3:49850017-49850036 | None:intergenic | 25.0% |
| !! | TGTAGAGTATTAAAATGGAA+AGG | - | chr7_3:49850143-49850162 | None:intergenic | 25.0% |
| ! | CAGCATCATTTAAAAATTGA+AGG | - | chr7_3:49850457-49850476 | None:intergenic | 25.0% |
| ! | TTTACTTTCTCAACAATTAG+TGG | - | chr7_3:49850491-49850510 | None:intergenic | 25.0% |
| ! | AAACTTCTTAAAACAGTTTC+TGG | + | chr7_3:49850720-49850739 | Msa1107720:three_prime_UTR | 25.0% |
| ! | ATGTACAAAATTATCAAGGA+AGG | - | chr7_3:49850746-49850765 | None:intergenic | 25.0% |
| ! | CTTGATGTACAAAATTATCA+AGG | - | chr7_3:49850750-49850769 | None:intergenic | 25.0% |
| !!! | CTTGATAATTTTGTACATCA+AGG | + | chr7_3:49850748-49850767 | Msa1107720:three_prime_UTR | 25.0% |
| ! | TAAAATCATAAGGTTCTCTA+AGG | - | chr7_3:49850948-49850967 | None:intergenic | 25.0% |
| ! | GAGTAACATTCATTATAAAG+AGG | - | chr7_3:49851006-49851025 | None:intergenic | 25.0% |
| GGGTATATTGTATTGTATGT+TGG | + | chr7_3:49842176-49842195 | Msa1107720:intron | 30.0% | |
| CATGGAAACTTTGGTTATAT+TGG | + | chr7_3:49842263-49842282 | Msa1107720:intron | 30.0% | |
| TGTTGTTATGGAATGGAAAA+TGG | + | chr7_3:49842376-49842395 | Msa1107720:intron | 30.0% | |
| ! | AAGTTTCTAAAAGAAAAGGG+GGG | - | chr7_3:49842752-49842771 | None:intergenic | 30.0% |
| ATGATCTTTCATTATGTCCT+AGG | + | chr7_3:49843102-49843121 | Msa1107720:intron | 30.0% | |
| GAACTATAAAAAGCAATCCT+AGG | - | chr7_3:49843122-49843141 | None:intergenic | 30.0% | |
| CTTTCTTACATAAGACAAAG+TGG | - | chr7_3:49843218-49843237 | None:intergenic | 30.0% | |
| !! | AAGAAGTTGTTGGTGTTATA+GGG | - | chr7_3:49843323-49843342 | None:intergenic | 30.0% |
| !! | TAAGAAGTTGTTGGTGTTAT+AGG | - | chr7_3:49843324-49843343 | None:intergenic | 30.0% |
| ATGTGTAATCTGATGTTTGA+AGG | - | chr7_3:49843524-49843543 | None:intergenic | 30.0% | |
| TTTATCCTGCATATTGTTTC+AGG | + | chr7_3:49843626-49843645 | Msa1107720:intron | 30.0% | |
| TTATCCTGCATATTGTTTCA+GGG | + | chr7_3:49843627-49843646 | Msa1107720:intron | 30.0% | |
| TAGGTATGTTAACATAGGTT+CGG | + | chr7_3:49843963-49843982 | Msa1107720:intron | 30.0% | |
| ! | GAAACAGAAGTTTTACATAG+AGG | + | chr7_3:49844062-49844081 | Msa1107720:intron | 30.0% |
| !! | ATAGAGGTTCTAACTTTTTG+TGG | + | chr7_3:49844078-49844097 | Msa1107720:intron | 30.0% |
| TGAACTTTAACAACCTCTTA+TGG | + | chr7_3:49844120-49844139 | Msa1107720:intron | 30.0% | |
| TTGTAATAATGAGCCATAAG+AGG | - | chr7_3:49844136-49844155 | None:intergenic | 30.0% | |
| CTTCAGTAATACTTGTCAAT+CGG | - | chr7_3:49844188-49844207 | None:intergenic | 30.0% | |
| TTACTGAAGTCAAAATGTAC+TGG | + | chr7_3:49844199-49844218 | Msa1107720:intron | 30.0% | |
| TACTGAAGTCAAAATGTACT+GGG | + | chr7_3:49844200-49844219 | Msa1107720:intron | 30.0% | |
| GATGAGTCATCGAATAAAAA+AGG | - | chr7_3:49844429-49844448 | None:intergenic | 30.0% | |
| TAATGTTGAGCATGTTCTTT+AGG | + | chr7_3:49844848-49844867 | Msa1107720:intron | 30.0% | |
| CTTTAAACTGCAAATTCCAT+TGG | - | chr7_3:49844903-49844922 | None:intergenic | 30.0% | |
| AAAGTAGTCTATGCATTGTT+TGG | + | chr7_3:49844919-49844938 | Msa1107720:intron | 30.0% | |
| !! | TTTTGGTTAAGTTTCTCCTT+TGG | + | chr7_3:49844978-49844997 | Msa1107720:intron | 30.0% |
| AGGAAACTGTGTACTAAAAA+AGG | - | chr7_3:49845122-49845141 | None:intergenic | 30.0% | |
| !!! | TTTTTTAGTACACAGTTTCC+TGG | + | chr7_3:49845121-49845140 | Msa1107720:intron | 30.0% |
| !! | AACTTTGAAATGAGTATCAC+TGG | - | chr7_3:49845300-49845319 | None:intergenic | 30.0% |
| GATACTCATTTCAAAGTTCA+TGG | + | chr7_3:49845302-49845321 | Msa1107720:intron | 30.0% | |
| CGTATAGGATAAGAAGATAA+AGG | + | chr7_3:49845460-49845479 | Msa1107720:intron | 30.0% | |
| !! | TTCTTTTGGAGAACCTATAA+AGG | + | chr7_3:49845532-49845551 | Msa1107720:CDS | 30.0% |
| CTACATAATTAACAAGCCAA+TGG | + | chr7_3:49846054-49846073 | Msa1107720:intron | 30.0% | |
| GGTATGTCTCAAATATATCA+AGG | + | chr7_3:49846075-49846094 | Msa1107720:intron | 30.0% | |
| ! | TTTAATTTCCTAATGCGACT+TGG | - | chr7_3:49846133-49846152 | None:intergenic | 30.0% |
| TTATTATGTATTCAGGTGGA+TGG | + | chr7_3:49846335-49846354 | Msa1107720:intron | 30.0% | |
| !! | ATTTTAGAAGACAATGGAGT+GGG | - | chr7_3:49846389-49846408 | None:intergenic | 30.0% |
| !! | TATTTTAGAAGACAATGGAG+TGG | - | chr7_3:49846390-49846409 | None:intergenic | 30.0% |
| ! | CTTCTACATGTTTGAAATTG+TGG | - | chr7_3:49846778-49846797 | None:intergenic | 30.0% |
| !!! | TAGAAGCTTTTTTATGCCTA+TGG | + | chr7_3:49846792-49846811 | Msa1107720:intron | 30.0% |
| TATGCCTATGGAAACATATT+TGG | + | chr7_3:49846804-49846823 | Msa1107720:intron | 30.0% | |
| CGTATATATCATCATTGTAG+AGG | + | chr7_3:49846887-49846906 | Msa1107720:intron | 30.0% | |
| ! | TTTAACTTCTACAAATGAGG+AGG | - | chr7_3:49847039-49847058 | None:intergenic | 30.0% |
| GGTGTCAAGGTTTAAAAATA+AGG | + | chr7_3:49847095-49847114 | Msa1107720:intron | 30.0% | |
| AAGGAATCTATCTATTGTAG+TGG | + | chr7_3:49847114-49847133 | Msa1107720:intron | 30.0% | |
| ! | TAAGAGAGATTTTTGTGTTC+GGG | - | chr7_3:49847161-49847180 | None:intergenic | 30.0% |
| ! | CTAAGAGAGATTTTTGTGTT+CGG | - | chr7_3:49847162-49847181 | None:intergenic | 30.0% |
| ATAATTTCAGCAACACTGAT+TGG | + | chr7_3:49847448-49847467 | Msa1107720:intron | 30.0% | |
| ! | TAATTTCAGCAACACTGATT+GGG | + | chr7_3:49847449-49847468 | Msa1107720:intron | 30.0% |
| GAAATATGATGCGAGTAAAA+GGG | - | chr7_3:49847590-49847609 | None:intergenic | 30.0% | |
| AGAAATATGATGCGAGTAAA+AGG | - | chr7_3:49847591-49847610 | None:intergenic | 30.0% | |
| ! | ATCAATCTTTGCTGACATTT+TGG | - | chr7_3:49847648-49847667 | None:intergenic | 30.0% |
| AATTGTAAATATAGCCAGCA+CGG | - | chr7_3:49847852-49847871 | None:intergenic | 30.0% | |
| TCAAACCTCAGTATAATTGA+GGG | + | chr7_3:49847908-49847927 | Msa1107720:intron | 30.0% | |
| !!! | TAACGTTTTAAAAACTGAGC+CGG | - | chr7_3:49847991-49848010 | None:intergenic | 30.0% |
| !!! | TCAGTTTTTAAAACGTTAGG+TGG | + | chr7_3:49847993-49848012 | Msa1107720:intron | 30.0% |
| ! | GATTTTTATAAAAGGACCAG+AGG | - | chr7_3:49848496-49848515 | None:intergenic | 30.0% |
| AAAACAAATGATACACTCTC+TGG | - | chr7_3:49848755-49848774 | None:intergenic | 30.0% | |
| TAAGCCATCATTTATAACGT+TGG | - | chr7_3:49849009-49849028 | None:intergenic | 30.0% | |
| TATAAATGATGGCTTATTGC+AGG | + | chr7_3:49849013-49849032 | Msa1107720:intron | 30.0% | |
| ATTTCCTCATTAAGGCTATT+AGG | - | chr7_3:49849082-49849101 | None:intergenic | 30.0% | |
| ! | TAATAGCCTTAATGAGGAAA+TGG | + | chr7_3:49849081-49849100 | Msa1107720:CDS | 30.0% |
| ! | AATAGCCTTAATGAGGAAAT+GGG | + | chr7_3:49849082-49849101 | Msa1107720:CDS | 30.0% |
| ! | AACAACTCTTGATGATAACT+TGG | + | chr7_3:49849219-49849238 | Msa1107720:CDS | 30.0% |
| AAGCCTATCAAATACACATA+AGG | + | chr7_3:49849291-49849310 | Msa1107720:CDS | 30.0% | |
| !! | TCTTGGTTTGCGAAAAAATT+TGG | - | chr7_3:49849588-49849607 | None:intergenic | 30.0% |
| TTTGAAAATCACATTGAGCT+TGG | + | chr7_3:49849634-49849653 | Msa1107720:intron | 30.0% | |
| GCTTGGAAAATGAAAGAAAT+TGG | + | chr7_3:49849651-49849670 | Msa1107720:intron | 30.0% | |
| CTTATAAGATATCTTACTCC+CGG | - | chr7_3:49849692-49849711 | None:intergenic | 30.0% | |
| TGCAAGATATACTGTACAAT+GGG | + | chr7_3:49849799-49849818 | Msa1107720:CDS | 30.0% | |
| GTTCATGAAAATTGAAGAAG+TGG | + | chr7_3:49849937-49849956 | Msa1107720:CDS | 30.0% | |
| TTCATTTAGTCCTTACTAAG+TGG | + | chr7_3:49850116-49850135 | Msa1107720:intron | 30.0% | |
| !!! | TGCTACTTTTGATAAACTAC+AGG | - | chr7_3:49850183-49850202 | None:intergenic | 30.0% |
| ATATTGAGCAAAGTGATTGA+TGG | - | chr7_3:49850206-49850225 | None:intergenic | 30.0% | |
| CTTCTCAAAATGTCTATTGT+AGG | + | chr7_3:49850229-49850248 | Msa1107720:intron | 30.0% | |
| AGTAAATACTGTTGCTAGAT+TGG | + | chr7_3:49850505-49850524 | Msa1107720:CDS | 30.0% | |
| AATGTAGGAAGAACAATAAC+TGG | + | chr7_3:49850531-49850550 | Msa1107720:CDS | 30.0% | |
| ATGTAGGAAGAACAATAACT+GGG | + | chr7_3:49850532-49850551 | Msa1107720:CDS | 30.0% | |
| TCAAACAACTAACTTGATTC+TGG | - | chr7_3:49850575-49850594 | None:intergenic | 30.0% | |
| TTGTTTGATAGATTTGCCAA+AGG | + | chr7_3:49850587-49850606 | Msa1107720:three_prime_UTR | 30.0% | |
| ! | AAAGGCTATTAGGAGTTTTA+GGG | + | chr7_3:49850605-49850624 | Msa1107720:three_prime_UTR | 30.0% |
| ATAATATTCTGCATGAGACT+AGG | - | chr7_3:49850683-49850702 | None:intergenic | 30.0% | |
| TTGGAGAAACATAGCAAAAA+AGG | - | chr7_3:49850903-49850922 | None:intergenic | 30.0% | |
| !! | TTTTTGCTATGTTTCTCCAA+AGG | + | chr7_3:49850903-49850922 | Msa1107720:three_prime_UTR | 30.0% |
| !!! | CCAAAACACATTAGTTTTAC+AGG | - | chr7_3:49850977-49850996 | None:intergenic | 30.0% |
| ! | CCTGTAAAACTAATGTGTTT+TGG | + | chr7_3:49850974-49850993 | Msa1107720:intron | 30.0% |
| ! | TTGCTTCAACTTGTTTACTA+AGG | + | chr7_3:49851121-49851140 | Msa1107720:three_prime_UTR | 30.0% |
| TCAAAATCCAAATCTAGTGA+AGG | + | chr7_3:49851162-49851181 | Msa1107720:three_prime_UTR | 30.0% | |
| ! | ATTTTCTCCTTCACTAGATT+TGG | - | chr7_3:49851172-49851191 | None:intergenic | 30.0% |
| GAATCATTGCATGGAAACTT+TGG | + | chr7_3:49842254-49842273 | Msa1107720:intron | 35.0% | |
| TATTGGATTGATTGATGTGG+AGG | + | chr7_3:49842280-49842299 | Msa1107720:intron | 35.0% | |
| CTATTGGGTTCTTCATGTTT+AGG | + | chr7_3:49842480-49842499 | Msa1107720:intron | 35.0% | |
| !! | TTAGCACTGATGTCAAACAA+GGG | + | chr7_3:49842779-49842798 | Msa1107720:intron | 35.0% |
| !! | GAGGGAATTTTAATAGGACT+AGG | + | chr7_3:49843010-49843029 | Msa1107720:intron | 35.0% |
| CTTAATCCTTTAGGTACACA+GGG | - | chr7_3:49843300-49843319 | None:intergenic | 35.0% | |
| GTTATAGGGCTTAATCCTTT+AGG | - | chr7_3:49843309-49843328 | None:intergenic | 35.0% | |
| TGGATAGCATAAGAAGTTGT+TGG | - | chr7_3:49843333-49843352 | None:intergenic | 35.0% | |
| AGAACTTAACATGTAAGCAG+TGG | - | chr7_3:49843353-49843372 | None:intergenic | 35.0% | |
| ATCAGATTACACATGTTTGC+AGG | + | chr7_3:49843530-49843549 | Msa1107720:CDS | 35.0% | |
| AATTTCCCCATATAGGTCTT+GGG | - | chr7_3:49843697-49843716 | None:intergenic | 35.0% | |
| ! | CTTTTGCAATTTCCCCATAT+AGG | - | chr7_3:49843704-49843723 | None:intergenic | 35.0% |
| CTATATGGGGAAATTGCAAA+AGG | + | chr7_3:49843702-49843721 | Msa1107720:CDS | 35.0% | |
| !! | GGTGCAGTTATCAGTTTTAT+AGG | + | chr7_3:49843784-49843803 | Msa1107720:intron | 35.0% |
| GCTGATAGGTATGTTAACAT+AGG | + | chr7_3:49843958-49843977 | Msa1107720:intron | 35.0% | |
| ACAGTCTCTTGTGTAAAAAC+AGG | + | chr7_3:49844328-49844347 | Msa1107720:intron | 35.0% | |
| CAGTCTCTTGTGTAAAAACA+GGG | + | chr7_3:49844329-49844348 | Msa1107720:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr7_3:49844334-49844353 | Msa1107720:intron | 35.0% | |
| CACTGATGCATATCATATGT+CGG | + | chr7_3:49844550-49844569 | Msa1107720:intron | 35.0% | |
| ! | CATTGAGCAGTATTTCTGTA+TGG | + | chr7_3:49844602-49844621 | Msa1107720:intron | 35.0% |
| ! | AGCAGTATTTCTGTATGGAA+AGG | + | chr7_3:49844607-49844626 | Msa1107720:intron | 35.0% |
| TTCTGTATGGAAAGGACATT+AGG | + | chr7_3:49844615-49844634 | Msa1107720:intron | 35.0% | |
| AGAACATGCTCAACATTATC+AGG | - | chr7_3:49844846-49844865 | None:intergenic | 35.0% | |
| !! | AAATAATGGATACAGGCCAA+TGG | + | chr7_3:49844884-49844903 | Msa1107720:intron | 35.0% |
| GATTGAGCATATAACACCAA+AGG | - | chr7_3:49844997-49845016 | None:intergenic | 35.0% | |
| TTAAAGTAATGTTAGGGCAC+TGG | - | chr7_3:49845064-49845083 | None:intergenic | 35.0% | |
| GTGCCCTAACATTACTTTAA+TGG | + | chr7_3:49845064-49845083 | Msa1107720:intron | 35.0% | |
| GATGTAGTGATAGCAGATAA+TGG | + | chr7_3:49845152-49845171 | Msa1107720:CDS | 35.0% | |
| ATGTGGAACTGTTTATGACA+TGG | + | chr7_3:49845214-49845233 | Msa1107720:CDS | 35.0% | |
| TCATTTCAAAGTTCATGGGT+GGG | + | chr7_3:49845307-49845326 | Msa1107720:intron | 35.0% | |
| ATTCTGAGCATTCAACTAGT+GGG | - | chr7_3:49845377-49845396 | None:intergenic | 35.0% | |
| AATTCTGAGCATTCAACTAG+TGG | - | chr7_3:49845378-49845397 | None:intergenic | 35.0% | |
| !! | GAAGATAAAGGCATTTGACA+TGG | + | chr7_3:49845472-49845491 | Msa1107720:CDS | 35.0% |
| ACAATGAAGCTCACCTTTAT+AGG | - | chr7_3:49845548-49845567 | None:intergenic | 35.0% | |
| CAGGAGCTAATAATGTTAAC+AGG | + | chr7_3:49845594-49845613 | Msa1107720:intron | 35.0% | |
| CATAAAGTCATAGATGCAGA+TGG | - | chr7_3:49845671-49845690 | None:intergenic | 35.0% | |
| TGCATCTATGACTTTATGAC+TGG | + | chr7_3:49845673-49845692 | Msa1107720:CDS | 35.0% | |
| GAAACTAAATGCTTGCAATC+AGG | - | chr7_3:49845757-49845776 | None:intergenic | 35.0% | |
| ACATCCAATGGTTATTGTTC+TGG | + | chr7_3:49845883-49845902 | Msa1107720:intron | 35.0% | |
| CATCCAATGGTTATTGTTCT+GGG | + | chr7_3:49845884-49845903 | Msa1107720:intron | 35.0% | |
| AATGAAGGAAATGCATAGCA+AGG | - | chr7_3:49845938-49845957 | None:intergenic | 35.0% | |
| TGTTTCTCATCACAAATGTC+TGG | + | chr7_3:49846238-49846257 | Msa1107720:intron | 35.0% | |
| !! | GTTGATGGTTAAAAAAGCGA+AGG | - | chr7_3:49846300-49846319 | None:intergenic | 35.0% |
| !! | GTGATGGTTGTGTTTTTGTA+TGG | + | chr7_3:49846357-49846376 | Msa1107720:CDS | 35.0% |
| TCATCTATCATCTTGCAAAG+AGG | + | chr7_3:49846478-49846497 | Msa1107720:CDS | 35.0% | |
| ATGAGGATGTCTGTTCATTA+AGG | + | chr7_3:49846525-49846544 | Msa1107720:CDS | 35.0% | |
| TTAAGGAAAGAGAGACAAAG+CGG | + | chr7_3:49846542-49846561 | Msa1107720:CDS | 35.0% | |
| TATTTCAAGACTTCCCAGAT+GGG | + | chr7_3:49846622-49846641 | Msa1107720:CDS | 35.0% | |
| ! | TGTTTGAAATTGTGGGTAAG+AGG | - | chr7_3:49846770-49846789 | None:intergenic | 35.0% |
| CAAAATCCTAACACCATTTG+TGG | - | chr7_3:49847196-49847215 | None:intergenic | 35.0% | |
| !! | CACAAATGGTGTTAGGATTT+TGG | + | chr7_3:49847194-49847213 | Msa1107720:intron | 35.0% |
| ATGCAAGAAATATTAGAGGG+TGG | - | chr7_3:49847228-49847247 | None:intergenic | 35.0% | |
| !! | TTCTTGCATTGATGATGATC+AGG | + | chr7_3:49847239-49847258 | Msa1107720:intron | 35.0% |
| AGATGGTATTTGAACTTCTG+GGG | - | chr7_3:49847280-49847299 | None:intergenic | 35.0% | |
| CAGATGGTATTTGAACTTCT+GGG | - | chr7_3:49847281-49847300 | None:intergenic | 35.0% | |
| TCAGATGGTATTTGAACTTC+TGG | - | chr7_3:49847282-49847301 | None:intergenic | 35.0% | |
| ! | GATAAAGAAGCATGATCAGA+TGG | - | chr7_3:49847297-49847316 | None:intergenic | 35.0% |
| CTCTGTTTACACTGTTTGTA+TGG | + | chr7_3:49847485-49847504 | Msa1107720:CDS | 35.0% | |
| CTTAAACTCGAGGAAATCTT+TGG | - | chr7_3:49847558-49847577 | None:intergenic | 35.0% | |
| TTCCTCGAGTTTAAGTAAGT+TGG | + | chr7_3:49847563-49847582 | Msa1107720:intron | 35.0% | |
| ! | GACAAAAATGTTCTGGTTAG+AGG | + | chr7_3:49847699-49847718 | Msa1107720:intron | 35.0% |
| ATCAGTATCTGATTCAACCA+CGG | + | chr7_3:49847874-49847893 | Msa1107720:intron | 35.0% | |
| GTTTGACAATGATTAAACCG+TGG | - | chr7_3:49847894-49847913 | None:intergenic | 35.0% | |
| GTCAAACCTCAGTATAATTG+AGG | + | chr7_3:49847907-49847926 | Msa1107720:intron | 35.0% | |
| AAGATGTGGTTCAATTGGTT+TGG | - | chr7_3:49847936-49847955 | None:intergenic | 35.0% | |
| AAACCAATTGAACCACATCT+TGG | + | chr7_3:49847935-49847954 | Msa1107720:intron | 35.0% | |
| !!! | GGCTCAGTTTTTAAAACGTT+AGG | + | chr7_3:49847990-49848009 | Msa1107720:intron | 35.0% |
| !! | ATATTTACTTAGGGGTGTCT+GGG | + | chr7_3:49848262-49848281 | Msa1107720:intron | 35.0% |
| ! | GATTTGCTCATATTGGTCAA+TGG | - | chr7_3:49848459-49848478 | None:intergenic | 35.0% |
| TCAACATTTATTACTCCCTC+TGG | + | chr7_3:49848477-49848496 | Msa1107720:intron | 35.0% | |
| ! | AGGCATTTATTGAGTACTGT+GGG | + | chr7_3:49848645-49848664 | Msa1107720:intron | 35.0% |
| TGCTCCAACGTTATAAATGA+TGG | + | chr7_3:49849002-49849021 | Msa1107720:intron | 35.0% | |
| !!! | CATTATTTTTACTGACACGC+TGG | - | chr7_3:49849120-49849139 | None:intergenic | 35.0% |
| GTAAGGAAATACTGTAGTAG+TGG | - | chr7_3:49849530-49849549 | None:intergenic | 35.0% | |
| CGGGAGTAAGATATCTTATA+AGG | + | chr7_3:49849690-49849709 | Msa1107720:intron | 35.0% | |
| CAAGGAATTCATCAGTTAGA+AGG | + | chr7_3:49849771-49849790 | Msa1107720:CDS | 35.0% | |
| CTGCAAGATATACTGTACAA+TGG | + | chr7_3:49849798-49849817 | Msa1107720:CDS | 35.0% | |
| ! | TTCAATTTTCATGAACTGCG+AGG | - | chr7_3:49849933-49849952 | None:intergenic | 35.0% |
| CCAAATTGATTGCAAAAGGT+AGG | - | chr7_3:49850013-49850032 | None:intergenic | 35.0% | |
| ! | CCTACCTTTTGCAATCAATT+TGG | + | chr7_3:49850010-49850029 | Msa1107720:intron | 35.0% |
| ATCGACAGTTGAACTTTCTT+TGG | - | chr7_3:49850261-49850280 | None:intergenic | 35.0% | |
| AGAAAAAAGTTACGGAGAAG+AGG | + | chr7_3:49850418-49850437 | Msa1107720:CDS | 35.0% | |
| ! | TTGCTAGATTGGTTCAATGT+AGG | + | chr7_3:49850516-49850535 | Msa1107720:CDS | 35.0% |
| TGTAGGAAGAACAATAACTG+GGG | + | chr7_3:49850533-49850552 | Msa1107720:CDS | 35.0% | |
| TAGATTTGCCAAAGGCTATT+AGG | + | chr7_3:49850595-49850614 | Msa1107720:three_prime_UTR | 35.0% | |
| CTAAAACTCCTAATAGCCTT+TGG | - | chr7_3:49850606-49850625 | None:intergenic | 35.0% | |
| ! | CAAAGGCTATTAGGAGTTTT+AGG | + | chr7_3:49850604-49850623 | Msa1107720:three_prime_UTR | 35.0% |
| ! | TGAACGCATGTAACTACTTT+TGG | - | chr7_3:49850647-49850666 | None:intergenic | 35.0% |
| ACATCAAGGAGAAAAGTTGA+TGG | + | chr7_3:49850762-49850781 | Msa1107720:three_prime_UTR | 35.0% | |
| TGAGTCAAGAAGTCTAATCA+AGG | + | chr7_3:49850809-49850828 | Msa1107720:three_prime_UTR | 35.0% | |
| TTCTATATACCAGCTTCCTT+TGG | - | chr7_3:49850922-49850941 | None:intergenic | 35.0% | |
| ! | TGTGTTGCTGAATCATTGCA+TGG | + | chr7_3:49842245-49842264 | Msa1107720:intron | 40.0% |
| !! | GTTAGCACTGATGTCAAACA+AGG | + | chr7_3:49842778-49842797 | Msa1107720:intron | 40.0% |
| TTCGAAAAACACTGCAACTG+CGG | - | chr7_3:49842868-49842887 | None:intergenic | 40.0% | |
| TCACTAAAACATGCAACCCA+AGG | + | chr7_3:49842889-49842908 | Msa1107720:intron | 40.0% | |
| GCTTAATCCTTTAGGTACAC+AGG | - | chr7_3:49843301-49843320 | None:intergenic | 40.0% | |
| ! | TTTTGAGCGTGATGCAGTTA+AGG | + | chr7_3:49843401-49843420 | Msa1107720:CDS | 40.0% |
| AAGCGATCGAAATTCTTGAC+TGG | - | chr7_3:49843436-49843455 | None:intergenic | 40.0% | |
| AAGGTTTCCATTGCAATCAC+CGG | - | chr7_3:49843490-49843509 | None:intergenic | 40.0% | |
| CAATTTCCCCATATAGGTCT+TGG | - | chr7_3:49843698-49843717 | None:intergenic | 40.0% | |
| TATGGGGAAATTGCAAAAGG+CGG | + | chr7_3:49843705-49843724 | Msa1107720:CDS | 40.0% | |
| TCCATCTCTATGATGCTGAA+AGG | + | chr7_3:49843763-49843782 | Msa1107720:CDS | 40.0% | |
| ACCTTTCAGCATCATAGAGA+TGG | - | chr7_3:49843767-49843786 | None:intergenic | 40.0% | |
| TTCTTCATTATTGGCGCAAC+TGG | + | chr7_3:49844257-49844276 | Msa1107720:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr7_3:49844284-49844303 | Msa1107720:intron | 40.0% | |
| TTACACAAGAGACTGTTTCC+AGG | - | chr7_3:49844324-49844343 | None:intergenic | 40.0% | |
| TGCGTACAATACACAAATGG+TGG | + | chr7_3:49844358-49844377 | Msa1107720:intron | 40.0% | |
| GCGTACAATACACAAATGGT+GGG | + | chr7_3:49844359-49844378 | Msa1107720:intron | 40.0% | |
| TCGAATAAAAAAGGGCAACC+CGG | - | chr7_3:49844420-49844439 | None:intergenic | 40.0% | |
| GACAATAATGCAATGCCACT+TGG | + | chr7_3:49844452-49844471 | Msa1107720:intron | 40.0% | |
| TAAATAGCCAGTCAACCAAG+TGG | - | chr7_3:49844470-49844489 | None:intergenic | 40.0% | |
| ! | GGTTGACTGGCTATTTACTT+TGG | + | chr7_3:49844473-49844492 | Msa1107720:intron | 40.0% |
| ! | TGACTGGCTATTTACTTTGG+TGG | + | chr7_3:49844476-49844495 | Msa1107720:intron | 40.0% |
| GGCAAACGTTAATCAAGTGA+AGG | + | chr7_3:49844497-49844516 | Msa1107720:intron | 40.0% | |
| ! | TTTTGCTGCAACATCGTCAA+AGG | + | chr7_3:49845183-49845202 | Msa1107720:CDS | 40.0% |
| TTTGCTGCAACATCGTCAAA+GGG | + | chr7_3:49845184-49845203 | Msa1107720:CDS | 40.0% | |
| AACTGTTTATGACATGGCTG+TGG | + | chr7_3:49845220-49845239 | Msa1107720:CDS | 40.0% | |
| TGTGAGACTGTTGTTACAGT+TGG | + | chr7_3:49845251-49845270 | Msa1107720:CDS | 40.0% | |
| CTCATTTCAAAGTTCATGGG+TGG | + | chr7_3:49845306-49845325 | Msa1107720:intron | 40.0% | |
| !! | ACTTGGGAAGTATTCTACGA+CGG | - | chr7_3:49845338-49845357 | None:intergenic | 40.0% |
| TGACTTTATGACTGGAGAGA+TGG | + | chr7_3:49845681-49845700 | Msa1107720:CDS | 40.0% | |
| AACAATTTCAGCATGTCCTG+TGG | - | chr7_3:49845716-49845735 | None:intergenic | 40.0% | |
| GGACATGCTGAAATTGTTAC+TGG | + | chr7_3:49845718-49845737 | Msa1107720:CDS | 40.0% | |
| AGCAAGGACCACTTGAAAAA+GGG | - | chr7_3:49845922-49845941 | None:intergenic | 40.0% | |
| TAGCAAGGACCACTTGAAAA+AGG | - | chr7_3:49845923-49845942 | None:intergenic | 40.0% | |
| GATGATAGATGACTACAAGC+AGG | - | chr7_3:49846470-49846489 | None:intergenic | 40.0% | |
| GCATTGCAAGATCAATCATG+AGG | + | chr7_3:49846508-49846527 | Msa1107720:CDS | 40.0% | |
| TAAGGAAAGAGAGACAAAGC+GGG | + | chr7_3:49846543-49846562 | Msa1107720:CDS | 40.0% | |
| GTATTTCAAGACTTCCCAGA+TGG | + | chr7_3:49846621-49846640 | Msa1107720:CDS | 40.0% | |
| TGTTAGTGACACTTCATCAG+AGG | + | chr7_3:49846685-49846704 | Msa1107720:CDS | 40.0% | |
| !! | TCATCAGAGGTATCTGTACT+TGG | + | chr7_3:49846698-49846717 | Msa1107720:intron | 40.0% |
| GCTTAACCTAATGTCATCGA+GGG | - | chr7_3:49847007-49847026 | None:intergenic | 40.0% | |
| AGCTTAACCTAATGTCATCG+AGG | - | chr7_3:49847008-49847027 | None:intergenic | 40.0% | |
| !! | CTTCTAATGTAAGGGTGTCA+AGG | + | chr7_3:49847082-49847101 | Msa1107720:intron | 40.0% |
| ! | GAGATTTTTGTGTTCGGGAT+CGG | - | chr7_3:49847156-49847175 | None:intergenic | 40.0% |
| AACACCATTTGTGGTGATCA+TGG | - | chr7_3:49847187-49847206 | None:intergenic | 40.0% | |
| TGATCACCACAAATGGTGTT+AGG | + | chr7_3:49847187-49847206 | Msa1107720:intron | 40.0% | |
| TCAAGTACATTCTGCATCTC+GGG | - | chr7_3:49847525-49847544 | None:intergenic | 40.0% | |
| CTCAAGTACATTCTGCATCT+CGG | - | chr7_3:49847526-49847545 | None:intergenic | 40.0% | |
| TGCAGAATGTACTTGAGACA+AGG | + | chr7_3:49847529-49847548 | Msa1107720:CDS | 40.0% | |
| GTCCAACTTACTTAAACTCG+AGG | - | chr7_3:49847568-49847587 | None:intergenic | 40.0% | |
| TGGTTCCCTCAATTATACTG+AGG | - | chr7_3:49847916-49847935 | None:intergenic | 40.0% | |
| !! | CATATTTACTTAGGGGTGTC+TGG | + | chr7_3:49848261-49848280 | Msa1107720:intron | 40.0% |
| CTTGCACAAGTGTTTATGTC+TGG | + | chr7_3:49848387-49848406 | Msa1107720:intron | 40.0% | |
| TTGCTCATATTGGTCAATGG+CGG | - | chr7_3:49848456-49848475 | None:intergenic | 40.0% | |
| ! | GAGGCATTTATTGAGTACTG+TGG | + | chr7_3:49848644-49848663 | Msa1107720:intron | 40.0% |
| !! | ACTTAATACTTGGGTTGGCT+TGG | + | chr7_3:49848776-49848795 | Msa1107720:intron | 40.0% |
| ATTTGTATCAGCAGCAGCAT+TGG | - | chr7_3:49848943-49848962 | None:intergenic | 40.0% | |
| GCTTATTGCAGGACAAGATA+GGG | + | chr7_3:49849024-49849043 | Msa1107720:intron | 40.0% | |
| ATTAAGGCTATTAGGCTCAG+AGG | - | chr7_3:49849074-49849093 | None:intergenic | 40.0% | |
| ! | TGAGCCTAATAGCCTTAATG+AGG | + | chr7_3:49849075-49849094 | Msa1107720:CDS | 40.0% |
| CAACACCCATTTCCTCATTA+AGG | - | chr7_3:49849090-49849109 | None:intergenic | 40.0% | |
| !!! | TGAGGAAATGGGTGTTGTTT+TGG | + | chr7_3:49849093-49849112 | Msa1107720:CDS | 40.0% |
| CAGTCGCATTTAGAAGAATC+TGG | + | chr7_3:49849184-49849203 | Msa1107720:CDS | 40.0% | |
| ! | GGTATCTTTGAGCGACATTT+TGG | + | chr7_3:49849268-49849287 | Msa1107720:CDS | 40.0% |
| ATCTGTGCACATAATACGTC+AGG | - | chr7_3:49849746-49849765 | None:intergenic | 40.0% | |
| TGACGTATTATGTGCACAGA+TGG | + | chr7_3:49849745-49849764 | Msa1107720:intron | 40.0% | |
| ACTGTACAATGGGATTATGC+AGG | + | chr7_3:49849809-49849828 | Msa1107720:CDS | 40.0% | |
| CTGTACAATGGGATTATGCA+GGG | + | chr7_3:49849810-49849829 | Msa1107720:CDS | 40.0% | |
| TGTACAATGGGATTATGCAG+GGG | + | chr7_3:49849811-49849830 | Msa1107720:CDS | 40.0% | |
| AGTGGGAAATTCTTGTGAAC+AGG | + | chr7_3:49849955-49849974 | Msa1107720:CDS | 40.0% | |
| GATTGCAAAAGGTAGGACAT+AGG | - | chr7_3:49850006-49850025 | None:intergenic | 40.0% | |
| ATGGAAAGGACCACTTAGTA+AGG | - | chr7_3:49850129-49850148 | None:intergenic | 40.0% | |
| CAGTTGAACTTTCTTTGGCA+GGG | - | chr7_3:49850256-49850275 | None:intergenic | 40.0% | |
| ACAGTTGAACTTTCTTTGGC+AGG | - | chr7_3:49850257-49850276 | None:intergenic | 40.0% | |
| !! | CAAGAAAGCATTTGGTAGCT+TGG | + | chr7_3:49850355-49850374 | Msa1107720:CDS | 40.0% |
| AATAACTGGGGCAGTAGATT+AGG | + | chr7_3:49850545-49850564 | Msa1107720:CDS | 40.0% | |
| !!! | GGAGTTTTAGGGCAAAGTTT+AGG | + | chr7_3:49850616-49850635 | Msa1107720:three_prime_UTR | 40.0% |
| GTCTCTCACAGAAATCACTT+TGG | - | chr7_3:49850848-49850867 | None:intergenic | 40.0% | |
| TATGTTTCTCCAAAGGAAGC+TGG | + | chr7_3:49850910-49850929 | Msa1107720:three_prime_UTR | 40.0% | |
| TCGATACCTCGCAATAAGCT+GGG | - | chr7_3:49842709-49842728 | None:intergenic | 45.0% | |
| ATCGATACCTCGCAATAAGC+TGG | - | chr7_3:49842710-49842729 | None:intergenic | 45.0% | |
| TGTTACATTTGCGGCCATTG+TGG | - | chr7_3:49842915-49842934 | None:intergenic | 45.0% | |
| TGAGGCAGCTGTTACATTTG+CGG | - | chr7_3:49842924-49842943 | None:intergenic | 45.0% | |
| TCTATTGCTGCAGTAAGTGC+TGG | + | chr7_3:49843375-49843394 | Msa1107720:intron | 45.0% | |
| !! | TCGCTTGCTGTTAGTTCAGA+TGG | + | chr7_3:49843450-49843469 | Msa1107720:CDS | 45.0% |
| ATATAGGTCTTGGGTGGACA+AGG | - | chr7_3:49843688-49843707 | None:intergenic | 45.0% | |
| TTGTCCACCCAAGACCTATA+TGG | + | chr7_3:49843687-49843706 | Msa1107720:CDS | 45.0% | |
| TGTCCACCCAAGACCTATAT+GGG | + | chr7_3:49843688-49843707 | Msa1107720:CDS | 45.0% | |
| TTTGATCTTATCGGCAGCGT+TGG | + | chr7_3:49843868-49843887 | Msa1107720:CDS | 45.0% | |
| !! | TCCTCAGTTGTAGTGCTGAT+AGG | + | chr7_3:49843944-49843963 | Msa1107720:CDS | 45.0% |
| ACCTATCAGCACTACAACTG+AGG | - | chr7_3:49843948-49843967 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr7_3:49844290-49844309 | Msa1107720:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr7_3:49844291-49844310 | Msa1107720:intron | 45.0% | |
| GGCTGCGTACAATACACAAA+TGG | + | chr7_3:49844355-49844374 | Msa1107720:intron | 45.0% | |
| AACTTTCCCACCGCCTTTAA+GGG | - | chr7_3:49844687-49844706 | None:intergenic | 45.0% | |
| AAACTTTCCCACCGCCTTTA+AGG | - | chr7_3:49844688-49844707 | None:intergenic | 45.0% | |
| ! | TCACTACATCATGAAGCACC+AGG | - | chr7_3:49845142-49845161 | None:intergenic | 45.0% |
| GACTGTTGTTACAGTTGGAC+AGG | + | chr7_3:49845256-49845275 | Msa1107720:CDS | 45.0% | |
| AGGCATTTGACATGGCAACA+CGG | + | chr7_3:49845480-49845499 | Msa1107720:CDS | 45.0% | |
| TGGCAACACGGAGACTAATA+AGG | + | chr7_3:49845492-49845511 | Msa1107720:CDS | 45.0% | |
| GCACCCAGAACAATAACCAT+TGG | - | chr7_3:49845890-49845909 | None:intergenic | 45.0% | |
| ! | TATTGTTCTGGGTGCACCAA+CGG | + | chr7_3:49845895-49845914 | Msa1107720:intron | 45.0% |
| !! | CTAATGCGACTTGGTGTTTG+TGG | - | chr7_3:49846124-49846143 | None:intergenic | 45.0% |
| CACAAACACCAAGTCGCATT+AGG | + | chr7_3:49846122-49846141 | Msa1107720:intron | 45.0% | |
| TGTATTCAGGTGGATGGTGA+TGG | + | chr7_3:49846341-49846360 | Msa1107720:intron | 45.0% | |
| TCAGGGATTCTCAAAGGCAA+TGG | - | chr7_3:49846440-49846459 | None:intergenic | 45.0% | |
| GGTTGATCAGGGATTCTCAA+AGG | - | chr7_3:49846446-49846465 | None:intergenic | 45.0% | |
| ! | TACAAGCAGGAGGTTGATCA+GGG | - | chr7_3:49846457-49846476 | None:intergenic | 45.0% |
| GATAGATGACTACAAGCAGG+AGG | - | chr7_3:49846467-49846486 | None:intergenic | 45.0% | |
| AAAGAGAGACAAAGCGGGAA+TGG | + | chr7_3:49846548-49846567 | Msa1107720:CDS | 45.0% | |
| ! | ACTTTTGCTTGTGCCCATCT+GGG | - | chr7_3:49846638-49846657 | None:intergenic | 45.0% |
| !! | CGAGGGACTGGTTAATTAGA+AGG | - | chr7_3:49846990-49847009 | None:intergenic | 45.0% |
| AGCTCCATGATCACCACAAA+TGG | + | chr7_3:49847180-49847199 | Msa1107720:intron | 45.0% | |
| TGAGCACTCAATGCTCTTCA+AGG | + | chr7_3:49847328-49847347 | Msa1107720:CDS | 45.0% | |
| !! | GCTTACTTGAAAGTACCTCC+AGG | - | chr7_3:49847354-49847373 | None:intergenic | 45.0% |
| ! | ACACTGATTGGGACAACCAT+TGG | + | chr7_3:49847460-49847479 | Msa1107720:CDS | 45.0% |
| AAGTACATTCTGCATCTCGG+GGG | - | chr7_3:49847523-49847542 | None:intergenic | 45.0% | |
| CAAGTACATTCTGCATCTCG+GGG | - | chr7_3:49847524-49847543 | None:intergenic | 45.0% | |
| ! | GGTATTGCATGCAAAGTGTC+TGG | + | chr7_3:49847777-49847796 | Msa1107720:intron | 45.0% |
| ! | CGGTCAAACATGGTTCTACT+CGG | - | chr7_3:49847832-49847851 | None:intergenic | 45.0% |
| CCTCCAAGATGTGGTTCAAT+TGG | - | chr7_3:49847941-49847960 | None:intergenic | 45.0% | |
| CCAATTGAACCACATCTTGG+AGG | + | chr7_3:49847938-49847957 | Msa1107720:intron | 45.0% | |
| ATTGAACCACATCTTGGAGG+AGG | + | chr7_3:49847941-49847960 | Msa1107720:intron | 45.0% | |
| GAGTTCATGAGCATTAGCGT+AGG | - | chr7_3:49848087-49848106 | None:intergenic | 45.0% | |
| TGTCAATGAGAGGTTCGAGA+AGG | - | chr7_3:49848243-49848262 | None:intergenic | 45.0% | |
| ACACCTTGGCGTCAATGATT+TGG | + | chr7_3:49848706-49848725 | Msa1107720:intron | 45.0% | |
| AGACCAAATCATTGACGCCA+AGG | - | chr7_3:49848712-49848731 | None:intergenic | 45.0% | |
| GAATCAAACCTGAGACCTTG+AGG | - | chr7_3:49848835-49848854 | None:intergenic | 45.0% | |
| CTAAATTAGCCCACCCAGAT+TGG | - | chr7_3:49848867-49848886 | None:intergenic | 45.0% | |
| GGCTTATTGCAGGACAAGAT+AGG | + | chr7_3:49849023-49849042 | Msa1107720:intron | 45.0% | |
| TATTAGGCTCAGAGGAGATC+TGG | - | chr7_3:49849066-49849085 | None:intergenic | 45.0% | |
| !! | CGACTGCTCTGCTTTTCTAT+CGG | - | chr7_3:49849170-49849189 | None:intergenic | 45.0% |
| TTGGTATCCTGCTCAGTTTC+CGG | + | chr7_3:49849670-49849689 | Msa1107720:intron | 45.0% | |
| TATGTGCACAGATGGAGTCA+AGG | + | chr7_3:49849753-49849772 | Msa1107720:intron | 45.0% | |
| AGTCCTGTCAGAAATATGCC+TGG | + | chr7_3:49849854-49849873 | Msa1107720:CDS | 45.0% | |
| ! | CTACCAGGCATATTTCTGAC+AGG | - | chr7_3:49849860-49849879 | None:intergenic | 45.0% |
| GAAATATGCCTGGTAGCAAG+AGG | + | chr7_3:49849864-49849883 | Msa1107720:CDS | 45.0% | |
| ATCAGTTGCAGCTTCTTCCT+TGG | - | chr7_3:49849891-49849910 | None:intergenic | 45.0% | |
| AAGTTCAACTGTCGATCAGC+TGG | + | chr7_3:49850265-49850284 | Msa1107720:CDS | 45.0% | |
| AGTTCAACTGTCGATCAGCT+GGG | + | chr7_3:49850266-49850285 | Msa1107720:CDS | 45.0% | |
| CTAGACCGAGATCAAAAGGA+AGG | + | chr7_3:49850290-49850309 | Msa1107720:CDS | 45.0% | |
| TGCTTTCTTGCATGCAGCTA+TGG | - | chr7_3:49850345-49850364 | None:intergenic | 45.0% | |
| !! | GCTGCATGCAAGAAAGCATT+TGG | + | chr7_3:49850347-49850366 | Msa1107720:CDS | 45.0% |
| ! | GGAGAAGAGGTTTCAAGTGA+TGG | + | chr7_3:49850431-49850450 | Msa1107720:CDS | 45.0% |
| TAGAAGCTGCGAAGAAGACT+CGG | + | chr7_3:49850869-49850888 | Msa1107720:three_prime_UTR | 45.0% | |
| !! | AAATAAAAAAAAAAATAACA+AGG | - | chr7_3:49851227-49851246 | None:intergenic | 5.0% |
| CGATACCTCGCAATAAGCTG+GGG | - | chr7_3:49842708-49842727 | None:intergenic | 50.0% | |
| GCAAATGTAACAGCTGCCTC+AGG | + | chr7_3:49842923-49842942 | Msa1107720:intron | 50.0% | |
| ACGAAACCTGTTGTAGCCTG+AGG | - | chr7_3:49842942-49842961 | None:intergenic | 50.0% | |
| GTTCTGCCCTGTGTACCTAA+AGG | + | chr7_3:49843291-49843310 | Msa1107720:intron | 50.0% | |
| !! | GATGGAAAGCATCTTGCTGC+CGG | + | chr7_3:49843468-49843487 | Msa1107720:CDS | 50.0% |
| AGCGCCCTGAAACAATATGC+AGG | - | chr7_3:49843634-49843653 | None:intergenic | 50.0% | |
| GTCCACCCAAGACCTATATG+GGG | + | chr7_3:49843689-49843708 | Msa1107720:CDS | 50.0% | |
| TTCCCCATATAGGTCTTGGG+TGG | - | chr7_3:49843694-49843713 | None:intergenic | 50.0% | |
| ! | GCGGTTACTTTCTTGCCTCA+GGG | + | chr7_3:49843724-49843743 | Msa1107720:CDS | 50.0% |
| ! | CGGTTACTTTCTTGCCTCAG+GGG | + | chr7_3:49843725-49843744 | Msa1107720:CDS | 50.0% |
| ! | GGTTACTTTCTTGCCTCAGG+GGG | + | chr7_3:49843726-49843745 | Msa1107720:CDS | 50.0% |
| !! | CGGCAGCGTTGGTAATCATT+CGG | + | chr7_3:49843879-49843898 | Msa1107720:CDS | 50.0% |
| ! | TGCAATGCCACTTGGTTGAC+TGG | + | chr7_3:49844460-49844479 | Msa1107720:intron | 50.0% |
| CGTCAAAGGGCTTCACAATG+TGG | + | chr7_3:49845197-49845216 | Msa1107720:CDS | 50.0% | |
| GGATCCTAGCTGCACATATG+TGG | + | chr7_3:49845624-49845643 | Msa1107720:CDS | 50.0% | |
| CAGACCACATATGTGCAGCT+AGG | - | chr7_3:49845631-49845650 | None:intergenic | 50.0% | |
| CCACTTGAAAAAGGGTCCGT+TGG | - | chr7_3:49845914-49845933 | None:intergenic | 50.0% | |
| !!! | CCAACGGACCCTTTTTCAAG+TGG | + | chr7_3:49845911-49845930 | Msa1107720:intron | 50.0% |
| ! | CTACAAGCAGGAGGTTGATC+AGG | - | chr7_3:49846458-49846477 | None:intergenic | 50.0% |
| ! | CACTTTTGCTTGTGCCCATC+TGG | - | chr7_3:49846639-49846658 | None:intergenic | 50.0% |
| TGGGCACAAGCAAAAGTGAC+TGG | + | chr7_3:49846641-49846660 | Msa1107720:CDS | 50.0% | |
| CTGGCTGCAATAATGTCTGC+AGG | + | chr7_3:49846660-49846679 | Msa1107720:CDS | 50.0% | |
| ACCAGTCCCTCGATGACATT+AGG | + | chr7_3:49846998-49847017 | Msa1107720:intron | 50.0% | |
| ACCTAATGTCATCGAGGGAC+TGG | - | chr7_3:49847002-49847021 | None:intergenic | 50.0% | |
| CATTGAGTGCTCACAGTCTC+TGG | - | chr7_3:49847321-49847340 | None:intergenic | 50.0% | |
| ACTCAATGCTCTTCAAGGCC+TGG | + | chr7_3:49847333-49847352 | Msa1107720:CDS | 50.0% | |
| ! | CAGTGTAAACAGAGCGCCAA+TGG | - | chr7_3:49847479-49847498 | None:intergenic | 50.0% |
| AGAACCATGTTTGACCGTGC+TGG | + | chr7_3:49847835-49847854 | Msa1107720:intron | 50.0% | |
| ATAGCCAGCACGGTCAAACA+TGG | - | chr7_3:49847842-49847861 | None:intergenic | 50.0% | |
| ACTACACCTCCTCCAAGATG+TGG | - | chr7_3:49847950-49847969 | None:intergenic | 50.0% | |
| CAATGAGAGGTTCGAGAAGG+AGG | - | chr7_3:49848240-49848259 | None:intergenic | 50.0% | |
| !! | TTGGGTTGGCTTGGTGATGT+TGG | + | chr7_3:49848785-49848804 | Msa1107720:intron | 50.0% |
| !! | TTGGCTTGGTGATGTTGGCT+TGG | + | chr7_3:49848790-49848809 | Msa1107720:intron | 50.0% |
| !! | TGGCTTGGTGATGTTGGCTT+GGG | + | chr7_3:49848791-49848810 | Msa1107720:intron | 50.0% |
| ! | TTGAGGAGGAGCACAATCCA+AGG | - | chr7_3:49848818-49848837 | None:intergenic | 50.0% |
| TTGGATTGTGCTCCTCCTCA+AGG | + | chr7_3:49848817-49848836 | Msa1107720:intron | 50.0% | |
| TCAAACCTGAGACCTTGAGG+AGG | - | chr7_3:49848832-49848851 | None:intergenic | 50.0% | |
| ATTCTCCCCGATGCCAATCT+GGG | + | chr7_3:49848851-49848870 | Msa1107720:intron | 50.0% | |
| ! | AGCAGCAGCATTGGACATTG+TGG | - | chr7_3:49848934-49848953 | None:intergenic | 50.0% |
| TGGTATCCTGCTCAGTTTCC+GGG | + | chr7_3:49849671-49849690 | Msa1107720:intron | 50.0% | |
| AACTGCGAGGATCTGCTTTC+TGG | - | chr7_3:49849920-49849939 | None:intergenic | 50.0% | |
| GTTCAACTGTCGATCAGCTG+GGG | + | chr7_3:49850267-49850286 | Msa1107720:CDS | 50.0% | |
| GACCGAGATCAAAAGGAAGG+TGG | + | chr7_3:49850293-49850312 | Msa1107720:CDS | 50.0% | |
| ! | GGCCACCTTCCTTTTGATCT+CGG | - | chr7_3:49850298-49850317 | None:intergenic | 50.0% |
| AAAAGGAAGGTGGCCGTGAA+GGG | + | chr7_3:49850303-49850322 | Msa1107720:CDS | 50.0% | |
| CTTGCAGTTCACTCCCTTCA+CGG | - | chr7_3:49850319-49850338 | None:intergenic | 50.0% | |
| TGTAGCCCCAGCTTATTGCG+AGG | + | chr7_3:49842700-49842719 | Msa1107720:intron | 55.0% | |
| CATGCAACCCAAGGCCACAA+TGG | + | chr7_3:49842898-49842917 | Msa1107720:intron | 55.0% | |
| TTTGCGGCCATTGTGGCCTT+GGG | - | chr7_3:49842908-49842927 | None:intergenic | 55.0% | |
| ATTTGCGGCCATTGTGGCCT+TGG | - | chr7_3:49842909-49842928 | None:intergenic | 55.0% | |
| CTTGCTGCCGGTGATTGCAA+TGG | + | chr7_3:49843480-49843499 | Msa1107720:CDS | 55.0% | |
| ! | GGCGGTTACTTTCTTGCCTC+AGG | + | chr7_3:49843723-49843742 | Msa1107720:CDS | 55.0% |
| ACTTTCTTGCCTCAGGGGGA+CGG | + | chr7_3:49843730-49843749 | Msa1107720:CDS | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr7_3:49844303-49844322 | Msa1107720:intron | 55.0% | |
| GACCCCTTACCTTGCGTATG+CGG | + | chr7_3:49844381-49844400 | Msa1107720:intron | 55.0% | |
| ACCCCTTACCTTGCGTATGC+GGG | + | chr7_3:49844382-49844401 | Msa1107720:intron | 55.0% | |
| TCCCGCATACGCAAGGTAAG+GGG | - | chr7_3:49844386-49844405 | None:intergenic | 55.0% | |
| CTCCCGCATACGCAAGGTAA+GGG | - | chr7_3:49844387-49844406 | None:intergenic | 55.0% | |
| ATGCGGGAGCTTCAGTGTAC+CGG | + | chr7_3:49844398-49844417 | Msa1107720:intron | 55.0% | |
| ! | TTTCCCACCGCCTTTAAGGG+TGG | - | chr7_3:49844684-49844703 | None:intergenic | 55.0% |
| GACTGGAGAGATGGTTGCCA+AGG | + | chr7_3:49845690-49845709 | Msa1107720:CDS | 55.0% | |
| TTCAGCATGTCCTGTGGCCT+TGG | - | chr7_3:49845710-49845729 | None:intergenic | 55.0% | |
| CAATGCTCTTCAAGGCCTGG+AGG | + | chr7_3:49847336-49847355 | Msa1107720:CDS | 55.0% | |
| !! | GTGATGTTGGCTTGGGACCT+TGG | + | chr7_3:49848798-49848817 | Msa1107720:intron | 55.0% |
| GATTCTCCCCGATGCCAATC+TGG | + | chr7_3:49848850-49848869 | Msa1107720:intron | 55.0% | |
| TAGCCCACCCAGATTGGCAT+CGG | - | chr7_3:49848861-49848880 | None:intergenic | 55.0% | |
| CTGCGCTGTGAAGAAGAGAG+TGG | + | chr7_3:49849247-49849266 | Msa1107720:CDS | 55.0% | |
| CTTACTCCCGGAAACTGAGC+AGG | - | chr7_3:49849680-49849699 | None:intergenic | 55.0% | |
| TCCTTGGACCTCTTGCTACC+AGG | - | chr7_3:49849875-49849894 | None:intergenic | 55.0% | |
| GGGGCTAGACCGAGATCAAA+AGG | + | chr7_3:49850286-49850305 | Msa1107720:CDS | 55.0% | |
| CAAAAGGAAGGTGGCCGTGA+AGG | + | chr7_3:49850302-49850321 | Msa1107720:CDS | 55.0% | |
| GTGACTTCCCTTGTGCCCGT+AGG | + | chr7_3:49842833-49842852 | Msa1107720:intron | 60.0% | |
| CAGCTGCCTCAGGCTACAAC+AGG | + | chr7_3:49842933-49842952 | Msa1107720:intron | 60.0% | |
| CTTTCTTGCCTCAGGGGGAC+GGG | + | chr7_3:49843731-49843750 | Msa1107720:CDS | 60.0% | |
| CATACAATCCCGTCCCCCTG+AGG | - | chr7_3:49843742-49843761 | None:intergenic | 60.0% | |
| GCTCCCGCATACGCAAGGTA+AGG | - | chr7_3:49844388-49844407 | None:intergenic | 60.0% | |
| CTGAAGCTCCCGCATACGCA+AGG | - | chr7_3:49844393-49844412 | None:intergenic | 60.0% | |
| TGCGGGAGCTTCAGTGTACC+GGG | + | chr7_3:49844399-49844418 | Msa1107720:intron | 60.0% | |
| AGCAGCCCCACCACCCTTAA+AGG | + | chr7_3:49844671-49844690 | Msa1107720:intron | 60.0% | |
| AGCCCCACCACCCTTAAAGG+CGG | + | chr7_3:49844674-49844693 | Msa1107720:intron | 60.0% | |
| ! | CACCGCCTTTAAGGGTGGTG+GGG | - | chr7_3:49844679-49844698 | None:intergenic | 60.0% |
| ! | CCACCGCCTTTAAGGGTGGT+GGG | - | chr7_3:49844680-49844699 | None:intergenic | 60.0% |
| CCACCACCCTTAAAGGCGGT+GGG | + | chr7_3:49844678-49844697 | Msa1107720:intron | 60.0% | |
| GAGATGGTTGCCAAGGCCAC+AGG | + | chr7_3:49845697-49845716 | Msa1107720:CDS | 60.0% | |
| GTGCTCCTCCTCAAGGTCTC+AGG | + | chr7_3:49848824-49848843 | Msa1107720:intron | 60.0% | |
| TCCCCGATGCCAATCTGGGT+GGG | + | chr7_3:49848855-49848874 | Msa1107720:intron | 60.0% | |
| AGCCCACCCAGATTGGCATC+GGG | - | chr7_3:49848860-49848879 | None:intergenic | 60.0% | |
| GCCTGGTAGCAAGAGGTCCA+AGG | + | chr7_3:49849871-49849890 | Msa1107720:CDS | 60.0% | |
| ! | CGAAGCGCCTACGGGCACAA+GGG | - | chr7_3:49842843-49842862 | None:intergenic | 65.0% |
| ! | ACTGCGGTGCGAAGCGCCTA+CGG | - | chr7_3:49842852-49842871 | None:intergenic | 65.0% |
| CCCACCACCCTTAAAGGCGG+TGG | + | chr7_3:49844677-49844696 | Msa1107720:intron | 65.0% | |
| ! | CCCACCGCCTTTAAGGGTGG+TGG | - | chr7_3:49844681-49844700 | None:intergenic | 65.0% |
| CTCCCCGATGCCAATCTGGG+TGG | + | chr7_3:49848854-49848873 | Msa1107720:intron | 65.0% | |
| GCCCACCCAGATTGGCATCG+GGG | - | chr7_3:49848859-49848878 | None:intergenic | 65.0% | |
| ! | GCGAAGCGCCTACGGGCACA+AGG | - | chr7_3:49842844-49842863 | None:intergenic | 70.0% |
| ! | CTGCGGTGCGAAGCGCCTAC+GGG | - | chr7_3:49842851-49842870 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 49842159 | 49851257 | 49842159 | ID=Msa1107720;Name=Msa1107720 |
| chr7_3 | mRNA | 49842159 | 49851257 | 49842159 | ID=Msa1107720-mRNA-1;Parent=Msa1107720;Name=Msa1107720-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0.85|0.8|1|0.78|0.66|15|555|736 |
| chr7_3 | exon | 49842159 | 49842177 | 49842159 | ID=Msa1107720-mRNA-1:exon:10128;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49843388 | 49843551 | 49843388 | ID=Msa1107720-mRNA-1:exon:10129;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49843648 | 49843784 | 49843648 | ID=Msa1107720-mRNA-1:exon:10130;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49843864 | 49843965 | 49843864 | ID=Msa1107720-mRNA-1:exon:10131;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49845136 | 49845277 | 49845136 | ID=Msa1107720-mRNA-1:exon:10132;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49845467 | 49845553 | 49845467 | ID=Msa1107720-mRNA-1:exon:10133;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49845616 | 49845777 | 49845616 | ID=Msa1107720-mRNA-1:exon:10134;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49846350 | 49846587 | 49846350 | ID=Msa1107720-mRNA-1:exon:10135;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49846600 | 49846706 | 49846600 | ID=Msa1107720-mRNA-1:exon:10136;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49847261 | 49847367 | 49847261 | ID=Msa1107720-mRNA-1:exon:10137;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49847458 | 49847576 | 49847458 | ID=Msa1107720-mRNA-1:exon:10138;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49849035 | 49849312 | 49849035 | ID=Msa1107720-mRNA-1:exon:10139;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49849764 | 49849976 | 49849764 | ID=Msa1107720-mRNA-1:exon:10140;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49850251 | 49850958 | 49850251 | ID=Msa1107720-mRNA-1:exon:10141;Parent=Msa1107720-mRNA-1 |
| chr7_3 | exon | 49851075 | 49851257 | 49851075 | ID=Msa1107720-mRNA-1:exon:10142;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49842159 | 49842177 | 49842159 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49843388 | 49843551 | 49843388 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49843648 | 49843784 | 49843648 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49843864 | 49843965 | 49843864 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49845136 | 49845277 | 49845136 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49845467 | 49845553 | 49845467 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49845616 | 49845777 | 49845616 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49846350 | 49846587 | 49846350 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49846600 | 49846706 | 49846600 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49847261 | 49847367 | 49847261 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49847458 | 49847576 | 49847458 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49849035 | 49849312 | 49849035 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49849764 | 49849976 | 49849764 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | CDS | 49850251 | 49850586 | 49850251 | ID=Msa1107720-mRNA-1:cds;Parent=Msa1107720-mRNA-1 |
| chr7_3 | three_prime_UTR | 49850587 | 49850958 | 49850587 | ID=Msa1107720-mRNA-1:three_prime_utr;Parent=Msa1107720-mRNA-1 |
| chr7_3 | three_prime_UTR | 49851075 | 49851257 | 49851075 | ID=Msa1107720-mRNA-1:three_prime_utr;Parent=Msa1107720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
