Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109600 | XP_013454685.1 | 86.006 | 636 | 46 | 5 | 62 | 670 | 1 | 620 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109600 | A0A072UH09 | 86.006 | 636 | 46 | 5 | 62 | 670 | 1 | 620 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0375310 | Msa1109600 | 0.805152 | 1.532633e-49 | -8.615850e-47 |
| Msa0421500 | Msa1109600 | 0.806212 | 9.178959e-50 | -8.615850e-47 |
| Msa0530820 | Msa1109600 | 0.877635 | 5.366484e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109600 | MtrunA17_Chr4g0003771 | 86.006 | 636 | 46 | 5 | 62 | 670 | 1 | 620 | 0.0 | 1028 |
| Msa1109600 | MtrunA17_Chr4g0067821 | 25.349 | 501 | 316 | 13 | 71 | 551 | 10 | 472 | 1.99e-32 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109600 | AT5G11240.1 | 29.745 | 353 | 222 | 5 | 71 | 407 | 9 | 351 | 3.39e-37 | 147 |
| Msa1109600 | AT1G15420.1 | 37.374 | 198 | 82 | 9 | 437 | 606 | 35 | 218 | 1.74e-20 | 92.4 |
| Msa1109600 | AT1G15420.2 | 35.135 | 185 | 92 | 6 | 437 | 607 | 35 | 205 | 8.91e-19 | 86.3 |
Find 159 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTAAATATTAGTGATTT+AGG | 0.140856 | 7_3:+53263264 | Msa1109600:CDS |
| ATCCAGCTCTGTGTCATTCT+TGG | 0.154928 | 7_3:-53264612 | None:intergenic |
| TCCCCAATTGTTTGCTCATT+TGG | 0.165741 | 7_3:-53264551 | None:intergenic |
| TCATTCTAGGGGTGCAATTT+TGG | 0.170768 | 7_3:+53265640 | Msa1109600:intron |
| TTAGTATATCTGACCTTTCT+TGG | 0.181897 | 7_3:-53263349 | None:intergenic |
| TGCTAATAGCTGGGACTTAA+TGG | 0.195948 | 7_3:-53266666 | None:intergenic |
| CACAACTGACAAGGTGGATT+TGG | 0.246483 | 7_3:+53263923 | Msa1109600:CDS |
| AAAGTAAACATCTTCAAGTT+TGG | 0.292180 | 7_3:+53262887 | Msa1109600:CDS |
| TCTTAAATATTAGTGATTTA+GGG | 0.295585 | 7_3:+53263265 | Msa1109600:CDS |
| ATGCAGTTTCACTGGGAAAA+AGG | 0.301729 | 7_3:+53261216 | Msa1109600:CDS |
| ATGGAATTTGGATGCAATAA+AGG | 0.313012 | 7_3:-53263172 | None:intergenic |
| CCTTCACAGTTTACACCTTC+AGG | 0.318794 | 7_3:+53259002 | Msa1109600:CDS |
| ATGACACTTACCATATCATT+AGG | 0.325045 | 7_3:-53262729 | None:intergenic |
| GTCTCAGCAGTTACGTCTTC+AGG | 0.326049 | 7_3:+53263018 | Msa1109600:CDS |
| GACCGGACAGGGAGTGGCGG+CGG | 0.329841 | 7_3:-53258960 | None:intergenic |
| ACTGACTAATCTCAATTTAC+TGG | 0.335974 | 7_3:+53264577 | Msa1109600:CDS |
| AACTTGCTCTTTGTCACTCT+TGG | 0.336193 | 7_3:-53264645 | None:intergenic |
| TCCGTGTCCACATAGATAAT+TGG | 0.336735 | 7_3:-53266470 | None:intergenic |
| TGGAGGTGTGACTTAAGTTT+AGG | 0.341028 | 7_3:+53262907 | Msa1109600:CDS |
| CTCAAAACTGTGATGCTTTG+TGG | 0.343002 | 7_3:-53266780 | None:intergenic |
| CTTACGGCTTTCACACCTAA+TGG | 0.350828 | 7_3:+53260420 | Msa1109600:CDS |
| GATGGTGAAGGGTAAGTTAA+AGG | 0.352630 | 7_3:+53260389 | Msa1109600:CDS |
| GATCCAAATGAGCAAACAAT+TGG | 0.355713 | 7_3:+53264548 | Msa1109600:CDS |
| TCAGTTGTGGTTGGAAGATC+AGG | 0.364295 | 7_3:-53263909 | None:intergenic |
| TATGAGTTTAATTCTGAAAC+AGG | 0.368224 | 7_3:+53262475 | Msa1109600:CDS |
| GGACAGCTTCTTTGTGTTGT+TGG | 0.373076 | 7_3:+53262436 | Msa1109600:CDS |
| AGATGACCGCACCCTTCTTC+TGG | 0.376441 | 7_3:+53264727 | Msa1109600:CDS |
| CGAGTTATAAGTTGGGAAAC+TGG | 0.378633 | 7_3:+53262687 | Msa1109600:CDS |
| TGTTATCAATTGCTAATAGC+TGG | 0.379550 | 7_3:-53266676 | None:intergenic |
| CTTTGTGTTGTTGGACATGA+TGG | 0.379769 | 7_3:+53262445 | Msa1109600:CDS |
| CCTACTAGTCATCCGATTCC+CGG | 0.395768 | 7_3:+53261560 | Msa1109600:CDS |
| ACCCTTGAGGCATGCTCCAT+TGG | 0.397420 | 7_3:+53262954 | Msa1109600:CDS |
| TCTGAAGTGCCCTAATGATA+TGG | 0.401133 | 7_3:+53262719 | Msa1109600:CDS |
| GTGTGTGCGGCGGACCGGAC+AGG | 0.406435 | 7_3:-53258972 | None:intergenic |
| TGTATTGCATGCAGTTTCAC+TGG | 0.415055 | 7_3:+53261208 | Msa1109600:CDS |
| GCAGCTATTCTGTCTGCAAA+TGG | 0.415659 | 7_3:+53260450 | Msa1109600:CDS |
| GCTATCTTTGTCAGTGTCCA+TGG | 0.417175 | 7_3:-53266519 | None:intergenic |
| ATCCAAATGAGCAAACAATT+GGG | 0.422843 | 7_3:+53264549 | Msa1109600:CDS |
| ACAACTGACAAGGTGGATTT+GGG | 0.423409 | 7_3:+53263924 | Msa1109600:CDS |
| TGTGGACAAGCAAATGTATA+TGG | 0.428052 | 7_3:-53266762 | None:intergenic |
| TGCATCCAAATTCCATTCCA+TGG | 0.428872 | 7_3:+53263179 | Msa1109600:CDS |
| GTCAGTGTCCATGGCATCCT+CGG | 0.432229 | 7_3:-53266510 | None:intergenic |
| TTGGAAGACAGATTTAAAAG+TGG | 0.432645 | 7_3:-53266293 | None:intergenic |
| CGGATGTGTGTGCGGCGGAC+CGG | 0.433814 | 7_3:-53258977 | None:intergenic |
| GCGGCGGACCGGACAGGGAG+TGG | 0.436768 | 7_3:-53258966 | None:intergenic |
| CTCGCTGTTGATGTTTCCAC+TGG | 0.439393 | 7_3:+53261524 | Msa1109600:CDS |
| ATGCAAGCTGTGTTGACTTA+TGG | 0.439684 | 7_3:+53263216 | Msa1109600:CDS |
| TTAGCTCTCGGAACGGAAGA+TGG | 0.440496 | 7_3:+53261494 | Msa1109600:CDS |
| TCCCGCCGCCACTCCCTGTC+CGG | 0.447636 | 7_3:+53258958 | Msa1109600:CDS |
| CTAGACTACGAGTTATAAGT+TGG | 0.457270 | 7_3:+53262679 | Msa1109600:CDS |
| TCTTCACTGGCTTTCTCACA+TGG | 0.458648 | 7_3:+53262538 | Msa1109600:CDS |
| GGAGAATGTGGTATTAAATG+TGG | 0.458764 | 7_3:+53263287 | Msa1109600:CDS |
| ATAGCTGCATAGTCACCATT+AGG | 0.460078 | 7_3:-53260435 | None:intergenic |
| TTTCCACTGGTGAGAGGAAG+TGG | 0.461504 | 7_3:+53261537 | Msa1109600:CDS |
| GGTGTGAAAGCCGTAAGAAC+AGG | 0.461677 | 7_3:-53260414 | None:intergenic |
| ACCGGACAGGGAGTGGCGGC+GGG | 0.461894 | 7_3:-53258959 | None:intergenic |
| GTTAAAGGAACCTGTTCTTA+CGG | 0.464735 | 7_3:+53260404 | Msa1109600:CDS |
| ATTGAATGAAAACGTTATCA+TGG | 0.468450 | 7_3:+53266866 | Msa1109600:three_prime_UTR |
| CGGTCCGCCGCACACACATC+CGG | 0.476701 | 7_3:+53258978 | Msa1109600:CDS |
| TGACAGAAATACCCGGGAAT+CGG | 0.480215 | 7_3:-53261572 | None:intergenic |
| TGTCTAAGAAACTTGAGAGT+TGG | 0.481539 | 7_3:-53266312 | None:intergenic |
| CTTCAGGTGGAACTTACATA+TGG | 0.486164 | 7_3:+53263034 | Msa1109600:CDS |
| TGACACTTACCATATCATTA+GGG | 0.487717 | 7_3:-53262728 | None:intergenic |
| TTGGTTCTTGATTGCCACTC+CGG | 0.488851 | 7_3:+53262973 | Msa1109600:CDS |
| GCTCATTTGGATCATCATCA+AGG | 0.491997 | 7_3:-53264538 | None:intergenic |
| GATAATCTTAGTGACGTTGA+AGG | 0.493113 | 7_3:+53266572 | Msa1109600:CDS |
| ACTGAAAGCAGCAGTAGAAA+AGG | 0.494658 | 7_3:+53263848 | Msa1109600:intron |
| GTAAACATCTTCAAGTTTGG+AGG | 0.497984 | 7_3:+53262890 | Msa1109600:CDS |
| GCATCCAAATTCCATTCCAT+GGG | 0.503938 | 7_3:+53263180 | Msa1109600:CDS |
| CATGACAGCCTTTCCAAGAA+AGG | 0.505596 | 7_3:+53263336 | Msa1109600:CDS |
| ATAGCGAAAGTTCAAAGAAA+AGG | 0.506147 | 7_3:+53263142 | Msa1109600:CDS |
| AGACAAAGTCGAAAGTGATA+AGG | 0.506707 | 7_3:+53263116 | Msa1109600:CDS |
| CAGCTATTCTGTCTGCAAAT+GGG | 0.511683 | 7_3:+53260451 | Msa1109600:CDS |
| AGAAGCTTACCCCGGTGTAA+AGG | 0.512950 | 7_3:-53266336 | None:intergenic |
| TGAGAAAGCCAGTGAAGAGA+TGG | 0.517464 | 7_3:-53262533 | None:intergenic |
| TGTACAAGCAATCCAGAAGA+AGG | 0.518949 | 7_3:-53264739 | None:intergenic |
| AAGGCTGTCATGCTTCTGAA+TGG | 0.520204 | 7_3:-53263325 | None:intergenic |
| TGAAGGTAGTGATGGTATGA+TGG | 0.520944 | 7_3:+53266589 | Msa1109600:CDS |
| GTTCCGAGAGCTAATAAGTA+AGG | 0.523266 | 7_3:-53261485 | None:intergenic |
| CAAATCCACCTTGTCAGTTG+TGG | 0.523283 | 7_3:-53263922 | None:intergenic |
| ACTGACAAAGATAGCAAAGA+AGG | 0.524530 | 7_3:+53266527 | Msa1109600:CDS |
| TCCACCTTGTCAGTTGTGGT+TGG | 0.526474 | 7_3:-53263918 | None:intergenic |
| CCGGGAATCGGATGACTAGT+AGG | 0.527690 | 7_3:-53261560 | None:intergenic |
| AAGTTGGGAAACTGGTAAAG+AGG | 0.528152 | 7_3:+53262695 | Msa1109600:CDS |
| TCATCATACAGTGGGATTTG+CGG | 0.532835 | 7_3:+53262394 | Msa1109600:intron |
| GGACCTTACTTATTAGCTCT+CGG | 0.532898 | 7_3:+53261482 | Msa1109600:CDS |
| TTCAAGTGAGTTCTGCATGA+TGG | 0.534487 | 7_3:+53265756 | Msa1109600:CDS |
| CTTAAATATTAGTGATTTAG+GGG | 0.534808 | 7_3:+53263266 | Msa1109600:CDS |
| ATATCTGACCTTTCTTGGAA+AGG | 0.536348 | 7_3:-53263344 | None:intergenic |
| CTACTAGTCATCCGATTCCC+GGG | 0.537747 | 7_3:+53261561 | Msa1109600:CDS |
| GTTATCAATTGCTAATAGCT+GGG | 0.540175 | 7_3:-53266675 | None:intergenic |
| GCATGCCTCAAGGGTAGTGT+TGG | 0.546380 | 7_3:-53262946 | None:intergenic |
| TGTGTGCGGCGGACCGGACA+GGG | 0.550097 | 7_3:-53258971 | None:intergenic |
| AATTTGAATGCCTCTTCTGA+AGG | 0.551388 | 7_3:+53263060 | Msa1109600:CDS |
| GCAGAGTGGAAGCCATCAGA+TGG | 0.554222 | 7_3:+53261163 | Msa1109600:CDS |
| TAGTGATTTAGGGGAGAATG+TGG | 0.555475 | 7_3:+53263275 | Msa1109600:CDS |
| GAGAATGTGGTATTAAATGT+GGG | 0.555720 | 7_3:+53263288 | Msa1109600:CDS |
| AAGGTTAACTGAGATGGTGA+AGG | 0.556011 | 7_3:+53260377 | Msa1109600:intron |
| ATCCAAGAATGACACAGAGC+TGG | 0.556575 | 7_3:+53264610 | Msa1109600:CDS |
| GTATTGCATGCAGTTTCACT+GGG | 0.556977 | 7_3:+53261209 | Msa1109600:CDS |
| GCGGACCGGACAGGGAGTGG+CGG | 0.558656 | 7_3:-53258963 | None:intergenic |
| TTCTTAGACATCCTTTACAC+CGG | 0.558696 | 7_3:+53266325 | Msa1109600:CDS |
| CTTGTACACGCAAGATGAGA+AGG | 0.561271 | 7_3:+53264754 | Msa1109600:CDS |
| ACCAATGGAGCATGCCTCAA+GGG | 0.561747 | 7_3:-53262955 | None:intergenic |
| TAGACTACGAGTTATAAGTT+GGG | 0.563426 | 7_3:+53262680 | Msa1109600:CDS |
| GAGTGGCAATCAAGAACCAA+TGG | 0.567220 | 7_3:-53262970 | None:intergenic |
| TGAAACAGGAGAGCTTCTAA+AGG | 0.570461 | 7_3:+53262489 | Msa1109600:CDS |
| TCTACACTATCTGCACTTGG+AGG | 0.572947 | 7_3:-53264677 | None:intergenic |
| TGTTTGAAGGTTAACTGAGA+TGG | 0.574502 | 7_3:+53260371 | Msa1109600:intron |
| GTTCTTGATTGCCACTCCGG+TGG | 0.575186 | 7_3:+53262976 | Msa1109600:CDS |
| AAGAGAATCCGAGGATGCCA+TGG | 0.575249 | 7_3:+53266502 | Msa1109600:CDS |
| TTTGTGTTGTTGGACATGAT+GGG | 0.577817 | 7_3:+53262446 | Msa1109600:CDS |
| TGCAAGTGGAATAATGTCCC+AGG | 0.578119 | 7_3:+53265703 | Msa1109600:CDS |
| TAAATCATCTTCATTGCCAC+CGG | 0.579220 | 7_3:-53262992 | None:intergenic |
| AAGAAAGAAAACAAACTCGA+AGG | 0.580778 | 7_3:-53258898 | None:intergenic |
| AACCAATGGAGCATGCCTCA+AGG | 0.585971 | 7_3:-53262956 | None:intergenic |
| AACAGTGCCAATTATCTATG+TGG | 0.590133 | 7_3:+53266463 | Msa1109600:CDS |
| CTGAAGGTGTAAACTGTGAA+GGG | 0.591140 | 7_3:-53259001 | None:intergenic |
| CTGACAAAGATAGCAAAGAA+GGG | 0.592191 | 7_3:+53266528 | Msa1109600:CDS |
| AGAAGTAGACATTTCAGCCA+TGG | 0.592596 | 7_3:-53265674 | None:intergenic |
| ACATCTACACTATCTGCACT+TGG | 0.592728 | 7_3:-53264680 | None:intergenic |
| CTACTTCTACAGCATGCAAG+TGG | 0.594965 | 7_3:+53265689 | Msa1109600:CDS |
| ATATCATGAACTCCATCTGA+TGG | 0.595193 | 7_3:-53261175 | None:intergenic |
| CCTGAAGGTGTAAACTGTGA+AGG | 0.598160 | 7_3:-53259002 | None:intergenic |
| GCCAATTATCTATGTGGACA+CGG | 0.599140 | 7_3:+53266469 | Msa1109600:CDS |
| TCTTAGACATCCTTTACACC+GGG | 0.601967 | 7_3:+53266326 | Msa1109600:CDS |
| CAGATTTGGAATACAAACAG+TGG | 0.605146 | 7_3:+53261130 | Msa1109600:intron |
| TGTTGTTGGACATGATGGGA+AGG | 0.606171 | 7_3:+53262450 | Msa1109600:CDS |
| TCTTCCAACCACAACTGACA+AGG | 0.614649 | 7_3:+53263914 | Msa1109600:CDS |
| AGGTGTAAACTGTGAAGGGC+CGG | 0.616120 | 7_3:-53258997 | None:intergenic |
| AGGTTAACTGAGATGGTGAA+GGG | 0.617825 | 7_3:+53260378 | Msa1109600:intron |
| TCCAAATGAGCAAACAATTG+GGG | 0.618540 | 7_3:+53264550 | Msa1109600:CDS |
| GATCAATGTGAGGTTGTTGA+CGG | 0.620406 | 7_3:+53264512 | Msa1109600:intron |
| AGTGACGTTGAAGGTAGTGA+TGG | 0.620717 | 7_3:+53266581 | Msa1109600:CDS |
| TGAATAGGTGCTTGACGAGG+AGG | 0.621235 | 7_3:+53266427 | Msa1109600:intron |
| TTACTTATTAGCTCTCGGAA+CGG | 0.621773 | 7_3:+53261487 | Msa1109600:CDS |
| GTGTACTTGACCTTCAGAAG+AGG | 0.628171 | 7_3:-53263070 | None:intergenic |
| AGTTTAGGAACTGTGAGTGG+TGG | 0.629851 | 7_3:+53262922 | Msa1109600:CDS |
| TATTCTGTCTGCAAATGGGA+CGG | 0.630145 | 7_3:+53260455 | Msa1109600:CDS |
| TTGATGTTTCCACTGGTGAG+AGG | 0.633142 | 7_3:+53261531 | Msa1109600:CDS |
| TGAAGGGCCGGATGTGTGTG+CGG | 0.642149 | 7_3:-53258985 | None:intergenic |
| TGATAGTGAAAGAGAATCCG+AGG | 0.642868 | 7_3:+53266493 | Msa1109600:CDS |
| GTGGAGATTTGTTAGCAGAG+TGG | 0.645375 | 7_3:+53261149 | Msa1109600:CDS |
| TGACAAAGATAGCAAAGAAG+GGG | 0.645803 | 7_3:+53266529 | Msa1109600:CDS |
| AGGCCACTTCCTCTCACCAG+TGG | 0.645921 | 7_3:-53261540 | None:intergenic |
| TCCAACCACAACTGACAAGG+TGG | 0.646455 | 7_3:+53263917 | Msa1109600:CDS |
| AGCAATCCAGAAGAAGGGTG+CGG | 0.646504 | 7_3:-53264733 | None:intergenic |
| GTACAAGCAATCCAGAAGAA+GGG | 0.650839 | 7_3:-53264738 | None:intergenic |
| CATCTTCATTGCCACCGGAG+TGG | 0.651757 | 7_3:-53262987 | None:intergenic |
| TCAGCAGTTACGTCTTCAGG+TGG | 0.656715 | 7_3:+53263021 | Msa1109600:CDS |
| TGTTGAATAGGTGCTTGACG+AGG | 0.666788 | 7_3:+53266424 | Msa1109600:intron |
| CATCCAAATTCCATTCCATG+GGG | 0.678818 | 7_3:+53263181 | Msa1109600:CDS |
| ATATTTAAGACTGTAAACTG+TGG | 0.690852 | 7_3:-53263252 | None:intergenic |
| TTAAGTTTAGGAACTGTGAG+TGG | 0.702462 | 7_3:+53262919 | Msa1109600:CDS |
| AGGGCCGGATGTGTGTGCGG+CGG | 0.702907 | 7_3:-53258982 | None:intergenic |
| ATTTAATGTAGATCAATGTG+AGG | 0.722303 | 7_3:+53264502 | Msa1109600:intron |
| ATCCAAATTCCATTCCATGG+GGG | 0.733289 | 7_3:+53263182 | Msa1109600:CDS |
| GTGGTCCAACACTACCCTTG+AGG | 0.738669 | 7_3:+53262941 | Msa1109600:CDS |
| CTTAGACATCCTTTACACCG+GGG | 0.742537 | 7_3:+53266327 | Msa1109600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACATTCAAAAAATAAAT+TGG | - | chr7_3:53264445-53264464 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAATGTTAATTAT+TGG | + | chr7_3:53264449-53264468 | Msa1109600:intron | 10.0% |
| !! | AAATTTGATTATTTCAATTG+AGG | - | chr7_3:53259135-53259154 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTTTTTATATGA+TGG | + | chr7_3:53260114-53260133 | Msa1109600:intron | 15.0% |
| !!! | TGTTTTTTTAATGCTTTAAA+AGG | + | chr7_3:53261392-53261411 | Msa1109600:intron | 15.0% |
| !!! | AATTTTTGTATACTTCATAT+TGG | + | chr7_3:53262181-53262200 | Msa1109600:intron | 15.0% |
| !!! | ATCGATACATTTTTAAATAT+GGG | - | chr7_3:53262254-53262273 | None:intergenic | 15.0% |
| !!! | AATCGATACATTTTTAAATA+TGG | - | chr7_3:53262255-53262274 | None:intergenic | 15.0% |
| !! | AAGAACAACAAATTATATAA+CGG | - | chr7_3:53262361-53262380 | None:intergenic | 15.0% |
| !! | TCTTAAATATTAGTGATTTA+GGG | + | chr7_3:53263265-53263284 | Msa1109600:CDS | 15.0% |
| !! | ATGTATAAATAAGAGAAATA+AGG | + | chr7_3:53263541-53263560 | Msa1109600:intron | 15.0% |
| !! | TGTATAAATAAGAGAAATAA+GGG | + | chr7_3:53263542-53263561 | Msa1109600:intron | 15.0% |
| !! | ATAAAACATGAAATTCTATT+TGG | + | chr7_3:53263720-53263739 | Msa1109600:intron | 15.0% |
| !!! | TAATATTTTAAATTGTTTGC+TGG | + | chr7_3:53263956-53263975 | Msa1109600:intron | 15.0% |
| !! | CTATTAAGAATAAAAGAAAA+AGG | + | chr7_3:53264195-53264214 | Msa1109600:intron | 15.0% |
| !! | TGAAATTAAAAATCTAGAAA+TGG | - | chr7_3:53265259-53265278 | None:intergenic | 15.0% |
| !!! | TAATTATGATACTTGTTAAA+GGG | - | chr7_3:53265535-53265554 | None:intergenic | 15.0% |
| !!! | ATAATTATGATACTTGTTAA+AGG | - | chr7_3:53265536-53265555 | None:intergenic | 15.0% |
| !!! | TGTTATAAATCTACAATTTT+TGG | + | chr7_3:53265975-53265994 | Msa1109600:intron | 15.0% |
| !!! | GTTATAAATCTACAATTTTT+GGG | + | chr7_3:53265976-53265995 | Msa1109600:intron | 15.0% |
| !! | AATAAGTTGTTTATCCAAAT+AGG | + | chr7_3:53259477-53259496 | Msa1109600:intron | 20.0% |
| !! | ATAAGTTGTTTATCCAAATA+GGG | + | chr7_3:53259478-53259497 | Msa1109600:intron | 20.0% |
| !!! | TTAATGTGGAAAATTTTGAA+TGG | + | chr7_3:53259557-53259576 | Msa1109600:intron | 20.0% |
| !! | TTTGATATACAATACAACAA+GGG | - | chr7_3:53259777-53259796 | None:intergenic | 20.0% |
| !!! | TTTTGATATACAATACAACA+AGG | - | chr7_3:53259778-53259797 | None:intergenic | 20.0% |
| !!! | TCCTTTTTTCGTATATTTTA+AGG | + | chr7_3:53259898-53259917 | Msa1109600:intron | 20.0% |
| !!! | CCTTTTTTCGTATATTTTAA+GGG | + | chr7_3:53259899-53259918 | Msa1109600:intron | 20.0% |
| !! | AAAATAAAGAGTAAAGCTTA+TGG | - | chr7_3:53260085-53260104 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTTATATGATGGT+TGG | + | chr7_3:53260118-53260137 | Msa1109600:intron | 20.0% |
| !! | ATAATTGTTAACTCTTACTT+TGG | + | chr7_3:53260594-53260613 | Msa1109600:intron | 20.0% |
| !!! | TTTTCGTTAAAAGACAAAAT+TGG | - | chr7_3:53260763-53260782 | None:intergenic | 20.0% |
| !!! | AATAAGATTTTGTTGGATAT+TGG | + | chr7_3:53261042-53261061 | Msa1109600:intron | 20.0% |
| !!! | AATAGTTTTACTTTGTTCAA+TGG | - | chr7_3:53261668-53261687 | None:intergenic | 20.0% |
| !! | ATTAAATATACAACAATGCA+TGG | - | chr7_3:53261726-53261745 | None:intergenic | 20.0% |
| !! | GCAAATATTAAATTTGTCAT+TGG | + | chr7_3:53261830-53261849 | Msa1109600:intron | 20.0% |
| !!! | ATTGGTTCACATTTTATATT+TGG | - | chr7_3:53261901-53261920 | None:intergenic | 20.0% |
| !!! | TACATTTTTAAATATGGGAT+GGG | - | chr7_3:53262249-53262268 | None:intergenic | 20.0% |
| !!! | ATACATTTTTAAATATGGGA+TGG | - | chr7_3:53262250-53262269 | None:intergenic | 20.0% |
| !! | TGAAACTGGTAATAATATTA+AGG | - | chr7_3:53262279-53262298 | None:intergenic | 20.0% |
| !! | ATGTAACAAGATTAATTGTT+AGG | - | chr7_3:53262597-53262616 | None:intergenic | 20.0% |
| !! | TAACAATTAATCTTGTTACA+TGG | + | chr7_3:53262596-53262615 | Msa1109600:intron | 20.0% |
| !!! | ATAGCTAAATATTTTTCATC+TGG | - | chr7_3:53262651-53262670 | None:intergenic | 20.0% |
| !!! | AATTAAATATTTTGCATCAC+TGG | - | chr7_3:53262854-53262873 | None:intergenic | 20.0% |
| !!! | TTTTCAAGGTTATTTTAGTT+CGG | - | chr7_3:53263095-53263114 | None:intergenic | 20.0% |
| !! | GTCTTAAATATTAGTGATTT+AGG | + | chr7_3:53263264-53263283 | Msa1109600:CDS | 20.0% |
| !! | CTTAAATATTAGTGATTTAG+GGG | + | chr7_3:53263266-53263285 | Msa1109600:CDS | 20.0% |
| !!! | TTGTTGATATGTTCATTTTT+AGG | + | chr7_3:53263504-53263523 | Msa1109600:intron | 20.0% |
| !! | AAAAGAAAAATTCATTGTGA+AGG | + | chr7_3:53263603-53263622 | Msa1109600:intron | 20.0% |
| !! | AAAGAAAAATTCATTGTGAA+GGG | + | chr7_3:53263604-53263623 | Msa1109600:intron | 20.0% |
| !!! | AATGTCACAATTTTTTTAGT+TGG | + | chr7_3:53263748-53263767 | Msa1109600:intron | 20.0% |
| !!! | ATGTCACAATTTTTTTAGTT+GGG | + | chr7_3:53263749-53263768 | Msa1109600:intron | 20.0% |
| !!! | ATATGTTCTTTTCAAAATTC+AGG | - | chr7_3:53264102-53264121 | None:intergenic | 20.0% |
| !!! | TTAGCTTTAATAAGACAATT+TGG | + | chr7_3:53264289-53264308 | Msa1109600:intron | 20.0% |
| !!! | TGCACTATTATTTTTTTGAA+TGG | + | chr7_3:53264389-53264408 | Msa1109600:intron | 20.0% |
| !! | ATTCAAAAAATAAATTGGAG+TGG | - | chr7_3:53264440-53264459 | None:intergenic | 20.0% |
| !! | TTATATCCATTATTGAATCT+AGG | + | chr7_3:53264934-53264953 | Msa1109600:intron | 20.0% |
| !! | GCATACTAAACATATAAAAA+GGG | - | chr7_3:53265180-53265199 | None:intergenic | 20.0% |
| !!! | TTTTCTGTTAATAATCCTAA+AGG | - | chr7_3:53265437-53265456 | None:intergenic | 20.0% |
| !! | AGGATTATTAACAGAAAAAA+TGG | + | chr7_3:53265439-53265458 | Msa1109600:intron | 20.0% |
| !! | GTTAATTATAACCATTTGTT+TGG | - | chr7_3:53265512-53265531 | None:intergenic | 20.0% |
| !!! | AATTATGATACTTGTTAAAG+GGG | - | chr7_3:53265534-53265553 | None:intergenic | 20.0% |
| !! | AAAAGAAAGAGAAAATAACT+TGG | - | chr7_3:53265563-53265582 | None:intergenic | 20.0% |
| !!! | TTATTTTCTCTTTCTTTTAC+AGG | + | chr7_3:53265565-53265584 | Msa1109600:intron | 20.0% |
| !!! | ATTGGTAATTTAAAAGACAT+GGG | - | chr7_3:53265819-53265838 | None:intergenic | 20.0% |
| !!! | AATTGGTAATTTAAAAGACA+TGG | - | chr7_3:53265820-53265839 | None:intergenic | 20.0% |
| !! | AGATATGAAATGCATATAAT+TGG | - | chr7_3:53265837-53265856 | None:intergenic | 20.0% |
| !! | GCACAATAAATAGATAAAAA+AGG | - | chr7_3:53266252-53266271 | None:intergenic | 20.0% |
| ! | TTAGGGTTTATGTGTTAATT+AGG | + | chr7_3:53259102-53259121 | Msa1109600:intron | 25.0% |
| !!! | GTTGTTTTCATTAACTATCT+CGG | - | chr7_3:53259364-53259383 | None:intergenic | 25.0% |
| !! | AATGTGGGTTTTTATTAATG+TGG | + | chr7_3:53259543-53259562 | Msa1109600:intron | 25.0% |
| ! | TAGTTCAATGACTTAAAAAC+CGG | - | chr7_3:53259682-53259701 | None:intergenic | 25.0% |
| ! | CCCTTAAAATATACGAAAAA+AGG | - | chr7_3:53259902-53259921 | None:intergenic | 25.0% |
| !!! | TTTGAACTTTTATAGTTCTG+TGG | + | chr7_3:53260163-53260182 | Msa1109600:intron | 25.0% |
| ! | CAAAGTCTAATATCTGATTT+AGG | + | chr7_3:53260328-53260347 | Msa1109600:intron | 25.0% |
| !! | ATATCTGATTTAGGTGATTT+TGG | + | chr7_3:53260337-53260356 | Msa1109600:intron | 25.0% |
| !! | ATAAGTGTCTTGTCTAATTT+TGG | + | chr7_3:53260555-53260574 | Msa1109600:intron | 25.0% |
| !!! | TGACATCATTTTAGTTGAAT+AGG | - | chr7_3:53260944-53260963 | None:intergenic | 25.0% |
| !! | TGTTGCAAATAAGATTTTGT+TGG | + | chr7_3:53261035-53261054 | Msa1109600:intron | 25.0% |
| !!! | CATCTTCTATTTTTCAGATT+TGG | + | chr7_3:53261116-53261135 | Msa1109600:intron | 25.0% |
| ! | TGATATGATGAATATACCTT+GGG | - | chr7_3:53261307-53261326 | None:intergenic | 25.0% |
| ! | ATGATATGATGAATATACCT+TGG | - | chr7_3:53261308-53261327 | None:intergenic | 25.0% |
| ! | TATATATTTACCTCTTCAGA+AGG | + | chr7_3:53261361-53261380 | Msa1109600:intron | 25.0% |
| ! | ATATATTTACCTCTTCAGAA+GGG | + | chr7_3:53261362-53261381 | Msa1109600:intron | 25.0% |
| ! | TGTTGTAATTAGCGTAAAAA+AGG | + | chr7_3:53261455-53261474 | Msa1109600:intron | 25.0% |
| ! | TAATTAGCGTAAAAAAGGTA+AGG | + | chr7_3:53261460-53261479 | Msa1109600:intron | 25.0% |
| ! | AATTAGCGTAAAAAAGGTAA+GGG | + | chr7_3:53261461-53261480 | Msa1109600:intron | 25.0% |
| ! | AAACATTGCTTCATTTCATA+GGG | - | chr7_3:53261975-53261994 | None:intergenic | 25.0% |
| ! | TAAACATTGCTTCATTTCAT+AGG | - | chr7_3:53261976-53261995 | None:intergenic | 25.0% |
| ! | CAATGTTTAATAAAATGCAC+TGG | + | chr7_3:53261987-53262006 | Msa1109600:intron | 25.0% |
| !!! | TATGAGTTTAATTCTGAAAC+AGG | + | chr7_3:53262475-53262494 | Msa1109600:CDS | 25.0% |
| !!! | ACTAAATTACTTTTGGATCT+TGG | + | chr7_3:53262566-53262585 | Msa1109600:intron | 25.0% |
| ! | AACAAGATTAATTGTTAGGA+TGG | - | chr7_3:53262593-53262612 | None:intergenic | 25.0% |
| !!! | TTTTACTTTTATGCCTTAAC+AGG | + | chr7_3:53262804-53262823 | Msa1109600:intron | 25.0% |
| !!! | TTTACTTTTATGCCTTAACA+GGG | + | chr7_3:53262805-53262824 | Msa1109600:intron | 25.0% |
| !! | AAAGTAAACATCTTCAAGTT+TGG | + | chr7_3:53262887-53262906 | Msa1109600:CDS | 25.0% |
| !! | ATATTTAAGACTGTAAACTG+TGG | - | chr7_3:53263255-53263274 | None:intergenic | 25.0% |
| ! | GTTCCATTTAGGTAATTATT+AGG | + | chr7_3:53263407-53263426 | Msa1109600:intron | 25.0% |
| ! | TCACCTAATAATTACCTAAA+TGG | - | chr7_3:53263413-53263432 | None:intergenic | 25.0% |
| !!! | ATGTTCATTTTTAGGATAGA+CGG | + | chr7_3:53263512-53263531 | Msa1109600:intron | 25.0% |
| ! | AGAAATAAGGGTAGAAAAAT+GGG | + | chr7_3:53263554-53263573 | Msa1109600:intron | 25.0% |
| ! | AAGAAAAATTCATTGTGAAG+GGG | + | chr7_3:53263605-53263624 | Msa1109600:intron | 25.0% |
| ! | ACAGTAATCTCAATTTCAAT+GGG | - | chr7_3:53264057-53264076 | None:intergenic | 25.0% |
| ! | AACAGTAATCTCAATTTCAA+TGG | - | chr7_3:53264058-53264077 | None:intergenic | 25.0% |
| ! | GCAAAGCATAAATACATTAA+TGG | - | chr7_3:53264126-53264145 | None:intergenic | 25.0% |
| !! | TTTCCATATAGTTTTTGCTA+AGG | + | chr7_3:53264234-53264253 | Msa1109600:intron | 25.0% |
| ! | CAAAAAAATAATAGTGCAGA+TGG | - | chr7_3:53264387-53264406 | None:intergenic | 25.0% |
| !!! | AATTATTGGTGAAGTATTGA+TGG | + | chr7_3:53264463-53264482 | Msa1109600:intron | 25.0% |
| !!! | TGAAGTATTGATGGTATTTT+TGG | + | chr7_3:53264472-53264491 | Msa1109600:intron | 25.0% |
| ! | ATTTAATGTAGATCAATGTG+AGG | + | chr7_3:53264502-53264521 | Msa1109600:intron | 25.0% |
| ! | TAAGAGAATTAAGTAGTTTG+AGG | - | chr7_3:53264917-53264936 | None:intergenic | 25.0% |
| ! | GTATTACCTAGATTCAATAA+TGG | - | chr7_3:53264943-53264962 | None:intergenic | 25.0% |
| ! | GGCATACTAAACATATAAAA+AGG | - | chr7_3:53265181-53265200 | None:intergenic | 25.0% |
| !!! | GAATTTGTTGGTCAAAATTT+TGG | + | chr7_3:53265410-53265429 | Msa1109600:intron | 25.0% |
| !! | TTTTCTTTCTTTCTCATTCT+AGG | + | chr7_3:53265627-53265646 | Msa1109600:intron | 25.0% |
| ! | TTTCTTTCTTTCTCATTCTA+GGG | + | chr7_3:53265628-53265647 | Msa1109600:intron | 25.0% |
| !!! | AACTTTTAAAGAAGATTCCT+GGG | - | chr7_3:53265723-53265742 | None:intergenic | 25.0% |
| !!! | AAACTTTTAAAGAAGATTCC+TGG | - | chr7_3:53265724-53265743 | None:intergenic | 25.0% |
| !!! | ATCTACAATTTTTGGGTAAT+TGG | + | chr7_3:53265983-53266002 | Msa1109600:intron | 25.0% |
| ! | GATTCAATTGTTCAACAAAT+TGG | + | chr7_3:53266128-53266147 | Msa1109600:intron | 25.0% |
| ! | ATTGAATGAAAACGTTATCA+TGG | + | chr7_3:53266866-53266885 | Msa1109600:three_prime_UTR | 25.0% |
| AAGAAAGAAAACAAACTCGA+AGG | - | chr7_3:53258901-53258920 | None:intergenic | 30.0% | |
| CTTATCATTGTGTTATAAGC+TGG | + | chr7_3:53259453-53259472 | Msa1109600:intron | 30.0% | |
| ! | CATTTATTTCTTATTCGCGT+TGG | + | chr7_3:53259611-53259630 | Msa1109600:intron | 30.0% |
| !!! | TGCTCAGTTTTGTTGTTTTA+GGG | - | chr7_3:53259728-53259747 | None:intergenic | 30.0% |
| ! | AAGGCAGTAGAAATTTTCAA+TGG | - | chr7_3:53259822-53259841 | None:intergenic | 30.0% |
| TATACGAAAAAAGGAAAACC+TGG | - | chr7_3:53259893-53259912 | None:intergenic | 30.0% | |
| AATGCTTTGTCTATTTGACA+CGG | - | chr7_3:53260020-53260039 | None:intergenic | 30.0% | |
| ! | TTTTTATATGATGGTTGGCA+AGG | + | chr7_3:53260123-53260142 | Msa1109600:intron | 30.0% |
| AGTTCTGTGGTCTATTATAT+TGG | + | chr7_3:53260176-53260195 | Msa1109600:intron | 30.0% | |
| TTAACCTTCAAACAACAAAG+AGG | - | chr7_3:53260365-53260384 | None:intergenic | 30.0% | |
| TTTCATGAGCCATTTATGTT+AGG | + | chr7_3:53260532-53260551 | Msa1109600:intron | 30.0% | |
| GACACTTATCCTAACATAAA+TGG | - | chr7_3:53260544-53260563 | None:intergenic | 30.0% | |
| GTTGCTTAACAAATATTGCA+AGG | + | chr7_3:53260785-53260804 | Msa1109600:intron | 30.0% | |
| AAACTGCTTCCTTGAATTTA+CGG | + | chr7_3:53260854-53260873 | Msa1109600:intron | 30.0% | |
| ATTTCAGAACCGTAAATTCA+AGG | - | chr7_3:53260866-53260885 | None:intergenic | 30.0% | |
| AAAAAGATTTGTAGAGTGAC+GGG | - | chr7_3:53260906-53260925 | None:intergenic | 30.0% | |
| GAAAAAGATTTGTAGAGTGA+CGG | - | chr7_3:53260907-53260926 | None:intergenic | 30.0% | |
| ATATGATGAATATACCTTGG+GGG | - | chr7_3:53261305-53261324 | None:intergenic | 30.0% | |
| GATATGATGAATATACCTTG+GGG | - | chr7_3:53261306-53261325 | None:intergenic | 30.0% | |
| ATTCAAATGACAGAAATACC+CGG | - | chr7_3:53261582-53261601 | None:intergenic | 30.0% | |
| ! | TCATTCAAATGAGTGCTTTT+TGG | + | chr7_3:53261687-53261706 | Msa1109600:intron | 30.0% |
| AACAATGCATGGAGATTAAA+GGG | - | chr7_3:53261715-53261734 | None:intergenic | 30.0% | |
| !! | GTAAAAGTGTTAATTGACCT+TGG | + | chr7_3:53261769-53261788 | Msa1109600:intron | 30.0% |
| TTAATTGACCTTGGTTATCT+TGG | + | chr7_3:53261778-53261797 | Msa1109600:intron | 30.0% | |
| ! | AGACCAACTATAAGTCTTTT+GGG | - | chr7_3:53261857-53261876 | None:intergenic | 30.0% |
| TTGGTCTGAAAAAATCTCAT+GGG | + | chr7_3:53261870-53261889 | Msa1109600:intron | 30.0% | |
| ATAAAATGTGAACCAATGTC+TGG | + | chr7_3:53261904-53261923 | Msa1109600:intron | 30.0% | |
| TAAAATGTGAACCAATGTCT+GGG | + | chr7_3:53261905-53261924 | Msa1109600:intron | 30.0% | |
| ACATTAGAAATACTGCACAT+TGG | + | chr7_3:53262143-53262162 | Msa1109600:intron | 30.0% | |
| AAAGCAGCATAATCAACATA+TGG | - | chr7_3:53262312-53262331 | None:intergenic | 30.0% | |
| ATCCATATATCATCATACAG+TGG | + | chr7_3:53262385-53262404 | Msa1109600:intron | 30.0% | |
| TCCATATATCATCATACAGT+GGG | + | chr7_3:53262386-53262405 | Msa1109600:intron | 30.0% | |
| GGACTTTCATTTGCAAAAAA+AGG | + | chr7_3:53262415-53262434 | Msa1109600:CDS | 30.0% | |
| ! | GGTGTGTACTAAATTACTTT+TGG | + | chr7_3:53262559-53262578 | Msa1109600:intron | 30.0% |
| TAGACTACGAGTTATAAGTT+GGG | + | chr7_3:53262680-53262699 | Msa1109600:CDS | 30.0% | |
| TGACACTTACCATATCATTA+GGG | - | chr7_3:53262731-53262750 | None:intergenic | 30.0% | |
| ATGACACTTACCATATCATT+AGG | - | chr7_3:53262732-53262751 | None:intergenic | 30.0% | |
| ! | GTAAGTGTCATTACTTATTG+TGG | + | chr7_3:53262741-53262760 | Msa1109600:intron | 30.0% |
| ATAGCGAAAGTTCAAAGAAA+AGG | + | chr7_3:53263142-53263161 | Msa1109600:CDS | 30.0% | |
| ATGGAATTTGGATGCAATAA+AGG | - | chr7_3:53263175-53263194 | None:intergenic | 30.0% | |
| GAGAATGTGGTATTAAATGT+GGG | + | chr7_3:53263288-53263307 | Msa1109600:CDS | 30.0% | |
| TTAGTATATCTGACCTTTCT+TGG | - | chr7_3:53263352-53263371 | None:intergenic | 30.0% | |
| ! | TTTTCTTACACCCTCATTTT+TGG | + | chr7_3:53263385-53263404 | Msa1109600:intron | 30.0% |
| CTAAATGGAACCAAAAATGA+GGG | - | chr7_3:53263398-53263417 | None:intergenic | 30.0% | |
| TTGAAAAACAACTCACACTA+GGG | - | chr7_3:53263475-53263494 | None:intergenic | 30.0% | |
| !!! | TGTTCATTTTTAGGATAGAC+GGG | + | chr7_3:53263513-53263532 | Msa1109600:intron | 30.0% |
| GAGAAATAAGGGTAGAAAAA+TGG | + | chr7_3:53263553-53263572 | Msa1109600:intron | 30.0% | |
| GAATAGGATCTCTACTTTAA+GGG | - | chr7_3:53263634-53263653 | None:intergenic | 30.0% | |
| TGAATAGGATCTCTACTTTA+AGG | - | chr7_3:53263635-53263654 | None:intergenic | 30.0% | |
| ! | GTTAGGTTATCTTTGTGTTT+TGG | + | chr7_3:53264007-53264026 | Msa1109600:intron | 30.0% |
| !! | GATTACTGTTTTATTGACAG+CGG | + | chr7_3:53264068-53264087 | Msa1109600:intron | 30.0% |
| !! | GAACTCACGATAGTTATTTT+AGG | + | chr7_3:53264159-53264178 | Msa1109600:intron | 30.0% |
| ACACCTTAGCAAAAACTATA+TGG | - | chr7_3:53264240-53264259 | None:intergenic | 30.0% | |
| ! | TAAAGCTAATCATGAGTTGA+AGG | - | chr7_3:53264278-53264297 | None:intergenic | 30.0% |
| ATCCAAATGAGCAAACAATT+GGG | + | chr7_3:53264549-53264568 | Msa1109600:CDS | 30.0% | |
| ACTGACTAATCTCAATTTAC+TGG | + | chr7_3:53264577-53264596 | Msa1109600:CDS | 30.0% | |
| AGTTCATAATAACCTGCAAA+AGG | - | chr7_3:53264866-53264885 | None:intergenic | 30.0% | |
| ATATATGTTTAGTATGCCAG+AGG | + | chr7_3:53264983-53265002 | Msa1109600:intron | 30.0% | |
| TATATGTTTAGTATGCCAGA+GGG | + | chr7_3:53264984-53265003 | Msa1109600:intron | 30.0% | |
| AAGTAAGTTAAATGCTCCAT+GGG | - | chr7_3:53265214-53265233 | None:intergenic | 30.0% | |
| !! | AATTTTGACCAACAAATTCC+TGG | - | chr7_3:53265409-53265428 | None:intergenic | 30.0% |
| TTCTTTCTTTCTCATTCTAG+GGG | + | chr7_3:53265629-53265648 | Msa1109600:intron | 30.0% | |
| ! | TACAATGCTTTTCTTAAGCA+CGG | - | chr7_3:53265865-53265884 | None:intergenic | 30.0% |
| ATGAAAATAGTGTGTTGCAA+TGG | - | chr7_3:53266070-53266089 | None:intergenic | 30.0% | |
| AAAAGGCAAGAATTACTAGT+TGG | - | chr7_3:53266235-53266254 | None:intergenic | 30.0% | |
| TTGGAAGACAGATTTAAAAG+TGG | - | chr7_3:53266296-53266315 | None:intergenic | 30.0% | |
| !! | TTATGATCGACTTGTGTTTA+TGG | + | chr7_3:53266390-53266409 | Msa1109600:intron | 30.0% |
| GTTATCAATTGCTAATAGCT+GGG | - | chr7_3:53266678-53266697 | None:intergenic | 30.0% | |
| TGTTATCAATTGCTAATAGC+TGG | - | chr7_3:53266679-53266698 | None:intergenic | 30.0% | |
| ACCTTTGTTCCAAACCTTAA+AGG | + | chr7_3:53259062-53259081 | Msa1109600:intron | 35.0% | |
| CCTTTGTTCCAAACCTTAAA+GGG | + | chr7_3:53259063-53259082 | Msa1109600:intron | 35.0% | |
| !! | GAAAATGACCCTTTAAGGTT+TGG | - | chr7_3:53259074-53259093 | None:intergenic | 35.0% |
| TGTACGAAAATGACCCTTTA+AGG | - | chr7_3:53259079-53259098 | None:intergenic | 35.0% | |
| !! | TTAAAGGGTCATTTTCGTAC+AGG | + | chr7_3:53259078-53259097 | Msa1109600:intron | 35.0% |
| !! | GTCATTTTCGTACAGGTTTA+GGG | + | chr7_3:53259085-53259104 | Msa1109600:intron | 35.0% |
| ! | TAAGTTTTGCGAGACTGTTT+GGG | + | chr7_3:53259272-53259291 | Msa1109600:intron | 35.0% |
| ATAGCCCTAAGCATCATTAA+AGG | - | chr7_3:53259504-53259523 | None:intergenic | 35.0% | |
| TGGAAAATAAGCTGCTAATG+TGG | + | chr7_3:53259527-53259546 | Msa1109600:intron | 35.0% | |
| GGAAAATAAGCTGCTAATGT+GGG | + | chr7_3:53259528-53259547 | Msa1109600:intron | 35.0% | |
| AGACTTCTGAATTGGATCTT+AGG | + | chr7_3:53259655-53259674 | Msa1109600:intron | 35.0% | |
| !!! | CTGCTCAGTTTTGTTGTTTT+AGG | - | chr7_3:53259729-53259748 | None:intergenic | 35.0% |
| ! | CAAAGCTTACTTTGATTTCG+TGG | - | chr7_3:53259754-53259773 | None:intergenic | 35.0% |
| TTATCATTGAGTGACCCAAT+TGG | + | chr7_3:53260253-53260272 | Msa1109600:intron | 35.0% | |
| TATCATTGAGTGACCCAATT+GGG | + | chr7_3:53260254-53260273 | Msa1109600:intron | 35.0% | |
| TGTTTGAAGGTTAACTGAGA+TGG | + | chr7_3:53260371-53260390 | Msa1109600:intron | 35.0% | |
| GTTAAAGGAACCTGTTCTTA+CGG | + | chr7_3:53260404-53260423 | Msa1109600:CDS | 35.0% | |
| CCAAACATCAAATGCAGAAA+GGG | - | chr7_3:53260505-53260524 | None:intergenic | 35.0% | |
| ACCAAACATCAAATGCAGAA+AGG | - | chr7_3:53260506-53260525 | None:intergenic | 35.0% | |
| GTAAATTCAAGGAAGCAGTT+TGG | - | chr7_3:53260855-53260874 | None:intergenic | 35.0% | |
| ATGCAAATTGATCGTTGGAT+TGG | - | chr7_3:53261012-53261031 | None:intergenic | 35.0% | |
| CAACAATGCAAATTGATCGT+TGG | - | chr7_3:53261017-53261036 | None:intergenic | 35.0% | |
| ! | CAGATTTGGAATACAAACAG+TGG | + | chr7_3:53261130-53261149 | Msa1109600:intron | 35.0% |
| ATATCATGAACTCCATCTGA+TGG | - | chr7_3:53261178-53261197 | None:intergenic | 35.0% | |
| TTACTTTCTCCATTGTGTTG+TGG | + | chr7_3:53261423-53261442 | Msa1109600:intron | 35.0% | |
| TACTTTCTCCATTGTGTTGT+GGG | + | chr7_3:53261424-53261443 | Msa1109600:intron | 35.0% | |
| ! | TTACTTATTAGCTCTCGGAA+CGG | + | chr7_3:53261487-53261506 | Msa1109600:CDS | 35.0% |
| TTCAAATGACAGAAATACCC+GGG | - | chr7_3:53261581-53261600 | None:intergenic | 35.0% | |
| CAACAATGCATGGAGATTAA+AGG | - | chr7_3:53261716-53261735 | None:intergenic | 35.0% | |
| AAGTTTCTCCAAGATAACCA+AGG | - | chr7_3:53261789-53261808 | None:intergenic | 35.0% | |
| ! | CAGACCAACTATAAGTCTTT+TGG | - | chr7_3:53261858-53261877 | None:intergenic | 35.0% |
| ! | GTTGGTCTGAAAAAATCTCA+TGG | + | chr7_3:53261869-53261888 | Msa1109600:intron | 35.0% |
| TCTGAAAAAATCTCATGGGT+GGG | + | chr7_3:53261874-53261893 | Msa1109600:intron | 35.0% | |
| TTGCTTCATTTCATAGGGTA+GGG | - | chr7_3:53261970-53261989 | None:intergenic | 35.0% | |
| ATTGCTTCATTTCATAGGGT+AGG | - | chr7_3:53261971-53261990 | None:intergenic | 35.0% | |
| ATTTATGCCAACCCTTTCTT+CGG | + | chr7_3:53262056-53262075 | Msa1109600:intron | 35.0% | |
| AGTGTATGAAACCGAAGAAA+GGG | - | chr7_3:53262070-53262089 | None:intergenic | 35.0% | |
| AGTCTATGTAATTGTGAACG+AGG | + | chr7_3:53262103-53262122 | Msa1109600:intron | 35.0% | |
| GTCTATGTAATTGTGAACGA+GGG | + | chr7_3:53262104-53262123 | Msa1109600:intron | 35.0% | |
| TCCCACTGTATGATGATATA+TGG | - | chr7_3:53262390-53262409 | None:intergenic | 35.0% | |
| ! | TTTGTGTTGTTGGACATGAT+GGG | + | chr7_3:53262446-53262465 | Msa1109600:CDS | 35.0% |
| AAAAAAGTCCATCTCTTCAC+TGG | + | chr7_3:53262525-53262544 | Msa1109600:CDS | 35.0% | |
| CTAGACTACGAGTTATAAGT+TGG | + | chr7_3:53262679-53262698 | Msa1109600:CDS | 35.0% | |
| CGATGTATATTTCCCTGTTA+AGG | - | chr7_3:53262820-53262839 | None:intergenic | 35.0% | |
| ! | GTAAACATCTTCAAGTTTGG+AGG | + | chr7_3:53262890-53262909 | Msa1109600:CDS | 35.0% |
| TTAAGTTTAGGAACTGTGAG+TGG | + | chr7_3:53262919-53262938 | Msa1109600:CDS | 35.0% | |
| TAAATCATCTTCATTGCCAC+CGG | - | chr7_3:53262995-53263014 | None:intergenic | 35.0% | |
| AATTTGAATGCCTCTTCTGA+AGG | + | chr7_3:53263060-53263079 | Msa1109600:CDS | 35.0% | |
| ! | TTCGACTTTGTCTGTTTTCA+AGG | - | chr7_3:53263109-53263128 | None:intergenic | 35.0% |
| AGACAAAGTCGAAAGTGATA+AGG | + | chr7_3:53263116-53263135 | Msa1109600:CDS | 35.0% | |
| GGAGAATGTGGTATTAAATG+TGG | + | chr7_3:53263287-53263306 | Msa1109600:CDS | 35.0% | |
| ATATCTGACCTTTCTTGGAA+AGG | - | chr7_3:53263347-53263366 | None:intergenic | 35.0% | |
| CCTAAATGGAACCAAAAATG+AGG | - | chr7_3:53263399-53263418 | None:intergenic | 35.0% | |
| !!! | CCTCATTTTTGGTTCCATTT+AGG | + | chr7_3:53263396-53263415 | Msa1109600:intron | 35.0% |
| GTTGAAAAACAACTCACACT+AGG | - | chr7_3:53263476-53263495 | None:intergenic | 35.0% | |
| GTGAATGCATGATTGTGAAT+AGG | - | chr7_3:53263650-53263669 | None:intergenic | 35.0% | |
| CAAACTTTCTCCATCATCTT+TGG | + | chr7_3:53263985-53264004 | Msa1109600:intron | 35.0% | |
| TTTCTCCATCATCTTTGGTT+AGG | + | chr7_3:53263990-53264009 | Msa1109600:intron | 35.0% | |
| GATAACCTAACCAAAGATGA+TGG | - | chr7_3:53263998-53264017 | None:intergenic | 35.0% | |
| !! | TGTTTTGGATCCCATTTTCT+TGG | + | chr7_3:53264022-53264041 | Msa1109600:intron | 35.0% |
| GAGCAAAAGACCAAGAAAAT+GGG | - | chr7_3:53264035-53264054 | None:intergenic | 35.0% | |
| GATTACTCATCATACCAAAG+TGG | - | chr7_3:53264361-53264380 | None:intergenic | 35.0% | |
| AAATAAATTGGAGTGGAGTG+AGG | - | chr7_3:53264433-53264452 | None:intergenic | 35.0% | |
| GATCCAAATGAGCAAACAAT+TGG | + | chr7_3:53264548-53264567 | Msa1109600:CDS | 35.0% | |
| TCCAAATGAGCAAACAATTG+GGG | + | chr7_3:53264550-53264569 | Msa1109600:CDS | 35.0% | |
| ATAAACACAGTTCAGTACAC+AGG | - | chr7_3:53264792-53264811 | None:intergenic | 35.0% | |
| AGATAAGTGATCGAGAAAGT+GGG | - | chr7_3:53264832-53264851 | None:intergenic | 35.0% | |
| ATTAAGTAGTTTGAGGACGT+TGG | - | chr7_3:53264910-53264929 | None:intergenic | 35.0% | |
| ATATGTTTAGTATGCCAGAG+GGG | + | chr7_3:53264985-53265004 | Msa1109600:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr7_3:53265081-53265100 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr7_3:53265080-53265099 | Msa1109600:intron | 35.0% | |
| AACATATAAAAAGGGCAACC+CGG | - | chr7_3:53265172-53265191 | None:intergenic | 35.0% | |
| CAAGTAAGTTAAATGCTCCA+TGG | - | chr7_3:53265215-53265234 | None:intergenic | 35.0% | |
| ! | CATGGAGCATTTAACTTACT+TGG | + | chr7_3:53265213-53265232 | Msa1109600:intron | 35.0% |
| ! | AGTTTTCCATCTTGCTTGTA+AGG | + | chr7_3:53265286-53265305 | Msa1109600:intron | 35.0% |
| ! | GTTTTCCATCTTGCTTGTAA+GGG | + | chr7_3:53265287-53265306 | Msa1109600:intron | 35.0% |
| GCTTTCTCTACGAAAATCAA+TGG | - | chr7_3:53265352-53265371 | None:intergenic | 35.0% | |
| !! | GGTCAAAATTTTGGTCCTTT+AGG | + | chr7_3:53265419-53265438 | Msa1109600:intron | 35.0% |
| TTTAGCAGCAACCAAACAAA+TGG | + | chr7_3:53265498-53265517 | Msa1109600:intron | 35.0% | |
| ! | GGGTAATTGGTAGTTATCTT+AGG | + | chr7_3:53265996-53266015 | Msa1109600:intron | 35.0% |
| TGCTACAATACAGTATGACA+AGG | + | chr7_3:53266039-53266058 | Msa1109600:intron | 35.0% | |
| ATACTTGACATGCTTGTGAA+AGG | + | chr7_3:53266180-53266199 | Msa1109600:intron | 35.0% | |
| TGTCTAAGAAACTTGAGAGT+TGG | - | chr7_3:53266315-53266334 | None:intergenic | 35.0% | |
| TTCTTAGACATCCTTTACAC+CGG | + | chr7_3:53266325-53266344 | Msa1109600:CDS | 35.0% | |
| TTCTTTCTGCTGTCTACAAA+TGG | + | chr7_3:53266355-53266374 | Msa1109600:intron | 35.0% | |
| AACAGTGCCAATTATCTATG+TGG | + | chr7_3:53266463-53266482 | Msa1109600:CDS | 35.0% | |
| ACTGACAAAGATAGCAAAGA+AGG | + | chr7_3:53266527-53266546 | Msa1109600:CDS | 35.0% | |
| CTGACAAAGATAGCAAAGAA+GGG | + | chr7_3:53266528-53266547 | Msa1109600:CDS | 35.0% | |
| TGACAAAGATAGCAAAGAAG+GGG | + | chr7_3:53266529-53266548 | Msa1109600:CDS | 35.0% | |
| GATAATCTTAGTGACGTTGA+AGG | + | chr7_3:53266572-53266591 | Msa1109600:CDS | 35.0% | |
| AAAGAACCAAAAACGTGTAC+AGG | - | chr7_3:53266631-53266650 | None:intergenic | 35.0% | |
| TGTGGACAAGCAAATGTATA+TGG | - | chr7_3:53266765-53266784 | None:intergenic | 35.0% | |
| ! | CTGAAGGTGTAAACTGTGAA+GGG | - | chr7_3:53259004-53259023 | None:intergenic | 40.0% |
| GAAAGGGAAAACAAACCTGA+AGG | - | chr7_3:53259020-53259039 | None:intergenic | 40.0% | |
| TTGGAACAAAGGTTCAATGG+AGG | - | chr7_3:53259055-53259074 | None:intergenic | 40.0% | |
| ! | GGTTTGGAACAAAGGTTCAA+TGG | - | chr7_3:53259058-53259077 | None:intergenic | 40.0% |
| !! | CCCTTTAAGGTTTGGAACAA+AGG | - | chr7_3:53259066-53259085 | None:intergenic | 40.0% |
| !! | GGTCATTTTCGTACAGGTTT+AGG | + | chr7_3:53259084-53259103 | Msa1109600:intron | 40.0% |
| ! | GTAAGTTTTGCGAGACTGTT+TGG | + | chr7_3:53259271-53259290 | Msa1109600:intron | 40.0% |
| GCATCATTAAAGGCCCTATT+TGG | - | chr7_3:53259494-53259513 | None:intergenic | 40.0% | |
| TAGGGCCTTTAATGATGCTT+AGG | + | chr7_3:53259496-53259515 | Msa1109600:intron | 40.0% | |
| AGGGCCTTTAATGATGCTTA+GGG | + | chr7_3:53259497-53259516 | Msa1109600:intron | 40.0% | |
| ATGATGCTTAGGGCTATATG+TGG | + | chr7_3:53259507-53259526 | Msa1109600:intron | 40.0% | |
| TCTCCAGCTCATGGTTTAAT+TGG | - | chr7_3:53259638-53259657 | None:intergenic | 40.0% | |
| TCTGAATTGGATCTTAGGTC+CGG | + | chr7_3:53259660-53259679 | Msa1109600:intron | 40.0% | |
| !! | GGTACCTCTTTGTTGTTTGA+AGG | + | chr7_3:53260358-53260377 | Msa1109600:intron | 40.0% |
| AAGGTTAACTGAGATGGTGA+AGG | + | chr7_3:53260377-53260396 | Msa1109600:intron | 40.0% | |
| AGGTTAACTGAGATGGTGAA+GGG | + | chr7_3:53260378-53260397 | Msa1109600:intron | 40.0% | |
| GATGGTGAAGGGTAAGTTAA+AGG | + | chr7_3:53260389-53260408 | Msa1109600:CDS | 40.0% | |
| ATAGCTGCATAGTCACCATT+AGG | - | chr7_3:53260438-53260457 | None:intergenic | 40.0% | |
| CAGCTATTCTGTCTGCAAAT+GGG | + | chr7_3:53260451-53260470 | Msa1109600:CDS | 40.0% | |
| TATTCTGTCTGCAAATGGGA+CGG | + | chr7_3:53260455-53260474 | Msa1109600:CDS | 40.0% | |
| AAATGCAGAAAGGGAGATGA+AGG | - | chr7_3:53260496-53260515 | None:intergenic | 40.0% | |
| CCCTTTCTGCATTTGATGTT+TGG | + | chr7_3:53260502-53260521 | Msa1109600:intron | 40.0% | |
| TGTATTGCATGCAGTTTCAC+TGG | + | chr7_3:53261208-53261227 | Msa1109600:CDS | 40.0% | |
| GTATTGCATGCAGTTTCACT+GGG | + | chr7_3:53261209-53261228 | Msa1109600:CDS | 40.0% | |
| ATGCAGTTTCACTGGGAAAA+AGG | + | chr7_3:53261216-53261235 | Msa1109600:CDS | 40.0% | |
| TAATTTCATCAAAGCCCCCA+AGG | + | chr7_3:53261288-53261307 | Msa1109600:intron | 40.0% | |
| ! | GGACCTTACTTATTAGCTCT+CGG | + | chr7_3:53261482-53261501 | Msa1109600:CDS | 40.0% |
| GTTCCGAGAGCTAATAAGTA+AGG | - | chr7_3:53261488-53261507 | None:intergenic | 40.0% | |
| GGAGAAACTTGAGCATTCTT+TGG | + | chr7_3:53261799-53261818 | Msa1109600:intron | 40.0% | |
| GGACCCAAAAGACTTATAGT+TGG | + | chr7_3:53261851-53261870 | Msa1109600:intron | 40.0% | |
| GTCTGAAAAAATCTCATGGG+TGG | + | chr7_3:53261873-53261892 | Msa1109600:intron | 40.0% | |
| TAGGGAAGATTCTTAGGCAA+TGG | - | chr7_3:53261952-53261971 | None:intergenic | 40.0% | |
| ATAGGGTAGGGAAGATTCTT+AGG | - | chr7_3:53261958-53261977 | None:intergenic | 40.0% | |
| TATGAAACCGAAGAAAGGGT+TGG | - | chr7_3:53262066-53262085 | None:intergenic | 40.0% | |
| CAGTGTATGAAACCGAAGAA+AGG | - | chr7_3:53262071-53262090 | None:intergenic | 40.0% | |
| CTTTCTTCGGTTTCATACAC+TGG | + | chr7_3:53262069-53262088 | Msa1109600:intron | 40.0% | |
| TCATCATACAGTGGGATTTG+CGG | + | chr7_3:53262394-53262413 | Msa1109600:intron | 40.0% | |
| ! | CTTTGTGTTGTTGGACATGA+TGG | + | chr7_3:53262445-53262464 | Msa1109600:CDS | 40.0% |
| TGAAACAGGAGAGCTTCTAA+AGG | + | chr7_3:53262489-53262508 | Msa1109600:CDS | 40.0% | |
| GTTACATGGTAGTTGACACT+CGG | + | chr7_3:53262610-53262629 | Msa1109600:intron | 40.0% | |
| ! | CGAGTTATAAGTTGGGAAAC+TGG | + | chr7_3:53262687-53262706 | Msa1109600:CDS | 40.0% |
| AAGTTGGGAAACTGGTAAAG+AGG | + | chr7_3:53262695-53262714 | Msa1109600:CDS | 40.0% | |
| ! | TCTGAAGTGCCCTAATGATA+TGG | + | chr7_3:53262719-53262738 | Msa1109600:CDS | 40.0% |
| ! | TGGAGGTGTGACTTAAGTTT+AGG | + | chr7_3:53262907-53262926 | Msa1109600:CDS | 40.0% |
| CTTCAGGTGGAACTTACATA+TGG | + | chr7_3:53263034-53263053 | Msa1109600:CDS | 40.0% | |
| TGCATCCAAATTCCATTCCA+TGG | + | chr7_3:53263179-53263198 | Msa1109600:CDS | 40.0% | |
| GCATCCAAATTCCATTCCAT+GGG | + | chr7_3:53263180-53263199 | Msa1109600:CDS | 40.0% | |
| CATCCAAATTCCATTCCATG+GGG | + | chr7_3:53263181-53263200 | Msa1109600:CDS | 40.0% | |
| ATCCAAATTCCATTCCATGG+GGG | + | chr7_3:53263182-53263201 | Msa1109600:CDS | 40.0% | |
| !! | ATGCAAGCTGTGTTGACTTA+TGG | + | chr7_3:53263216-53263235 | Msa1109600:CDS | 40.0% |
| TAGTGATTTAGGGGAGAATG+TGG | + | chr7_3:53263275-53263294 | Msa1109600:CDS | 40.0% | |
| !! | TCTTATTTCTGTCTGTCGCT+TGG | + | chr7_3:53263824-53263843 | Msa1109600:intron | 40.0% |
| ACTGAAAGCAGCAGTAGAAA+AGG | + | chr7_3:53263848-53263867 | Msa1109600:intron | 40.0% | |
| ! | ACAACTGACAAGGTGGATTT+GGG | + | chr7_3:53263924-53263943 | Msa1109600:CDS | 40.0% |
| GGAGCAAAAGACCAAGAAAA+TGG | - | chr7_3:53264036-53264055 | None:intergenic | 40.0% | |
| TTCAAATGTGCGTACCACTT+TGG | + | chr7_3:53264344-53264363 | Msa1109600:intron | 40.0% | |
| GATCAATGTGAGGTTGTTGA+CGG | + | chr7_3:53264512-53264531 | Msa1109600:intron | 40.0% | |
| GCTCATTTGGATCATCATCA+AGG | - | chr7_3:53264541-53264560 | None:intergenic | 40.0% | |
| TCCCCAATTGTTTGCTCATT+TGG | - | chr7_3:53264554-53264573 | None:intergenic | 40.0% | |
| ! | AACTTGCTCTTTGTCACTCT+TGG | - | chr7_3:53264648-53264667 | None:intergenic | 40.0% |
| ACATCTACACTATCTGCACT+TGG | - | chr7_3:53264683-53264702 | None:intergenic | 40.0% | |
| GTACAAGCAATCCAGAAGAA+GGG | - | chr7_3:53264741-53264760 | None:intergenic | 40.0% | |
| TGTACAAGCAATCCAGAAGA+AGG | - | chr7_3:53264742-53264761 | None:intergenic | 40.0% | |
| CAGATAAGTGATCGAGAAAG+TGG | - | chr7_3:53264833-53264852 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr7_3:53265074-53265093 | Msa1109600:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr7_3:53265075-53265094 | Msa1109600:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr7_3:53265106-53265125 | Msa1109600:intron | 40.0% | |
| GTTAACAGCCAGGAATTTGT+TGG | + | chr7_3:53265398-53265417 | Msa1109600:intron | 40.0% | |
| !! | TCATTCTAGGGGTGCAATTT+TGG | + | chr7_3:53265640-53265659 | Msa1109600:intron | 40.0% |
| AGAAGTAGACATTTCAGCCA+TGG | - | chr7_3:53265677-53265696 | None:intergenic | 40.0% | |
| TTCAAGTGAGTTCTGCATGA+TGG | + | chr7_3:53265756-53265775 | Msa1109600:CDS | 40.0% | |
| GGCAAGAATTACTAGTTGGT+TGG | - | chr7_3:53266231-53266250 | None:intergenic | 40.0% | |
| TCTTAGACATCCTTTACACC+GGG | + | chr7_3:53266326-53266345 | Msa1109600:CDS | 40.0% | |
| GTGCTTGGTTTCTGTTGAAT+AGG | + | chr7_3:53266412-53266431 | Msa1109600:intron | 40.0% | |
| GCCAATTATCTATGTGGACA+CGG | + | chr7_3:53266469-53266488 | Msa1109600:CDS | 40.0% | |
| TCCGTGTCCACATAGATAAT+TGG | - | chr7_3:53266473-53266492 | None:intergenic | 40.0% | |
| ! | TGATAGTGAAAGAGAATCCG+AGG | + | chr7_3:53266493-53266512 | Msa1109600:CDS | 40.0% |
| TGAAGGTAGTGATGGTATGA+TGG | + | chr7_3:53266589-53266608 | Msa1109600:CDS | 40.0% | |
| TGCTAATAGCTGGGACTTAA+TGG | - | chr7_3:53266669-53266688 | None:intergenic | 40.0% | |
| CTCAAAACTGTGATGCTTTG+TGG | - | chr7_3:53266783-53266802 | None:intergenic | 40.0% | |
| ! | CCTGAAGGTGTAAACTGTGA+AGG | - | chr7_3:53259005-53259024 | None:intergenic | 45.0% |
| CCTTCACAGTTTACACCTTC+AGG | + | chr7_3:53259002-53259021 | Msa1109600:CDS | 45.0% | |
| GTTCAATGGAGGAGTAACGA+GGG | - | chr7_3:53259044-53259063 | None:intergenic | 45.0% | |
| GGACCAATTAAACCATGAGC+TGG | + | chr7_3:53259632-53259651 | Msa1109600:intron | 45.0% | |
| ATTCAGAAGTCTCCAGCTCA+TGG | - | chr7_3:53259647-53259666 | None:intergenic | 45.0% | |
| TGAGCTGGAGACTTCTGAAT+TGG | + | chr7_3:53259647-53259666 | Msa1109600:intron | 45.0% | |
| ! | TACTGCCTTGTTAACGCAAC+TGG | + | chr7_3:53259833-53259852 | Msa1109600:intron | 45.0% |
| GAAGTCCAGTTGCGTTAACA+AGG | - | chr7_3:53259841-53259860 | None:intergenic | 45.0% | |
| TCCAAACCAAGAGCCCAATT+GGG | - | chr7_3:53260270-53260289 | None:intergenic | 45.0% | |
| ATCCAAACCAAGAGCCCAAT+TGG | - | chr7_3:53260271-53260290 | None:intergenic | 45.0% | |
| CTTACGGCTTTCACACCTAA+TGG | + | chr7_3:53260420-53260439 | Msa1109600:CDS | 45.0% | |
| GCAGCTATTCTGTCTGCAAA+TGG | + | chr7_3:53260450-53260469 | Msa1109600:CDS | 45.0% | |
| !! | GTGGAGATTTGTTAGCAGAG+TGG | + | chr7_3:53261149-53261168 | Msa1109600:CDS | 45.0% |
| TCACTGGGAAAAAGGTAGTG+TGG | + | chr7_3:53261224-53261243 | Msa1109600:intron | 45.0% | |
| ! | CATTGTTTGCCCTTCTGAAG+AGG | - | chr7_3:53261374-53261393 | None:intergenic | 45.0% |
| TAAAGCAGCCCACAACACAA+TGG | - | chr7_3:53261435-53261454 | None:intergenic | 45.0% | |
| TTGATGTTTCCACTGGTGAG+AGG | + | chr7_3:53261531-53261550 | Msa1109600:CDS | 45.0% | |
| TGACAGAAATACCCGGGAAT+CGG | - | chr7_3:53261575-53261594 | None:intergenic | 45.0% | |
| CTGCATGAATACCCAGACAT+TGG | - | chr7_3:53261919-53261938 | None:intergenic | 45.0% | |
| ATGGACGTCACTTGTGAAAC+TGG | - | chr7_3:53262293-53262312 | None:intergenic | 45.0% | |
| GGACAGCTTCTTTGTGTTGT+TGG | + | chr7_3:53262436-53262455 | Msa1109600:CDS | 45.0% | |
| ! | TGTTGTTGGACATGATGGGA+AGG | + | chr7_3:53262450-53262469 | Msa1109600:CDS | 45.0% |
| TGAGAAAGCCAGTGAAGAGA+TGG | - | chr7_3:53262536-53262555 | None:intergenic | 45.0% | |
| !! | TCTTCACTGGCTTTCTCACA+TGG | + | chr7_3:53262538-53262557 | Msa1109600:CDS | 45.0% |
| AGTTTAGGAACTGTGAGTGG+TGG | + | chr7_3:53262922-53262941 | Msa1109600:CDS | 45.0% | |
| GAGTGGCAATCAAGAACCAA+TGG | - | chr7_3:53262973-53262992 | None:intergenic | 45.0% | |
| ! | TTGGTTCTTGATTGCCACTC+CGG | + | chr7_3:53262973-53262992 | Msa1109600:CDS | 45.0% |
| GTGTACTTGACCTTCAGAAG+AGG | - | chr7_3:53263073-53263092 | None:intergenic | 45.0% | |
| TTCCCCCATGGAATGGAATT+TGG | - | chr7_3:53263187-53263206 | None:intergenic | 45.0% | |
| AAGGCTGTCATGCTTCTGAA+TGG | - | chr7_3:53263328-53263347 | None:intergenic | 45.0% | |
| CATGACAGCCTTTCCAAGAA+AGG | + | chr7_3:53263336-53263355 | Msa1109600:CDS | 45.0% | |
| AAAACAACTCACACTAGGGC+AGG | - | chr7_3:53263471-53263490 | None:intergenic | 45.0% | |
| TCAGTTGTGGTTGGAAGATC+AGG | - | chr7_3:53263912-53263931 | None:intergenic | 45.0% | |
| TCTTCCAACCACAACTGACA+AGG | + | chr7_3:53263914-53263933 | Msa1109600:CDS | 45.0% | |
| CAAATCCACCTTGTCAGTTG+TGG | - | chr7_3:53263925-53263944 | None:intergenic | 45.0% | |
| ! | CACAACTGACAAGGTGGATT+TGG | + | chr7_3:53263923-53263942 | Msa1109600:CDS | 45.0% |
| ATCCAAGAATGACACAGAGC+TGG | + | chr7_3:53264610-53264629 | Msa1109600:CDS | 45.0% | |
| ! | ATCCAGCTCTGTGTCATTCT+TGG | - | chr7_3:53264615-53264634 | None:intergenic | 45.0% |
| TCTACACTATCTGCACTTGG+AGG | - | chr7_3:53264680-53264699 | None:intergenic | 45.0% | |
| CTTGTACACGCAAGATGAGA+AGG | + | chr7_3:53264754-53264773 | Msa1109600:CDS | 45.0% | |
| ! | TGTGATGCAACTCCTTTTGC+AGG | + | chr7_3:53264851-53264870 | Msa1109600:intron | 45.0% |
| GTAGTTTGAGGACGTTGGAT+GGG | - | chr7_3:53264905-53264924 | None:intergenic | 45.0% | |
| AGTAGTTTGAGGACGTTGGA+TGG | - | chr7_3:53264906-53264925 | None:intergenic | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | + | chr7_3:53265030-53265049 | Msa1109600:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr7_3:53265070-53265089 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr7_3:53265102-53265121 | Msa1109600:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr7_3:53265105-53265124 | Msa1109600:intron | 45.0% | |
| TGGCAGATGTCTTACATGAG+TGG | + | chr7_3:53265233-53265252 | Msa1109600:intron | 45.0% | |
| TTCCATCTTGCTTGTAAGGG+AGG | + | chr7_3:53265290-53265309 | Msa1109600:intron | 45.0% | |
| TCCATCTTGCTTGTAAGGGA+GGG | + | chr7_3:53265291-53265310 | Msa1109600:intron | 45.0% | |
| GCAAAGAGATGATACTCTCC+TGG | + | chr7_3:53265376-53265395 | Msa1109600:intron | 45.0% | |
| CAAATTCCTGGCTGTTAACC+AGG | - | chr7_3:53265397-53265416 | None:intergenic | 45.0% | |
| ! | TTTTGGCATGTGCTCTTCCA+TGG | + | chr7_3:53265657-53265676 | Msa1109600:CDS | 45.0% |
| CTACTTCTACAGCATGCAAG+TGG | + | chr7_3:53265689-53265708 | Msa1109600:CDS | 45.0% | |
| TGCAAGTGGAATAATGTCCC+AGG | + | chr7_3:53265703-53265722 | Msa1109600:CDS | 45.0% | |
| CTTAGACATCCTTTACACCG+GGG | + | chr7_3:53266327-53266346 | Msa1109600:CDS | 45.0% | |
| CGACTTGTGTTTATGGTGCT+TGG | + | chr7_3:53266397-53266416 | Msa1109600:intron | 45.0% | |
| TGTTGAATAGGTGCTTGACG+AGG | + | chr7_3:53266424-53266443 | Msa1109600:intron | 45.0% | |
| GCTATCTTTGTCAGTGTCCA+TGG | - | chr7_3:53266522-53266541 | None:intergenic | 45.0% | |
| AGTGACGTTGAAGGTAGTGA+TGG | + | chr7_3:53266581-53266600 | Msa1109600:CDS | 45.0% | |
| ! | ATGTCGCCTGTACACGTTTT+TGG | + | chr7_3:53266622-53266641 | Msa1109600:three_prime_UTR | 45.0% |
| AGGTGTAAACTGTGAAGGGC+CGG | - | chr7_3:53259000-53259019 | None:intergenic | 50.0% | |
| GAGGAGTAACGAGGGAGAAA+GGG | - | chr7_3:53259036-53259055 | None:intergenic | 50.0% | |
| GGTTCAATGGAGGAGTAACG+AGG | - | chr7_3:53259045-53259064 | None:intergenic | 50.0% | |
| AAACAGTGCGAAAGTCGTCC+AGG | + | chr7_3:53259872-53259891 | Msa1109600:intron | 50.0% | |
| ACCCAATTGGGCTCTTGGTT+TGG | + | chr7_3:53260266-53260285 | Msa1109600:intron | 50.0% | |
| GGTGTGAAAGCCGTAAGAAC+AGG | - | chr7_3:53260417-53260436 | None:intergenic | 50.0% | |
| ! | TTAGCTCTCGGAACGGAAGA+TGG | + | chr7_3:53261494-53261513 | Msa1109600:CDS | 50.0% |
| CTCGCTGTTGATGTTTCCAC+TGG | + | chr7_3:53261524-53261543 | Msa1109600:CDS | 50.0% | |
| TTTCCACTGGTGAGAGGAAG+TGG | + | chr7_3:53261537-53261556 | Msa1109600:CDS | 50.0% | |
| CCTACTAGTCATCCGATTCC+CGG | + | chr7_3:53261560-53261579 | Msa1109600:CDS | 50.0% | |
| CTACTAGTCATCCGATTCCC+GGG | + | chr7_3:53261561-53261580 | Msa1109600:CDS | 50.0% | |
| ACCAATGGAGCATGCCTCAA+GGG | - | chr7_3:53262958-53262977 | None:intergenic | 50.0% | |
| AACCAATGGAGCATGCCTCA+AGG | - | chr7_3:53262959-53262978 | None:intergenic | 50.0% | |
| GTCTCAGCAGTTACGTCTTC+AGG | + | chr7_3:53263018-53263037 | Msa1109600:CDS | 50.0% | |
| TCAGCAGTTACGTCTTCAGG+TGG | + | chr7_3:53263021-53263040 | Msa1109600:CDS | 50.0% | |
| TTCCATTCCATGGGGGAAGA+CGG | + | chr7_3:53263189-53263208 | Msa1109600:CDS | 50.0% | |
| TCCAACCACAACTGACAAGG+TGG | + | chr7_3:53263917-53263936 | Msa1109600:CDS | 50.0% | |
| TCCACCTTGTCAGTTGTGGT+TGG | - | chr7_3:53263921-53263940 | None:intergenic | 50.0% | |
| AGCAATCCAGAAGAAGGGTG+CGG | - | chr7_3:53264736-53264755 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr7_3:53265014-53265033 | None:intergenic | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | + | chr7_3:53265036-53265055 | Msa1109600:intron | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | + | chr7_3:53265037-53265056 | Msa1109600:intron | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | - | chr7_3:53265048-53265067 | None:intergenic | 50.0% | |
| TATGCCAGACAGTGTTCCCA+TGG | + | chr7_3:53265195-53265214 | Msa1109600:intron | 50.0% | |
| CCATCTTGCTTGTAAGGGAG+GGG | + | chr7_3:53265292-53265311 | Msa1109600:intron | 50.0% | |
| CATCTTGCTTGTAAGGGAGG+GGG | + | chr7_3:53265293-53265312 | Msa1109600:intron | 50.0% | |
| TACTCTCCTGGTTAACAGCC+AGG | + | chr7_3:53265388-53265407 | Msa1109600:intron | 50.0% | |
| AGAAGCTTACCCCGGTGTAA+AGG | - | chr7_3:53266339-53266358 | None:intergenic | 50.0% | |
| CAGCAGAAAGAAGCTTACCC+CGG | - | chr7_3:53266347-53266366 | None:intergenic | 50.0% | |
| TGAATAGGTGCTTGACGAGG+AGG | + | chr7_3:53266427-53266446 | Msa1109600:intron | 50.0% | |
| AAGAGAATCCGAGGATGCCA+TGG | + | chr7_3:53266502-53266521 | Msa1109600:CDS | 50.0% | |
| GGAGGAGTAACGAGGGAGAA+AGG | - | chr7_3:53259037-53259056 | None:intergenic | 55.0% | |
| GAGTGACCCAATTGGGCTCT+TGG | + | chr7_3:53260261-53260280 | Msa1109600:intron | 55.0% | |
| GCAGAGTGGAAGCCATCAGA+TGG | + | chr7_3:53261163-53261182 | Msa1109600:CDS | 55.0% | |
| CCGGGAATCGGATGACTAGT+AGG | - | chr7_3:53261563-53261582 | None:intergenic | 55.0% | |
| GTGGTCCAACACTACCCTTG+AGG | + | chr7_3:53262941-53262960 | Msa1109600:CDS | 55.0% | |
| GCATGCCTCAAGGGTAGTGT+TGG | - | chr7_3:53262949-53262968 | None:intergenic | 55.0% | |
| ACCCTTGAGGCATGCTCCAT+TGG | + | chr7_3:53262954-53262973 | Msa1109600:CDS | 55.0% | |
| GTTCTTGATTGCCACTCCGG+TGG | + | chr7_3:53262976-53262995 | Msa1109600:CDS | 55.0% | |
| CATCTTCATTGCCACCGGAG+TGG | - | chr7_3:53262990-53263009 | None:intergenic | 55.0% | |
| GAGTGGAGTGAGGAAGTCGA+GGG | - | chr7_3:53264423-53264442 | None:intergenic | 55.0% | |
| AGATGACCGCACCCTTCTTC+TGG | + | chr7_3:53264727-53264746 | Msa1109600:CDS | 55.0% | |
| GTATGCCAGAGGGGTAACCT+TGG | + | chr7_3:53264994-53265013 | Msa1109600:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr7_3:53265049-53265068 | Msa1109600:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr7_3:53265145-53265164 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr7_3:53265146-53265165 | None:intergenic | 55.0% | |
| TGCTCCATGGGAACACTGTC+TGG | - | chr7_3:53265202-53265221 | None:intergenic | 55.0% | |
| CCCCTCCCTTACAAGCAAGA+TGG | - | chr7_3:53265295-53265314 | None:intergenic | 55.0% | |
| CTTGTAAGGGAGGGGGAAAG+AGG | + | chr7_3:53265300-53265319 | Msa1109600:intron | 55.0% | |
| GTCAGTGTCCATGGCATCCT+CGG | - | chr7_3:53266513-53266532 | None:intergenic | 55.0% | |
| TGAAGGGCCGGATGTGTGTG+CGG | - | chr7_3:53258988-53259007 | None:intergenic | 60.0% | |
| AGGCCACTTCCTCTCACCAG+TGG | - | chr7_3:53261543-53261562 | None:intergenic | 60.0% | |
| GTCCGTCTTCCCCCATGGAA+TGG | - | chr7_3:53263194-53263213 | None:intergenic | 60.0% | |
| CATCTGTCCGTCTTCCCCCA+TGG | - | chr7_3:53263199-53263218 | None:intergenic | 60.0% | |
| GGAGTGGAGTGAGGAAGTCG+AGG | - | chr7_3:53264424-53264443 | None:intergenic | 60.0% | |
| TTGCGCCAAGGTTACCCCTC+TGG | - | chr7_3:53265002-53265021 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr7_3:53265003-53265022 | Msa1109600:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr7_3:53265118-53265137 | Msa1109600:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr7_3:53265133-53265152 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr7_3:53265134-53265153 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr7_3:53265133-53265152 | Msa1109600:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr7_3:53265134-53265153 | Msa1109600:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr7_3:53265150-53265169 | Msa1109600:intron | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr7_3:53265120-53265139 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr7_3:53265135-53265154 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr7_3:53265139-53265158 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr7_3:53265140-53265159 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr7_3:53265151-53265170 | Msa1109600:intron | 65.0% | |
| TGTGTGCGGCGGACCGGACA+GGG | - | chr7_3:53258974-53258993 | None:intergenic | 70.0% | |
| CGGATGTGTGTGCGGCGGAC+CGG | - | chr7_3:53258980-53258999 | None:intergenic | 70.0% | |
| CGGTCCGCCGCACACACATC+CGG | + | chr7_3:53258978-53258997 | Msa1109600:CDS | 70.0% | |
| AGGGCCGGATGTGTGTGCGG+CGG | - | chr7_3:53258985-53259004 | None:intergenic | 70.0% | |
| TCCCGCCGCCACTCCCTGTC+CGG | + | chr7_3:53258958-53258977 | Msa1109600:CDS | 75.0% | |
| ACCGGACAGGGAGTGGCGGC+GGG | - | chr7_3:53258962-53258981 | None:intergenic | 75.0% | |
| GACCGGACAGGGAGTGGCGG+CGG | - | chr7_3:53258963-53258982 | None:intergenic | 75.0% | |
| GCGGACCGGACAGGGAGTGG+CGG | - | chr7_3:53258966-53258985 | None:intergenic | 75.0% | |
| GTGTGTGCGGCGGACCGGAC+AGG | - | chr7_3:53258975-53258994 | None:intergenic | 75.0% | |
| ! | GCGGCGGACCGGACAGGGAG+TGG | - | chr7_3:53258969-53258988 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 53258883 | 53266947 | 53258883 | ID=Msa1109600;Name=Msa1109600 |
| chr7_3 | mRNA | 53258883 | 53266947 | 53258883 | ID=Msa1109600-mRNA-1;Parent=Msa1109600;Name=Msa1109600-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.66|0.76|0.92|0.83|0.92|13|328|670 |
| chr7_3 | exon | 53258883 | 53259023 | 53258883 | ID=Msa1109600-mRNA-1:exon:11301;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53260209 | 53260240 | 53260209 | ID=Msa1109600-mRNA-1:exon:11302;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53260380 | 53260482 | 53260380 | ID=Msa1109600-mRNA-1:exon:11303;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53261133 | 53261237 | 53261133 | ID=Msa1109600-mRNA-1:exon:11304;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53261467 | 53261582 | 53261467 | ID=Msa1109600-mRNA-1:exon:11305;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53262405 | 53262559 | 53262405 | ID=Msa1109600-mRNA-1:exon:11306;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53262652 | 53262740 | 53262652 | ID=Msa1109600-mRNA-1:exon:11307;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53262826 | 53263357 | 53262826 | ID=Msa1109600-mRNA-1:exon:11308;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53263859 | 53263945 | 53263859 | ID=Msa1109600-mRNA-1:exon:11309;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53264513 | 53264775 | 53264513 | ID=Msa1109600-mRNA-1:exon:11310;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53265649 | 53265777 | 53265649 | ID=Msa1109600-mRNA-1:exon:11311;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53266274 | 53266348 | 53266274 | ID=Msa1109600-mRNA-1:exon:11312;Parent=Msa1109600-mRNA-1 |
| chr7_3 | exon | 53266434 | 53266947 | 53266434 | ID=Msa1109600-mRNA-1:exon:11313;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53258883 | 53259023 | 53258883 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53260209 | 53260240 | 53260209 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53260380 | 53260482 | 53260380 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53261133 | 53261237 | 53261133 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53261467 | 53261582 | 53261467 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53262405 | 53262559 | 53262405 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53262652 | 53262740 | 53262652 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53262826 | 53263357 | 53262826 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53263859 | 53263945 | 53263859 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53264513 | 53264775 | 53264513 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53265649 | 53265777 | 53265649 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53266274 | 53266348 | 53266274 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | CDS | 53266434 | 53266619 | 53266434 | ID=Msa1109600-mRNA-1:cds;Parent=Msa1109600-mRNA-1 |
| chr7_3 | three_prime_UTR | 53266620 | 53266947 | 53266620 | ID=Msa1109600-mRNA-1:three_prime_utr;Parent=Msa1109600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
