Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110010 | XP_003623559.1 | 97.713 | 481 | 11 | 0 | 1 | 481 | 1 | 481 | 0.0 | 977 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110010 | sp|Q9SR86|AGT23_ARATH | 74.160 | 476 | 115 | 2 | 10 | 481 | 10 | 481 | 0.0 | 756 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110010 | G7KX17 | 97.713 | 481 | 11 | 0 | 1 | 481 | 1 | 481 | 0.0 | 977 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1026140 | Msa1110010 | 0.945154 | 5.186137e-104 | -8.615850e-47 |
| Msa1064890 | Msa1110010 | 0.969920 | 7.748139e-131 | -8.615850e-47 |
| Msa0268070 | Msa1110010 | 0.840365 | 9.085358e-58 | -8.615850e-47 |
| Msa1110010 | Msa1153650 | 0.920987 | 6.365696e-88 | -8.615850e-47 |
| Msa1110010 | Msa1219790 | 0.835870 | 1.304403e-56 | -8.615850e-47 |
| Msa1110010 | Msa1267080 | 0.829894 | 3.987148e-55 | -8.615850e-47 |
| Msa1110010 | Msa1401550 | 0.823860 | 1.103351e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110010 | MtrunA17_Chr7g0244421 | 97.713 | 481 | 11 | 0 | 1 | 481 | 1 | 481 | 0.0 | 977 |
| Msa1110010 | MtrunA17_Chr8g0382871 | 62.343 | 478 | 178 | 1 | 6 | 481 | 4 | 481 | 0.0 | 626 |
| Msa1110010 | MtrunA17_Chr3g0106581 | 67.881 | 302 | 97 | 0 | 24 | 325 | 16 | 317 | 2.11e-156 | 447 |
| Msa1110010 | MtrunA17_Chr7g0233361 | 28.825 | 451 | 274 | 12 | 45 | 478 | 43 | 463 | 3.89e-48 | 172 |
| Msa1110010 | MtrunA17_Chr8g0376561 | 30.713 | 407 | 241 | 14 | 75 | 466 | 44 | 424 | 1.28e-43 | 160 |
| Msa1110010 | MtrunA17_Chr3g0106571 | 70.588 | 85 | 25 | 0 | 397 | 481 | 2 | 86 | 2.84e-42 | 145 |
| Msa1110010 | MtrunA17_Chr4g0038831 | 27.338 | 417 | 271 | 12 | 82 | 471 | 80 | 491 | 7.47e-38 | 145 |
| Msa1110010 | MtrunA17_Chr3g0145711 | 28.620 | 297 | 195 | 8 | 83 | 374 | 76 | 360 | 9.04e-22 | 97.8 |
| Msa1110010 | MtrunA17_Chr3g0125931 | 55.405 | 74 | 15 | 2 | 327 | 400 | 9 | 64 | 1.73e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110010 | AT3G08860.1 | 74.160 | 476 | 115 | 2 | 10 | 481 | 10 | 481 | 0.0 | 756 |
| Msa1110010 | AT3G08860.2 | 74.675 | 462 | 109 | 2 | 10 | 467 | 10 | 467 | 0.0 | 735 |
| Msa1110010 | AT2G38400.1 | 72.176 | 478 | 130 | 2 | 6 | 481 | 1 | 477 | 0.0 | 730 |
| Msa1110010 | AT2G38400.2 | 71.218 | 476 | 134 | 2 | 6 | 479 | 1 | 475 | 0.0 | 711 |
| Msa1110010 | AT4G39660.1 | 62.474 | 477 | 175 | 2 | 6 | 481 | 3 | 476 | 0.0 | 644 |
| Msa1110010 | AT4G39660.2 | 66.834 | 398 | 132 | 0 | 84 | 481 | 4 | 401 | 0.0 | 582 |
| Msa1110010 | AT1G80600.1 | 31.401 | 414 | 243 | 10 | 79 | 481 | 73 | 456 | 5.12e-54 | 188 |
| Msa1110010 | AT5G46180.1 | 29.383 | 405 | 249 | 13 | 75 | 466 | 51 | 431 | 1.26e-41 | 155 |
| Msa1110010 | AT3G22200.2 | 25.721 | 416 | 278 | 10 | 83 | 471 | 79 | 490 | 1.26e-36 | 142 |
| Msa1110010 | AT3G22200.1 | 25.721 | 416 | 278 | 10 | 83 | 471 | 70 | 481 | 1.59e-36 | 141 |
| Msa1110010 | AT3G48730.1 | 27.517 | 298 | 197 | 8 | 83 | 374 | 80 | 364 | 1.28e-20 | 94.7 |
| Msa1110010 | AT5G63570.2 | 27.362 | 307 | 196 | 8 | 83 | 379 | 19 | 308 | 2.68e-20 | 93.2 |
| Msa1110010 | AT5G63570.1 | 27.362 | 307 | 196 | 8 | 83 | 379 | 82 | 371 | 7.58e-20 | 92.4 |
Find 144 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGCACTGGTAGCCATTTC+TGG | 0.009852 | 7_3:-54542547 | Msa1110010:CDS |
| TTACATTTGCATCTTATTTA+AGG | 0.125821 | 7_3:+54541075 | None:intergenic |
| CAGTATCTGTTCGATGAAAA+TGG | 0.225955 | 7_3:-54546597 | Msa1110010:CDS |
| CCTCCAACACTTTCGGATTC+GGG | 0.235947 | 7_3:-54547136 | Msa1110010:five_prime_UTR |
| TCCTCCAACACTTTCGGATT+CGG | 0.244947 | 7_3:-54547137 | Msa1110010:five_prime_UTR |
| ATCATTAACTTTGGAACTTC+CGG | 0.255701 | 7_3:-54543179 | Msa1110010:CDS |
| TATGAATGCAGCAACATTTC+CGG | 0.284865 | 7_3:+54543160 | None:intergenic |
| TCTTCTTTGCTGAAACATAA+AGG | 0.285819 | 7_3:+54541257 | None:intergenic |
| ATTGGAAAAGGTGGCTACTA+TGG | 0.329020 | 7_3:-54541302 | Msa1110010:CDS |
| TATGTTCCGCCGTCGTATTC+CGG | 0.337270 | 7_3:-54546911 | Msa1110010:CDS |
| AATGAGAGAGAATCGGGATT+TGG | 0.341530 | 7_3:+54547173 | None:intergenic |
| CTATTCTCCTCCAACACTTT+CGG | 0.346762 | 7_3:-54547143 | Msa1110010:five_prime_UTR |
| TCGCACTGGTAGCCATTTCT+GGG | 0.349458 | 7_3:-54542546 | Msa1110010:CDS |
| TTCAGCGGCGACGGTTTCTT+TGG | 0.350030 | 7_3:+54546958 | None:intergenic |
| AGCAGTTACTTTAACACCTT+TGG | 0.355456 | 7_3:-54541988 | Msa1110010:CDS |
| CAAGAAAATGCGTTTGTAGT+TGG | 0.356948 | 7_3:-54541901 | Msa1110010:CDS |
| GGGCCACAGCTCAAAGTATC+TGG | 0.359873 | 7_3:-54544157 | Msa1110010:CDS |
| CTTCTTTGCTGAAACATAAA+GGG | 0.364991 | 7_3:+54541258 | None:intergenic |
| CTCTTGGTGACGGAGGATTC+CGG | 0.367751 | 7_3:+54547086 | None:intergenic |
| ATGAGACTTTACCTTTCATT+TGG | 0.370313 | 7_3:+54541538 | None:intergenic |
| TTTGCCATTGTTACTATGTC+AGG | 0.374851 | 7_3:+54542500 | None:intergenic |
| TTCCAAAGTTAATGATCTCT+TGG | 0.382606 | 7_3:+54543186 | None:intergenic |
| AGAGAATCGGGATTTGGAAT+TGG | 0.384744 | 7_3:+54547179 | None:intergenic |
| GACGGTTTCTTTGGTTCTTT+CGG | 0.387530 | 7_3:+54546967 | None:intergenic |
| AAGAAAATGCGTTTGTAGTT+GGG | 0.389449 | 7_3:-54541900 | Msa1110010:CDS |
| ACAATCGCTGCAACCACATC+AGG | 0.395011 | 7_3:+54546516 | None:intergenic |
| TGAAGAAATGAGAGAGAATC+GGG | 0.398255 | 7_3:+54547167 | None:intergenic |
| TGCATCTTATTTAAGGCATT+AGG | 0.401679 | 7_3:+54541082 | None:intergenic |
| GGCTCTGCGGCGGTGGTGAT+CGG | 0.404582 | 7_3:+54547026 | None:intergenic |
| AGTTGGTGGCATTGTTGAAT+TGG | 0.406436 | 7_3:-54542654 | Msa1110010:CDS |
| GCTTTGGCTGGTAAACTTCC+CGG | 0.406693 | 7_3:-54546423 | Msa1110010:CDS |
| GGGAATGCAGGTGGGACGAT+GGG | 0.409110 | 7_3:-54544179 | Msa1110010:CDS |
| CCGTCGTATTCCGGTCCTTC+CGG | 0.409746 | 7_3:-54546902 | Msa1110010:CDS |
| ATGAAGAAATGAGAGAGAAT+CGG | 0.411810 | 7_3:+54547166 | None:intergenic |
| AGAAGATACGTTGATGCGTT+CGG | 0.412600 | 7_3:-54546573 | Msa1110010:CDS |
| TAAACTTCCCGGTGATCTTA+AGG | 0.419462 | 7_3:-54546412 | Msa1110010:intron |
| GGAATGCAGGTGGGACGATG+GGG | 0.421423 | 7_3:-54544178 | Msa1110010:CDS |
| GTCAAGACCTTTGCAATCTC+AGG | 0.423270 | 7_3:+54542015 | None:intergenic |
| GCTACCAGTGCGAGCAAATC+CGG | 0.428696 | 7_3:+54542556 | None:intergenic |
| AGTGATCCTGTCATTTCTCT+TGG | 0.428965 | 7_3:+54547070 | None:intergenic |
| ATTGGTGATGTGAGAGGAAA+AGG | 0.430021 | 7_3:-54541639 | Msa1110010:CDS |
| ATTCATATCAGAAGCTATAC+AGG | 0.430695 | 7_3:-54543144 | Msa1110010:intron |
| AACTCTTACCATGGGAATGC+AGG | 0.442564 | 7_3:-54544191 | Msa1110010:CDS |
| GCGGCGGTGGTGATCGGCGG+AGG | 0.443340 | 7_3:+54547032 | None:intergenic |
| GACGTCGTCGCCGGAAGGAC+CGG | 0.445069 | 7_3:+54546892 | None:intergenic |
| GCGGTGGTGATCGGCGGAGG+AGG | 0.446139 | 7_3:+54547035 | None:intergenic |
| TTCTGGGGCTTTGAATCCCA+TGG | 0.453166 | 7_3:-54542530 | Msa1110010:CDS |
| GTGACGGAGGATTCCGGTGA+TGG | 0.453418 | 7_3:+54547092 | None:intergenic |
| AAAAGACCTCTGTAAGGGTC+TGG | 0.455332 | 7_3:+54543242 | None:intergenic |
| GTCCAAGAGATCATTAACTT+TGG | 0.458763 | 7_3:-54543188 | Msa1110010:CDS |
| AAGAGTTGGCTCTGCGGCGG+TGG | 0.462291 | 7_3:+54547019 | None:intergenic |
| AGGAACAGAAGCAAACGAAT+TGG | 0.465698 | 7_3:-54544267 | Msa1110010:CDS |
| ACCAAGAGACAACGAGTTGT+TGG | 0.465851 | 7_3:+54540932 | None:intergenic |
| CTGGAAATTTAATGTTGTGC+AGG | 0.471338 | 7_3:-54544138 | Msa1110010:intron |
| AATCCTGCAGCTGTACAAAC+AGG | 0.472168 | 7_3:+54541958 | None:intergenic |
| AATCCTGTTTGTACAGCTGC+AGG | 0.473654 | 7_3:-54541961 | Msa1110010:CDS |
| GCCAACAACTCGTTGTCTCT+TGG | 0.476907 | 7_3:-54540933 | Msa1110010:three_prime_UTR |
| TTCTTTGGTTCTTTCGGCTG+CGG | 0.477394 | 7_3:+54546973 | None:intergenic |
| AGTATCTGTTCGATGAAAAT+GGG | 0.477470 | 7_3:-54546596 | Msa1110010:CDS |
| ATTGGAAATGGCATTCCTCT+TGG | 0.478291 | 7_3:-54542054 | Msa1110010:CDS |
| CACCGGTGGTTCAGCGGCGA+CGG | 0.480029 | 7_3:+54546949 | None:intergenic |
| GGGATTCAAAGCCCCAGAAA+TGG | 0.480114 | 7_3:+54542534 | None:intergenic |
| GAATCGGGATTTGGAATTGG+AGG | 0.482922 | 7_3:+54547182 | None:intergenic |
| TGTTTATGGTAGGGAGTTGG+TGG | 0.484164 | 7_3:-54542668 | Msa1110010:intron |
| AGTTACTTTAACACCTTTGG+TGG | 0.496452 | 7_3:-54541985 | Msa1110010:CDS |
| TGTTTGTACAGCTGCAGGAT+TGG | 0.496760 | 7_3:-54541956 | Msa1110010:CDS |
| TGTTGTTTATGGTAGGGAGT+TGG | 0.497163 | 7_3:-54542671 | Msa1110010:intron |
| AACCGTCGCCGCTGAACCAC+CGG | 0.498922 | 7_3:-54546951 | Msa1110010:CDS |
| CTTCGCGAGGACGTCGTCGC+CGG | 0.500063 | 7_3:+54546883 | None:intergenic |
| CCCGAATCCGAAAGTGTTGG+AGG | 0.500520 | 7_3:+54547136 | None:intergenic |
| GAATGCAGGTGGGACGATGG+GGG | 0.504998 | 7_3:-54544177 | Msa1110010:CDS |
| TTAGGAGTGCTGATTGGAAA+AGG | 0.508057 | 7_3:-54541314 | Msa1110010:CDS |
| TCTATTAGAAACTCTTACCA+TGG | 0.509042 | 7_3:-54544200 | Msa1110010:CDS |
| TTAACACTGTCATAGGCAGC+AGG | 0.510051 | 7_3:+54542617 | None:intergenic |
| TGTTTCAGCAAAGAAGATGC+AGG | 0.516500 | 7_3:-54541251 | Msa1110010:intron |
| TACATTTCTCGAACCATCAC+CGG | 0.516790 | 7_3:-54547105 | Msa1110010:five_prime_UTR |
| GGCATTGTTGAATTGGCACC+TGG | 0.521559 | 7_3:-54542647 | Msa1110010:CDS |
| TGGGAATGCAGGTGGGACGA+TGG | 0.521993 | 7_3:-54544180 | Msa1110010:CDS |
| CCTGTCATTTCTCTTGGTGA+CGG | 0.523610 | 7_3:+54547076 | None:intergenic |
| AGGTCTTTGTATTGCTGATG+AGG | 0.533031 | 7_3:-54542585 | Msa1110010:CDS |
| ACAGAATTAGGAGTGCTGAT+TGG | 0.533448 | 7_3:-54541320 | Msa1110010:intron |
| ATTGCTGATGAGGTTCAGTC+CGG | 0.534683 | 7_3:-54542575 | Msa1110010:CDS |
| GTGTAGCTGAACATCGTTGA+GGG | 0.537915 | 7_3:-54546627 | Msa1110010:intron |
| GATACGTTGATGCGTTCGGA+GGG | 0.546720 | 7_3:-54546569 | Msa1110010:CDS |
| CAGTCCGGATTTGCTCGCAC+TGG | 0.546849 | 7_3:-54542560 | Msa1110010:CDS |
| AATCGGGATTTGGAATTGGA+GGG | 0.550977 | 7_3:+54547183 | None:intergenic |
| GTCATTTCTCTTGGTGACGG+AGG | 0.551472 | 7_3:+54547079 | None:intergenic |
| AAAGCTTACCTTAAGATCAC+CGG | 0.557426 | 7_3:+54546404 | None:intergenic |
| TATGTCAGGTTGAACACCAT+GGG | 0.559962 | 7_3:+54542514 | None:intergenic |
| GGTGATGGTTCGAGAAATGT+AGG | 0.560617 | 7_3:+54547107 | None:intergenic |
| ACGACGTCCTCGCGAAGCGT+AGG | 0.562971 | 7_3:-54546877 | Msa1110010:CDS |
| TAATCGAACGGTGGAAGCAC+CGG | 0.566150 | 7_3:+54546932 | None:intergenic |
| CATGCATTTCTACAAATCTC+CGG | 0.569715 | 7_3:-54546834 | Msa1110010:intron |
| TCTGCGGCGGTGGTGATCGG+CGG | 0.573656 | 7_3:+54547029 | None:intergenic |
| TCTAGATAATGTGTAGTCCA+TGG | 0.575144 | 7_3:+54541118 | None:intergenic |
| TTTCCAGATACTTTGAGCTG+TGG | 0.575509 | 7_3:+54544154 | None:intergenic |
| AGAGGAAAAGGATTGATGCT+TGG | 0.577672 | 7_3:-54541627 | Msa1110010:CDS |
| TCGAACGGTGGAAGCACCGG+TGG | 0.580877 | 7_3:+54546935 | None:intergenic |
| TAGGCAGCAGGCAAGTAACC+AGG | 0.586371 | 7_3:+54542629 | None:intergenic |
| AGATACGTTGATGCGTTCGG+AGG | 0.586568 | 7_3:-54546570 | Msa1110010:CDS |
| TGGAAGCACCGGTGGTTCAG+CGG | 0.592500 | 7_3:+54546943 | None:intergenic |
| TCTTACCATGGGAATGCAGG+TGG | 0.593784 | 7_3:-54544188 | Msa1110010:CDS |
| TGCCTCGTTGCAGAAAGAGT+TGG | 0.596331 | 7_3:+54547005 | None:intergenic |
| GCGAGGACGTCGTCGCCGGA+AGG | 0.596921 | 7_3:+54546887 | None:intergenic |
| CTATTAGAAACTCTTACCAT+GGG | 0.598419 | 7_3:-54544199 | Msa1110010:CDS |
| TTCTTTGCTGAAACATAAAG+GGG | 0.598920 | 7_3:+54541259 | None:intergenic |
| TCGTCCCACCTGCATTCCCA+TGG | 0.605065 | 7_3:+54544183 | None:intergenic |
| AGTTGAAACACTGCATGTGA+TGG | 0.608199 | 7_3:-54541562 | Msa1110010:CDS |
| GGGATTGCTACGGTGTGTTG+CGG | 0.610241 | 7_3:-54546549 | Msa1110010:CDS |
| ATAGTAATTGGTGATGTGAG+AGG | 0.611784 | 7_3:-54541645 | Msa1110010:intron |
| CAACACTTTCGGATTCGGGT+CGG | 0.613804 | 7_3:-54547132 | Msa1110010:five_prime_UTR |
| AGAAAGAGTTGGCTCTGCGG+CGG | 0.616555 | 7_3:+54547016 | None:intergenic |
| TTGGGTCTCATCTGAAAGAG+AGG | 0.618508 | 7_3:-54541882 | Msa1110010:CDS |
| CCGTCACCAAGAGAAATGAC+AGG | 0.619433 | 7_3:-54547076 | Msa1110010:exon |
| TGACATAGTAACAATGGCAA+AGG | 0.621822 | 7_3:-54542498 | Msa1110010:intron |
| AAGCTTACCTTAAGATCACC+GGG | 0.630555 | 7_3:+54546405 | None:intergenic |
| CGGACACTGTCACCCTGATG+TGG | 0.632047 | 7_3:-54546529 | Msa1110010:CDS |
| CGCACTGGTAGCCATTTCTG+GGG | 0.634932 | 7_3:-54542545 | Msa1110010:CDS |
| AATTGGCAATGATGATAGCA+AGG | 0.637816 | 7_3:-54544250 | Msa1110010:CDS |
| GATATTCCCTACGCTTCGCG+AGG | 0.638805 | 7_3:+54546870 | None:intergenic |
| TTGTAGAAATGCATGATCGA+CGG | 0.640875 | 7_3:+54546842 | None:intergenic |
| TTCTAATAGAGATTATGTCA+TGG | 0.641756 | 7_3:+54544213 | None:intergenic |
| TCAACCTGACATAGTAACAA+TGG | 0.643307 | 7_3:-54542504 | Msa1110010:CDS |
| CAATCGCTGCAACCACATCA+GGG | 0.644233 | 7_3:+54546517 | None:intergenic |
| AACTACTCCTGAGATTGCAA+AGG | 0.644733 | 7_3:-54542022 | Msa1110010:CDS |
| GGAGTGCTGATTGGAAAAGG+TGG | 0.644946 | 7_3:-54541311 | Msa1110010:CDS |
| CATGTGATGGACCAAATGAA+AGG | 0.659073 | 7_3:-54541549 | Msa1110010:intron |
| CTATGTCAGGTTGAACACCA+TGG | 0.659430 | 7_3:+54542513 | None:intergenic |
| TGCAGAAAGAGTTGGCTCTG+CGG | 0.659948 | 7_3:+54547013 | None:intergenic |
| GGCGGAGGAGGAATCTTGCG+AGG | 0.661912 | 7_3:+54547047 | None:intergenic |
| ATGATAGCAAGGTTGTACAC+TGG | 0.662368 | 7_3:-54544239 | Msa1110010:CDS |
| TGCGTTCGGAGGGATTGCTA+CGG | 0.666353 | 7_3:-54546559 | Msa1110010:CDS |
| AGCCAACTCTTTCTGCAACG+AGG | 0.668766 | 7_3:-54547007 | Msa1110010:CDS |
| GACGGCGGAACATAATCGAA+CGG | 0.676190 | 7_3:+54546920 | None:intergenic |
| CTTACCATGGGAATGCAGGT+GGG | 0.677910 | 7_3:-54544187 | Msa1110010:CDS |
| CCGGAAGGACCGGAATACGA+CGG | 0.688141 | 7_3:+54546902 | None:intergenic |
| GTAGTTACAACAGCACCAAG+AGG | 0.688261 | 7_3:+54542039 | None:intergenic |
| GTAGTTGCAAACTGCCATTG+TGG | 0.700808 | 7_3:-54540966 | Msa1110010:three_prime_UTR |
| GAAGGACCGGAATACGACGG+CGG | 0.708767 | 7_3:+54546905 | None:intergenic |
| GTAAATCCAGACCCTTACAG+AGG | 0.712208 | 7_3:-54543248 | Msa1110010:CDS |
| ACAAACAGGATTTCCACCAA+AGG | 0.714252 | 7_3:+54541972 | None:intergenic |
| TCTTTGCTGAAACATAAAGG+GGG | 0.716779 | 7_3:+54541260 | None:intergenic |
| GGCGGAACATAATCGAACGG+TGG | 0.727637 | 7_3:+54546923 | None:intergenic |
| GGTGTAGCTGAACATCGTTG+AGG | 0.766055 | 7_3:-54546628 | Msa1110010:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTAAAATATTAAAA+TGG | + | chr7_3:54541861-54541880 | None:intergenic | 0.0% |
| !!! | ATTTTAATATTTTAAAATTT+AGG | - | chr7_3:54541860-54541879 | Msa1110010:CDS | 0.0% |
| !!! | ATTTAATGGTAATTTTTTTA+TGG | - | chr7_3:54541767-54541786 | Msa1110010:intron | 10.0% |
| !!! | AAATTTTGGTAAAAAAATAT+TGG | - | chr7_3:54541968-54541987 | Msa1110010:CDS | 10.0% |
| !!! | TTAATATTTCATTGATTAAA+TGG | - | chr7_3:54542137-54542156 | Msa1110010:intron | 10.0% |
| !!! | TATTTATCTTCTTTTTTTTT+AGG | + | chr7_3:54542712-54542731 | None:intergenic | 10.0% |
| !! | AAGAAGATAAATAAAATATA+TGG | - | chr7_3:54542719-54542738 | Msa1110010:intron | 10.0% |
| !! | TATTAACAGATAAATAAAAA+AGG | + | chr7_3:54544005-54544024 | None:intergenic | 10.0% |
| !!! | TCTTTTATTTAAAAATATCA+GGG | + | chr7_3:54544186-54544205 | None:intergenic | 10.0% |
| !!! | ATCTTTTATTTAAAAATATC+AGG | + | chr7_3:54544187-54544206 | None:intergenic | 10.0% |
| !!! | TCAAAATTCTTTATATTTTT+TGG | - | chr7_3:54545190-54545209 | Msa1110010:intron | 10.0% |
| !!! | TACTGTTTAGTTTAATTTAA+TGG | - | chr7_3:54541753-54541772 | Msa1110010:intron | 15.0% |
| !!! | AATATCTGATATTGAAATTT+TGG | - | chr7_3:54541954-54541973 | Msa1110010:CDS | 15.0% |
| !! | TGATTATTATGTTTATGTAT+TGG | - | chr7_3:54542415-54542434 | Msa1110010:intron | 15.0% |
| !! | TTATAAAAATATGGAGTAAT+AGG | + | chr7_3:54542644-54542663 | None:intergenic | 15.0% |
| !! | ATGCATCAATTATAAAAATA+TGG | + | chr7_3:54542653-54542672 | None:intergenic | 15.0% |
| !!! | ACTAACTTTTTTTTTAAGAA+CGG | - | chr7_3:54542787-54542806 | Msa1110010:intron | 15.0% |
| !!! | TTTTATTACTCAAATGTTTT+TGG | + | chr7_3:54543307-54543326 | None:intergenic | 15.0% |
| !!! | AGTATTTTTTTTTTTGGTTA+AGG | - | chr7_3:54544626-54544645 | Msa1110010:intron | 15.0% |
| !! | AAAGTAGTTAGTTAATTATC+CGG | + | chr7_3:54541312-54541331 | None:intergenic | 20.0% |
| !!! | TATGGAATTTGATTTGATAT+AGG | - | chr7_3:54541785-54541804 | Msa1110010:intron | 20.0% |
| !! | TCAAACAAAAACATTTAAAG+AGG | - | chr7_3:54542265-54542284 | Msa1110010:intron | 20.0% |
| !!! | CAAATTTTGACAGAATTATT+CGG | + | chr7_3:54542451-54542470 | None:intergenic | 20.0% |
| !! | CAAATTATTTACCAATCTAA+GGG | + | chr7_3:54542488-54542507 | None:intergenic | 20.0% |
| !! | CTTAGATTGGTAAATAATTT+GGG | - | chr7_3:54542487-54542506 | Msa1110010:intron | 20.0% |
| !! | AAATATACGATAAGAAACTT+TGG | + | chr7_3:54542543-54542562 | None:intergenic | 20.0% |
| !! | GGTATTATAAGTTAATTCTA+GGG | + | chr7_3:54542988-54543007 | None:intergenic | 20.0% |
| !! | AGGTATTATAAGTTAATTCT+AGG | + | chr7_3:54542989-54543008 | None:intergenic | 20.0% |
| !! | ACTTTAACTAGGTATTATAA+AGG | + | chr7_3:54543009-54543028 | None:intergenic | 20.0% |
| !! | ACTATAATTGAACTTTAACT+AGG | + | chr7_3:54543020-54543039 | None:intergenic | 20.0% |
| !! | CAATTAAGAATATTAGTGAT+TGG | + | chr7_3:54543066-54543085 | None:intergenic | 20.0% |
| !! | ATATCACTCATCAAATAAAT+TGG | - | chr7_3:54543481-54543500 | Msa1110010:intron | 20.0% |
| !! | TAACAGATAAATAAAAAAGG+AGG | + | chr7_3:54544002-54544021 | None:intergenic | 20.0% |
| !! | CAGTTAACAAAAATATAAGA+AGG | - | chr7_3:54544457-54544476 | Msa1110010:intron | 20.0% |
| !! | TAACAAAAATATAAGAAGGT+TGG | - | chr7_3:54544461-54544480 | Msa1110010:intron | 20.0% |
| !! | AACAAAAATATAAGAAGGTT+GGG | - | chr7_3:54544462-54544481 | Msa1110010:intron | 20.0% |
| !! | AATTGTAGTATTATTTGCTT+AGG | + | chr7_3:54544545-54544564 | None:intergenic | 20.0% |
| !! | AGTATAAGATATATGTATCT+TGG | - | chr7_3:54544594-54544613 | Msa1110010:intron | 20.0% |
| !! | ACAACTCAGTTAAAATAATT+GGG | + | chr7_3:54544755-54544774 | None:intergenic | 20.0% |
| !! | TACAACTCAGTTAAAATAAT+TGG | + | chr7_3:54544756-54544775 | None:intergenic | 20.0% |
| !!! | TTGCTAACAGTTTATTTTTT+TGG | - | chr7_3:54544806-54544825 | Msa1110010:intron | 20.0% |
| !!! | TGCTAACAGTTTATTTTTTT+GGG | - | chr7_3:54544807-54544826 | Msa1110010:intron | 20.0% |
| !!! | ATGTTTTTCACCTATATATA+AGG | + | chr7_3:54544989-54545008 | None:intergenic | 20.0% |
| !!! | AGTGATAAGTTTAATTTAAG+TGG | + | chr7_3:54545274-54545293 | None:intergenic | 20.0% |
| !!! | ATAATTGATAATTTTAGCCA+AGG | - | chr7_3:54545777-54545796 | Msa1110010:intron | 20.0% |
| !!! | CTTCTCTATTACTTTTAAAA+CGG | + | chr7_3:54546175-54546194 | None:intergenic | 20.0% |
| !!! | ACATATCTAATCAAACTTTT+TGG | - | chr7_3:54546428-54546447 | Msa1110010:CDS | 20.0% |
| !!! | ACATTTTTAAACCTGATTTA+TGG | - | chr7_3:54546677-54546696 | Msa1110010:intron | 20.0% |
| !!! | TTACATTTGCATCTTATTTA+AGG | + | chr7_3:54547033-54547052 | None:intergenic | 20.0% |
| ! | CAGTAACAAAATTGAGATTA+CGG | + | chr7_3:54541738-54541757 | None:intergenic | 25.0% |
| !!! | AAGAAGTCATTGATTTTTTG+TGG | + | chr7_3:54541901-54541920 | None:intergenic | 25.0% |
| ! | GAGTAATTACTTACTATTTG+TGG | - | chr7_3:54542086-54542105 | Msa1110010:intron | 25.0% |
| ! | TCATTATCATGTTTCCTTTA+AGG | - | chr7_3:54542111-54542130 | Msa1110010:intron | 25.0% |
| ! | TGAAATATTAAGAGCCTTAA+AGG | + | chr7_3:54542128-54542147 | None:intergenic | 25.0% |
| ! | TTGATTAAATGGATCTTCAA+TGG | - | chr7_3:54542148-54542167 | Msa1110010:intron | 25.0% |
| ! | GACTAGATATTTATTTGACT+TGG | + | chr7_3:54542175-54542194 | None:intergenic | 25.0% |
| ! | CGAATAATTCTGTCAAAATT+TGG | - | chr7_3:54542449-54542468 | Msa1110010:intron | 25.0% |
| ! | TAATTCTGTCAAAATTTGGT+AGG | - | chr7_3:54542453-54542472 | Msa1110010:intron | 25.0% |
| ! | CCAAATTATTTACCAATCTA+AGG | + | chr7_3:54542489-54542508 | None:intergenic | 25.0% |
| ! | CCTTAGATTGGTAAATAATT+TGG | - | chr7_3:54542486-54542505 | Msa1110010:intron | 25.0% |
| !! | CATTTAAGATTTAAAGCATG+TGG | + | chr7_3:54542579-54542598 | None:intergenic | 25.0% |
| !! | CACATGCTTTAAATCTTAAA+TGG | - | chr7_3:54542577-54542596 | Msa1110010:CDS | 25.0% |
| ! | ATCATATACAATGTACTCAA+TGG | - | chr7_3:54542896-54542915 | Msa1110010:intron | 25.0% |
| ! | ATCTCATGATATTGACATAT+TGG | + | chr7_3:54543089-54543108 | None:intergenic | 25.0% |
| ! | ATATGTCAATATCATGAGAT+TGG | - | chr7_3:54543089-54543108 | Msa1110010:intron | 25.0% |
| ! | TATGTCAATATCATGAGATT+GGG | - | chr7_3:54543090-54543109 | Msa1110010:intron | 25.0% |
| !! | GTTTTCTCTAGTGAATTATT+AGG | + | chr7_3:54543213-54543232 | None:intergenic | 25.0% |
| ! | ATTAATTCAAGAGTAACTTG+CGG | - | chr7_3:54543565-54543584 | Msa1110010:intron | 25.0% |
| !! | CGTTTATTGTGAATTTTAAG+TGG | - | chr7_3:54543763-54543782 | Msa1110010:intron | 25.0% |
| ! | TTCTAATAGAGATTATGTCA+TGG | + | chr7_3:54543895-54543914 | None:intergenic | 25.0% |
| ! | TACTGTGAGATCAAATTAAA+TGG | + | chr7_3:54544028-54544047 | None:intergenic | 25.0% |
| ! | TTATGTAACATTGAACGAAA+TGG | - | chr7_3:54544282-54544301 | Msa1110010:CDS | 25.0% |
| ! | CAACTCAGTTAAAATAATTG+GGG | + | chr7_3:54544754-54544773 | None:intergenic | 25.0% |
| !!! | TAACAGTTTATTTTTTTGGG+TGG | - | chr7_3:54544810-54544829 | Msa1110010:intron | 25.0% |
| ! | TATACAGGTACCTTATATAT+AGG | - | chr7_3:54544976-54544995 | Msa1110010:intron | 25.0% |
| ! | AAACCATGATCTAATGAATA+AGG | + | chr7_3:54545075-54545094 | None:intergenic | 25.0% |
| !!! | ATTAGATCATGGTTTTAAAC+TGG | - | chr7_3:54545080-54545099 | Msa1110010:intron | 25.0% |
| !!! | TTAGATCATGGTTTTAAACT+GGG | - | chr7_3:54545081-54545100 | Msa1110010:intron | 25.0% |
| !!! | TAATGCATGGTTTTAAATTG+CGG | + | chr7_3:54545239-54545258 | None:intergenic | 25.0% |
| ! | ATCATATAACCAATTCACTT+TGG | + | chr7_3:54545369-54545388 | None:intergenic | 25.0% |
| ! | TTTGCTAAATTAAGTGAAGA+TGG | + | chr7_3:54545673-54545692 | None:intergenic | 25.0% |
| ! | AACAATAATGAGCATACATA+AGG | + | chr7_3:54545992-54546011 | None:intergenic | 25.0% |
| ! | TTATGTATGCTCATTATTGT+TGG | - | chr7_3:54545991-54546010 | Msa1110010:intron | 25.0% |
| !!! | CGTTTTAAAAGTAATAGAGA+AGG | - | chr7_3:54546173-54546192 | Msa1110010:intron | 25.0% |
| ! | CAAAGACAAATATGAATGTA+AGG | - | chr7_3:54546257-54546276 | Msa1110010:intron | 25.0% |
| !! | TTCTAGAGAGATTTATATGA+TGG | - | chr7_3:54546339-54546358 | Msa1110010:intron | 25.0% |
| !! | GATTTATATGATGGAAACAA+AGG | - | chr7_3:54546348-54546367 | Msa1110010:intron | 25.0% |
| ! | ACTATAGTTGAGATCATTAT+GGG | - | chr7_3:54546371-54546390 | Msa1110010:intron | 25.0% |
| ! | TCTAATGTTACTACAGAATT+AGG | - | chr7_3:54546773-54546792 | Msa1110010:intron | 25.0% |
| ATGAAGAAATGAGAGAGAAT+CGG | + | chr7_3:54540942-54540961 | None:intergenic | 30.0% | |
| AGTATCTGTTCGATGAAAAT+GGG | - | chr7_3:54541509-54541528 | Msa1110010:intron | 30.0% | |
| TATTAAAATGGTAAGCTGAG+AGG | + | chr7_3:54541849-54541868 | None:intergenic | 30.0% | |
| !!! | CATTGATTTTTTGTGGTGTT+TGG | + | chr7_3:54541894-54541913 | None:intergenic | 30.0% |
| CAGCAAAAAGAAAAAACAGA+CGG | - | chr7_3:54542356-54542375 | Msa1110010:intron | 30.0% | |
| ! | AAAGAAAAAACAGACGGATT+TGG | - | chr7_3:54542362-54542381 | Msa1110010:intron | 30.0% |
| ! | TAAGATTTAAAGCATGTGGT+TGG | + | chr7_3:54542575-54542594 | None:intergenic | 30.0% |
| ! | AGTTAGTCATACATTTTCTG+TGG | + | chr7_3:54542774-54542793 | None:intergenic | 30.0% |
| CTAGGGTAAAAGTGAAATAA+GGG | + | chr7_3:54542971-54542990 | None:intergenic | 30.0% | |
| ! | TCTAGGGTAAAAGTGAAATA+AGG | + | chr7_3:54542972-54542991 | None:intergenic | 30.0% |
| ATGTCAATATCATGAGATTG+GGG | - | chr7_3:54543091-54543110 | Msa1110010:intron | 30.0% | |
| ! | GGACAAGAAACATTATCTTT+TGG | + | chr7_3:54543168-54543187 | None:intergenic | 30.0% |
| TCTATTAGAAACTCTTACCA+TGG | - | chr7_3:54543905-54543924 | Msa1110010:intron | 30.0% | |
| CTATTAGAAACTCTTACCAT+GGG | - | chr7_3:54543906-54543925 | Msa1110010:intron | 30.0% | |
| GTTAACTGATAATAACAAGC+TGG | + | chr7_3:54544445-54544464 | None:intergenic | 30.0% | |
| TAGTATTATTTGCTTAGGAG+GGG | + | chr7_3:54544540-54544559 | None:intergenic | 30.0% | |
| GTAGTATTATTTGCTTAGGA+GGG | + | chr7_3:54544541-54544560 | None:intergenic | 30.0% | |
| TGTAGTATTATTTGCTTAGG+AGG | + | chr7_3:54544542-54544561 | None:intergenic | 30.0% | |
| !! | ATCATTAACTTTGGAACTTC+CGG | - | chr7_3:54544926-54544945 | Msa1110010:intron | 30.0% |
| ATTCATATCAGAAGCTATAC+AGG | - | chr7_3:54544961-54544980 | Msa1110010:intron | 30.0% | |
| CATCCTTATTCATTAGATCA+TGG | - | chr7_3:54545069-54545088 | Msa1110010:intron | 30.0% | |
| ! | ACTTCAAACTTTTAGATTGC+CGG | - | chr7_3:54545115-54545134 | Msa1110010:intron | 30.0% |
| AACCAATGCAATTGAAATCT+AGG | - | chr7_3:54545145-54545164 | Msa1110010:intron | 30.0% | |
| AACCTAGATTTCAATTGCAT+TGG | + | chr7_3:54545150-54545169 | None:intergenic | 30.0% | |
| ATCTAATGCATGTATCATGA+TGG | - | chr7_3:54545330-54545349 | Msa1110010:intron | 30.0% | |
| ATTTCCTATCCAAAGTGAAT+TGG | - | chr7_3:54545357-54545376 | Msa1110010:intron | 30.0% | |
| ATAACCAATTCACTTTGGAT+AGG | + | chr7_3:54545364-54545383 | None:intergenic | 30.0% | |
| !!! | AGCTTTTTTAACACTGTCAT+AGG | + | chr7_3:54545498-54545517 | None:intergenic | 30.0% |
| TATGACAGTGTTAAAAAAGC+TGG | - | chr7_3:54545497-54545516 | Msa1110010:intron | 30.0% | |
| GGCTAATATTCCATATTCAT+TGG | + | chr7_3:54545718-54545737 | None:intergenic | 30.0% | |
| !!! | GTCACATGTTTTTAAAACCT+TGG | + | chr7_3:54545797-54545816 | None:intergenic | 30.0% |
| CAATACCACAAATCAAATTG+TGG | + | chr7_3:54545819-54545838 | None:intergenic | 30.0% | |
| !!! | ATTTTGCTTTTGCTTTTTGC+AGG | - | chr7_3:54546026-54546045 | Msa1110010:intron | 30.0% |
| !!! | TTTTGCTTTTGCTTTTTGCA+GGG | - | chr7_3:54546027-54546046 | Msa1110010:intron | 30.0% |
| AAGAAAATGCGTTTGTAGTT+GGG | - | chr7_3:54546205-54546224 | Msa1110010:intron | 30.0% | |
| CTTGTGCATTAATCTTAGAT+GGG | + | chr7_3:54546301-54546320 | None:intergenic | 30.0% | |
| GACTATAGTTGAGATCATTA+TGG | - | chr7_3:54546370-54546389 | Msa1110010:intron | 30.0% | |
| TGGTTCTCTTCTATAGTAAT+TGG | - | chr7_3:54546448-54546467 | Msa1110010:CDS | 30.0% | |
| ATGAGACTTTACCTTTCATT+TGG | + | chr7_3:54546570-54546589 | None:intergenic | 30.0% | |
| TTAAGAATCCTACAGGATAT+CGG | + | chr7_3:54546621-54546640 | None:intergenic | 30.0% | |
| TAAACTGTTAAGAATCCTAC+AGG | + | chr7_3:54546628-54546647 | None:intergenic | 30.0% | |
| TTCTTAACAGTTTAGCATCT+CGG | - | chr7_3:54546634-54546653 | Msa1110010:intron | 30.0% | |
| GATTTCAATCTCCATAAATC+AGG | + | chr7_3:54546691-54546710 | None:intergenic | 30.0% | |
| TTCTGTAGTAACATTAGAAG+AGG | + | chr7_3:54546771-54546790 | None:intergenic | 30.0% | |
| TTCTTTGCTGAAACATAAAG+GGG | + | chr7_3:54546849-54546868 | None:intergenic | 30.0% | |
| CTTCTTTGCTGAAACATAAA+GGG | + | chr7_3:54546850-54546869 | None:intergenic | 30.0% | |
| TCTTCTTTGCTGAAACATAA+AGG | + | chr7_3:54546851-54546870 | None:intergenic | 30.0% | |
| ! | TGCATCTTATTTAAGGCATT+AGG | + | chr7_3:54547026-54547045 | None:intergenic | 30.0% |
| TGAAGAAATGAGAGAGAATC+GGG | + | chr7_3:54540941-54540960 | None:intergenic | 35.0% | |
| TTGTAGAAATGCATGATCGA+CGG | + | chr7_3:54541266-54541285 | None:intergenic | 35.0% | |
| CATGCATTTCTACAAATCTC+CGG | - | chr7_3:54541271-54541290 | Msa1110010:CDS | 35.0% | |
| AGTTAGTTAATTATCCGGTG+CGG | + | chr7_3:54541307-54541326 | None:intergenic | 35.0% | |
| TTATCGTCATCATCATCATC+TGG | + | chr7_3:54541407-54541426 | None:intergenic | 35.0% | |
| GATTATGATTGTGTGTGTGA+TGG | - | chr7_3:54541456-54541475 | Msa1110010:intron | 35.0% | |
| CAGTATCTGTTCGATGAAAA+TGG | - | chr7_3:54541508-54541527 | Msa1110010:intron | 35.0% | |
| AAAGCTTACCTTAAGATCAC+CGG | + | chr7_3:54541704-54541723 | None:intergenic | 35.0% | |
| !! | CGGATTTGGTGTTTCTTTAT+TGG | - | chr7_3:54542376-54542395 | Msa1110010:intron | 35.0% |
| AAAACAGCTTTCAACAAGTG+TGG | + | chr7_3:54542615-54542634 | None:intergenic | 35.0% | |
| GTGAAGAACAAAATTGTGCA+TGG | + | chr7_3:54542857-54542876 | None:intergenic | 35.0% | |
| TAGAAACAAGCTTAGCATGA+TGG | - | chr7_3:54542943-54542962 | Msa1110010:intron | 35.0% | |
| TGTCAATATCATGAGATTGG+GGG | - | chr7_3:54543092-54543111 | Msa1110010:intron | 35.0% | |
| GTCCATGTCAAGCAATTAAT+TGG | - | chr7_3:54543184-54543203 | Msa1110010:CDS | 35.0% | |
| GACCAATTAATTGCTTGACA+TGG | + | chr7_3:54543189-54543208 | None:intergenic | 35.0% | |
| GATTGAAGATGTGTTTGGTT+GGG | + | chr7_3:54543283-54543302 | None:intergenic | 35.0% | |
| TGATTGAAGATGTGTTTGGT+TGG | + | chr7_3:54543284-54543303 | None:intergenic | 35.0% | |
| ! | TTGGTGATTGAAGATGTGTT+TGG | + | chr7_3:54543288-54543307 | None:intergenic | 35.0% |
| AGTTGAGAAAATAGAGCACA+AGG | - | chr7_3:54543608-54543627 | Msa1110010:intron | 35.0% | |
| ! | ATTCGATCTACGTTTTGTCT+CGG | - | chr7_3:54543718-54543737 | Msa1110010:intron | 35.0% |
| AATTGGCAATGATGATAGCA+AGG | - | chr7_3:54543855-54543874 | Msa1110010:intron | 35.0% | |
| CTGGAAATTTAATGTTGTGC+AGG | - | chr7_3:54543967-54543986 | Msa1110010:intron | 35.0% | |
| ! | TTGAACGAAATGGACTTTAG+TGG | - | chr7_3:54544292-54544311 | Msa1110010:intron | 35.0% |
| CATTTACATGTGAACTCACA+TGG | + | chr7_3:54544704-54544723 | None:intergenic | 35.0% | |
| TATGAATGCAGCAACATTTC+CGG | + | chr7_3:54544948-54544967 | None:intergenic | 35.0% | |
| TCATTCACAAAGACTTGTGA+TGG | + | chr7_3:54545021-54545040 | None:intergenic | 35.0% | |
| !!! | ATTGCATTGGTTGCATTTTC+CGG | + | chr7_3:54545137-54545156 | None:intergenic | 35.0% |
| AACCATGCATTAGATAGTGA+TGG | - | chr7_3:54545247-54545266 | Msa1110010:intron | 35.0% | |
| !! | GATGATGCTCTTGTTGTTTA+TGG | - | chr7_3:54545423-54545442 | Msa1110010:intron | 35.0% |
| !! | ATGCTCTTGTTGTTTATGGT+AGG | - | chr7_3:54545427-54545446 | Msa1110010:intron | 35.0% |
| !! | TGCTCTTGTTGTTTATGGTA+GGG | - | chr7_3:54545428-54545447 | Msa1110010:intron | 35.0% |
| TCAACCTGACATAGTAACAA+TGG | - | chr7_3:54545601-54545620 | Msa1110010:intron | 35.0% | |
| TTTGCCATTGTTACTATGTC+AGG | + | chr7_3:54545608-54545627 | None:intergenic | 35.0% | |
| TGACATAGTAACAATGGCAA+AGG | - | chr7_3:54545607-54545626 | Msa1110010:intron | 35.0% | |
| ATCACTTTCAAGATCAGACA+AGG | + | chr7_3:54545739-54545758 | None:intergenic | 35.0% | |
| !! | TGTGACCACAATTTGATTTG+TGG | - | chr7_3:54545811-54545830 | Msa1110010:intron | 35.0% |
| TGTGTGGATAGATATATGCA+AGG | + | chr7_3:54545958-54545977 | None:intergenic | 35.0% | |
| TAAGGCATACATATTGTGTG+TGG | + | chr7_3:54545974-54545993 | None:intergenic | 35.0% | |
| !!! | TTTTGCTTTTTGCAGGGAAT+TGG | - | chr7_3:54546033-54546052 | Msa1110010:intron | 35.0% |
| ! | TTTTTGCAGGGAATTGGAAA+TGG | - | chr7_3:54546039-54546058 | Msa1110010:intron | 35.0% |
| ! | AGCAGTTACTTTAACACCTT+TGG | - | chr7_3:54546117-54546136 | Msa1110010:intron | 35.0% |
| ! | AGTTACTTTAACACCTTTGG+TGG | - | chr7_3:54546120-54546139 | Msa1110010:intron | 35.0% |
| CAAGAAAATGCGTTTGTAGT+TGG | - | chr7_3:54546204-54546223 | Msa1110010:intron | 35.0% | |
| TCTTAGATGGGAAAGGATAA+GGG | + | chr7_3:54546289-54546308 | None:intergenic | 35.0% | |
| ATCTTAGATGGGAAAGGATA+AGG | + | chr7_3:54546290-54546309 | None:intergenic | 35.0% | |
| GCATTAATCTTAGATGGGAA+AGG | + | chr7_3:54546296-54546315 | None:intergenic | 35.0% | |
| GCTTGTGCATTAATCTTAGA+TGG | + | chr7_3:54546302-54546321 | None:intergenic | 35.0% | |
| !! | ATAGTAATTGGTGATGTGAG+AGG | - | chr7_3:54546460-54546479 | Msa1110010:CDS | 35.0% |
| !!! | TTGCTGGTGTTTTTAGTTTG+CGG | + | chr7_3:54546522-54546541 | None:intergenic | 35.0% |
| TAAGAATCCTACAGGATATC+GGG | + | chr7_3:54546620-54546639 | None:intergenic | 35.0% | |
| TCTTTGCTGAAACATAAAGG+GGG | + | chr7_3:54546848-54546867 | None:intergenic | 35.0% | |
| ! | GATGTTTGCAGATTTTGTAG+TGG | - | chr7_3:54546961-54546980 | Msa1110010:CDS | 35.0% |
| TCTAGATAATGTGTAGTCCA+TGG | + | chr7_3:54546990-54547009 | None:intergenic | 35.0% | |
| ! | AGAGAATCGGGATTTGGAAT+TGG | + | chr7_3:54540929-54540948 | None:intergenic | 40.0% |
| AATGAGAGAGAATCGGGATT+TGG | + | chr7_3:54540935-54540954 | None:intergenic | 40.0% | |
| CTATTCTCCTCCAACACTTT+CGG | - | chr7_3:54540962-54540981 | Msa1110010:three_prime_UTR | 40.0% | |
| TACATTTCTCGAACCATCAC+CGG | - | chr7_3:54541000-54541019 | Msa1110010:three_prime_UTR | 40.0% | |
| ! | AGTGATCCTGTCATTTCTCT+TGG | + | chr7_3:54541038-54541057 | None:intergenic | 40.0% |
| !! | GACGGTTTCTTTGGTTCTTT+CGG | + | chr7_3:54541141-54541160 | None:intergenic | 40.0% |
| AGAAGATACGTTGATGCGTT+CGG | - | chr7_3:54541532-54541551 | Msa1110010:intron | 40.0% | |
| !!! | TGCTGATTTTGCAGAAGCTT+TGG | - | chr7_3:54541666-54541685 | Msa1110010:intron | 40.0% |
| TAAACTTCCCGGTGATCTTA+AGG | - | chr7_3:54541693-54541712 | Msa1110010:intron | 40.0% | |
| AAGCTTACCTTAAGATCACC+GGG | + | chr7_3:54541703-54541722 | None:intergenic | 40.0% | |
| CATTCCTATACTGAGGACAA+GGG | + | chr7_3:54542062-54542081 | None:intergenic | 40.0% | |
| AATATCATGAGATTGGGGGA+TGG | - | chr7_3:54543096-54543115 | Msa1110010:intron | 40.0% | |
| ! | TGTGTTTGGTTGGGTGTTTT+TGG | + | chr7_3:54543274-54543293 | None:intergenic | 40.0% |
| ACTCTTCTATCTCACACTCT+CGG | + | chr7_3:54543591-54543610 | None:intergenic | 40.0% | |
| !!! | GTGGCGTTTTTTACAAACTC+AGG | - | chr7_3:54543818-54543837 | Msa1110010:intron | 40.0% |
| AGGAACAGAAGCAAACGAAT+TGG | - | chr7_3:54543838-54543857 | Msa1110010:intron | 40.0% | |
| ATGATAGCAAGGTTGTACAC+TGG | - | chr7_3:54543866-54543885 | Msa1110010:intron | 40.0% | |
| TTTCCAGATACTTTGAGCTG+TGG | + | chr7_3:54543954-54543973 | None:intergenic | 40.0% | |
| AGCTGTGAAGATACATGTCA+AGG | + | chr7_3:54544121-54544140 | None:intergenic | 40.0% | |
| ! | CGAAATGGACTTTAGTGGAA+TGG | - | chr7_3:54544297-54544316 | Msa1110010:intron | 40.0% |
| GTGTGTGATAGCAACATCAA+CGG | - | chr7_3:54544371-54544390 | Msa1110010:intron | 40.0% | |
| ATAGCAACATCAACGGAGTT+TGG | - | chr7_3:54544378-54544397 | Msa1110010:intron | 40.0% | |
| ATGTGAACTCACATGGCAAT+TGG | + | chr7_3:54544697-54544716 | None:intergenic | 40.0% | |
| AGCCAAAAAGACCTCTGTAA+GGG | + | chr7_3:54544871-54544890 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTAAACTGGGCTTG+AGG | - | chr7_3:54545088-54545107 | Msa1110010:intron | 40.0% |
| GTCCATCACTATCTAATGCA+TGG | + | chr7_3:54545252-54545271 | None:intergenic | 40.0% | |
| ! | TGTTGTTTATGGTAGGGAGT+TGG | - | chr7_3:54545434-54545453 | Msa1110010:intron | 40.0% |
| !! | AGTTGGTGGCATTGTTGAAT+TGG | - | chr7_3:54545451-54545470 | Msa1110010:intron | 40.0% |
| GACAGTGTTAAAAAAGCTGG+AGG | - | chr7_3:54545500-54545519 | Msa1110010:intron | 40.0% | |
| AGGTCTTTGTATTGCTGATG+AGG | - | chr7_3:54545520-54545539 | Msa1110010:intron | 40.0% | |
| !! | TATGTCAGGTTGAACACCAT+GGG | + | chr7_3:54545594-54545613 | None:intergenic | 40.0% |
| GGATTCTTTCTACTCTGACA+AGG | + | chr7_3:54545652-54545671 | None:intergenic | 40.0% | |
| ATTCATTGGCGCAGACAATT+AGG | + | chr7_3:54545704-54545723 | None:intergenic | 40.0% | |
| ATTGTCTGCGCCAATGAATA+TGG | - | chr7_3:54545705-54545724 | Msa1110010:intron | 40.0% | |
| CAGCAATTCAAGCACAATTG+TGG | - | chr7_3:54545860-54545879 | Msa1110010:intron | 40.0% | |
| ATTGGAAATGGCATTCCTCT+TGG | - | chr7_3:54546051-54546070 | Msa1110010:intron | 40.0% | |
| AACTACTCCTGAGATTGCAA+AGG | - | chr7_3:54546083-54546102 | Msa1110010:intron | 40.0% | |
| ACAAACAGGATTTCCACCAA+AGG | + | chr7_3:54546136-54546155 | None:intergenic | 40.0% | |
| !! | ATTGGTGATGTGAGAGGAAA+AGG | - | chr7_3:54546466-54546485 | Msa1110010:CDS | 40.0% |
| AGAGGAAAAGGATTGATGCT+TGG | - | chr7_3:54546478-54546497 | Msa1110010:CDS | 40.0% | |
| ! | TGCAGTGTTTCAACTTTTGC+TGG | + | chr7_3:54546538-54546557 | None:intergenic | 40.0% |
| AGTTGAAACACTGCATGTGA+TGG | - | chr7_3:54546543-54546562 | Msa1110010:CDS | 40.0% | |
| !! | CATGTGATGGACCAAATGAA+AGG | - | chr7_3:54546556-54546575 | Msa1110010:CDS | 40.0% |
| ACAGTTTAGCATCTCGGATT+TGG | - | chr7_3:54546640-54546659 | Msa1110010:intron | 40.0% | |
| !! | ACAGAATTAGGAGTGCTGAT+TGG | - | chr7_3:54546785-54546804 | Msa1110010:intron | 40.0% |
| !! | TTAGGAGTGCTGATTGGAAA+AGG | - | chr7_3:54546791-54546810 | Msa1110010:intron | 40.0% |
| ATTGGAAAAGGTGGCTACTA+TGG | - | chr7_3:54546803-54546822 | Msa1110010:intron | 40.0% | |
| TGTTTCAGCAAAGAAGATGC+AGG | - | chr7_3:54546854-54546873 | Msa1110010:CDS | 40.0% | |
| !!! | AGATTTTGTAGTGGATGCCA+TGG | - | chr7_3:54546970-54546989 | Msa1110010:CDS | 40.0% |
| ! | GAATCGGGATTTGGAATTGG+AGG | + | chr7_3:54540926-54540945 | None:intergenic | 45.0% |
| TCCTCCAACACTTTCGGATT+CGG | - | chr7_3:54540968-54540987 | Msa1110010:three_prime_UTR | 45.0% | |
| ! | GGTGATGGTTCGAGAAATGT+AGG | + | chr7_3:54541001-54541020 | None:intergenic | 45.0% |
| ! | CCTGTCATTTCTCTTGGTGA+CGG | + | chr7_3:54541032-54541051 | None:intergenic | 45.0% |
| !! | TTCTTTGGTTCTTTCGGCTG+CGG | + | chr7_3:54541135-54541154 | None:intergenic | 45.0% |
| TAGTTAATTATCCGGTGCGG+TGG | + | chr7_3:54541304-54541323 | None:intergenic | 45.0% | |
| GTGTAGCTGAACATCGTTGA+GGG | - | chr7_3:54541478-54541497 | Msa1110010:intron | 45.0% | |
| !! | GATTTTGCAGAAGCTTTGGC+TGG | - | chr7_3:54541670-54541689 | Msa1110010:intron | 45.0% |
| ! | ACAAGGGACAAAGGAGGTAT+TGG | + | chr7_3:54542046-54542065 | None:intergenic | 45.0% |
| ATACTGAGGACAAGGGACAA+AGG | + | chr7_3:54542055-54542074 | None:intergenic | 45.0% | |
| TTGTCCCTTGTCCTCAGTAT+AGG | - | chr7_3:54542055-54542074 | Msa1110010:CDS | 45.0% | |
| CCATTCCTATACTGAGGACA+AGG | + | chr7_3:54542063-54542082 | None:intergenic | 45.0% | |
| CCTTGTCCTCAGTATAGGAA+TGG | - | chr7_3:54542060-54542079 | Msa1110010:CDS | 45.0% | |
| GTCCTCAGTATAGGAATGGA+AGG | - | chr7_3:54542064-54542083 | Msa1110010:intron | 45.0% | |
| CTCCTTCCATTCCTATACTG+AGG | + | chr7_3:54542069-54542088 | None:intergenic | 45.0% | |
| ! | ATCGATGCTAACTGGTTTCG+TGG | - | chr7_3:54543142-54543161 | Msa1110010:intron | 45.0% |
| TGTGCGTGTCGAATGTATGT+AGG | - | chr7_3:54543796-54543815 | Msa1110010:intron | 45.0% | |
| AACTCTTACCATGGGAATGC+AGG | - | chr7_3:54543914-54543933 | Msa1110010:intron | 45.0% | |
| ATTTGCTTAGGAGGGGTCTA+CGG | + | chr7_3:54544533-54544552 | None:intergenic | 45.0% | |
| !!! | TTTTTTGGGTGGTACCAGAG+TGG | - | chr7_3:54544821-54544840 | Msa1110010:intron | 45.0% |
| GTAAATCCAGACCCTTACAG+AGG | - | chr7_3:54544857-54544876 | Msa1110010:intron | 45.0% | |
| AAAAGACCTCTGTAAGGGTC+TGG | + | chr7_3:54544866-54544885 | None:intergenic | 45.0% | |
| ! | GACCCTTACAGAGGTCTTTT+TGG | - | chr7_3:54544866-54544885 | Msa1110010:intron | 45.0% |
| GAGCCAAAAAGACCTCTGTA+AGG | + | chr7_3:54544872-54544891 | None:intergenic | 45.0% | |
| !!! | AGAGGTCTTTTTGGCTCTGA+TGG | - | chr7_3:54544875-54544894 | Msa1110010:intron | 45.0% |
| TGTTTATGGTAGGGAGTTGG+TGG | - | chr7_3:54545437-54545456 | Msa1110010:intron | 45.0% | |
| TTAACACTGTCATAGGCAGC+AGG | + | chr7_3:54545491-54545510 | None:intergenic | 45.0% | |
| ATTGCTGATGAGGTTCAGTC+CGG | - | chr7_3:54545530-54545549 | Msa1110010:intron | 45.0% | |
| !! | CTATGTCAGGTTGAACACCA+TGG | + | chr7_3:54545595-54545614 | None:intergenic | 45.0% |
| GTAGTTACAACAGCACCAAG+AGG | + | chr7_3:54546069-54546088 | None:intergenic | 45.0% | |
| GTCAAGACCTTTGCAATCTC+AGG | + | chr7_3:54546093-54546112 | None:intergenic | 45.0% | |
| AATCCTGTTTGTACAGCTGC+AGG | - | chr7_3:54546144-54546163 | Msa1110010:intron | 45.0% | |
| AATCCTGCAGCTGTACAAAC+AGG | + | chr7_3:54546150-54546169 | None:intergenic | 45.0% | |
| TGTTTGTACAGCTGCAGGAT+TGG | - | chr7_3:54546149-54546168 | Msa1110010:intron | 45.0% | |
| TTGGGTCTCATCTGAAAGAG+AGG | - | chr7_3:54546223-54546242 | Msa1110010:intron | 45.0% | |
| GTAGTTGCAAACTGCCATTG+TGG | - | chr7_3:54547139-54547158 | Msa1110010:five_prime_UTR | 45.0% | |
| ! | TGGCTCATCGTTTTCCACAA+TGG | + | chr7_3:54547156-54547175 | None:intergenic | 45.0% |
| ACCAAGAGACAACGAGTTGT+TGG | + | chr7_3:54547176-54547195 | None:intergenic | 45.0% | |
| !!! | AATAATCAAAATAAATTTTA+AGG | + | chr7_3:54542403-54542422 | None:intergenic | 5.0% |
| !!! | AAAAAAAAAATACTAATTTT+GGG | + | chr7_3:54544620-54544639 | None:intergenic | 5.0% |
| !!! | AAAAAAAAAAATACTAATTT+TGG | + | chr7_3:54544621-54544640 | None:intergenic | 5.0% |
| !!! | AAAATTAGTATTTTTTTTTT+TGG | - | chr7_3:54544620-54544639 | Msa1110010:intron | 5.0% |
| CCTCCAACACTTTCGGATTC+GGG | - | chr7_3:54540969-54540988 | Msa1110010:three_prime_UTR | 50.0% | |
| CAACACTTTCGGATTCGGGT+CGG | - | chr7_3:54540973-54540992 | Msa1110010:three_prime_UTR | 50.0% | |
| !! | GTCATTTCTCTTGGTGACGG+AGG | + | chr7_3:54541029-54541048 | None:intergenic | 50.0% |
| CCGTCACCAAGAGAAATGAC+AGG | - | chr7_3:54541029-54541048 | Msa1110010:three_prime_UTR | 50.0% | |
| !! | TGCAGAAAGAGTTGGCTCTG+CGG | + | chr7_3:54541095-54541114 | None:intergenic | 50.0% |
| AGCCAACTCTTTCTGCAACG+AGG | - | chr7_3:54541098-54541117 | Msa1110010:exon | 50.0% | |
| TGCCTCGTTGCAGAAAGAGT+TGG | + | chr7_3:54541103-54541122 | None:intergenic | 50.0% | |
| ! | TAATCGAACGGTGGAAGCAC+CGG | + | chr7_3:54541176-54541195 | None:intergenic | 50.0% |
| GACGGCGGAACATAATCGAA+CGG | + | chr7_3:54541188-54541207 | None:intergenic | 50.0% | |
| TATGTTCCGCCGTCGTATTC+CGG | - | chr7_3:54541194-54541213 | Msa1110010:intron | 50.0% | |
| GGTGTAGCTGAACATCGTTG+AGG | - | chr7_3:54541477-54541496 | Msa1110010:intron | 50.0% | |
| AGATACGTTGATGCGTTCGG+AGG | - | chr7_3:54541535-54541554 | Msa1110010:intron | 50.0% | |
| GATACGTTGATGCGTTCGGA+GGG | - | chr7_3:54541536-54541555 | Msa1110010:intron | 50.0% | |
| CAATCGCTGCAACCACATCA+GGG | + | chr7_3:54541591-54541610 | None:intergenic | 50.0% | |
| ACAATCGCTGCAACCACATC+AGG | + | chr7_3:54541592-54541611 | None:intergenic | 50.0% | |
| GCTTTGGCTGGTAAACTTCC+CGG | - | chr7_3:54541682-54541701 | Msa1110010:intron | 50.0% | |
| GGCTCACTGATCCCTTAGAT+TGG | - | chr7_3:54542474-54542493 | Msa1110010:intron | 50.0% | |
| GGGGTGATATCGATGCTAAC+TGG | - | chr7_3:54543134-54543153 | Msa1110010:intron | 50.0% | |
| GCGTGTCGAATGTATGTAGG+TGG | - | chr7_3:54543799-54543818 | Msa1110010:intron | 50.0% | |
| TCTTACCATGGGAATGCAGG+TGG | - | chr7_3:54543917-54543936 | Msa1110010:intron | 50.0% | |
| CTTACCATGGGAATGCAGGT+GGG | - | chr7_3:54543918-54543937 | Msa1110010:intron | 50.0% | |
| TCAACGGAGTTTGGCATCGT+TGG | - | chr7_3:54544387-54544406 | Msa1110010:intron | 50.0% | |
| CAACGGAGTTTGGCATCGTT+GGG | - | chr7_3:54544388-54544407 | Msa1110010:intron | 50.0% | |
| CTGCATGATGAACACCACTC+TGG | + | chr7_3:54544838-54544857 | None:intergenic | 50.0% | |
| TCCGTCTGCAACTGCAATTG+CGG | + | chr7_3:54545216-54545235 | None:intergenic | 50.0% | |
| GGCATTGTTGAATTGGCACC+TGG | - | chr7_3:54545458-54545477 | Msa1110010:intron | 50.0% | |
| ! | TCGCACTGGTAGCCATTTCT+GGG | - | chr7_3:54545559-54545578 | Msa1110010:intron | 50.0% |
| GGGATTCAAAGCCCCAGAAA+TGG | + | chr7_3:54545574-54545593 | None:intergenic | 50.0% | |
| !! | TTCTGGGGCTTTGAATCCCA+TGG | - | chr7_3:54545575-54545594 | Msa1110010:intron | 50.0% |
| CGGGAGCAACTTGGCATATA+GGG | + | chr7_3:54546601-54546620 | None:intergenic | 50.0% | |
| TCGGGAGCAACTTGGCATAT+AGG | + | chr7_3:54546602-54546621 | None:intergenic | 50.0% | |
| ACAGGATATCGGGAGCAACT+TGG | + | chr7_3:54546610-54546629 | None:intergenic | 50.0% | |
| AGTTGCTCCCGATATCCTGT+AGG | - | chr7_3:54546610-54546629 | Msa1110010:CDS | 50.0% | |
| !! | GGAGTGCTGATTGGAAAAGG+TGG | - | chr7_3:54546794-54546813 | Msa1110010:intron | 50.0% |
| GCCAACAACTCGTTGTCTCT+TGG | - | chr7_3:54547172-54547191 | Msa1110010:five_prime_UTR | 50.0% | |
| !! | CCCGAATCCGAAAGTGTTGG+AGG | + | chr7_3:54540972-54540991 | None:intergenic | 55.0% |
| ! | CGACCCGAATCCGAAAGTGT+TGG | + | chr7_3:54540975-54540994 | None:intergenic | 55.0% |
| !! | CTCTTGGTGACGGAGGATTC+CGG | + | chr7_3:54541022-54541041 | None:intergenic | 55.0% |
| !! | AGAAAGAGTTGGCTCTGCGG+CGG | + | chr7_3:54541092-54541111 | None:intergenic | 55.0% |
| TTCAGCGGCGACGGTTTCTT+TGG | + | chr7_3:54541150-54541169 | None:intergenic | 55.0% | |
| GGCGGAACATAATCGAACGG+TGG | + | chr7_3:54541185-54541204 | None:intergenic | 55.0% | |
| GATATTCCCTACGCTTCGCG+AGG | + | chr7_3:54541238-54541257 | None:intergenic | 55.0% | |
| TGCGTTCGGAGGGATTGCTA+CGG | - | chr7_3:54541546-54541565 | Msa1110010:intron | 55.0% | |
| GGGATTGCTACGGTGTGTTG+CGG | - | chr7_3:54541556-54541575 | Msa1110010:CDS | 55.0% | |
| CTGAGGACAAGGGACAAAGG+AGG | + | chr7_3:54542052-54542071 | None:intergenic | 55.0% | |
| TTGGGGGATGGATGCTATGC+TGG | - | chr7_3:54543108-54543127 | Msa1110010:intron | 55.0% | |
| GATGGATGCTATGCTGGCGT+GGG | - | chr7_3:54543114-54543133 | Msa1110010:intron | 55.0% | |
| ATGGATGCTATGCTGGCGTG+GGG | - | chr7_3:54543115-54543134 | Msa1110010:intron | 55.0% | |
| ! | GGGCCACAGCTCAAAGTATC+TGG | - | chr7_3:54543948-54543967 | Msa1110010:intron | 55.0% |
| GCCGCAATTGCAGTTGCAGA+CGG | - | chr7_3:54545212-54545231 | Msa1110010:intron | 55.0% | |
| TAGGCAGCAGGCAAGTAACC+AGG | + | chr7_3:54545479-54545498 | None:intergenic | 55.0% | |
| GCTACCAGTGCGAGCAAATC+CGG | + | chr7_3:54545552-54545571 | None:intergenic | 55.0% | |
| ! | CTCGCACTGGTAGCCATTTC+TGG | - | chr7_3:54545558-54545577 | Msa1110010:intron | 55.0% |
| ! | CGCACTGGTAGCCATTTCTG+GGG | - | chr7_3:54545560-54545579 | Msa1110010:intron | 55.0% |
| ! | GTGACGGAGGATTCCGGTGA+TGG | + | chr7_3:54541016-54541035 | None:intergenic | 60.0% |
| !! | TGGAAGCACCGGTGGTTCAG+CGG | + | chr7_3:54541165-54541184 | None:intergenic | 60.0% |
| GAAGGACCGGAATACGACGG+CGG | + | chr7_3:54541203-54541222 | None:intergenic | 60.0% | |
| CCGGAAGGACCGGAATACGA+CGG | + | chr7_3:54541206-54541225 | None:intergenic | 60.0% | |
| CCGTCGTATTCCGGTCCTTC+CGG | - | chr7_3:54541203-54541222 | Msa1110010:intron | 60.0% | |
| CGGACACTGTCACCCTGATG+TGG | - | chr7_3:54541576-54541595 | Msa1110010:CDS | 60.0% | |
| GGATGGATGCTATGCTGGCG+TGG | - | chr7_3:54543113-54543132 | Msa1110010:intron | 60.0% | |
| TCGTCCCACCTGCATTCCCA+TGG | + | chr7_3:54543925-54543944 | None:intergenic | 60.0% | |
| TGGGAATGCAGGTGGGACGA+TGG | - | chr7_3:54543925-54543944 | Msa1110010:intron | 60.0% | |
| GGGAATGCAGGTGGGACGAT+GGG | - | chr7_3:54543926-54543945 | Msa1110010:intron | 60.0% | |
| GGAATGCAGGTGGGACGATG+GGG | - | chr7_3:54543927-54543946 | Msa1110010:intron | 60.0% | |
| GAATGCAGGTGGGACGATGG+GGG | - | chr7_3:54543928-54543947 | Msa1110010:intron | 60.0% | |
| ! | CAGTCCGGATTTGCTCGCAC+TGG | - | chr7_3:54545545-54545564 | Msa1110010:intron | 60.0% |
| GGCGGAGGAGGAATCTTGCG+AGG | + | chr7_3:54541061-54541080 | None:intergenic | 65.0% | |
| !! | AAGAGTTGGCTCTGCGGCGG+TGG | + | chr7_3:54541089-54541108 | None:intergenic | 65.0% |
| AACCGTCGCCGCTGAACCAC+CGG | - | chr7_3:54541154-54541173 | Msa1110010:intron | 65.0% | |
| !! | TCGAACGGTGGAAGCACCGG+TGG | + | chr7_3:54541173-54541192 | None:intergenic | 65.0% |
| ACGACGTCCTCGCGAAGCGT+AGG | - | chr7_3:54541228-54541247 | Msa1110010:intron | 65.0% | |
| CGACGTCCTCGCGAAGCGTA+GGG | - | chr7_3:54541229-54541248 | Msa1110010:intron | 65.0% | |
| ! | CCGGTGCGGTGGATTCTCAC+CGG | + | chr7_3:54541293-54541312 | None:intergenic | 65.0% |
| CCGGTGAGAATCCACCGCAC+CGG | - | chr7_3:54541290-54541309 | Msa1110010:CDS | 65.0% | |
| TCTGCGGCGGTGGTGATCGG+CGG | + | chr7_3:54541079-54541098 | None:intergenic | 70.0% | |
| GGCTCTGCGGCGGTGGTGAT+CGG | + | chr7_3:54541082-54541101 | None:intergenic | 70.0% | |
| CACCGGTGGTTCAGCGGCGA+CGG | + | chr7_3:54541159-54541178 | None:intergenic | 70.0% | |
| GACGTCGTCGCCGGAAGGAC+CGG | + | chr7_3:54541216-54541235 | None:intergenic | 70.0% | |
| CTTCGCGAGGACGTCGTCGC+CGG | + | chr7_3:54541225-54541244 | None:intergenic | 70.0% | |
| GCGGTGGTGATCGGCGGAGG+AGG | + | chr7_3:54541073-54541092 | None:intergenic | 75.0% | |
| GCGAGGACGTCGTCGCCGGA+AGG | + | chr7_3:54541221-54541240 | None:intergenic | 75.0% | |
| ! | GCGGCGGTGGTGATCGGCGG+AGG | + | chr7_3:54541076-54541095 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 54540923 | 54547204 | 54540923 | ID=Msa1110010;Name=Msa1110010 |
| chr7_3 | mRNA | 54540923 | 54547204 | 54540923 | ID=Msa1110010-mRNA-1;Parent=Msa1110010;Name=Msa1110010-mRNA-1;_AED=0.11;_eAED=0.11;_QI=121|1|1|1|1|1|9|189|481 |
| chr7_3 | exon | 54540923 | 54541155 | 54540923 | ID=Msa1110010-mRNA-1:exon:11485;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54541252 | 54541338 | 54541252 | ID=Msa1110010-mRNA-1:exon:11484;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54541550 | 54541663 | 54541550 | ID=Msa1110010-mRNA-1:exon:11483;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54541854 | 54542079 | 54541854 | ID=Msa1110010-mRNA-1:exon:11482;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54542499 | 54542678 | 54542499 | ID=Msa1110010-mRNA-1:exon:11481;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54543145 | 54543288 | 54543145 | ID=Msa1110010-mRNA-1:exon:11480;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54544139 | 54544309 | 54544139 | ID=Msa1110010-mRNA-1:exon:11479;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54546413 | 54546643 | 54546413 | ID=Msa1110010-mRNA-1:exon:11478;Parent=Msa1110010-mRNA-1 |
| chr7_3 | exon | 54546835 | 54547204 | 54546835 | ID=Msa1110010-mRNA-1:exon:11477;Parent=Msa1110010-mRNA-1 |
| chr7_3 | five_prime_UTR | 54547084 | 54547204 | 54547084 | ID=Msa1110010-mRNA-1:five_prime_utr;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54546835 | 54547083 | 54546835 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54546413 | 54546643 | 54546413 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54544139 | 54544309 | 54544139 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54543145 | 54543288 | 54543145 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54542499 | 54542678 | 54542499 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54541854 | 54542079 | 54541854 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54541550 | 54541663 | 54541550 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54541252 | 54541338 | 54541252 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | CDS | 54541112 | 54541155 | 54541112 | ID=Msa1110010-mRNA-1:cds;Parent=Msa1110010-mRNA-1 |
| chr7_3 | three_prime_UTR | 54540923 | 54541111 | 54540923 | ID=Msa1110010-mRNA-1:three_prime_utr;Parent=Msa1110010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
