Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1219790 | sp|Q9SMZ4|AASS_ARATH | 63.925 | 1070 | 311 | 11 | 2 | 1013 | 12 | 1064 | 0.0 | 1365 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1219790 | A0A072USV4 | 90.198 | 1061 | 48 | 5 | 1 | 1013 | 3 | 1055 | 0.0 | 1946 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0083240 | Msa1219790 | 0.808553 | 2.927278e-50 | -8.615850e-47 |
Msa0086190 | Msa1219790 | 0.815083 | 1.108516e-51 | -8.615850e-47 |
Msa0609420 | Msa1219790 | 0.808693 | 2.732246e-50 | -8.615850e-47 |
Msa0613800 | Msa1219790 | 0.846848 | 1.678757e-59 | -8.615850e-47 |
Msa0617040 | Msa1219790 | 0.880197 | 6.694457e-70 | -8.615850e-47 |
Msa0626180 | Msa1219790 | 0.810423 | 1.161416e-50 | -8.615850e-47 |
Msa0649820 | Msa1219790 | 0.823236 | 1.543701e-53 | -8.615850e-47 |
Msa0650060 | Msa1219790 | 0.809364 | 1.962315e-50 | -8.615850e-47 |
Msa0652700 | Msa1219790 | 0.869029 | 4.205622e-66 | -8.615850e-47 |
Msa0656100 | Msa1219790 | 0.880765 | 4.192703e-70 | -8.615850e-47 |
Msa0665610 | Msa1219790 | 0.808805 | 2.585161e-50 | -8.615850e-47 |
Msa0697020 | Msa1219790 | 0.835137 | 1.998837e-56 | -8.615850e-47 |
Msa0708600 | Msa1219790 | 0.817723 | 2.843623e-52 | -8.615850e-47 |
Msa0129640 | Msa1219790 | 0.817023 | 4.088294e-52 | -8.615850e-47 |
Msa0182020 | Msa1219790 | 0.819214 | 1.306398e-52 | -8.615850e-47 |
Msa0374790 | Msa1219790 | 0.818783 | 1.637262e-52 | -8.615850e-47 |
Msa0381470 | Msa1219790 | 0.857838 | 1.242504e-62 | -8.615850e-47 |
Msa0417060 | Msa1219790 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
Msa0424000 | Msa1219790 | 0.827604 | 1.427252e-54 | -8.615850e-47 |
Msa0434140 | Msa1219790 | 0.819303 | 1.246537e-52 | -8.615850e-47 |
Msa0458220 | Msa1219790 | 0.800480 | 1.413253e-48 | -8.615850e-47 |
Msa0470920 | Msa1219790 | 0.854169 | 1.472151e-61 | -8.615850e-47 |
Msa0476070 | Msa1219790 | 0.880102 | 7.235118e-70 | -8.615850e-47 |
Msa0480770 | Msa1219790 | 0.871499 | 6.523536e-67 | -8.615850e-47 |
Msa0481100 | Msa1219790 | 0.875714 | 2.477795e-68 | -8.615850e-47 |
Msa0982380 | Msa1219790 | 0.806249 | 9.015132e-50 | -8.615850e-47 |
Msa1026140 | Msa1219790 | 0.816421 | 5.578345e-52 | -8.615850e-47 |
Msa1038940 | Msa1219790 | 0.801606 | 8.317778e-49 | -8.615850e-47 |
Msa1064890 | Msa1219790 | 0.845739 | 3.365431e-59 | -8.615850e-47 |
Msa0268070 | Msa1219790 | 0.997295 | 4.685463e-240 | -8.615850e-47 |
Msa1110010 | Msa1219790 | 0.835870 | 1.304403e-56 | -8.615850e-47 |
Msa1153650 | Msa1219790 | 0.818859 | 1.573348e-52 | -8.615850e-47 |
Msa1217950 | Msa1219790 | 0.882141 | 1.335542e-70 | -8.615850e-47 |
Msa1219790 | Msa1267080 | 0.994074 | 2.257977e-204 | -8.615850e-47 |
Msa1219790 | Msa1401550 | 0.979730 | 1.293372e-148 | -8.615850e-47 |
Msa1219790 | Msa1412410 | 0.823201 | 1.573433e-53 | -8.615850e-47 |
Msa1219790 | Msa1427860 | 0.815664 | 8.233687e-52 | -8.615850e-47 |
Msa1219790 | Msa1462640 | 0.849695 | 2.742222e-60 | -8.615850e-47 |
Msa0519910 | Msa1219790 | 0.843933 | 1.033074e-58 | -8.615850e-47 |
Msa0521720 | Msa1219790 | 0.802202 | 6.273449e-49 | -8.615850e-47 |
Msa0524670 | Msa1219790 | 0.804298 | 2.310209e-49 | -8.615850e-47 |
Msa0530790 | Msa1219790 | 0.805293 | 1.431436e-49 | -8.615850e-47 |
Msa0559770 | Msa1219790 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
Msa0562800 | Msa1219790 | 0.840475 | 8.505308e-58 | -8.615850e-47 |
Msa0577370 | Msa1219790 | 0.838863 | 2.233912e-57 | -8.615850e-47 |
Msa0586160 | Msa1219790 | 0.818569 | 1.830650e-52 | -8.615850e-47 |
Msa0587630 | Msa1219790 | 0.806771 | 6.997063e-50 | -8.615850e-47 |
Msa0602180 | Msa1219790 | 0.804892 | 1.736316e-49 | -8.615850e-47 |
Msa0945230 | Msa1219790 | 0.869457 | 3.051553e-66 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1219790 | MtrunA17_Chr4g0069831 | 89.444 | 1061 | 49 | 5 | 1 | 1013 | 3 | 1048 | 0.0 | 1924 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1219790 | AT4G33150.1 | 64.112 | 1070 | 309 | 11 | 2 | 1013 | 12 | 1064 | 0.0 | 1371 |
Msa1219790 | AT4G33150.2 | 64.112 | 1070 | 309 | 11 | 2 | 1013 | 12 | 1064 | 0.0 | 1371 |
Msa1219790 | AT4G33150.4 | 64.112 | 1070 | 309 | 11 | 2 | 1013 | 12 | 1064 | 0.0 | 1371 |
Msa1219790 | AT4G33150.3 | 64.315 | 482 | 164 | 3 | 538 | 1013 | 3 | 482 | 0.0 | 644 |
Find 226 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCGCAACTCTTTAATTTA+TGG | 0.062968 | 8_1:+82703637 | Msa1219790:CDS |
AATAGATGTTGATATCATTT+TGG | 0.140848 | 8_1:+82701386 | Msa1219790:CDS |
TATCAGAATCTGTGAATAAA+TGG | 0.154234 | 8_1:+82696368 | Msa1219790:CDS |
AGAAGGTTGAACAATAATTT+TGG | 0.164479 | 8_1:-82696455 | None:intergenic |
CTTTCTGTGCTTTGTGAGTA+TGG | 0.176342 | 8_1:-82696871 | None:intergenic |
CTTACAATAGCCTCTTAAAA+TGG | 0.185435 | 8_1:+82700220 | Msa1219790:CDS |
GAATTGATTGTTGGAGAAAA+TGG | 0.208921 | 8_1:+82697047 | Msa1219790:CDS |
TTAATTTATGGAGATTTATA+TGG | 0.210990 | 8_1:+82703649 | Msa1219790:CDS |
AAACACTTTCATGGGATCTT+TGG | 0.220013 | 8_1:-82698178 | None:intergenic |
GCCTCTTAAAATGGGCTTGC+AGG | 0.242595 | 8_1:+82700229 | Msa1219790:CDS |
TGTAGTTCACTTAGTTTAGA+TGG | 0.273032 | 8_1:-82697887 | None:intergenic |
TTGATGTGGTTTATGTGTTT+TGG | 0.291333 | 8_1:-82705805 | None:intergenic |
GGGAAAAGATTACTTGCATT+TGG | 0.294277 | 8_1:+82697068 | Msa1219790:CDS |
AATGGATTGTTGGCATCTTC+AGG | 0.309153 | 8_1:-82702887 | None:intergenic |
CAATTGATTCACCCTTCTTC+AGG | 0.309166 | 8_1:+82698741 | Msa1219790:CDS |
CTTAGTTAATTGCATGTATT+GGG | 0.310022 | 8_1:+82698586 | Msa1219790:intron |
TAGATGGATCCACAAAAGTA+TGG | 0.312041 | 8_1:-82697871 | None:intergenic |
CTGCAGCTTCAATAATATCT+AGG | 0.319514 | 8_1:-82700451 | None:intergenic |
AACACTTTCATGGGATCTTT+GGG | 0.324739 | 8_1:-82698177 | None:intergenic |
AGATCATGGCGACACTTTCT+AGG | 0.327865 | 8_1:+82703913 | Msa1219790:CDS |
AGAGCTACTTTGCTTGAATT+CGG | 0.328075 | 8_1:+82704691 | Msa1219790:CDS |
AAGAAGGCATAAGCTCTATT+TGG | 0.328153 | 8_1:-82696845 | None:intergenic |
CACTTTGTCAAACACTTTCA+TGG | 0.328950 | 8_1:-82698187 | None:intergenic |
GCACCATACACATCCGTAAT+TGG | 0.329740 | 8_1:+82698377 | Msa1219790:CDS |
TACCTGAATTTATATGCTAA+TGG | 0.330123 | 8_1:-82702905 | None:intergenic |
ACAACACAAGGATTCATTTC+TGG | 0.333123 | 8_1:+82696196 | Msa1219790:five_prime_UTR |
AGCTGAATTCCAGTTACATT+TGG | 0.335411 | 8_1:-82701554 | None:intergenic |
GAAAGAAAACATGCCTTTGC+TGG | 0.339421 | 8_1:+82696889 | Msa1219790:CDS |
TCCTTTCTTGTAGTTTGCTC+TGG | 0.349399 | 8_1:+82697821 | Msa1219790:intron |
GATGCTGGTATAACAATTCT+TGG | 0.355805 | 8_1:+82702308 | Msa1219790:CDS |
ATACCTGCTCTGCATCCTTC+AGG | 0.358896 | 8_1:-82701419 | None:intergenic |
GAGCTACTTTGCTTGAATTC+GGG | 0.360095 | 8_1:+82704692 | Msa1219790:CDS |
ATTCAAGATTTGATGAGAAA+TGG | 0.360260 | 8_1:+82698644 | Msa1219790:CDS |
AGAAGTAAGAGGAAGATGTT+TGG | 0.360331 | 8_1:+82696325 | Msa1219790:exon |
TATGGAGATTTATATGGAAT+AGG | 0.360466 | 8_1:+82703655 | Msa1219790:CDS |
GATAAGAGAATGGCTATAAC+AGG | 0.360990 | 8_1:+82699864 | Msa1219790:CDS |
GGCGAAACTTTACATATTGA+TGG | 0.362283 | 8_1:+82703270 | Msa1219790:CDS |
TGCAGATGATAAGGCTGTTC+TGG | 0.367690 | 8_1:+82701104 | Msa1219790:CDS |
TATGATTATGAATTGATTGT+TGG | 0.372175 | 8_1:+82697038 | Msa1219790:CDS |
AAAATTGGAGTGTAATGTTC+AGG | 0.372458 | 8_1:-82698341 | None:intergenic |
TCTTAGTTAATTGCATGTAT+TGG | 0.375626 | 8_1:+82698585 | Msa1219790:intron |
TCCAACAGAATTTGCAAAAG+AGG | 0.376427 | 8_1:+82699819 | Msa1219790:intron |
ACTCAAAAGAGGTTTGGATT+TGG | 0.379545 | 8_1:-82705746 | None:intergenic |
TCTCCTATCAATGCTCCATC+TGG | 0.384278 | 8_1:-82704038 | None:intergenic |
GGTATTCTATCTCCACTTCA+TGG | 0.384578 | 8_1:-82704642 | None:intergenic |
CTGGATATTATACAAGCTTA+TGG | 0.384591 | 8_1:+82705523 | Msa1219790:CDS |
TCACCCTGTGGTCTCATCCT+TGG | 0.386368 | 8_1:+82696541 | Msa1219790:CDS |
GAAGGCATTCCAAATGTAAC+TGG | 0.386769 | 8_1:+82701545 | Msa1219790:CDS |
TCCAGCTGCTGTGGGAGCTC+TGG | 0.387534 | 8_1:+82704765 | Msa1219790:CDS |
GCGTGGTATATAATCATATA+AGG | 0.391117 | 8_1:-82700050 | None:intergenic |
TCTCTCCTCCATGCGGAAAC+AGG | 0.392544 | 8_1:-82704279 | None:intergenic |
TCCTTCCTTGGCTGCTGCTA+AGG | 0.392618 | 8_1:+82697320 | Msa1219790:CDS |
ATCCATTAGCATATAAATTC+AGG | 0.392846 | 8_1:+82702903 | Msa1219790:CDS |
TACTAGGTCATACCTATTCC+TGG | 0.394462 | 8_1:-82702347 | None:intergenic |
CCTAGGACTCAAAAGAGGTT+TGG | 0.396350 | 8_1:-82705752 | None:intergenic |
GCAGATATAACTTGTGATAT+AGG | 0.397513 | 8_1:+82698686 | Msa1219790:CDS |
AGTTTCGCCGTGATATTTGT+AGG | 0.400233 | 8_1:-82703256 | None:intergenic |
GCTCAAATGCTATCATCATT+TGG | 0.400718 | 8_1:+82701315 | Msa1219790:CDS |
TAAATTAAAGAGTTGCGGTT+TGG | 0.402978 | 8_1:-82703634 | None:intergenic |
TGATGAATTCTCTTAGTAGA+AGG | 0.407101 | 8_1:-82696472 | None:intergenic |
GATCCAGATGGAGCATTGAT+AGG | 0.408026 | 8_1:+82704035 | Msa1219790:CDS |
TGTAGTTTGCTCTGGTGCTC+AGG | 0.408673 | 8_1:+82697829 | Msa1219790:intron |
TTTATATGCTAATGGATTGT+TGG | 0.411001 | 8_1:-82702897 | None:intergenic |
TCACCTGGAGTGTATACTTC+AGG | 0.415501 | 8_1:-82704927 | None:intergenic |
GCAACTCAGGGATTGCCATT+GGG | 0.415806 | 8_1:+82697372 | Msa1219790:CDS |
CCGATATCACCTACCAATTA+CGG | 0.420149 | 8_1:-82698390 | None:intergenic |
AATTGATTGTTGGAGAAAAT+GGG | 0.428975 | 8_1:+82697048 | Msa1219790:CDS |
CCGTGATATTTGTAGGTGGC+AGG | 0.430034 | 8_1:-82703249 | None:intergenic |
ATGATTCAGCTAAAAGACTA+AGG | 0.430434 | 8_1:+82703575 | Msa1219790:CDS |
ACCAGAGCTCCCACAGCAGC+TGG | 0.430788 | 8_1:-82704766 | None:intergenic |
TTTGAGGTTTGAGAAGTAAG+AGG | 0.431237 | 8_1:+82696314 | Msa1219790:five_prime_UTR |
GAATTCGGGAAAACTATTGA+TGG | 0.431573 | 8_1:+82704706 | Msa1219790:CDS |
TTACAATAGCCTCTTAAAAT+GGG | 0.431601 | 8_1:+82700221 | Msa1219790:CDS |
TATAATCATATAAGGAGGTT+AGG | 0.433937 | 8_1:-82700042 | None:intergenic |
GAAGTAAGAGGAAGATGTTT+GGG | 0.434278 | 8_1:+82696326 | Msa1219790:exon |
ATTGCATGTATTGGGAGAAA+AGG | 0.438391 | 8_1:+82698594 | Msa1219790:CDS |
CATGTCCATGCTAGATGATA+AGG | 0.441776 | 8_1:+82702280 | Msa1219790:CDS |
AGATCAGTGCAGATTGTTGA+AGG | 0.443060 | 8_1:+82701527 | Msa1219790:intron |
TTCAGACAAGAGGTGTCTTA+AGG | 0.444078 | 8_1:+82704895 | Msa1219790:CDS |
AAACATGCCTTTGCTGGATA+AGG | 0.445017 | 8_1:+82696895 | Msa1219790:CDS |
ATTGATTTCTTGCGTGGATT+GGG | 0.450552 | 8_1:+82697116 | Msa1219790:CDS |
TGATCAATTTCTGATAAATG+AGG | 0.450882 | 8_1:+82700427 | Msa1219790:CDS |
ATGTTTGGGAACGGTGTTGT+TGG | 0.453688 | 8_1:+82696340 | Msa1219790:CDS |
GGTGAGATGGGCTTGGACCC+AGG | 0.453772 | 8_1:+82702329 | Msa1219790:CDS |
ATGGGCTTGGACCCAGGAAT+AGG | 0.458978 | 8_1:+82702335 | Msa1219790:CDS |
ATCAGAATCTGTGAATAAAT+GGG | 0.459403 | 8_1:+82696369 | Msa1219790:CDS |
AGAAGAGCTTGCATAGTCAA+TGG | 0.461068 | 8_1:+82700013 | Msa1219790:CDS |
GATAGGAGAGGAGGATATAT+CGG | 0.461696 | 8_1:+82704052 | Msa1219790:CDS |
TTTCTGTGCTTTGTGAGTAT+GGG | 0.463164 | 8_1:-82696870 | None:intergenic |
CCAATGGTATAAAACATTGT+TGG | 0.463677 | 8_1:+82701344 | Msa1219790:CDS |
ACAGGTTGGTGCAGATGATA+AGG | 0.465036 | 8_1:+82701095 | Msa1219790:intron |
ATGGCGACACTTTCTAGGAT+TGG | 0.465848 | 8_1:+82703918 | Msa1219790:CDS |
ATCATACATGTATCCTTCCT+TGG | 0.466001 | 8_1:+82697308 | Msa1219790:CDS |
AGATTACTTCATCATGGAAC+TGG | 0.467747 | 8_1:+82696427 | Msa1219790:CDS |
GATTGATTTCTTGCGTGGAT+TGG | 0.470829 | 8_1:+82697115 | Msa1219790:CDS |
AATTCTTGGTGAGATGGGCT+TGG | 0.470872 | 8_1:+82702322 | Msa1219790:CDS |
CAGCTGGAATACCAACAGTA+AGG | 0.471355 | 8_1:-82704750 | None:intergenic |
TGCAACTCAGGGATTGCCAT+TGG | 0.471975 | 8_1:+82697371 | Msa1219790:CDS |
AAAGCAAAAGCAGGAAAGTC+AGG | 0.472612 | 8_1:-82703601 | None:intergenic |
AAAGCACTATGGCATGAAGC+AGG | 0.474044 | 8_1:-82704248 | None:intergenic |
TCACAACACAACCATAAACT+TGG | 0.477682 | 8_1:-82698134 | None:intergenic |
CAACTCAGGGATTGCCATTG+GGG | 0.478672 | 8_1:+82697373 | Msa1219790:CDS |
CTCTCCTCATTCTTTAGAGT+CGG | 0.479336 | 8_1:-82703963 | None:intergenic |
CTCCATAAATTAAAGAGTTG+CGG | 0.481371 | 8_1:-82703639 | None:intergenic |
CTACCAATTACGGATGTGTA+TGG | 0.482470 | 8_1:-82698380 | None:intergenic |
GAAGCATCAACTGTCTTTCG+TGG | 0.483593 | 8_1:+82703682 | Msa1219790:CDS |
AGTAAAATTTCACTTACGCT+TGG | 0.484189 | 8_1:+82701198 | Msa1219790:CDS |
ATAACAATTCTTGGTGAGAT+GGG | 0.485910 | 8_1:+82702317 | Msa1219790:CDS |
TATAACAATTCTTGGTGAGA+TGG | 0.488831 | 8_1:+82702316 | Msa1219790:CDS |
TGCAGCCTTAGCAGCAGCCA+AGG | 0.493775 | 8_1:-82697325 | None:intergenic |
ACTTTGTCAAACACTTTCAT+GGG | 0.496078 | 8_1:-82698186 | None:intergenic |
ATCCTACTCCAACACAGAAA+AGG | 0.497780 | 8_1:+82704304 | Msa1219790:CDS |
TGTTGGTATTCCAGCTGCTG+TGG | 0.499554 | 8_1:+82704756 | Msa1219790:CDS |
GTGAATCAATTGACGTAGTT+CGG | 0.500039 | 8_1:-82698730 | None:intergenic |
CTTGGTAAAGTTCATGAAAA+CGG | 0.501285 | 8_1:+82701216 | Msa1219790:CDS |
ACTAAGTGAACTACATAAGA+TGG | 0.503097 | 8_1:+82697895 | Msa1219790:CDS |
TGGTGAAGAAATTGCAACTC+AGG | 0.505018 | 8_1:+82697359 | Msa1219790:CDS |
TGTTTGGGAACGGTGTTGTT+GGG | 0.505431 | 8_1:+82696341 | Msa1219790:CDS |
CAAGCTCTTCTTAAATGAGC+AGG | 0.507376 | 8_1:-82700001 | None:intergenic |
GTAACAGGGTATCTAAGTCT+TGG | 0.508597 | 8_1:+82697255 | Msa1219790:intron |
CCTGTAGGTGCCATCCGAGC+TGG | 0.508824 | 8_1:+82703219 | Msa1219790:CDS |
GTACCTGAAGGATGCAGAGC+AGG | 0.509916 | 8_1:+82701416 | Msa1219790:CDS |
CCAGCTCGGATGGCACCTAC+AGG | 0.510844 | 8_1:-82703219 | None:intergenic |
AGGCAACATCAAAAGCACTA+TGG | 0.511973 | 8_1:-82704259 | None:intergenic |
CCACTTGGTTAACTGTCATG+TGG | 0.512401 | 8_1:+82700484 | Msa1219790:CDS |
CCTCTTAAAATGGGCTTGCA+GGG | 0.512553 | 8_1:+82700230 | Msa1219790:CDS |
TTTGGGATCTTTGTACCTGA+AGG | 0.513179 | 8_1:+82701404 | Msa1219790:CDS |
TATAGGGTTTAGTGAGATCA+TGG | 0.516919 | 8_1:+82703899 | Msa1219790:intron |
CTAGATATTATTGAAGCTGC+AGG | 0.517883 | 8_1:+82700452 | Msa1219790:CDS |
AAGAACACGTGATTCTTACA+AGG | 0.522569 | 8_1:-82696234 | None:intergenic |
CGTAGCAAATGCTTGCATTG+AGG | 0.522620 | 8_1:+82701870 | Msa1219790:CDS |
AGGATTGCGTCCAGCTCGGA+TGG | 0.524365 | 8_1:-82703229 | None:intergenic |
GCCTTAGCAGCAGCCAAGGA+AGG | 0.525409 | 8_1:-82697321 | None:intergenic |
TGCAGGAGGCTCCTTCCACT+TGG | 0.526358 | 8_1:+82700469 | Msa1219790:CDS |
CCGCTGGTTGTTTGATGCCA+AGG | 0.527121 | 8_1:-82696558 | None:intergenic |
AGATGGATCCACAAAAGTAT+GGG | 0.528191 | 8_1:-82697870 | None:intergenic |
TCATGAAAACGGCATGGAGA+AGG | 0.528840 | 8_1:+82701227 | Msa1219790:CDS |
AGAAATGGATGTCCACTTGT+TGG | 0.530432 | 8_1:+82698659 | Msa1219790:CDS |
TTGTTGGCATCTTCAGGAGA+TGG | 0.531880 | 8_1:-82702881 | None:intergenic |
GCTACGATAATGTGACAACT+AGG | 0.532719 | 8_1:-82701853 | None:intergenic |
TTTAGCCTTATCATCTAGCA+TGG | 0.533798 | 8_1:-82702285 | None:intergenic |
GATGATAAGGCTAAAGATGC+TGG | 0.536549 | 8_1:+82702293 | Msa1219790:CDS |
TAAGTGTCTTGTACATCCAT+TGG | 0.537155 | 8_1:+82699842 | Msa1219790:CDS |
GTGTATACTTCAGGTTGGAT+AGG | 0.540931 | 8_1:-82704918 | None:intergenic |
TGCAGCTTCAATAATATCTA+GGG | 0.544465 | 8_1:-82700450 | None:intergenic |
ACATCCATTGGATAAGAGAA+TGG | 0.544877 | 8_1:+82699854 | Msa1219790:CDS |
TGGAGCATTGATAGGAGAGG+AGG | 0.547265 | 8_1:+82704043 | Msa1219790:CDS |
TGTGCTAGATTACTTCATCA+TGG | 0.548301 | 8_1:+82696421 | Msa1219790:CDS |
AAGGCTGCAGTCATTTCTGT+TGG | 0.549082 | 8_1:+82697339 | Msa1219790:CDS |
CTACGATAATGTGACAACTA+GGG | 0.550212 | 8_1:-82701852 | None:intergenic |
ATATGGTGTATACCTGAAGA+AGG | 0.551418 | 8_1:-82698753 | None:intergenic |
GTTGGTATTCCAGCTGCTGT+GGG | 0.551669 | 8_1:+82704757 | Msa1219790:CDS |
GATGATAGCATTTGAGCAGC+TGG | 0.553928 | 8_1:-82701309 | None:intergenic |
GATGATCCAAGTGACAGAAA+AGG | 0.555873 | 8_1:-82697288 | None:intergenic |
CACTTGGTTAACTGTCATGT+GGG | 0.556353 | 8_1:+82700485 | Msa1219790:CDS |
GATGCCAAGGATGAGACCAC+AGG | 0.558412 | 8_1:-82696545 | None:intergenic |
TTTAAGAGGCTATTGTAAGT+GGG | 0.560808 | 8_1:-82700216 | None:intergenic |
ACTGCCATGGCCCTTACTGT+TGG | 0.561603 | 8_1:+82704739 | Msa1219790:CDS |
TGGAATTCAGCTTGATGTGA+TGG | 0.562069 | 8_1:+82701565 | Msa1219790:CDS |
AGATGGAAGTCCACCACAGT+AGG | 0.563553 | 8_1:-82702864 | None:intergenic |
ATAGCCATTCTCTTATCCAA+TGG | 0.564301 | 8_1:-82699858 | None:intergenic |
TTCAGTTGGATTAGCAAGAG+AGG | 0.565861 | 8_1:-82701148 | None:intergenic |
ACAAACAAAATTCAGACAAG+AGG | 0.572985 | 8_1:+82704885 | Msa1219790:CDS |
TTTGTGAGTATGGGAAAAGA+AGG | 0.573414 | 8_1:-82696861 | None:intergenic |
AGACATTCCAAAGCAAAAGC+AGG | 0.573853 | 8_1:-82703610 | None:intergenic |
CGACGAGGCACATATGCAGA+AGG | 0.575121 | 8_1:+82702820 | Msa1219790:CDS |
CTATCGTTCTACATCAGCAA+TGG | 0.575994 | 8_1:+82705675 | Msa1219790:three_prime_UTR |
GATGCTCTCTATGAAGAAGT+TGG | 0.580939 | 8_1:+82696496 | Msa1219790:CDS |
ATATCTGCTATTCCAACAAG+TGG | 0.581840 | 8_1:-82698671 | None:intergenic |
ACTAGGTCATACCTATTCCT+GGG | 0.582968 | 8_1:-82702346 | None:intergenic |
CATCATTTGGATCCAGCCAA+TGG | 0.586441 | 8_1:+82701328 | Msa1219790:CDS |
TGGCAGGATTGCGTCCAGCT+CGG | 0.586821 | 8_1:-82703233 | None:intergenic |
TCTTTCACTTCCTACTGTGG+TGG | 0.587351 | 8_1:+82702854 | Msa1219790:CDS |
GGTGAAGAAATTGCAACTCA+GGG | 0.588076 | 8_1:+82697360 | Msa1219790:CDS |
GCACAGTGTGATGGAGTCAA+AGG | 0.595862 | 8_1:-82696403 | None:intergenic |
CTTATCATCTAGCATGGACA+TGG | 0.596716 | 8_1:-82702279 | None:intergenic |
TATTTCAGCTGGAATCCTGT+AGG | 0.596927 | 8_1:+82703204 | Msa1219790:intron |
CAACCTGAAGTATACACTCC+AGG | 0.596974 | 8_1:+82704924 | Msa1219790:CDS |
AGCTGGAATACCAACAGTAA+GGG | 0.599510 | 8_1:-82704749 | None:intergenic |
GAAACTAATCAAGCAAGGCA+TGG | 0.601563 | 8_1:+82698096 | Msa1219790:CDS |
CTGGAGTGTATACTTCAGGT+TGG | 0.602410 | 8_1:-82704923 | None:intergenic |
GAGTCAGATTTGCGCATGCG+TGG | 0.604903 | 8_1:-82700067 | None:intergenic |
AACAGGAAACTAATCAAGCA+AGG | 0.605183 | 8_1:+82698091 | Msa1219790:intron |
GGAATGATTGATTTCTTGCG+TGG | 0.606806 | 8_1:+82697110 | Msa1219790:CDS |
TGATGTTGCCTGTTTCCGCA+TGG | 0.607057 | 8_1:+82704271 | Msa1219790:CDS |
TCATCCGACTCTAAAGAATG+AGG | 0.610462 | 8_1:+82703959 | Msa1219790:CDS |
AGTAATCTAGCACAGTGTGA+TGG | 0.610805 | 8_1:-82696412 | None:intergenic |
AAATTGGAGTGTAATGTTCA+GGG | 0.611393 | 8_1:-82698340 | None:intergenic |
AAGAGGAAGATGTTTGGGAA+CGG | 0.612656 | 8_1:+82696331 | Msa1219790:exon |
AAGTCTTTCACTTCCTACTG+TGG | 0.613298 | 8_1:+82702851 | Msa1219790:CDS |
AAGATCCTAGGACTCAAAAG+AGG | 0.614343 | 8_1:-82705757 | None:intergenic |
TACGATAATGTGACAACTAG+GGG | 0.615232 | 8_1:-82701851 | None:intergenic |
GAGAGGAGGATATATCGGAA+AGG | 0.615819 | 8_1:+82704057 | Msa1219790:CDS |
AAGCACTATGGCATGAAGCA+GGG | 0.617713 | 8_1:-82704247 | None:intergenic |
GTCTGACAGGTTTCTCTGAG+CGG | 0.621105 | 8_1:+82700395 | Msa1219790:intron |
AGATGGAGCATTGATAGGAG+AGG | 0.625287 | 8_1:+82704040 | Msa1219790:CDS |
TAAAGTTCATGAAAACGGCA+TGG | 0.629653 | 8_1:+82701221 | Msa1219790:CDS |
ATGACAGTTAACCAAGTGGA+AGG | 0.634711 | 8_1:-82700480 | None:intergenic |
CCTGCCACCTACAAATATCA+CGG | 0.645275 | 8_1:+82703249 | Msa1219790:CDS |
ATCTGCTTATAGCTTAACAA+CGG | 0.647351 | 8_1:-82698623 | None:intergenic |
GATATAACTTGTGATATAGG+TGG | 0.647734 | 8_1:+82698689 | Msa1219790:CDS |
TATTCACAAGTCACAACACA+AGG | 0.648837 | 8_1:+82696184 | Msa1219790:five_prime_UTR |
ACACGCACCTTATCCAGCAA+AGG | 0.648996 | 8_1:-82696902 | None:intergenic |
TGCTTATAGCTTAACAACGG+AGG | 0.649696 | 8_1:-82698620 | None:intergenic |
GATATTATTGAAGCTGCAGG+AGG | 0.652514 | 8_1:+82700455 | Msa1219790:CDS |
AATACCAACAGTAAGGGCCA+TGG | 0.655144 | 8_1:-82704743 | None:intergenic |
TCACAAGACTTGTCACCCTG+TGG | 0.655585 | 8_1:+82696529 | Msa1219790:CDS |
ATGCCAAGGATGAGACCACA+GGG | 0.658340 | 8_1:-82696544 | None:intergenic |
ATTGTTCGCGAAGATCCAGA+TGG | 0.664052 | 8_1:+82704023 | Msa1219790:CDS |
ACGAGAGGACAAATCCCCAA+TGG | 0.665124 | 8_1:-82697387 | None:intergenic |
CCACATGACAGTTAACCAAG+TGG | 0.665864 | 8_1:-82700484 | None:intergenic |
GATGGATCCACAAAAGTATG+GGG | 0.670075 | 8_1:-82697869 | None:intergenic |
TCGGAAAGGATATTAACACT+AGG | 0.670943 | 8_1:+82704071 | Msa1219790:CDS |
TGATGATCCAGATCACATGA+TGG | 0.673821 | 8_1:+82702784 | Msa1219790:intron |
TTCGCCGTGATATTTGTAGG+TGG | 0.679497 | 8_1:-82703253 | None:intergenic |
GACGAGGCACATATGCAGAA+GGG | 0.682146 | 8_1:+82702821 | Msa1219790:CDS |
TGGTATATAATCATATAAGG+AGG | 0.687295 | 8_1:-82700047 | None:intergenic |
TATGGTGTATACCTGAAGAA+GGG | 0.691493 | 8_1:-82698752 | None:intergenic |
AGAGCTTGCATAGTCAATGG+AGG | 0.692452 | 8_1:+82700016 | Msa1219790:CDS |
CAAGAGCAAATACAAGACAT+CGG | 0.695369 | 8_1:+82700287 | Msa1219790:CDS |
TGTTGCCTGTTTCCGCATGG+AGG | 0.700266 | 8_1:+82704274 | Msa1219790:CDS |
TGTTGTGATAGCTCAAGACA+TGG | 0.703959 | 8_1:+82698149 | Msa1219790:CDS |
CCTTGGCATCAAACAACCAG+CGG | 0.704811 | 8_1:+82696558 | Msa1219790:CDS |
AGGATAGTCTCTCCTCCATG+CGG | 0.707814 | 8_1:-82704286 | None:intergenic |
GGCAATGAAGATGATCGACG+AGG | 0.724936 | 8_1:+82702805 | Msa1219790:CDS |
ACGATAATGTGACAACTAGG+GGG | 0.726794 | 8_1:-82701850 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAATAATGTAAGATT+AGG | - | chr8_1:82697158-82697177 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTAAGCAAAA+TGG | - | chr8_1:82699579-82699598 | None:intergenic | 10.0% |
!!! | GTCTTTTTTTTTTTTTTTAA+TGG | + | chr8_1:82700993-82701012 | Msa1219790:intron | 10.0% |
!!! | TTTAATGTAAGAAATATTTT+TGG | + | chr8_1:82702130-82702149 | Msa1219790:intron | 10.0% |
!! | TTCTTTATAATTATAGTAAT+TGG | + | chr8_1:82705323-82705342 | Msa1219790:intron | 10.0% |
!!! | TGATTAAAACTTTTTTGTTT+TGG | - | chr8_1:82696293-82696312 | None:intergenic | 15.0% |
!!! | ATTAAGTTTTTGGTAAATTA+AGG | + | chr8_1:82696624-82696643 | Msa1219790:intron | 15.0% |
!!! | TATATATATGATGATGATAA+TGG | + | chr8_1:82696790-82696809 | Msa1219790:intron | 15.0% |
!! | AACTTATAAAAACCATTATT+TGG | + | chr8_1:82697950-82697969 | Msa1219790:intron | 15.0% |
!! | TGTTAAACAAAGTAAATATA+TGG | - | chr8_1:82698075-82698094 | None:intergenic | 15.0% |
!!! | ATATATTTACTTTGTTTAAC+AGG | + | chr8_1:82698074-82698093 | Msa1219790:intron | 15.0% |
!! | TTTATCTTTAATCTAAACTA+AGG | - | chr8_1:82699066-82699085 | None:intergenic | 15.0% |
!! | ATAGATGAAATGTTATTAAT+GGG | - | chr8_1:82699249-82699268 | None:intergenic | 15.0% |
!!! | TAATTTTCTGAAATTATTAC+TGG | - | chr8_1:82699649-82699668 | None:intergenic | 15.0% |
!! | TTTAATTCAACATCATATAT+GGG | - | chr8_1:82699713-82699732 | None:intergenic | 15.0% |
!! | ATTTAATTCAACATCATATA+TGG | - | chr8_1:82699714-82699733 | None:intergenic | 15.0% |
!! | ATACAAATTTATTACAGTTA+AGG | - | chr8_1:82700137-82700156 | None:intergenic | 15.0% |
!!! | AACAAATAGGTTTTTTATTT+TGG | + | chr8_1:82700660-82700679 | Msa1219790:intron | 15.0% |
!! | AAAGAATTATATTGTTCAAA+TGG | - | chr8_1:82700689-82700708 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAACTATGC+TGG | - | chr8_1:82701742-82701761 | None:intergenic | 15.0% |
!! | ATTAGAAAATATTTGTGTAA+TGG | + | chr8_1:82702594-82702613 | Msa1219790:intron | 15.0% |
!! | TTAATTTATGGAGATTTATA+TGG | + | chr8_1:82703649-82703668 | Msa1219790:CDS | 15.0% |
!!! | ATTTTTAAATTAACAAATCC+AGG | + | chr8_1:82703816-82703835 | Msa1219790:intron | 15.0% |
!!! | GTATAGAAATTTTATCTTTA+TGG | + | chr8_1:82703853-82703872 | Msa1219790:intron | 15.0% |
!!! | AAAAAGTATATTCTAACAAA+TGG | - | chr8_1:82704978-82704997 | None:intergenic | 15.0% |
!!! | AGATTTTTTTTTAGAACTTT+AGG | + | chr8_1:82705087-82705106 | Msa1219790:intron | 15.0% |
!!! | AAAAGTAGAAATCAATTTTT+TGG | - | chr8_1:82705365-82705384 | None:intergenic | 15.0% |
!!! | AAAAAGTTTTAATCAGTTTG+AGG | + | chr8_1:82696298-82696317 | Msa1219790:five_prime_UTR | 20.0% |
!! | TATGATTATGAATTGATTGT+TGG | + | chr8_1:82697038-82697057 | Msa1219790:CDS | 20.0% |
!!! | AAAAGAATTTTCCAAGTTTA+TGG | + | chr8_1:82698123-82698142 | Msa1219790:CDS | 20.0% |
!! | GCAATTCAAAATTATTTCAA+AGG | - | chr8_1:82698944-82698963 | None:intergenic | 20.0% |
!! | CATAGATGAAATGTTATTAA+TGG | - | chr8_1:82699250-82699269 | None:intergenic | 20.0% |
!! | ATCAAAAGAGAAATCTAATT+TGG | - | chr8_1:82699379-82699398 | None:intergenic | 20.0% |
!! | AAAAAAAACTGACATAAGTA+CGG | + | chr8_1:82699594-82699613 | Msa1219790:intron | 20.0% |
!! | AATTGAATATAACCATATGT+CGG | + | chr8_1:82699673-82699692 | Msa1219790:intron | 20.0% |
!!! | CATTCAATTTTATTATGACT+AGG | + | chr8_1:82699904-82699923 | Msa1219790:intron | 20.0% |
!! | TCAGTATTATTATTATCCAT+TGG | + | chr8_1:82700324-82700343 | Msa1219790:intron | 20.0% |
!!! | TTTTGATTCTATATCATACT+CGG | + | chr8_1:82700514-82700533 | Msa1219790:CDS | 20.0% |
!!! | ACATTCAAGTTTGAAATAAA+TGG | - | chr8_1:82700556-82700575 | None:intergenic | 20.0% |
!!! | GAAAATCTATTATTTTCAGT+TGG | - | chr8_1:82701165-82701184 | None:intergenic | 20.0% |
!!! | AATAGATGTTGATATCATTT+TGG | + | chr8_1:82701386-82701405 | Msa1219790:CDS | 20.0% |
!!! | ATAGATGTTGATATCATTTT+GGG | + | chr8_1:82701387-82701406 | Msa1219790:CDS | 20.0% |
!!! | TAATGTACAAGCAAATATTT+TGG | - | chr8_1:82701450-82701469 | None:intergenic | 20.0% |
!! | CAAAAACAAATGTTAAGATA+TGG | - | chr8_1:82701790-82701809 | None:intergenic | 20.0% |
!! | AACTAAAATGATATCTCTTT+AGG | + | chr8_1:82701928-82701947 | Msa1219790:intron | 20.0% |
!! | TGATAATTGAATATCAGAAT+AGG | - | chr8_1:82702376-82702395 | None:intergenic | 20.0% |
!!! | ATATTCAATTATCATTTTCC+AGG | + | chr8_1:82702382-82702401 | Msa1219790:intron | 20.0% |
!!! | ATTTTCTTTAAATGTGATCT+TGG | + | chr8_1:82702493-82702512 | Msa1219790:intron | 20.0% |
!!! | ATTTTCTTTAGTTTGACTAT+TGG | + | chr8_1:82703432-82703451 | Msa1219790:intron | 20.0% |
!!! | ACTGAATAACCTTTATTTAT+TGG | + | chr8_1:82703536-82703555 | Msa1219790:intron | 20.0% |
!! | ATAGAATTATAAGTTCTTCA+CGG | + | chr8_1:82704346-82704365 | Msa1219790:intron | 20.0% |
!!! | TGTTAGAATATACTTTTTTC+TGG | + | chr8_1:82704980-82704999 | Msa1219790:intron | 20.0% |
!!! | TTCTTTAAACCAAGATTTTT+AGG | + | chr8_1:82705119-82705138 | Msa1219790:intron | 20.0% |
!!! | AGGGAGAAATAAAATATTTT+TGG | + | chr8_1:82705142-82705161 | Msa1219790:intron | 20.0% |
!!! | GAGAAATAAAATATTTTTGG+TGG | + | chr8_1:82705145-82705164 | Msa1219790:intron | 20.0% |
!! | TCGTCATAAATGAAAAAAAA+GGG | - | chr8_1:82705299-82705318 | None:intergenic | 20.0% |
! | TATCAGAATCTGTGAATAAA+TGG | + | chr8_1:82696368-82696387 | Msa1219790:CDS | 25.0% |
! | ATCAGAATCTGTGAATAAAT+GGG | + | chr8_1:82696369-82696388 | Msa1219790:CDS | 25.0% |
!! | AGAAGGTTGAACAATAATTT+TGG | - | chr8_1:82696458-82696477 | None:intergenic | 25.0% |
! | CTAGTAATTAGTATGAAGAA+AGG | - | chr8_1:82696598-82696617 | None:intergenic | 25.0% |
! | CTTTCTTCATACTAATTACT+AGG | + | chr8_1:82696596-82696615 | Msa1219790:intron | 25.0% |
!!! | CTAGGTTGATATTAAGTTTT+TGG | + | chr8_1:82696614-82696633 | Msa1219790:intron | 25.0% |
! | AGATTAATCACTCAATGTAA+CGG | + | chr8_1:82696668-82696687 | Msa1219790:intron | 25.0% |
! | ATGAAGTGACAAATTAGAAA+TGG | - | chr8_1:82696975-82696994 | None:intergenic | 25.0% |
! | AATTGATTGTTGGAGAAAAT+GGG | + | chr8_1:82697048-82697067 | Msa1219790:CDS | 25.0% |
!! | ATCTGTTTTATGTATGTAAC+AGG | + | chr8_1:82697240-82697259 | Msa1219790:intron | 25.0% |
!! | TCTGTTTTATGTATGTAACA+GGG | + | chr8_1:82697241-82697260 | Msa1219790:intron | 25.0% |
! | TCATTATCTCTGCTTAATAA+AGG | - | chr8_1:82697689-82697708 | None:intergenic | 25.0% |
!! | CATTAACAAAGCAAAAGTAT+AGG | - | chr8_1:82697767-82697786 | None:intergenic | 25.0% |
! | CTCTAAATCATACCAAATAA+TGG | - | chr8_1:82697965-82697984 | None:intergenic | 25.0% |
! | TCACTTAACTTTAAGCAATT+TGG | - | chr8_1:82698017-82698036 | None:intergenic | 25.0% |
! | GACATTAGTAGATAAACAAT+TGG | - | chr8_1:82698246-82698265 | None:intergenic | 25.0% |
!!! | GCTATTTTTTCATGGAAAAT+TGG | - | chr8_1:82698359-82698378 | None:intergenic | 25.0% |
!!! | TTGGCTAAAATTTTGTTTTG+CGG | + | chr8_1:82698458-82698477 | Msa1219790:intron | 25.0% |
!!! | CATGAATAAATTTAGCTTTC+TGG | + | chr8_1:82698513-82698532 | Msa1219790:intron | 25.0% |
! | TCTTAGTTAATTGCATGTAT+TGG | + | chr8_1:82698585-82698604 | Msa1219790:intron | 25.0% |
! | CTTAGTTAATTGCATGTATT+GGG | + | chr8_1:82698586-82698605 | Msa1219790:intron | 25.0% |
! | ATTCAAGATTTGATGAGAAA+TGG | + | chr8_1:82698644-82698663 | Msa1219790:CDS | 25.0% |
! | TTCTACAATGGAATAAAACT+TGG | + | chr8_1:82698825-82698844 | Msa1219790:intron | 25.0% |
!! | GCATTTTGTAACCTAATATA+TGG | - | chr8_1:82699110-82699129 | None:intergenic | 25.0% |
!! | TTGGCTCAATTTTTATGAAA+GGG | - | chr8_1:82699173-82699192 | None:intergenic | 25.0% |
!!! | ATTGGCTCAATTTTTATGAA+AGG | - | chr8_1:82699174-82699193 | None:intergenic | 25.0% |
!! | AACTGACTTTGTTATATGAT+TGG | - | chr8_1:82699192-82699211 | None:intergenic | 25.0% |
!! | ACTGTCATAGTTGATATATT+AGG | - | chr8_1:82699320-82699339 | None:intergenic | 25.0% |
! | AAGTTCACTAATCACTAATT+GGG | - | chr8_1:82699428-82699447 | None:intergenic | 25.0% |
! | AAAGTTCACTAATCACTAAT+TGG | - | chr8_1:82699429-82699448 | None:intergenic | 25.0% |
! | TGTTAGATATGATGCAATAA+CGG | + | chr8_1:82699738-82699757 | Msa1219790:intron | 25.0% |
! | TATAATCATATAAGGAGGTT+AGG | - | chr8_1:82700045-82700064 | None:intergenic | 25.0% |
! | TGGTATATAATCATATAAGG+AGG | - | chr8_1:82700050-82700069 | None:intergenic | 25.0% |
! | ACCAACAAATTGAAAGAAAA+GGG | - | chr8_1:82700165-82700184 | None:intergenic | 25.0% |
! | AACCAACAAATTGAAAGAAA+AGG | - | chr8_1:82700166-82700185 | None:intergenic | 25.0% |
!!! | TTCTTTCAATTTGTTGGTTT+TGG | + | chr8_1:82700167-82700186 | Msa1219790:intron | 25.0% |
! | AAATAAGCGCTATAAAAAAG+AGG | - | chr8_1:82700195-82700214 | None:intergenic | 25.0% |
! | TTACAATAGCCTCTTAAAAT+GGG | + | chr8_1:82700221-82700240 | Msa1219790:CDS | 25.0% |
! | AAGATTAACTATAAAACAGC+AGG | - | chr8_1:82700354-82700373 | None:intergenic | 25.0% |
! | TGATCAATTTCTGATAAATG+AGG | + | chr8_1:82700427-82700446 | Msa1219790:CDS | 25.0% |
! | AAACTTGAATGTTTACTTGT+GGG | + | chr8_1:82700564-82700583 | Msa1219790:intron | 25.0% |
!!! | CTTGAGTTTTTTGAACAAAT+AGG | + | chr8_1:82700647-82700666 | Msa1219790:intron | 25.0% |
! | GTATGTTATTCAATCACATT+CGG | + | chr8_1:82700851-82700870 | Msa1219790:intron | 25.0% |
! | ACTGATCTAATATCAAATCT+AGG | - | chr8_1:82701515-82701534 | None:intergenic | 25.0% |
!! | CGTCTTTTCAAAATATTTTC+TGG | + | chr8_1:82701627-82701646 | Msa1219790:intron | 25.0% |
!! | TGATATCTTGATTGTTTCTT+CGG | + | chr8_1:82701650-82701669 | Msa1219790:intron | 25.0% |
! | CTTCAAATCTTAAAAGAGAT+AGG | - | chr8_1:82702057-82702076 | None:intergenic | 25.0% |
!!! | ATATTTTTGGTGAAATCTCT+AGG | + | chr8_1:82702143-82702162 | Msa1219790:intron | 25.0% |
!!! | TATTTTTGGTGAAATCTCTA+GGG | + | chr8_1:82702144-82702163 | Msa1219790:intron | 25.0% |
! | ATAGTCTATAATAGTGCATT+TGG | + | chr8_1:82702413-82702432 | Msa1219790:intron | 25.0% |
! | TGGATCATCAATCAATTAAA+AGG | - | chr8_1:82702774-82702793 | None:intergenic | 25.0% |
!!! | TTTATATGCTAATGGATTGT+TGG | - | chr8_1:82702900-82702919 | None:intergenic | 25.0% |
! | ATCCATTAGCATATAAATTC+AGG | + | chr8_1:82702903-82702922 | Msa1219790:CDS | 25.0% |
! | TACCTGAATTTATATGCTAA+TGG | - | chr8_1:82702908-82702927 | None:intergenic | 25.0% |
!!! | TTCTAAAGTTCACTAACTTT+TGG | + | chr8_1:82702967-82702986 | Msa1219790:intron | 25.0% |
!! | ATTCTCTATTCCTTCTTTTA+AGG | + | chr8_1:82703351-82703370 | Msa1219790:intron | 25.0% |
!! | TTCTCTATTCCTTCTTTTAA+GGG | + | chr8_1:82703352-82703371 | Msa1219790:intron | 25.0% |
!! | ATAACCTTTATTTATTGGAC+AGG | + | chr8_1:82703541-82703560 | Msa1219790:intron | 25.0% |
! | TATGGAGATTTATATGGAAT+AGG | + | chr8_1:82703655-82703674 | Msa1219790:CDS | 25.0% |
! | TATAAATCATGCCTTCATAA+CGG | - | chr8_1:82703714-82703733 | None:intergenic | 25.0% |
!!! | GATTAAACAAGTTTTAGAGA+AGG | - | chr8_1:82703753-82703772 | None:intergenic | 25.0% |
! | AATCTACATCAGTCTATATT+TGG | + | chr8_1:82703769-82703788 | Msa1219790:intron | 25.0% |
!! | TATTCTCTCATGTAGATTTT+TGG | + | chr8_1:82704202-82704221 | Msa1219790:intron | 25.0% |
!! | ATTCTCTCATGTAGATTTTT+GGG | + | chr8_1:82704203-82704222 | Msa1219790:intron | 25.0% |
!! | TTTGCAATATTTAGTTCCTA+AGG | - | chr8_1:82704381-82704400 | None:intergenic | 25.0% |
! | TATACAATAGACAGAAATGA+AGG | - | chr8_1:82704798-82704817 | None:intergenic | 25.0% |
!! | ATTCACAAACAGTTTTTACT+TGG | - | chr8_1:82704830-82704849 | None:intergenic | 25.0% |
! | AAAAACTGTTTGTGAATTTG+TGG | + | chr8_1:82704833-82704852 | Msa1219790:intron | 25.0% |
!! | AGTAATGATTTGTAATTCTG+TGG | - | chr8_1:82705067-82705086 | None:intergenic | 25.0% |
!!! | TTTAAACCAAGATTTTTAGG+AGG | + | chr8_1:82705122-82705141 | Msa1219790:intron | 25.0% |
!!! | TTAAACCAAGATTTTTAGGA+GGG | + | chr8_1:82705123-82705142 | Msa1219790:intron | 25.0% |
! | CGTCATAAATGAAAAAAAAG+GGG | - | chr8_1:82705298-82705317 | None:intergenic | 25.0% |
! | GTCGTCATAAATGAAAAAAA+AGG | - | chr8_1:82705300-82705319 | None:intergenic | 25.0% |
!! | TTTTGCAAATGCTTATTTGT+GGG | + | chr8_1:82705483-82705502 | Msa1219790:intron | 25.0% |
!!! | GTAATTTTTATGTTTGAAGC+TGG | + | chr8_1:82705570-82705589 | Msa1219790:exon | 25.0% |
TGATGAATTCTCTTAGTAGA+AGG | - | chr8_1:82696475-82696494 | None:intergenic | 30.0% | |
GTAATTAGTATGAAGAAAGG+AGG | - | chr8_1:82696595-82696614 | None:intergenic | 30.0% | |
CAAAAACAATACGTTGAAAG+AGG | - | chr8_1:82696714-82696733 | None:intergenic | 30.0% | |
GAATTGATTGTTGGAGAAAA+TGG | + | chr8_1:82697047-82697066 | Msa1219790:CDS | 30.0% | |
! | AATTCTATTGAAGGCATATC+CGG | - | chr8_1:82697605-82697624 | None:intergenic | 30.0% |
TATGCCTTCAATAGAATTGT+CGG | + | chr8_1:82697607-82697626 | Msa1219790:intron | 30.0% | |
ACCATTAGTTCATGAATACA+GGG | - | chr8_1:82697733-82697752 | None:intergenic | 30.0% | |
AACCATTAGTTCATGAATAC+AGG | - | chr8_1:82697734-82697753 | None:intergenic | 30.0% | |
TGTAGTTCACTTAGTTTAGA+TGG | - | chr8_1:82697890-82697909 | None:intergenic | 30.0% | |
ACTAAGTGAACTACATAAGA+TGG | + | chr8_1:82697895-82697914 | Msa1219790:CDS | 30.0% | |
TAACTTTAAGCAATTTGGCA+TGG | - | chr8_1:82698012-82698031 | None:intergenic | 30.0% | |
GTTAAGTGATTCGAAATAGA+AGG | + | chr8_1:82698028-82698047 | Msa1219790:intron | 30.0% | |
ACTTTGTCAAACACTTTCAT+GGG | - | chr8_1:82698189-82698208 | None:intergenic | 30.0% | |
ATTAGATACAACTTAGCAAG+AGG | - | chr8_1:82698277-82698296 | None:intergenic | 30.0% | |
AAATTGGAGTGTAATGTTCA+GGG | - | chr8_1:82698343-82698362 | None:intergenic | 30.0% | |
AAAATTGGAGTGTAATGTTC+AGG | - | chr8_1:82698344-82698363 | None:intergenic | 30.0% | |
!!! | TGTATGGTGCTATTTTTTCA+TGG | - | chr8_1:82698367-82698386 | None:intergenic | 30.0% |
ATCTGCTTATAGCTTAACAA+CGG | - | chr8_1:82698626-82698645 | None:intergenic | 30.0% | |
! | GCAGATATAACTTGTGATAT+AGG | + | chr8_1:82698686-82698705 | Msa1219790:CDS | 30.0% |
! | GATATAACTTGTGATATAGG+TGG | + | chr8_1:82698689-82698708 | Msa1219790:CDS | 30.0% |
ACATTTGCATGTGTAAGAAA+GGG | + | chr8_1:82699004-82699023 | Msa1219790:intron | 30.0% | |
!! | TCAAGAAGTGTCCATATATT+AGG | + | chr8_1:82699096-82699115 | Msa1219790:intron | 30.0% |
AAATGCACCAACATAAATGT+AGG | + | chr8_1:82699124-82699143 | Msa1219790:intron | 30.0% | |
TATAGAGCCTACATTTATGT+TGG | - | chr8_1:82699134-82699153 | None:intergenic | 30.0% | |
! | AAGACTGAATAGTCTCATTT+TGG | + | chr8_1:82699271-82699290 | Msa1219790:intron | 30.0% |
ACTATGACAGTCTTTATATC+AGG | + | chr8_1:82699329-82699348 | Msa1219790:intron | 30.0% | |
!! | GAAATCTAATTTGGTTTGCT+AGG | - | chr8_1:82699370-82699389 | None:intergenic | 30.0% |
AGTTCACTAATCACTAATTG+GGG | - | chr8_1:82699427-82699446 | None:intergenic | 30.0% | |
! | GTGATTAGTGAACTTTTGTT+AGG | + | chr8_1:82699433-82699452 | Msa1219790:intron | 30.0% |
TGATTAGAGTAAATCCACTT+AGG | + | chr8_1:82699458-82699477 | Msa1219790:intron | 30.0% | |
!! | ATTCAAGTTGTATTCTCGTT+TGG | + | chr8_1:82699487-82699506 | Msa1219790:intron | 30.0% |
!! | TTCAAGTTGTATTCTCGTTT+GGG | + | chr8_1:82699488-82699507 | Msa1219790:intron | 30.0% |
AAGAGAAAGATACAAAGACA+GGG | - | chr8_1:82699540-82699559 | None:intergenic | 30.0% | |
AAAGAGAAAGATACAAAGAC+AGG | - | chr8_1:82699541-82699560 | None:intergenic | 30.0% | |
AGCCAAATTTGTGACAAATT+GGG | - | chr8_1:82699957-82699976 | None:intergenic | 30.0% | |
AAGCCAAATTTGTGACAAAT+TGG | - | chr8_1:82699958-82699977 | None:intergenic | 30.0% | |
GCGTGGTATATAATCATATA+AGG | - | chr8_1:82700053-82700072 | None:intergenic | 30.0% | |
! | ACCCTTTTCTTTCAATTTGT+TGG | + | chr8_1:82700161-82700180 | Msa1219790:intron | 30.0% |
TTTAAGAGGCTATTGTAAGT+GGG | - | chr8_1:82700219-82700238 | None:intergenic | 30.0% | |
!! | TTTTAAGAGGCTATTGTAAG+TGG | - | chr8_1:82700220-82700239 | None:intergenic | 30.0% |
CTTACAATAGCCTCTTAAAA+TGG | + | chr8_1:82700220-82700239 | Msa1219790:CDS | 30.0% | |
TGCAGCTTCAATAATATCTA+GGG | - | chr8_1:82700453-82700472 | None:intergenic | 30.0% | |
CAAACTTGAATGTTTACTTG+TGG | + | chr8_1:82700563-82700582 | Msa1219790:intron | 30.0% | |
CTATTATCATGTATTCCTTC+AGG | - | chr8_1:82700770-82700789 | None:intergenic | 30.0% | |
CTGAAGGAATACATGATAAT+AGG | + | chr8_1:82700768-82700787 | Msa1219790:intron | 30.0% | |
CCAATAAGAAATTATGAGTG+AGG | - | chr8_1:82700806-82700825 | None:intergenic | 30.0% | |
CCTCACTCATAATTTCTTAT+TGG | + | chr8_1:82700803-82700822 | Msa1219790:intron | 30.0% | |
AAATTGCAGTGTATTCAGAA+TGG | - | chr8_1:82700829-82700848 | None:intergenic | 30.0% | |
AATTCAAGCATGGTTATTGT+GGG | + | chr8_1:82700915-82700934 | Msa1219790:intron | 30.0% | |
AGTAAAATTTCACTTACGCT+TGG | + | chr8_1:82701198-82701217 | Msa1219790:CDS | 30.0% | |
CTTGGTAAAGTTCATGAAAA+CGG | + | chr8_1:82701216-82701235 | Msa1219790:CDS | 30.0% | |
! | ATATCAAATCTAGGATCCTT+AGG | - | chr8_1:82701506-82701525 | None:intergenic | 30.0% |
TGAAATGCTCTTAAAAAGAC+TGG | - | chr8_1:82701597-82701616 | None:intergenic | 30.0% | |
!!! | TCTTTTTAAGAGCATTTCAC+AGG | + | chr8_1:82701598-82701617 | Msa1219790:CDS | 30.0% |
TCAGCATTAACACATGATAA+GGG | - | chr8_1:82701703-82701722 | None:intergenic | 30.0% | |
ATCAGCATTAACACATGATA+AGG | - | chr8_1:82701704-82701723 | None:intergenic | 30.0% | |
AAAAAACTATGCTGGAAGAT+GGG | - | chr8_1:82701734-82701753 | None:intergenic | 30.0% | |
AAAAAAACTATGCTGGAAGA+TGG | - | chr8_1:82701735-82701754 | None:intergenic | 30.0% | |
! | TTTTTGTTCTCGTATTTTGC+AGG | + | chr8_1:82701804-82701823 | Msa1219790:intron | 30.0% |
CTAGAATAGATTGAAGACTA+TGG | + | chr8_1:82701999-82702018 | Msa1219790:intron | 30.0% | |
TAGATTGAAGACTATGGTAA+TGG | + | chr8_1:82702005-82702024 | Msa1219790:intron | 30.0% | |
AATCAGAGAACTAAAGAAGT+GGG | - | chr8_1:82702111-82702130 | None:intergenic | 30.0% | |
AAATCAGAGAACTAAAGAAG+TGG | - | chr8_1:82702112-82702131 | None:intergenic | 30.0% | |
!!! | ATTTTTGGTGAAATCTCTAG+GGG | + | chr8_1:82702145-82702164 | Msa1219790:intron | 30.0% |
TATAACAATTCTTGGTGAGA+TGG | + | chr8_1:82702316-82702335 | Msa1219790:CDS | 30.0% | |
ATAACAATTCTTGGTGAGAT+GGG | + | chr8_1:82702317-82702336 | Msa1219790:CDS | 30.0% | |
ATATCAGAATAGGTCATACT+AGG | - | chr8_1:82702366-82702385 | None:intergenic | 30.0% | |
! | TATAGACTATTTTATGCTCC+TGG | - | chr8_1:82702403-82702422 | None:intergenic | 30.0% |
AGCATATAAATTCAGGTACT+TGG | + | chr8_1:82702910-82702929 | Msa1219790:intron | 30.0% | |
ATGTTAAGACCCTTAAAAGA+AGG | - | chr8_1:82703364-82703383 | None:intergenic | 30.0% | |
CTTCAAGAAAATGTTACACA+TGG | - | chr8_1:82703503-82703522 | None:intergenic | 30.0% | |
GTTTCCTGTCCAATAAATAA+AGG | - | chr8_1:82703548-82703567 | None:intergenic | 30.0% | |
ATGATTCAGCTAAAAGACTA+AGG | + | chr8_1:82703575-82703594 | Msa1219790:CDS | 30.0% | |
TAAATTAAAGAGTTGCGGTT+TGG | - | chr8_1:82703637-82703656 | None:intergenic | 30.0% | |
! | AACCGCAACTCTTTAATTTA+TGG | + | chr8_1:82703637-82703656 | Msa1219790:CDS | 30.0% |
CTCCATAAATTAAAGAGTTG+CGG | - | chr8_1:82703642-82703661 | None:intergenic | 30.0% | |
!!! | TTTTTAGCTACTCCATGTAT+AGG | + | chr8_1:82703882-82703901 | Msa1219790:intron | 30.0% |
!! | TTTTAGCTACTCCATGTATA+GGG | + | chr8_1:82703883-82703902 | Msa1219790:intron | 30.0% |
!! | AACATGAATTTTCTGAAGGT+TGG | - | chr8_1:82703990-82704009 | None:intergenic | 30.0% |
! | GTCAAACATGAATTTTCTGA+AGG | - | chr8_1:82703994-82704013 | None:intergenic | 30.0% |
!!! | TGGAAAATCACTGTTTTAAC+CGG | + | chr8_1:82704175-82704194 | Msa1219790:intron | 30.0% |
! | GTAATATACCTTTTCTGTGT+TGG | - | chr8_1:82704315-82704334 | None:intergenic | 30.0% |
! | AGTTGTTTCATCGGTATTTA+AGG | - | chr8_1:82704522-82704541 | None:intergenic | 30.0% |
! | CTGCAAATAAGTTGTTTCAT+CGG | - | chr8_1:82704531-82704550 | None:intergenic | 30.0% |
! | CTTATATCTGATTTGTAAGC+AGG | + | chr8_1:82704603-82704622 | Msa1219790:intron | 30.0% |
ACAAACAAAATTCAGACAAG+AGG | + | chr8_1:82704885-82704904 | Msa1219790:CDS | 30.0% | |
CAAAAAATGACTAGCATACT+TGG | + | chr8_1:82705037-82705056 | Msa1219790:intron | 30.0% | |
! | ATGATTTGTAATTCTGTGGT+TGG | - | chr8_1:82705063-82705082 | None:intergenic | 30.0% |
TAACAACTCAAGACTATTCT+CGG | - | chr8_1:82705400-82705419 | None:intergenic | 30.0% | |
! | CTTTTGCAAATGCTTATTTG+TGG | + | chr8_1:82705482-82705501 | Msa1219790:intron | 30.0% |
CTGGATATTATACAAGCTTA+TGG | + | chr8_1:82705523-82705542 | Msa1219790:CDS | 30.0% | |
TGACAAATGAAAAAGATCCT+AGG | - | chr8_1:82705772-82705791 | None:intergenic | 30.0% | |
TATTCACAAGTCACAACACA+AGG | + | chr8_1:82696184-82696203 | Msa1219790:five_prime_UTR | 35.0% | |
ACAACACAAGGATTCATTTC+TGG | + | chr8_1:82696196-82696215 | Msa1219790:five_prime_UTR | 35.0% | |
AAGAACACGTGATTCTTACA+AGG | - | chr8_1:82696237-82696256 | None:intergenic | 35.0% | |
! | TTTGAGGTTTGAGAAGTAAG+AGG | + | chr8_1:82696314-82696333 | Msa1219790:five_prime_UTR | 35.0% |
AGAAGTAAGAGGAAGATGTT+TGG | + | chr8_1:82696325-82696344 | Msa1219790:exon | 35.0% | |
GAAGTAAGAGGAAGATGTTT+GGG | + | chr8_1:82696326-82696345 | Msa1219790:exon | 35.0% | |
TGTGCTAGATTACTTCATCA+TGG | + | chr8_1:82696421-82696440 | Msa1219790:CDS | 35.0% | |
AGATTACTTCATCATGGAAC+TGG | + | chr8_1:82696427-82696446 | Msa1219790:CDS | 35.0% | |
! | AAGAAGGCATAAGCTCTATT+TGG | - | chr8_1:82696848-82696867 | None:intergenic | 35.0% |
TTTGTGAGTATGGGAAAAGA+AGG | - | chr8_1:82696864-82696883 | None:intergenic | 35.0% | |
TTTCTGTGCTTTGTGAGTAT+GGG | - | chr8_1:82696873-82696892 | None:intergenic | 35.0% | |
GGGAAAAGATTACTTGCATT+TGG | + | chr8_1:82697068-82697087 | Msa1219790:CDS | 35.0% | |
! | CTTGCATTTGGAAATTTTGC+TGG | + | chr8_1:82697080-82697099 | Msa1219790:CDS | 35.0% |
! | ATTGATTTCTTGCGTGGATT+GGG | + | chr8_1:82697116-82697135 | Msa1219790:CDS | 35.0% |
ATCATACATGTATCCTTCCT+TGG | + | chr8_1:82697308-82697327 | Msa1219790:CDS | 35.0% | |
GAATGTAACTACTACATGCA+TGG | + | chr8_1:82697543-82697562 | Msa1219790:intron | 35.0% | |
!!! | TACATGCATGGATTTTTTGC+TGG | + | chr8_1:82697555-82697574 | Msa1219790:intron | 35.0% |
AACACCGACAATTCTATTGA+AGG | - | chr8_1:82697614-82697633 | None:intergenic | 35.0% | |
TCCCTGTATTCATGAACTAA+TGG | + | chr8_1:82697729-82697748 | Msa1219790:intron | 35.0% | |
! | AGATGGATCCACAAAAGTAT+GGG | - | chr8_1:82697873-82697892 | None:intergenic | 35.0% |
TAGATGGATCCACAAAAGTA+TGG | - | chr8_1:82697874-82697893 | None:intergenic | 35.0% | |
GTAAATATATGGCGAAGTTC+AGG | - | chr8_1:82698064-82698083 | None:intergenic | 35.0% | |
AACAGGAAACTAATCAAGCA+AGG | + | chr8_1:82698091-82698110 | Msa1219790:intron | 35.0% | |
TCACAACACAACCATAAACT+TGG | - | chr8_1:82698137-82698156 | None:intergenic | 35.0% | |
AACACTTTCATGGGATCTTT+GGG | - | chr8_1:82698180-82698199 | None:intergenic | 35.0% | |
AAACACTTTCATGGGATCTT+TGG | - | chr8_1:82698181-82698200 | None:intergenic | 35.0% | |
CACTTTGTCAAACACTTTCA+TGG | - | chr8_1:82698190-82698209 | None:intergenic | 35.0% | |
ATTGGAGATTCCAAAACTCA+AGG | - | chr8_1:82698228-82698247 | None:intergenic | 35.0% | |
TCTAATATGCTAACCTGATG+TGG | + | chr8_1:82698291-82698310 | Msa1219790:intron | 35.0% | |
! | TAACCTGATGTGGTTATTTC+AGG | + | chr8_1:82698301-82698320 | Msa1219790:intron | 35.0% |
ATTGCATGTATTGGGAGAAA+AGG | + | chr8_1:82698594-82698613 | Msa1219790:CDS | 35.0% | |
ATATCTGCTATTCCAACAAG+TGG | - | chr8_1:82698674-82698693 | None:intergenic | 35.0% | |
GTGAATCAATTGACGTAGTT+CGG | - | chr8_1:82698733-82698752 | None:intergenic | 35.0% | |
TATGGTGTATACCTGAAGAA+GGG | - | chr8_1:82698755-82698774 | None:intergenic | 35.0% | |
ATATGGTGTATACCTGAAGA+AGG | - | chr8_1:82698756-82698775 | None:intergenic | 35.0% | |
ATACACCATATCCACTTGTT+TGG | + | chr8_1:82698765-82698784 | Msa1219790:intron | 35.0% | |
TAATAACCTCTCCAAACAAG+TGG | - | chr8_1:82698779-82698798 | None:intergenic | 35.0% | |
TTACACATGCAAATGTCTGT+AGG | - | chr8_1:82699000-82699019 | None:intergenic | 35.0% | |
GACATTTGCATGTGTAAGAA+AGG | + | chr8_1:82699003-82699022 | Msa1219790:intron | 35.0% | |
CATTTGCATGTGTAAGAAAG+GGG | + | chr8_1:82699005-82699024 | Msa1219790:intron | 35.0% | |
! | GCTCAATTTTTATGAAAGGG+TGG | - | chr8_1:82699170-82699189 | None:intergenic | 35.0% |
ACTTGAATAATCAGCCTAAG+TGG | - | chr8_1:82699475-82699494 | None:intergenic | 35.0% | |
AGAGAAAGATACAAAGACAG+GGG | - | chr8_1:82699539-82699558 | None:intergenic | 35.0% | |
TCCAACAGAATTTGCAAAAG+AGG | + | chr8_1:82699819-82699838 | Msa1219790:intron | 35.0% | |
! | ACCTCTTTTGCAAATTCTGT+TGG | - | chr8_1:82699823-82699842 | None:intergenic | 35.0% |
TAAGTGTCTTGTACATCCAT+TGG | + | chr8_1:82699842-82699861 | Msa1219790:CDS | 35.0% | |
ACATCCATTGGATAAGAGAA+TGG | + | chr8_1:82699854-82699873 | Msa1219790:CDS | 35.0% | |
ATAGCCATTCTCTTATCCAA+TGG | - | chr8_1:82699861-82699880 | None:intergenic | 35.0% | |
GATAAGAGAATGGCTATAAC+AGG | + | chr8_1:82699864-82699883 | Msa1219790:CDS | 35.0% | |
GTCCCAATTTGTCACAAATT+TGG | + | chr8_1:82699952-82699971 | Msa1219790:intron | 35.0% | |
CAAGAGCAAATACAAGACAT+CGG | + | chr8_1:82700287-82700306 | Msa1219790:CDS | 35.0% | |
CTGCAGCTTCAATAATATCT+AGG | - | chr8_1:82700454-82700473 | None:intergenic | 35.0% | |
CTAGATATTATTGAAGCTGC+AGG | + | chr8_1:82700452-82700471 | Msa1219790:CDS | 35.0% | |
TCATGTATTCCTTCAGGTAT+GGG | - | chr8_1:82700764-82700783 | None:intergenic | 35.0% | |
ATCATGTATTCCTTCAGGTA+TGG | - | chr8_1:82700765-82700784 | None:intergenic | 35.0% | |
CACAATAACCATGCTTGAAT+TGG | - | chr8_1:82700916-82700935 | None:intergenic | 35.0% | |
CAATTCAAGCATGGTTATTG+TGG | + | chr8_1:82700914-82700933 | Msa1219790:intron | 35.0% | |
! | CAACAAGCTATGTTTTCAAC+AGG | + | chr8_1:82701077-82701096 | Msa1219790:intron | 35.0% |
! | AAGCTATGTTTTCAACAGGT+TGG | + | chr8_1:82701081-82701100 | Msa1219790:intron | 35.0% |
TAAAGTTCATGAAAACGGCA+TGG | + | chr8_1:82701221-82701240 | Msa1219790:CDS | 35.0% | |
GGAATCTGATCCAAAAAAGA+AGG | + | chr8_1:82701248-82701267 | Msa1219790:CDS | 35.0% | |
!!! | AAAACTGCAGCCTTCTTTTT+TGG | - | chr8_1:82701261-82701280 | None:intergenic | 35.0% |
GCTCAAATGCTATCATCATT+TGG | + | chr8_1:82701315-82701334 | Msa1219790:CDS | 35.0% | |
! | GCAGAACTAGTATTTTCCTA+AGG | + | chr8_1:82701487-82701506 | Msa1219790:intron | 35.0% |
AGCTGAATTCCAGTTACATT+TGG | - | chr8_1:82701557-82701576 | None:intergenic | 35.0% | |
CACATGATAAGGGTTCAATA+AGG | - | chr8_1:82701693-82701712 | None:intergenic | 35.0% | |
AAAAACTATGCTGGAAGATG+GGG | - | chr8_1:82701733-82701752 | None:intergenic | 35.0% | |
TACGATAATGTGACAACTAG+GGG | - | chr8_1:82701854-82701873 | None:intergenic | 35.0% | |
CTACGATAATGTGACAACTA+GGG | - | chr8_1:82701855-82701874 | None:intergenic | 35.0% | |
!! | TTTAGCCTTATCATCTAGCA+TGG | - | chr8_1:82702288-82702307 | None:intergenic | 35.0% |
GATGCTGGTATAACAATTCT+TGG | + | chr8_1:82702308-82702327 | Msa1219790:CDS | 35.0% | |
TGCATGTGCTTATATTCTAG+CGG | + | chr8_1:82702530-82702549 | Msa1219790:intron | 35.0% | |
! | TTATTTTCATCCCGACACAT+TGG | + | chr8_1:82702680-82702699 | Msa1219790:intron | 35.0% |
TTATTAGAAGACCTGTTGGT+TGG | - | chr8_1:82702751-82702770 | None:intergenic | 35.0% | |
AAGGTTATTAGAAGACCTGT+TGG | - | chr8_1:82702755-82702774 | None:intergenic | 35.0% | |
GCCATAAATGTAACAAGTAC+CGG | - | chr8_1:82703004-82703023 | None:intergenic | 35.0% | |
!!! | CACAAGTGATGCTTTTTCAA+GGG | - | chr8_1:82703048-82703067 | None:intergenic | 35.0% |
CAACAAGATGAAACAGTAAC+AGG | - | chr8_1:82703152-82703171 | None:intergenic | 35.0% | |
CTGTTACTGTTTCATCTTGT+TGG | + | chr8_1:82703150-82703169 | Msa1219790:intron | 35.0% | |
TCTTGTTGGCATTGCTATAA+TGG | + | chr8_1:82703164-82703183 | Msa1219790:intron | 35.0% | |
CATTGCTATAATGGCTCATT+TGG | + | chr8_1:82703173-82703192 | Msa1219790:intron | 35.0% | |
AGGATTCCAGCTGAAATAAT+TGG | - | chr8_1:82703202-82703221 | None:intergenic | 35.0% | |
GGCGAAACTTTACATATTGA+TGG | + | chr8_1:82703270-82703289 | Msa1219790:CDS | 35.0% | |
TTTACCGTCAATAACATGCA+CGG | + | chr8_1:82703408-82703427 | Msa1219790:intron | 35.0% | |
AATTCCGTGCATGTTATTGA+CGG | - | chr8_1:82703415-82703434 | None:intergenic | 35.0% | |
GGAATGAGACTCATTCAATA+TGG | - | chr8_1:82703482-82703501 | None:intergenic | 35.0% | |
ATACTCAAACACACAAAACC+TGG | - | chr8_1:82703837-82703856 | None:intergenic | 35.0% | |
ATCTCACTAAACCCTATACA+TGG | - | chr8_1:82703897-82703916 | None:intergenic | 35.0% | |
TATAGGGTTTAGTGAGATCA+TGG | + | chr8_1:82703899-82703918 | Msa1219790:intron | 35.0% | |
TCGGAAAGGATATTAACACT+AGG | + | chr8_1:82704071-82704090 | Msa1219790:CDS | 35.0% | |
GACAGCAAAAACAATCATGT+AGG | + | chr8_1:82704124-82704143 | Msa1219790:intron | 35.0% | |
!! | CATACTAAGAGAGTGTTGAA+TGG | - | chr8_1:82704150-82704169 | None:intergenic | 35.0% |
CATTCAACACTCTCTTAGTA+TGG | + | chr8_1:82704148-82704167 | Msa1219790:intron | 35.0% | |
CACTCTCTTAGTATGGTTAT+TGG | + | chr8_1:82704155-82704174 | Msa1219790:intron | 35.0% | |
CGATGAAACAACTTATTTGC+AGG | + | chr8_1:82704529-82704548 | Msa1219790:intron | 35.0% | |
TTATTTGCAGGAATGTGAAG+AGG | + | chr8_1:82704541-82704560 | Msa1219790:intron | 35.0% | |
! | TCTGATTTGTAAGCAGGATA+TGG | + | chr8_1:82704609-82704628 | Msa1219790:intron | 35.0% |
!! | TCTCTGTAATTTTGCTGTCT+GGG | - | chr8_1:82704666-82704685 | None:intergenic | 35.0% |
!! | TTCTCTGTAATTTTGCTGTC+TGG | - | chr8_1:82704667-82704686 | None:intergenic | 35.0% |
! | AGAGCTACTTTGCTTGAATT+CGG | + | chr8_1:82704691-82704710 | Msa1219790:CDS | 35.0% |
GAATTCGGGAAAACTATTGA+TGG | + | chr8_1:82704706-82704725 | Msa1219790:CDS | 35.0% | |
AAATATAACATGCAGTCACC+TGG | - | chr8_1:82704945-82704964 | None:intergenic | 35.0% | |
! | TGGCATGCACATTTGTTAAA+AGG | + | chr8_1:82705000-82705019 | Msa1219790:intron | 35.0% |
!!! | GTATGCTAGTCATTTTTTGC+TGG | - | chr8_1:82705036-82705055 | None:intergenic | 35.0% |
TTTCTCCCTCCTAAAAATCT+TGG | - | chr8_1:82705131-82705150 | None:intergenic | 35.0% | |
GAATAACACGCAGAAAACAA+TGG | - | chr8_1:82705190-82705209 | None:intergenic | 35.0% | |
!! | TCTGCGTGTTATTCTCTTTT+AGG | + | chr8_1:82705196-82705215 | Msa1219790:intron | 35.0% |
! | AAATGCTTATTTGTGGGTTG+TGG | + | chr8_1:82705489-82705508 | Msa1219790:intron | 35.0% |
ACTCAAAAGAGGTTTGGATT+TGG | - | chr8_1:82705749-82705768 | None:intergenic | 35.0% | |
AAGAGGAAGATGTTTGGGAA+CGG | + | chr8_1:82696331-82696350 | Msa1219790:exon | 40.0% | |
AGTAATCTAGCACAGTGTGA+TGG | - | chr8_1:82696415-82696434 | None:intergenic | 40.0% | |
GATGCTCTCTATGAAGAAGT+TGG | + | chr8_1:82696496-82696515 | Msa1219790:CDS | 40.0% | |
!! | TTTTGTTGTACGCACTGATC+AGG | + | chr8_1:82696729-82696748 | Msa1219790:intron | 40.0% |
CTTTCTGTGCTTTGTGAGTA+TGG | - | chr8_1:82696874-82696893 | None:intergenic | 40.0% | |
GAAAGAAAACATGCCTTTGC+TGG | + | chr8_1:82696889-82696908 | Msa1219790:CDS | 40.0% | |
AAACATGCCTTTGCTGGATA+AGG | + | chr8_1:82696895-82696914 | Msa1219790:CDS | 40.0% | |
CTCAGCTAGAATCTACAACA+AGG | - | chr8_1:82697006-82697025 | None:intergenic | 40.0% | |
! | GGAATGATTGATTTCTTGCG+TGG | + | chr8_1:82697110-82697129 | Msa1219790:CDS | 40.0% |
! | GATTGATTTCTTGCGTGGAT+TGG | + | chr8_1:82697115-82697134 | Msa1219790:CDS | 40.0% |
! | GTAACAGGGTATCTAAGTCT+TGG | + | chr8_1:82697255-82697274 | Msa1219790:intron | 40.0% |
! | TCAACACCTTTTCTGTCACT+TGG | + | chr8_1:82697282-82697301 | Msa1219790:CDS | 40.0% |
GATGATCCAAGTGACAGAAA+AGG | - | chr8_1:82697291-82697310 | None:intergenic | 40.0% | |
TGGTGAAGAAATTGCAACTC+AGG | + | chr8_1:82697359-82697378 | Msa1219790:CDS | 40.0% | |
GGTGAAGAAATTGCAACTCA+GGG | + | chr8_1:82697360-82697379 | Msa1219790:CDS | 40.0% | |
CCAGTAAAGACAAAAACGAG+AGG | - | chr8_1:82697405-82697424 | None:intergenic | 40.0% | |
!! | CCTCTCGTTTTTGTCTTTAC+TGG | + | chr8_1:82697402-82697421 | Msa1219790:intron | 40.0% |
!! | CGTTTTTGTCTTTACTGGCT+CGG | + | chr8_1:82697407-82697426 | Msa1219790:intron | 40.0% |
!!! | GTTTTTGTCTTTACTGGCTC+GGG | + | chr8_1:82697408-82697427 | Msa1219790:intron | 40.0% |
TTGTCAATGCTTCGTCTACA+AGG | - | chr8_1:82697460-82697479 | None:intergenic | 40.0% | |
!! | TCCTTTCTTGTAGTTTGCTC+TGG | + | chr8_1:82697821-82697840 | Msa1219790:intron | 40.0% |
ACCAGAGCAAACTACAAGAA+AGG | - | chr8_1:82697825-82697844 | None:intergenic | 40.0% | |
! | GATGGATCCACAAAAGTATG+GGG | - | chr8_1:82697872-82697891 | None:intergenic | 40.0% |
GAAACTAATCAAGCAAGGCA+TGG | + | chr8_1:82698096-82698115 | Msa1219790:CDS | 40.0% | |
TGTTGTGATAGCTCAAGACA+TGG | + | chr8_1:82698149-82698168 | Msa1219790:CDS | 40.0% | |
CTACCTGAAATAACCACATC+AGG | - | chr8_1:82698307-82698326 | None:intergenic | 40.0% | |
CTACCAATTACGGATGTGTA+TGG | - | chr8_1:82698383-82698402 | None:intergenic | 40.0% | |
CATACACATCCGTAATTGGT+AGG | + | chr8_1:82698381-82698400 | Msa1219790:intron | 40.0% | |
CCGATATCACCTACCAATTA+CGG | - | chr8_1:82698393-82698412 | None:intergenic | 40.0% | |
CCGTAATTGGTAGGTGATAT+CGG | + | chr8_1:82698390-82698409 | Msa1219790:intron | 40.0% | |
CCAAGAATAGTAATGCAGCA+TGG | - | chr8_1:82698442-82698461 | None:intergenic | 40.0% | |
CCATGCTGCATTACTATTCT+TGG | + | chr8_1:82698439-82698458 | Msa1219790:intron | 40.0% | |
CAAGCACTATGACTGACATT+TGG | + | chr8_1:82698559-82698578 | Msa1219790:intron | 40.0% | |
TGCTTATAGCTTAACAACGG+AGG | - | chr8_1:82698623-82698642 | None:intergenic | 40.0% | |
AGAAATGGATGTCCACTTGT+TGG | + | chr8_1:82698659-82698678 | Msa1219790:CDS | 40.0% | |
! | CAATTGATTCACCCTTCTTC+AGG | + | chr8_1:82698741-82698760 | Msa1219790:CDS | 40.0% |
TATACGCGCTACTTCTACAA+TGG | + | chr8_1:82698813-82698832 | Msa1219790:intron | 40.0% | |
TGCAAATGTCTGTAGGAGTA+TGG | - | chr8_1:82698993-82699012 | None:intergenic | 40.0% | |
! | ATGGGCTTTTCATGTCTTGT+AGG | - | chr8_1:82699231-82699250 | None:intergenic | 40.0% |
!! | GAATAGTCTCATTTTGGCGA+TGG | + | chr8_1:82699277-82699296 | Msa1219790:intron | 40.0% |
!! | TATTCTCGTTTGGGTTTTCC+TGG | + | chr8_1:82699497-82699516 | Msa1219790:intron | 40.0% |
!! | ATTCTCGTTTGGGTTTTCCT+GGG | + | chr8_1:82699498-82699517 | Msa1219790:intron | 40.0% |
AGAAAGATACAAAGACAGGG+GGG | - | chr8_1:82699537-82699556 | None:intergenic | 40.0% | |
GAGAAAGATACAAAGACAGG+GGG | - | chr8_1:82699538-82699557 | None:intergenic | 40.0% | |
CAACATCATATATGGGACAC+CGG | - | chr8_1:82699706-82699725 | None:intergenic | 40.0% | |
! | GACTAGGCTTCGCAATATTT+TGG | + | chr8_1:82699920-82699939 | Msa1219790:intron | 40.0% |
CAAGCTCTTCTTAAATGAGC+AGG | - | chr8_1:82700004-82700023 | None:intergenic | 40.0% | |
AGAAGAGCTTGCATAGTCAA+TGG | + | chr8_1:82700013-82700032 | Msa1219790:CDS | 40.0% | |
GATATTATTGAAGCTGCAGG+AGG | + | chr8_1:82700455-82700474 | Msa1219790:CDS | 40.0% | |
ATGACAGTTAACCAAGTGGA+AGG | - | chr8_1:82700483-82700502 | None:intergenic | 40.0% | |
CACTTGGTTAACTGTCATGT+GGG | + | chr8_1:82700485-82700504 | Msa1219790:CDS | 40.0% | |
ATCCCATTCTGAATTTGCCT+TGG | - | chr8_1:82700941-82700960 | None:intergenic | 40.0% | |
AAGGCAAATTCAGAATGGGA+TGG | + | chr8_1:82700940-82700959 | Msa1219790:intron | 40.0% | |
!! | CCAAAGAGTATCAAGCCAAA+TGG | - | chr8_1:82700967-82700986 | None:intergenic | 40.0% |
!! | CCATTTGGCTTGATACTCTT+TGG | + | chr8_1:82700964-82700983 | Msa1219790:intron | 40.0% |
!! | TTCAGTTGGATTAGCAAGAG+AGG | - | chr8_1:82701151-82701170 | None:intergenic | 40.0% |
!!! | AAGGCTGCAGTTTTGATTCT+TGG | + | chr8_1:82701267-82701286 | Msa1219790:CDS | 40.0% |
!!! | AGGCTGCAGTTTTGATTCTT+GGG | + | chr8_1:82701268-82701287 | Msa1219790:CDS | 40.0% |
! | TTTGGGATCTTTGTACCTGA+AGG | + | chr8_1:82701404-82701423 | Msa1219790:CDS | 40.0% |
AGATCAGTGCAGATTGTTGA+AGG | + | chr8_1:82701527-82701546 | Msa1219790:intron | 40.0% | |
!! | GAAGGCATTCCAAATGTAAC+TGG | + | chr8_1:82701545-82701564 | Msa1219790:CDS | 40.0% |
TGGAATTCAGCTTGATGTGA+TGG | + | chr8_1:82701565-82701584 | Msa1219790:CDS | 40.0% | |
! | TTGTTCTCGTATTTTGCAGG+TGG | + | chr8_1:82701807-82701826 | Msa1219790:intron | 40.0% |
ACGATAATGTGACAACTAGG+GGG | - | chr8_1:82701853-82701872 | None:intergenic | 40.0% | |
GCTACGATAATGTGACAACT+AGG | - | chr8_1:82701856-82701875 | None:intergenic | 40.0% | |
CTTATCATCTAGCATGGACA+TGG | - | chr8_1:82702282-82702301 | None:intergenic | 40.0% | |
CATGTCCATGCTAGATGATA+AGG | + | chr8_1:82702280-82702299 | Msa1219790:CDS | 40.0% | |
GATGATAAGGCTAAAGATGC+TGG | + | chr8_1:82702293-82702312 | Msa1219790:CDS | 40.0% | |
ACTAGGTCATACCTATTCCT+GGG | - | chr8_1:82702349-82702368 | None:intergenic | 40.0% | |
TACTAGGTCATACCTATTCC+TGG | - | chr8_1:82702350-82702369 | None:intergenic | 40.0% | |
CGGGATGAAAATAAGAAGAC+AGG | - | chr8_1:82702674-82702693 | None:intergenic | 40.0% | |
! | AAGTTTTCAGCCAATGTGTC+GGG | - | chr8_1:82702693-82702712 | None:intergenic | 40.0% |
! | GAAGTTTTCAGCCAATGTGT+CGG | - | chr8_1:82702694-82702713 | None:intergenic | 40.0% |
TGATGATCCAGATCACATGA+TGG | + | chr8_1:82702784-82702803 | Msa1219790:intron | 40.0% | |
TTCATTGCCATCATGTGATC+TGG | - | chr8_1:82702794-82702813 | None:intergenic | 40.0% | |
AAGTCTTTCACTTCCTACTG+TGG | + | chr8_1:82702851-82702870 | Msa1219790:CDS | 40.0% | |
!! | AATGGATTGTTGGCATCTTC+AGG | - | chr8_1:82702890-82702909 | None:intergenic | 40.0% |
CTATGCAAACAGTTCTCTGA+TGG | + | chr8_1:82702944-82702963 | Msa1219790:intron | 40.0% | |
!! | ACTTTTGGTAGCTGAATAGC+CGG | + | chr8_1:82702982-82703001 | Msa1219790:intron | 40.0% |
! | GCCGGTACTTGTTACATTTA+TGG | + | chr8_1:82703000-82703019 | Msa1219790:intron | 40.0% |
!!! | CCACAAGTGATGCTTTTTCA+AGG | - | chr8_1:82703049-82703068 | None:intergenic | 40.0% |
!! | CCTTGAAAAAGCATCACTTG+TGG | + | chr8_1:82703046-82703065 | Msa1219790:intron | 40.0% |
TGGTTGCCAATTATTTCAGC+TGG | + | chr8_1:82703193-82703212 | Msa1219790:intron | 40.0% | |
TATTTCAGCTGGAATCCTGT+AGG | + | chr8_1:82703204-82703223 | Msa1219790:intron | 40.0% | |
AGTTTCGCCGTGATATTTGT+AGG | - | chr8_1:82703259-82703278 | None:intergenic | 40.0% | |
TGCTTACTGCTTTGCTTTCA+TGG | - | chr8_1:82703325-82703344 | None:intergenic | 40.0% | |
AAAGCAAAAGCAGGAAAGTC+AGG | - | chr8_1:82703604-82703623 | None:intergenic | 40.0% | |
!! | TGACTTTCCTGCTTTTGCTT+TGG | + | chr8_1:82703603-82703622 | Msa1219790:CDS | 40.0% |
AGACATTCCAAAGCAAAAGC+AGG | - | chr8_1:82703613-82703632 | None:intergenic | 40.0% | |
! | AATCATGCCTTCATAACGGA+GGG | - | chr8_1:82703710-82703729 | None:intergenic | 40.0% |
AAATCATGCCTTCATAACGG+AGG | - | chr8_1:82703711-82703730 | None:intergenic | 40.0% | |
! | TCATCCGACTCTAAAGAATG+AGG | + | chr8_1:82703959-82703978 | Msa1219790:CDS | 40.0% |
!! | CTCTCCTCATTCTTTAGAGT+CGG | - | chr8_1:82703966-82703985 | None:intergenic | 40.0% |
! | CTTCGCGAACAATTTTCAGA+AGG | - | chr8_1:82704016-82704035 | None:intergenic | 40.0% |
GATAGGAGAGGAGGATATAT+CGG | + | chr8_1:82704052-82704071 | Msa1219790:CDS | 40.0% | |
CTACATGAGAGAATACAGTC+CGG | - | chr8_1:82704197-82704216 | None:intergenic | 40.0% | |
!! | AGGCAACATCAAAAGCACTA+TGG | - | chr8_1:82704262-82704281 | None:intergenic | 40.0% |
ATCCTACTCCAACACAGAAA+AGG | + | chr8_1:82704304-82704323 | Msa1219790:CDS | 40.0% | |
! | TACCTTTTCTGTGTTGGAGT+AGG | - | chr8_1:82704309-82704328 | None:intergenic | 40.0% |
GGTATTCTATCTCCACTTCA+TGG | - | chr8_1:82704645-82704664 | None:intergenic | 40.0% | |
! | GAGCTACTTTGCTTGAATTC+GGG | + | chr8_1:82704692-82704711 | Msa1219790:CDS | 40.0% |
TGGAAAAACTACTACTGCCA+TGG | + | chr8_1:82704726-82704745 | Msa1219790:CDS | 40.0% | |
AGCTGGAATACCAACAGTAA+GGG | - | chr8_1:82704752-82704771 | None:intergenic | 40.0% | |
!! | TTCAGACAAGAGGTGTCTTA+AGG | + | chr8_1:82704895-82704914 | Msa1219790:CDS | 40.0% |
!! | GTGTATACTTCAGGTTGGAT+AGG | - | chr8_1:82704921-82704940 | None:intergenic | 40.0% |
! | CATCTTTCACTCAGTATCGA+AGG | - | chr8_1:82705275-82705294 | None:intergenic | 40.0% |
CTATCGTTCTACATCAGCAA+TGG | + | chr8_1:82705675-82705694 | Msa1219790:three_prime_UTR | 40.0% | |
AAGATCCTAGGACTCAAAAG+AGG | - | chr8_1:82705760-82705779 | None:intergenic | 40.0% | |
!! | ATGTTTGGGAACGGTGTTGT+TGG | + | chr8_1:82696340-82696359 | Msa1219790:CDS | 45.0% |
!! | TGTTTGGGAACGGTGTTGTT+GGG | + | chr8_1:82696341-82696360 | Msa1219790:CDS | 45.0% |
! | GGAAATTTTGCTGGTAGAGC+TGG | + | chr8_1:82697089-82697108 | Msa1219790:CDS | 45.0% |
AAGGCTGCAGTCATTTCTGT+TGG | + | chr8_1:82697339-82697358 | Msa1219790:CDS | 45.0% | |
! | GCTTCTACCCCATACTTTTG+TGG | + | chr8_1:82697862-82697881 | Msa1219790:CDS | 45.0% |
!!! | GTTGACTCGACCTTGAGTTT+TGG | + | chr8_1:82698215-82698234 | Msa1219790:intron | 45.0% |
GCACCATACACATCCGTAAT+TGG | + | chr8_1:82698377-82698396 | Msa1219790:CDS | 45.0% | |
CCTCTCCAAACAAGTGGATA+TGG | - | chr8_1:82698773-82698792 | None:intergenic | 45.0% | |
CCATATCCACTTGTTTGGAG+AGG | + | chr8_1:82698770-82698789 | Msa1219790:intron | 45.0% | |
AAATGACCTGCTGCATGCAA+TGG | + | chr8_1:82698856-82698875 | Msa1219790:intron | 45.0% | |
AGCAATGGATAGTGCTAAGG+AGG | - | chr8_1:82698966-82698985 | None:intergenic | 45.0% | |
GCAAGCAATGGATAGTGCTA+AGG | - | chr8_1:82698969-82698988 | None:intergenic | 45.0% | |
! | TAGGAGTATGGAGCAAGCAA+TGG | - | chr8_1:82698981-82699000 | None:intergenic | 45.0% |
! | GGCTTTTCATGTCTTGTAGG+AGG | - | chr8_1:82699228-82699247 | None:intergenic | 45.0% |
AGAGCTTGCATAGTCAATGG+AGG | + | chr8_1:82700016-82700035 | Msa1219790:CDS | 45.0% | |
! | CCTCTTAAAATGGGCTTGCA+GGG | + | chr8_1:82700230-82700249 | Msa1219790:CDS | 45.0% |
TAAAACAGCAGGATCGCCAA+TGG | - | chr8_1:82700343-82700362 | None:intergenic | 45.0% | |
GATTGCTGAACATGTCTGAC+AGG | + | chr8_1:82700382-82700401 | Msa1219790:intron | 45.0% | |
CCACATGACAGTTAACCAAG+TGG | - | chr8_1:82700487-82700506 | None:intergenic | 45.0% | |
CCACTTGGTTAACTGTCATG+TGG | + | chr8_1:82700484-82700503 | Msa1219790:CDS | 45.0% | |
TATTCCTTCAGGTATGGGAG+CGG | - | chr8_1:82700759-82700778 | None:intergenic | 45.0% | |
AATTGGCACCTCACTTAGAG+AGG | - | chr8_1:82700899-82700918 | None:intergenic | 45.0% | |
GGCCAAGGCAAATTCAGAAT+GGG | + | chr8_1:82700936-82700955 | Msa1219790:intron | 45.0% | |
TCAGAATGGGATGGACCATT+TGG | + | chr8_1:82700949-82700968 | Msa1219790:intron | 45.0% | |
!! | ACAGGTTGGTGCAGATGATA+AGG | + | chr8_1:82701095-82701114 | Msa1219790:intron | 45.0% |
TGCAGATGATAAGGCTGTTC+TGG | + | chr8_1:82701104-82701123 | Msa1219790:CDS | 45.0% | |
TCATGAAAACGGCATGGAGA+AGG | + | chr8_1:82701227-82701246 | Msa1219790:CDS | 45.0% | |
!!! | GGCTGCAGTTTTGATTCTTG+GGG | + | chr8_1:82701269-82701288 | Msa1219790:CDS | 45.0% |
GATGATAGCATTTGAGCAGC+TGG | - | chr8_1:82701312-82701331 | None:intergenic | 45.0% | |
CATCATTTGGATCCAGCCAA+TGG | + | chr8_1:82701328-82701347 | Msa1219790:CDS | 45.0% | |
CGTAGCAAATGCTTGCATTG+AGG | + | chr8_1:82701870-82701889 | Msa1219790:CDS | 45.0% | |
! | AATTCTTGGTGAGATGGGCT+TGG | + | chr8_1:82702322-82702341 | Msa1219790:CDS | 45.0% |
TTGACGCATTTCCAACCAAC+AGG | + | chr8_1:82702737-82702756 | Msa1219790:intron | 45.0% | |
TCTTTCACTTCCTACTGTGG+TGG | + | chr8_1:82702854-82702873 | Msa1219790:CDS | 45.0% | |
TTGTTGGCATCTTCAGGAGA+TGG | - | chr8_1:82702884-82702903 | None:intergenic | 45.0% | |
CCTGCCACCTACAAATATCA+CGG | + | chr8_1:82703249-82703268 | Msa1219790:CDS | 45.0% | |
TTCGCCGTGATATTTGTAGG+TGG | - | chr8_1:82703256-82703275 | None:intergenic | 45.0% | |
! | GAAGCATCAACTGTCTTTCG+TGG | + | chr8_1:82703682-82703701 | Msa1219790:CDS | 45.0% |
AGATCATGGCGACACTTTCT+AGG | + | chr8_1:82703913-82703932 | Msa1219790:CDS | 45.0% | |
!! | ATGGCGACACTTTCTAGGAT+TGG | + | chr8_1:82703918-82703937 | Msa1219790:CDS | 45.0% |
ATTGTTCGCGAAGATCCAGA+TGG | + | chr8_1:82704023-82704042 | Msa1219790:CDS | 45.0% | |
!! | GATCCAGATGGAGCATTGAT+AGG | + | chr8_1:82704035-82704054 | Msa1219790:CDS | 45.0% |
TCTCCTATCAATGCTCCATC+TGG | - | chr8_1:82704041-82704060 | None:intergenic | 45.0% | |
!! | AGATGGAGCATTGATAGGAG+AGG | + | chr8_1:82704040-82704059 | Msa1219790:CDS | 45.0% |
GAGAGGAGGATATATCGGAA+AGG | + | chr8_1:82704057-82704076 | Msa1219790:CDS | 45.0% | |
AAGCACTATGGCATGAAGCA+GGG | - | chr8_1:82704250-82704269 | None:intergenic | 45.0% | |
! | AAAGCACTATGGCATGAAGC+AGG | - | chr8_1:82704251-82704270 | None:intergenic | 45.0% |
! | GGTACTTTTGCACCATGAAG+TGG | + | chr8_1:82704630-82704649 | Msa1219790:CDS | 45.0% |
AATACCAACAGTAAGGGCCA+TGG | - | chr8_1:82704746-82704765 | None:intergenic | 45.0% | |
CAGCTGGAATACCAACAGTA+AGG | - | chr8_1:82704753-82704772 | None:intergenic | 45.0% | |
CTGGAGTGTATACTTCAGGT+TGG | - | chr8_1:82704926-82704945 | None:intergenic | 45.0% | |
CAACCTGAAGTATACACTCC+AGG | + | chr8_1:82704924-82704943 | Msa1219790:CDS | 45.0% | |
TCACCTGGAGTGTATACTTC+AGG | - | chr8_1:82704930-82704949 | None:intergenic | 45.0% | |
CCTAGGACTCAAAAGAGGTT+TGG | - | chr8_1:82705755-82705774 | None:intergenic | 45.0% | |
!! | CCAAACCTCTTTTGAGTCCT+AGG | + | chr8_1:82705752-82705771 | Msa1219790:three_prime_UTR | 45.0% |
! | GCACAGTGTGATGGAGTCAA+AGG | - | chr8_1:82696406-82696425 | None:intergenic | 50.0% |
TCACAAGACTTGTCACCCTG+TGG | + | chr8_1:82696529-82696548 | Msa1219790:CDS | 50.0% | |
ATGCCAAGGATGAGACCACA+GGG | - | chr8_1:82696547-82696566 | None:intergenic | 50.0% | |
CCTTGGCATCAAACAACCAG+CGG | + | chr8_1:82696558-82696577 | Msa1219790:CDS | 50.0% | |
GGAGGAAAGAATTGTACCGC+TGG | - | chr8_1:82696577-82696596 | None:intergenic | 50.0% | |
ACACGCACCTTATCCAGCAA+AGG | - | chr8_1:82696905-82696924 | None:intergenic | 50.0% | |
TGCAACTCAGGGATTGCCAT+TGG | + | chr8_1:82697371-82697390 | Msa1219790:CDS | 50.0% | |
GCAACTCAGGGATTGCCATT+GGG | + | chr8_1:82697372-82697391 | Msa1219790:CDS | 50.0% | |
CAACTCAGGGATTGCCATTG+GGG | + | chr8_1:82697373-82697392 | Msa1219790:CDS | 50.0% | |
ACGAGAGGACAAATCCCCAA+TGG | - | chr8_1:82697390-82697409 | None:intergenic | 50.0% | |
!! | GTCTTTACTGGCTCGGGAAA+TGG | + | chr8_1:82697414-82697433 | Msa1219790:intron | 50.0% |
CAACGCATCAGTGTCATGTC+TGG | - | chr8_1:82697490-82697509 | None:intergenic | 50.0% | |
ATCCGGTGTCTGACACATGT+CGG | - | chr8_1:82697588-82697607 | None:intergenic | 50.0% | |
!! | TGTAGTTTGCTCTGGTGCTC+AGG | + | chr8_1:82697829-82697848 | Msa1219790:intron | 50.0% |
CATCATCCATTGCATGCAGC+AGG | - | chr8_1:82698865-82698884 | None:intergenic | 50.0% | |
CTGCTGCATGCAATGGATGA+TGG | + | chr8_1:82698863-82698882 | Msa1219790:intron | 50.0% | |
CGATGTGTGAGCATCTTGTC+AGG | - | chr8_1:82699623-82699642 | None:intergenic | 50.0% | |
GGATTCCTACCACGAAGACA+TGG | + | chr8_1:82699759-82699778 | Msa1219790:intron | 50.0% | |
TTCCTACCACGAAGACATGG+AGG | + | chr8_1:82699762-82699781 | Msa1219790:intron | 50.0% | |
TCCTACCACGAAGACATGGA+GGG | + | chr8_1:82699763-82699782 | Msa1219790:intron | 50.0% | |
! | GCCTCTTAAAATGGGCTTGC+AGG | + | chr8_1:82700229-82700248 | Msa1219790:CDS | 50.0% |
! | CCCTGCAAGCCCATTTTAAG+AGG | - | chr8_1:82700233-82700252 | None:intergenic | 50.0% |
GTCTGACAGGTTTCTCTGAG+CGG | + | chr8_1:82700395-82700414 | Msa1219790:intron | 50.0% | |
TTCAGGTATGGGAGCGGTAT+GGG | - | chr8_1:82700753-82700772 | None:intergenic | 50.0% | |
TCTCCATGCCTCTCTAAGTG+AGG | + | chr8_1:82700888-82700907 | Msa1219790:intron | 50.0% | |
! | GTGAGGTGCCAATTCAAGCA+TGG | + | chr8_1:82700905-82700924 | Msa1219790:intron | 50.0% |
AGCATGGTTATTGTGGGCCA+AGG | + | chr8_1:82700921-82700940 | Msa1219790:intron | 50.0% | |
GGGCCAAGGCAAATTCAGAA+TGG | + | chr8_1:82700935-82700954 | Msa1219790:intron | 50.0% | |
!!! | GCAGTTTTGATTCTTGGGGC+TGG | + | chr8_1:82701273-82701292 | Msa1219790:CDS | 50.0% |
ATACCTGCTCTGCATCCTTC+AGG | - | chr8_1:82701422-82701441 | None:intergenic | 50.0% | |
GGCAATGAAGATGATCGACG+AGG | + | chr8_1:82702805-82702824 | Msa1219790:CDS | 50.0% | |
GACGAGGCACATATGCAGAA+GGG | + | chr8_1:82702821-82702840 | Msa1219790:CDS | 50.0% | |
AGATGGAAGTCCACCACAGT+AGG | - | chr8_1:82702867-82702886 | None:intergenic | 50.0% | |
CCGTGATATTTGTAGGTGGC+AGG | - | chr8_1:82703252-82703271 | None:intergenic | 50.0% | |
!! | TGGAGCATTGATAGGAGAGG+AGG | + | chr8_1:82704043-82704062 | Msa1219790:CDS | 50.0% |
TGATGTTGCCTGTTTCCGCA+TGG | + | chr8_1:82704271-82704290 | Msa1219790:CDS | 50.0% | |
AGGATAGTCTCTCCTCCATG+CGG | - | chr8_1:82704289-82704308 | None:intergenic | 50.0% | |
TTCACGGATGTGAGCTCCTT+AGG | + | chr8_1:82704362-82704381 | Msa1219790:intron | 50.0% | |
TGTTGGTATTCCAGCTGCTG+TGG | + | chr8_1:82704756-82704775 | Msa1219790:CDS | 50.0% | |
GTTGGTATTCCAGCTGCTGT+GGG | + | chr8_1:82704757-82704776 | Msa1219790:CDS | 50.0% | |
TCACCCTGTGGTCTCATCCT+TGG | + | chr8_1:82696541-82696560 | Msa1219790:CDS | 55.0% | |
GATGCCAAGGATGAGACCAC+AGG | - | chr8_1:82696548-82696567 | None:intergenic | 55.0% | |
! | CCGCTGGTTGTTTGATGCCA+AGG | - | chr8_1:82696561-82696580 | None:intergenic | 55.0% |
!! | GCGTGGATTGGGACAACGTA+TGG | + | chr8_1:82697127-82697146 | Msa1219790:intron | 55.0% |
TCCTTCCTTGGCTGCTGCTA+AGG | + | chr8_1:82697320-82697339 | Msa1219790:CDS | 55.0% | |
CACCGACATGTGTCAGACAC+CGG | + | chr8_1:82697583-82697602 | Msa1219790:intron | 55.0% | |
!! | CGTTTGGGTTTTCCTGGGTC+AGG | + | chr8_1:82699503-82699522 | Msa1219790:intron | 55.0% |
TACAAAGACAGGGGGGACGT+AGG | - | chr8_1:82699530-82699549 | None:intergenic | 55.0% | |
!! | ACCATATGTCGGTGTCACGC+CGG | + | chr8_1:82699684-82699703 | Msa1219790:intron | 55.0% |
CCTACCACGAAGACATGGAG+GGG | + | chr8_1:82699764-82699783 | Msa1219790:intron | 55.0% | |
CATTCCCCTCCATGTCTTCG+TGG | - | chr8_1:82699771-82699790 | None:intergenic | 55.0% | |
CACGAAGACATGGAGGGGAA+TGG | + | chr8_1:82699769-82699788 | Msa1219790:intron | 55.0% | |
GAGTCAGATTTGCGCATGCG+TGG | - | chr8_1:82700070-82700089 | None:intergenic | 55.0% | |
CTTCAGGTATGGGAGCGGTA+TGG | - | chr8_1:82700754-82700773 | None:intergenic | 55.0% | |
CATACCGCTCCCATACCTGA+AGG | + | chr8_1:82700752-82700771 | Msa1219790:intron | 55.0% | |
GCACCTCACTTAGAGAGGCA+TGG | - | chr8_1:82700894-82700913 | None:intergenic | 55.0% | |
GTACCTGAAGGATGCAGAGC+AGG | + | chr8_1:82701416-82701435 | Msa1219790:CDS | 55.0% | |
ATGGGCTTGGACCCAGGAAT+AGG | + | chr8_1:82702335-82702354 | Msa1219790:CDS | 55.0% | |
CGACGAGGCACATATGCAGA+AGG | + | chr8_1:82702820-82702839 | Msa1219790:CDS | 55.0% | |
CGTGGAACCCTCCGTTATGA+AGG | + | chr8_1:82703700-82703719 | Msa1219790:intron | 55.0% | |
TGTTGCCTGTTTCCGCATGG+AGG | + | chr8_1:82704274-82704293 | Msa1219790:CDS | 55.0% | |
TCTCTCCTCCATGCGGAAAC+AGG | - | chr8_1:82704282-82704301 | None:intergenic | 55.0% | |
ACTGCCATGGCCCTTACTGT+TGG | + | chr8_1:82704739-82704758 | Msa1219790:CDS | 55.0% | |
GCCTTAGCAGCAGCCAAGGA+AGG | - | chr8_1:82697324-82697343 | None:intergenic | 60.0% | |
TGCAGCCTTAGCAGCAGCCA+AGG | - | chr8_1:82697328-82697347 | None:intergenic | 60.0% | |
ACCGGCGTGACACCGACATA+TGG | - | chr8_1:82699688-82699707 | None:intergenic | 60.0% | |
CCCCTCCATGTCTTCGTGGT+AGG | - | chr8_1:82699767-82699786 | None:intergenic | 60.0% | |
TGCAGGAGGCTCCTTCCACT+TGG | + | chr8_1:82700469-82700488 | Msa1219790:CDS | 60.0% | |
AGGATTGCGTCCAGCTCGGA+TGG | - | chr8_1:82703232-82703251 | None:intergenic | 60.0% | |
TGGCAGGATTGCGTCCAGCT+CGG | - | chr8_1:82703236-82703255 | None:intergenic | 60.0% | |
GGTTGTGGTCTTTGCAGCGC+TGG | + | chr8_1:82705504-82705523 | Msa1219790:intron | 60.0% | |
! | GGTGAGATGGGCTTGGACCC+AGG | + | chr8_1:82702329-82702348 | Msa1219790:CDS | 65.0% |
CCAGCTCGGATGGCACCTAC+AGG | - | chr8_1:82703222-82703241 | None:intergenic | 65.0% | |
! | CCTGTAGGTGCCATCCGAGC+TGG | + | chr8_1:82703219-82703238 | Msa1219790:CDS | 65.0% |
TCCAGCTGCTGTGGGAGCTC+TGG | + | chr8_1:82704765-82704784 | Msa1219790:CDS | 65.0% | |
ACCAGAGCTCCCACAGCAGC+TGG | - | chr8_1:82704769-82704788 | None:intergenic | 65.0% | |
GGGGACGTAGGACCTGACCC+AGG | - | chr8_1:82699518-82699537 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 82696156 | 82705818 | 82696156 | ID=Msa1219790;Name=Msa1219790 |
chr8_1 | mRNA | 82696156 | 82705818 | 82696156 | ID=Msa1219790-mRNA-1;Parent=Msa1219790;Name=Msa1219790-mRNA-1;_AED=0.11;_eAED=0.13;_QI=184|0.78|0.79|1|1|1|24|245|1013 |
chr8_1 | exon | 82696156 | 82696579 | 82696156 | ID=Msa1219790-mRNA-1:exon:29539;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82696830 | 82696916 | 82696830 | ID=Msa1219790-mRNA-1:exon:29540;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82697014 | 82697143 | 82697014 | ID=Msa1219790-mRNA-1:exon:29541;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82697262 | 82697399 | 82697262 | ID=Msa1219790-mRNA-1:exon:29542;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82697834 | 82697916 | 82697834 | ID=Msa1219790-mRNA-1:exon:29543;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82698096 | 82698206 | 82698096 | ID=Msa1219790-mRNA-1:exon:29544;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82698323 | 82698398 | 82698323 | ID=Msa1219790-mRNA-1:exon:29545;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82698591 | 82698762 | 82698591 | ID=Msa1219790-mRNA-1:exon:29546;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82699827 | 82699885 | 82699827 | ID=Msa1219790-mRNA-1:exon:29547;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82699987 | 82700092 | 82699987 | ID=Msa1219790-mRNA-1:exon:29548;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82700206 | 82700308 | 82700206 | ID=Msa1219790-mRNA-1:exon:29549;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82700404 | 82700544 | 82700404 | ID=Msa1219790-mRNA-1:exon:29550;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82701099 | 82701437 | 82701099 | ID=Msa1219790-mRNA-1:exon:29551;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82701539 | 82701619 | 82701539 | ID=Msa1219790-mRNA-1:exon:29552;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82701826 | 82701891 | 82701826 | ID=Msa1219790-mRNA-1:exon:29553;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82702239 | 82702356 | 82702239 | ID=Msa1219790-mRNA-1:exon:29554;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82702795 | 82702924 | 82702795 | ID=Msa1219790-mRNA-1:exon:29555;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82703212 | 82703291 | 82703212 | ID=Msa1219790-mRNA-1:exon:29556;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82703563 | 82703712 | 82703563 | ID=Msa1219790-mRNA-1:exon:29557;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82703904 | 82704141 | 82703904 | ID=Msa1219790-mRNA-1:exon:29558;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82704217 | 82704325 | 82704217 | ID=Msa1219790-mRNA-1:exon:29559;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82704625 | 82704786 | 82704625 | ID=Msa1219790-mRNA-1:exon:29560;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82704876 | 82704945 | 82704876 | ID=Msa1219790-mRNA-1:exon:29561;Parent=Msa1219790-mRNA-1 |
chr8_1 | exon | 82705521 | 82705818 | 82705521 | ID=Msa1219790-mRNA-1:exon:29562;Parent=Msa1219790-mRNA-1 |
chr8_1 | five_prime_UTR | 82696156 | 82696339 | 82696156 | ID=Msa1219790-mRNA-1:five_prime_utr;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82696340 | 82696579 | 82696340 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82696830 | 82696916 | 82696830 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82697014 | 82697143 | 82697014 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82697262 | 82697399 | 82697262 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82697834 | 82697916 | 82697834 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82698096 | 82698206 | 82698096 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82698323 | 82698398 | 82698323 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82698591 | 82698762 | 82698591 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82699827 | 82699885 | 82699827 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82699987 | 82700092 | 82699987 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82700206 | 82700308 | 82700206 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82700404 | 82700544 | 82700404 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82701099 | 82701437 | 82701099 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82701539 | 82701619 | 82701539 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82701826 | 82701891 | 82701826 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82702239 | 82702356 | 82702239 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82702795 | 82702924 | 82702795 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82703212 | 82703291 | 82703212 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82703563 | 82703712 | 82703563 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82703904 | 82704141 | 82703904 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82704217 | 82704325 | 82704217 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82704625 | 82704786 | 82704625 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82704876 | 82704945 | 82704876 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | CDS | 82705521 | 82705573 | 82705521 | ID=Msa1219790-mRNA-1:cds;Parent=Msa1219790-mRNA-1 |
chr8_1 | three_prime_UTR | 82705574 | 82705818 | 82705574 | ID=Msa1219790-mRNA-1:three_prime_utr;Parent=Msa1219790-mRNA-1 |
Gene Sequence |
Protein sequence |