Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401550 | XP_003609929.1 | 96.558 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0 | 2102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401550 | sp|Q9SMZ4|AASS_ARATH | 69.005 | 1055 | 315 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401550 | G7JS28 | 96.558 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0 | 2102 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0083240 | Msa1401550 | 0.829728 | 4.376201e-55 | -8.615850e-47 |
| Msa0086190 | Msa1401550 | 0.808208 | 3.467541e-50 | -8.615850e-47 |
| Msa0087550 | Msa1401550 | 0.810449 | 1.146265e-50 | -8.615850e-47 |
| Msa0093740 | Msa1401550 | 0.821627 | 3.651134e-53 | -8.615850e-47 |
| Msa1401550 | Msa1412410 | 0.847583 | 1.055109e-59 | -8.615850e-47 |
| Msa1401550 | Msa1427860 | 0.844967 | 5.445203e-59 | -8.615850e-47 |
| Msa1401550 | Msa1462640 | 0.870271 | 1.655871e-66 | -8.615850e-47 |
| Msa0609420 | Msa1401550 | 0.822859 | 1.890230e-53 | -8.615850e-47 |
| Msa0611320 | Msa1401550 | 0.803132 | 4.033973e-49 | -8.615850e-47 |
| Msa0613800 | Msa1401550 | 0.845627 | 3.609097e-59 | -8.615850e-47 |
| Msa0617040 | Msa1401550 | 0.869699 | 2.545629e-66 | -8.615850e-47 |
| Msa0626180 | Msa1401550 | 0.824035 | 1.003817e-53 | -8.615850e-47 |
| Msa0649820 | Msa1401550 | 0.831749 | 1.399126e-55 | -8.615850e-47 |
| Msa0650060 | Msa1401550 | 0.827400 | 1.597766e-54 | -8.615850e-47 |
| Msa0652700 | Msa1401550 | 0.868741 | 5.212441e-66 | -8.615850e-47 |
| Msa0656100 | Msa1401550 | 0.869771 | 2.412014e-66 | -8.615850e-47 |
| Msa0664030 | Msa1401550 | 0.811944 | 5.433137e-51 | -8.615850e-47 |
| Msa0665610 | Msa1401550 | 0.812784 | 3.561289e-51 | -8.615850e-47 |
| Msa0697020 | Msa1401550 | 0.825536 | 4.442945e-54 | -8.615850e-47 |
| Msa0708600 | Msa1401550 | 0.815366 | 9.590853e-52 | -8.615850e-47 |
| Msa0129640 | Msa1401550 | 0.843686 | 1.202550e-58 | -8.615850e-47 |
| Msa0132430 | Msa1401550 | 0.802503 | 5.440706e-49 | -8.615850e-47 |
| Msa0134270 | Msa1401550 | 0.805256 | 1.457696e-49 | -8.615850e-47 |
| Msa0180820 | Msa1401550 | 0.808649 | 2.792172e-50 | -8.615850e-47 |
| Msa0182020 | Msa1401550 | 0.813876 | 2.050253e-51 | -8.615850e-47 |
| Msa1267080 | Msa1401550 | 0.980691 | 8.291103e-151 | -8.615850e-47 |
| Msa1302340 | Msa1401550 | 0.806040 | 9.976183e-50 | -8.615850e-47 |
| Msa0374790 | Msa1401550 | 0.825403 | 4.778784e-54 | -8.615850e-47 |
| Msa0381470 | Msa1401550 | 0.890187 | 1.235360e-73 | -8.615850e-47 |
| Msa0413130 | Msa1401550 | 0.815180 | 1.055228e-51 | -8.615850e-47 |
| Msa0424000 | Msa1401550 | 0.827988 | 1.153844e-54 | -8.615850e-47 |
| Msa0434140 | Msa1401550 | 0.812716 | 3.685306e-51 | -8.615850e-47 |
| Msa0458220 | Msa1401550 | 0.823805 | 1.136785e-53 | -8.615850e-47 |
| Msa0470920 | Msa1401550 | 0.854505 | 1.177502e-61 | -8.615850e-47 |
| Msa0476070 | Msa1401550 | 0.891254 | 4.699340e-74 | -8.615850e-47 |
| Msa0480770 | Msa1401550 | 0.868008 | 8.983817e-66 | -8.615850e-47 |
| Msa0481100 | Msa1401550 | 0.878069 | 3.781950e-69 | -8.615850e-47 |
| Msa0982380 | Msa1401550 | 0.811565 | 6.568314e-51 | -8.615850e-47 |
| Msa1026140 | Msa1401550 | 0.807828 | 4.176289e-50 | -8.615850e-47 |
| Msa1028660 | Msa1401550 | 0.805958 | 1.038371e-49 | -8.615850e-47 |
| Msa1038940 | Msa1401550 | 0.807505 | 4.892603e-50 | -8.615850e-47 |
| Msa1064890 | Msa1401550 | 0.827471 | 1.536570e-54 | -8.615850e-47 |
| Msa0268070 | Msa1401550 | 0.979963 | 3.888397e-149 | -8.615850e-47 |
| Msa1110010 | Msa1401550 | 0.823860 | 1.103351e-53 | -8.615850e-47 |
| Msa1153650 | Msa1401550 | 0.814362 | 1.601040e-51 | -8.615850e-47 |
| Msa1157200 | Msa1401550 | 0.803330 | 3.669805e-49 | -8.615850e-47 |
| Msa1171510 | Msa1401550 | 0.809793 | 1.587695e-50 | -8.615850e-47 |
| Msa1217260 | Msa1401550 | 0.808383 | 3.181793e-50 | -8.615850e-47 |
| Msa1217950 | Msa1401550 | 0.882881 | 7.182263e-71 | -8.615850e-47 |
| Msa1219790 | Msa1401550 | 0.979730 | 1.293372e-148 | -8.615850e-47 |
| Msa0504700 | Msa1401550 | 0.816665 | 4.918911e-52 | -8.615850e-47 |
| Msa0519910 | Msa1401550 | 0.880304 | 6.128155e-70 | -8.615850e-47 |
| Msa0530790 | Msa1401550 | 0.800995 | 1.109162e-48 | -8.615850e-47 |
| Msa0562800 | Msa1401550 | 0.814425 | 1.550601e-51 | -8.615850e-47 |
| Msa0577370 | Msa1401550 | 0.831036 | 2.095416e-55 | -8.615850e-47 |
| Msa0586160 | Msa1401550 | 0.831637 | 1.491056e-55 | -8.615850e-47 |
| Msa0587630 | Msa1401550 | 0.803707 | 3.066311e-49 | -8.615850e-47 |
| Msa0602180 | Msa1401550 | 0.812386 | 4.351309e-51 | -8.615850e-47 |
| Msa0945230 | Msa1401550 | 0.864000 | 1.665214e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401550 | MtrunA17_Chr4g0069831 | 96.558 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0 | 2102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401550 | AT4G33150.1 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
| Msa1401550 | AT4G33150.2 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
| Msa1401550 | AT4G33150.4 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
| Msa1401550 | AT4G33150.3 | 64.938 | 482 | 164 | 2 | 568 | 1046 | 3 | 482 | 0.0 | 657 |
Find 235 sgRNAs with CRISPR-Local
Find 557 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCGCAACTCTTTAATTTA+TGG | 0.062968 | tig0022711:-50295 | Msa1401550:CDS |
| CAAACTTGCCTGCTCATTTA+AGG | 0.104303 | tig0022711:-53939 | Msa1401550:CDS |
| AATAGATGTTGATATCATTT+TGG | 0.140848 | tig0022711:-52546 | Msa1401550:CDS |
| TATCAGAATCTGTGAATAAA+TGG | 0.154234 | tig0022711:-57372 | Msa1401550:CDS |
| AGAAGGTTGAACAATAATTT+TGG | 0.164479 | tig0022711:+57285 | None:intergenic |
| GACTAGGCTTCGCAATATTT+TGG | 0.165045 | tig0022711:-54012 | Msa1401550:intron |
| GTCCCAATTTGTCACAAATT+TGG | 0.171779 | tig0022711:-53980 | Msa1401550:CDS |
| CTTTCTGTGCCTTGTGAGTA+TGG | 0.204473 | tig0022711:+56861 | None:intergenic |
| GAATTGATTGTTGGAGAAAA+TGG | 0.208921 | tig0022711:-56685 | Msa1401550:CDS |
| TTAATTTATGGAGATTTATA+TGG | 0.210990 | tig0022711:-50283 | Msa1401550:CDS |
| AAACACTTTCATGGGATCTT+TGG | 0.220013 | tig0022711:+55555 | None:intergenic |
| AAGCCAAATTTGTGACAAAT+TGG | 0.238819 | tig0022711:+53977 | None:intergenic |
| TGTAGTTCACTTAGTTTAGA+TGG | 0.273032 | tig0022711:+55846 | None:intergenic |
| TTGATGTGGTTTATGTGTTT+TGG | 0.291333 | tig0022711:+48126 | None:intergenic |
| GGGAAAAGATTACTTGCATT+TGG | 0.294277 | tig0022711:-56664 | Msa1401550:CDS |
| GCACCAGACACATCCGTTAT+TGG | 0.303263 | tig0022711:-55356 | Msa1401550:intron |
| AATGGATTGTTGGCATCTTC+AGG | 0.309153 | tig0022711:+51045 | None:intergenic |
| CAATTGATTCACCCTTCTTC+AGG | 0.309166 | tig0022711:-54992 | Msa1401550:intron |
| CTTAGTTAATTGCATGTATT+GGG | 0.310022 | tig0022711:-55147 | Msa1401550:intron |
| TAGATGGATCCACAAAAGTA+TGG | 0.312041 | tig0022711:+55862 | None:intergenic |
| CTGCAGCTTCAATAATATCT+AGG | 0.319514 | tig0022711:+53481 | None:intergenic |
| AACACTTTCATGGGATCTTT+GGG | 0.324739 | tig0022711:+55556 | None:intergenic |
| AGATCATGGCGACACTTTCT+AGG | 0.327865 | tig0022711:-50019 | Msa1401550:CDS |
| AGAGCTACTTTGCTTGAATT+CGG | 0.328075 | tig0022711:-49241 | Msa1401550:CDS |
| AAGAAGGCATAAGCTCTATT+TGG | 0.328153 | tig0022711:+56887 | None:intergenic |
| CACTTTGTCAAACACTTTCA+TGG | 0.328950 | tig0022711:+55546 | None:intergenic |
| TACCTGAATTTATATGCTAA+TGG | 0.330123 | tig0022711:+51027 | None:intergenic |
| ACAACACAAGGATTCATTTC+TGG | 0.333123 | tig0022711:-57545 | Msa1401550:five_prime_UTR |
| AGCTGAATTCCAGTTACATT+TGG | 0.335411 | tig0022711:+52378 | None:intergenic |
| GAAAGAAAACATGCCTTTGC+TGG | 0.339421 | tig0022711:-56843 | Msa1401550:CDS |
| GTCTTTACTGGCTCGGGAAA+TGG | 0.347110 | tig0022711:-56318 | Msa1401550:intron |
| TCCTTTCTTGTAGTTTGCTC+TGG | 0.349399 | tig0022711:-55912 | Msa1401550:intron |
| GATGCTGGTATAACAATTCT+TGG | 0.355805 | tig0022711:-51624 | Msa1401550:CDS |
| ATACCTGCTCTGCATCCTTC+AGG | 0.358896 | tig0022711:+52513 | None:intergenic |
| GAGCTACTTTGCTTGAATTC+GGG | 0.360095 | tig0022711:-49240 | Msa1401550:CDS |
| ATTCAAGATTTGATGAGAAA+TGG | 0.360260 | tig0022711:-55089 | Msa1401550:CDS |
| AGAAGTAAGAGGAAGATGTT+TGG | 0.360331 | tig0022711:-57415 | Msa1401550:exon |
| TATGGAGATTTATATGGAAT+AGG | 0.360466 | tig0022711:-50277 | Msa1401550:CDS |
| GGCGAAACTTTACATATTGA+TGG | 0.362283 | tig0022711:-50662 | Msa1401550:intron |
| TGCAGATGATAAGGCTGTTC+TGG | 0.367690 | tig0022711:-52828 | Msa1401550:CDS |
| TATGATTATGAATTGATTGT+TGG | 0.372175 | tig0022711:-56694 | Msa1401550:CDS |
| AAAATTGGAGTGTAATGTTC+AGG | 0.372458 | tig0022711:+55392 | None:intergenic |
| TCTTAGTTAATTGCATGTAT+TGG | 0.375626 | tig0022711:-55148 | Msa1401550:intron |
| TCCAACAGAATTTGCAAAAG+AGG | 0.376427 | tig0022711:-54113 | Msa1401550:intron |
| ACTCAAAAGAGGTTTGGATT+TGG | 0.379545 | tig0022711:+48185 | None:intergenic |
| TCTCCTATCAATGCTCCATC+TGG | 0.384278 | tig0022711:+49894 | None:intergenic |
| GGTATTCTATCTCCACTTCA+TGG | 0.384578 | tig0022711:+49290 | None:intergenic |
| CTGGATATTATACAAGCTTA+TGG | 0.384591 | tig0022711:-48408 | Msa1401550:CDS |
| TCACCCTGTGGTCTCATCCT+TGG | 0.386368 | tig0022711:-57199 | Msa1401550:CDS |
| GAAGGCATTCCAAATGTAAC+TGG | 0.386769 | tig0022711:-52387 | Msa1401550:CDS |
| TCCAGCTGCTGTGGGAGCTC+TGG | 0.387534 | tig0022711:-49167 | Msa1401550:intron |
| GCGTGGTATATAATCATATA+AGG | 0.391117 | tig0022711:+53882 | None:intergenic |
| TCTCTCCTCCATGCGGAAAC+AGG | 0.392544 | tig0022711:+49653 | None:intergenic |
| TCCTTCCTTGGCTGCTGCTA+AGG | 0.392618 | tig0022711:-56412 | Msa1401550:CDS |
| ATCCATTAGCATATAAATTC+AGG | 0.392846 | tig0022711:-51029 | Msa1401550:intron |
| TACTAGGTCATACCTATTCC+TGG | 0.394462 | tig0022711:+51585 | None:intergenic |
| CCTAGGACTCAAAAGAGGTT+TGG | 0.396350 | tig0022711:+48179 | None:intergenic |
| GCAGATATAACTTGTGATAT+AGG | 0.397513 | tig0022711:-55047 | Msa1401550:CDS |
| AGTTTCGCCGTGATATTTGT+AGG | 0.400233 | tig0022711:+50676 | None:intergenic |
| GCTCAAATGCTATCATCATT+TGG | 0.400718 | tig0022711:-52617 | Msa1401550:CDS |
| TAAATTAAAGAGTTGCGGTT+TGG | 0.402978 | tig0022711:+50298 | None:intergenic |
| TGATGAATTCTCTTAGTAGA+AGG | 0.407101 | tig0022711:+57268 | None:intergenic |
| GATCCAGATGGAGCATTGAT+AGG | 0.408026 | tig0022711:-49897 | Msa1401550:CDS |
| TGTAGTTTGCTCTGGTGCTC+AGG | 0.408673 | tig0022711:-55904 | Msa1401550:intron |
| TTTATATGCTAATGGATTGT+TGG | 0.411001 | tig0022711:+51035 | None:intergenic |
| TCACCTGGAGTGTATACTTC+AGG | 0.415501 | tig0022711:+49004 | None:intergenic |
| GCAACTCAGGGATTGCCATT+GGG | 0.415806 | tig0022711:-56360 | Msa1401550:CDS |
| ATTGAGGTTTGAGAAGTAAG+AGG | 0.420624 | tig0022711:-57426 | Msa1401550:five_prime_UTR |
| AATTGATTGTTGGAGAAAAT+GGG | 0.428975 | tig0022711:-56684 | Msa1401550:CDS |
| CCGTGATATTTGTAGGTGGC+AGG | 0.430034 | tig0022711:+50683 | None:intergenic |
| ATGATTCAGCTAAAAGACTA+AGG | 0.430434 | tig0022711:-50357 | Msa1401550:CDS |
| ACCAGAGCTCCCACAGCAGC+TGG | 0.430788 | tig0022711:+49166 | None:intergenic |
| GAATTCGGGAAAACTATTGA+TGG | 0.431573 | tig0022711:-49226 | Msa1401550:CDS |
| TATAATCATATAAGGAGGTT+AGG | 0.433937 | tig0022711:+53890 | None:intergenic |
| GAAGTAAGAGGAAGATGTTT+GGG | 0.434278 | tig0022711:-57414 | Msa1401550:exon |
| ATTGCATGTATTGGGAGAAA+AGG | 0.438391 | tig0022711:-55139 | Msa1401550:CDS |
| CATGTCCATGCTAGATGATA+AGG | 0.441776 | tig0022711:-51652 | Msa1401550:CDS |
| GTAACAGGGTATTTAAGTCT+TGG | 0.442453 | tig0022711:-56477 | Msa1401550:intron |
| AGATCAGTGCAGATTGTTGA+AGG | 0.443060 | tig0022711:-52405 | Msa1401550:intron |
| TTCAGACAAGAGGTGTCTTA+AGG | 0.444078 | tig0022711:-49036 | Msa1401550:CDS |
| AAACATGCCTTTGCTGGATA+AGG | 0.445017 | tig0022711:-56837 | Msa1401550:intron |
| ATTGATTTCTTGCGTGGATT+GGG | 0.450552 | tig0022711:-56616 | Msa1401550:CDS |
| TGATCAATTTCTGATAAATG+AGG | 0.450882 | tig0022711:-53505 | Msa1401550:CDS |
| CGTGGAACCCTCCGTTATGA+AGG | 0.452301 | tig0022711:-50232 | Msa1401550:intron |
| ATGTTTGGGAACGGTGTTGT+TGG | 0.453688 | tig0022711:-57400 | Msa1401550:CDS |
| GGTGAGATGGGCTTGGACCC+AGG | 0.453772 | tig0022711:-51603 | Msa1401550:CDS |
| TGTTAGATATGATGCAATAA+CGG | 0.453846 | tig0022711:-54194 | Msa1401550:intron |
| ATGGGCTTGGACCCAGGAAT+AGG | 0.458978 | tig0022711:-51597 | Msa1401550:intron |
| ATCAGAATCTGTGAATAAAT+GGG | 0.459403 | tig0022711:-57371 | Msa1401550:CDS |
| GATAGGAGAGGAGGATATAT+CGG | 0.461696 | tig0022711:-49880 | Msa1401550:CDS |
| AGGAGAGCTTGCATAGTCAA+TGG | 0.463364 | tig0022711:-53919 | Msa1401550:CDS |
| CCAATGGTATAAAACATTGT+TGG | 0.463677 | tig0022711:-52588 | Msa1401550:CDS |
| ACAGGTTGGTGCAGATGATA+AGG | 0.465036 | tig0022711:-52837 | Msa1401550:intron |
| AGCCAAATTTGTGACAAATT+GGG | 0.465211 | tig0022711:+53978 | None:intergenic |
| ATGGCGACACTTTCTAGGAT+TGG | 0.465848 | tig0022711:-50014 | Msa1401550:CDS |
| ATCATACATGTATCCTTCCT+TGG | 0.466001 | tig0022711:-56424 | Msa1401550:CDS |
| AGATTACTTCATCATGGAAC+TGG | 0.467747 | tig0022711:-57313 | Msa1401550:CDS |
| GATTGATTTCTTGCGTGGAT+TGG | 0.470829 | tig0022711:-56617 | Msa1401550:CDS |
| AATTCTTGGTGAGATGGGCT+TGG | 0.470872 | tig0022711:-51610 | Msa1401550:CDS |
| CAGCTGGAATACCAACAGTA+AGG | 0.471355 | tig0022711:+49182 | None:intergenic |
| TGCAACTCAGGGATTGCCAT+TGG | 0.471975 | tig0022711:-56361 | Msa1401550:CDS |
| AAAGCAAAAGCAGGAAAGTC+AGG | 0.472612 | tig0022711:+50331 | None:intergenic |
| AAAGCACTATGGCATGAAGC+AGG | 0.474044 | tig0022711:+49684 | None:intergenic |
| TCACAACACAACCATAAACT+TGG | 0.477682 | tig0022711:+55599 | None:intergenic |
| CAACTCAGGGATTGCCATTG+GGG | 0.478672 | tig0022711:-56359 | Msa1401550:CDS |
| CTCTCCTCATTCTTTAGAGT+CGG | 0.479336 | tig0022711:+49969 | None:intergenic |
| CTCCATAAATTAAAGAGTTG+CGG | 0.481371 | tig0022711:+50293 | None:intergenic |
| GAAGCATCAACTGTCTTTCG+TGG | 0.483593 | tig0022711:-50250 | Msa1401550:CDS |
| AGTAAAATTTCACTTACGCT+TGG | 0.484189 | tig0022711:-52734 | Msa1401550:CDS |
| ATAACAATTCTTGGTGAGAT+GGG | 0.485910 | tig0022711:-51615 | Msa1401550:CDS |
| TATAACAATTCTTGGTGAGA+TGG | 0.488831 | tig0022711:-51616 | Msa1401550:CDS |
| CATTCCCCTCCATGTCTTCG+TGG | 0.489845 | tig0022711:+54164 | None:intergenic |
| TGCAGCCTTAGCAGCAGCCA+AGG | 0.493775 | tig0022711:+56407 | None:intergenic |
| ACTTTGTCAAACACTTTCAT+GGG | 0.496078 | tig0022711:+55547 | None:intergenic |
| CCGATATCACCTACCAATAA+CGG | 0.497549 | tig0022711:+55343 | None:intergenic |
| ATCCTACTCCAACACAGAAA+AGG | 0.497780 | tig0022711:-49628 | Msa1401550:intron |
| TTTCTGTGCCTTGTGAGTAT+GGG | 0.498508 | tig0022711:+56862 | None:intergenic |
| TGTTGGTATTCCAGCTGCTG+TGG | 0.499554 | tig0022711:-49176 | Msa1401550:CDS |
| CTTGGTAAAGTTCATGAAAA+CGG | 0.501285 | tig0022711:-52716 | Msa1401550:CDS |
| ACTAAGTGAACTACATAAGA+TGG | 0.503097 | tig0022711:-55838 | Msa1401550:intron |
| CTACCAATAACGGATGTGTC+TGG | 0.503459 | tig0022711:+55353 | None:intergenic |
| TGGTGAAGAAATTGCAACTC+AGG | 0.505018 | tig0022711:-56373 | Msa1401550:CDS |
| TGTTTGGGAACGGTGTTGTT+GGG | 0.505431 | tig0022711:-57399 | Msa1401550:CDS |
| CAAGCTCTCCTTAAATGAGC+AGG | 0.507376 | tig0022711:+53931 | None:intergenic |
| CCTGTAGGTGCCATCCGAGC+TGG | 0.508824 | tig0022711:-50713 | Msa1401550:CDS |
| GTACCTGAAGGATGCAGAGC+AGG | 0.509916 | tig0022711:-52516 | Msa1401550:intron |
| CCAGCTCGGATGGCACCTAC+AGG | 0.510844 | tig0022711:+50713 | None:intergenic |
| AGGCAACATCAAAAGCACTA+TGG | 0.511973 | tig0022711:+49673 | None:intergenic |
| CCACTTGGTTAACTGTCATG+TGG | 0.512401 | tig0022711:-53448 | Msa1401550:CDS |
| TTTGGGATCTTTGTACCTGA+AGG | 0.513179 | tig0022711:-52528 | Msa1401550:CDS |
| TATAGGGTTTAGTGAGATCA+TGG | 0.516919 | tig0022711:-50033 | Msa1401550:intron |
| CTAGATATTATTGAAGCTGC+AGG | 0.517883 | tig0022711:-53480 | Msa1401550:CDS |
| AAGAACACGTGATTCTTACA+AGG | 0.522569 | tig0022711:+57507 | None:intergenic |
| CGTAGCAAATGCTTGCATTG+AGG | 0.522620 | tig0022711:-52062 | Msa1401550:intron |
| AGGATTGCGTCCAGCTCGGA+TGG | 0.524365 | tig0022711:+50703 | None:intergenic |
| GCCTTAGCAGCAGCCAAGGA+AGG | 0.525409 | tig0022711:+56411 | None:intergenic |
| TGCAGGAGGCTCCTTCCACT+TGG | 0.526358 | tig0022711:-53463 | Msa1401550:CDS |
| CCGCTGGTTGTTTGATGCCA+AGG | 0.527121 | tig0022711:+57182 | None:intergenic |
| AGATGGATCCACAAAAGTAT+GGG | 0.528191 | tig0022711:+55863 | None:intergenic |
| CACGAAGACATGGAGGGGAA+TGG | 0.528495 | tig0022711:-54163 | Msa1401550:CDS |
| TCATGAAAACGGCATGGAGA+AGG | 0.528840 | tig0022711:-52705 | Msa1401550:CDS |
| AGAAATGGATGTCCACTTGT+TGG | 0.530432 | tig0022711:-55074 | Msa1401550:CDS |
| TTGTTGGCATCTTCAGGAGA+TGG | 0.531880 | tig0022711:+51051 | None:intergenic |
| GCTACGATAATGTGACAACT+AGG | 0.532719 | tig0022711:+52079 | None:intergenic |
| TTTAGCCTTATCATCTAGCA+TGG | 0.533798 | tig0022711:+51647 | None:intergenic |
| GATGATAAGGCTAAAGATGC+TGG | 0.536549 | tig0022711:-51639 | Msa1401550:CDS |
| GTGTATACTTCAGGTTGGAT+AGG | 0.540931 | tig0022711:+49013 | None:intergenic |
| CTTGTGAGTATGGGAAAAGA+AGG | 0.542708 | tig0022711:+56871 | None:intergenic |
| TGCAGCTTCAATAATATCTA+GGG | 0.544465 | tig0022711:+53482 | None:intergenic |
| TGGAGCATTGATAGGAGAGG+AGG | 0.547265 | tig0022711:-49889 | Msa1401550:CDS |
| TGTGCTAGATTACTTCATCA+TGG | 0.548301 | tig0022711:-57319 | Msa1401550:CDS |
| AAGGCTGCAGTCATTTCTGT+TGG | 0.549082 | tig0022711:-56393 | Msa1401550:CDS |
| CTACGATAATGTGACAACTA+GGG | 0.550212 | tig0022711:+52080 | None:intergenic |
| ATATGGTGTATACCTGAAGA+AGG | 0.551418 | tig0022711:+54980 | None:intergenic |
| GTTGGTATTCCAGCTGCTGT+GGG | 0.551669 | tig0022711:-49175 | Msa1401550:CDS |
| GATGATAGCATTTGAGCAGC+TGG | 0.553928 | tig0022711:+52623 | None:intergenic |
| GATGATCCAAGTGACAGAAA+AGG | 0.555873 | tig0022711:+56444 | None:intergenic |
| CACTTGGTTAACTGTCATGT+GGG | 0.556353 | tig0022711:-53447 | Msa1401550:CDS |
| GATGCCAAGGATGAGACCAC+AGG | 0.558412 | tig0022711:+57195 | None:intergenic |
| ACTGCCATGGCCCTTACTGT+TGG | 0.561603 | tig0022711:-49193 | Msa1401550:CDS |
| TGGAATTCAGCTTGATGTGA+TGG | 0.562069 | tig0022711:-52367 | Msa1401550:CDS |
| AGATGGAAGTCCACCACAGT+AGG | 0.563553 | tig0022711:+51068 | None:intergenic |
| CCCCTCCATGTCTTCGTGGT+AGG | 0.565406 | tig0022711:+54168 | None:intergenic |
| TTCAGTTGGATTAGCAAGAG+AGG | 0.565861 | tig0022711:+52784 | None:intergenic |
| ACAAACAAAATTCAGACAAG+AGG | 0.572985 | tig0022711:-49046 | Msa1401550:CDS |
| TATAAATCATGCCTTCATAA+CGG | 0.573146 | tig0022711:+50221 | None:intergenic |
| AGACATTCCAAAGCAAAAGC+AGG | 0.573853 | tig0022711:+50322 | None:intergenic |
| CGACGAGGCACATATGCAGA+AGG | 0.575121 | tig0022711:-51112 | Msa1401550:CDS |
| CTATCGTTCTACATCAGCAA+TGG | 0.575994 | tig0022711:-48256 | Msa1401550:three_prime_UTR |
| GATGCTCTCTATGAAGAAGT+TGG | 0.580939 | tig0022711:-57244 | Msa1401550:CDS |
| ATATCTGCTATTCCAACAAG+TGG | 0.581840 | tig0022711:+55062 | None:intergenic |
| ACTAGGTCATACCTATTCCT+GGG | 0.582968 | tig0022711:+51586 | None:intergenic |
| CATCATTTGGATCCAGCCAA+TGG | 0.586441 | tig0022711:-52604 | Msa1401550:CDS |
| TGGCAGGATTGCGTCCAGCT+CGG | 0.586821 | tig0022711:+50699 | None:intergenic |
| TCTTTCACTTCCTACTGTGG+TGG | 0.587351 | tig0022711:-51078 | Msa1401550:CDS |
| GGTGAAGAAATTGCAACTCA+GGG | 0.588076 | tig0022711:-56372 | Msa1401550:CDS |
| GCACAGTGTGATGGAGTCAA+AGG | 0.595862 | tig0022711:+57337 | None:intergenic |
| CTTATCATCTAGCATGGACA+TGG | 0.596716 | tig0022711:+51653 | None:intergenic |
| TATTTCAGCTGGAATCCTGT+AGG | 0.596927 | tig0022711:-50728 | Msa1401550:intron |
| CAACCTGAAGTATACACTCC+AGG | 0.596974 | tig0022711:-49007 | Msa1401550:intron |
| AGCTGGAATACCAACAGTAA+GGG | 0.599510 | tig0022711:+49183 | None:intergenic |
| GAAACTAATCAAGCAAGGCA+TGG | 0.601563 | tig0022711:-55637 | Msa1401550:CDS |
| CTGGAGTGTATACTTCAGGT+TGG | 0.602410 | tig0022711:+49008 | None:intergenic |
| GAGTCAGATTTGCGCATGCG+TGG | 0.604903 | tig0022711:+53865 | None:intergenic |
| AACAGGAAACTAATCAAGCA+AGG | 0.605183 | tig0022711:-55642 | Msa1401550:intron |
| GGAATGATTGATTTCTTGCG+TGG | 0.606806 | tig0022711:-56622 | Msa1401550:CDS |
| TGATGTTGCCTGTTTCCGCA+TGG | 0.607057 | tig0022711:-49661 | Msa1401550:CDS |
| GGATTCCTACCACGAAGACA+TGG | 0.609570 | tig0022711:-54173 | Msa1401550:CDS |
| TCATCCGACTCTAAAGAATG+AGG | 0.610462 | tig0022711:-49973 | Msa1401550:CDS |
| AGTAATCTAGCACAGTGTGA+TGG | 0.610805 | tig0022711:+57328 | None:intergenic |
| AAATTGGAGTGTAATGTTCA+GGG | 0.611393 | tig0022711:+55393 | None:intergenic |
| AAGAGGAAGATGTTTGGGAA+CGG | 0.612656 | tig0022711:-57409 | Msa1401550:exon |
| AAGTCTTTCACTTCCTACTG+TGG | 0.613298 | tig0022711:-51081 | Msa1401550:CDS |
| AAGATCCTAGGACTCAAAAG+AGG | 0.614343 | tig0022711:+48174 | None:intergenic |
| TACGATAATGTGACAACTAG+GGG | 0.615232 | tig0022711:+52081 | None:intergenic |
| GAGAGGAGGATATATCGGAA+AGG | 0.615819 | tig0022711:-49875 | Msa1401550:CDS |
| AAGCACTATGGCATGAAGCA+GGG | 0.617713 | tig0022711:+49685 | None:intergenic |
| GTCTGACAGGTTTCTCTGAG+CGG | 0.621105 | tig0022711:-53537 | Msa1401550:intron |
| AGATGGAGCATTGATAGGAG+AGG | 0.625287 | tig0022711:-49892 | Msa1401550:CDS |
| AATCATGCCTTCATAACGGA+GGG | 0.629458 | tig0022711:+50225 | None:intergenic |
| TAAAGTTCATGAAAACGGCA+TGG | 0.629653 | tig0022711:-52711 | Msa1401550:CDS |
| ATGACAGTTAACCAAGTGGA+AGG | 0.634711 | tig0022711:+53452 | None:intergenic |
| TCCTACCACGAAGACATGGA+GGG | 0.638823 | tig0022711:-54169 | Msa1401550:CDS |
| CCTGCCACCTACAAATATCA+CGG | 0.645275 | tig0022711:-50683 | Msa1401550:CDS |
| AAATCATGCCTTCATAACGG+AGG | 0.646151 | tig0022711:+50224 | None:intergenic |
| ATCTGCTTATAGCTTAACAA+CGG | 0.647351 | tig0022711:+55110 | None:intergenic |
| GATATAACTTGTGATATAGG+TGG | 0.647734 | tig0022711:-55044 | Msa1401550:CDS |
| TATTCACAAGTCACAACACA+AGG | 0.648837 | tig0022711:-57557 | Msa1401550:five_prime_UTR |
| ACACGCACCTTATCCAGCAA+AGG | 0.648996 | tig0022711:+56830 | None:intergenic |
| TGCTTATAGCTTAACAACGG+AGG | 0.649696 | tig0022711:+55113 | None:intergenic |
| GATATTATTGAAGCTGCAGG+AGG | 0.652514 | tig0022711:-53477 | Msa1401550:CDS |
| AATACCAACAGTAAGGGCCA+TGG | 0.655144 | tig0022711:+49189 | None:intergenic |
| TCACAAGACTTGTCACCCTG+TGG | 0.655585 | tig0022711:-57211 | Msa1401550:CDS |
| ATGCCAAGGATGAGACCACA+GGG | 0.658340 | tig0022711:+57196 | None:intergenic |
| CCTACCACGAAGACATGGAG+GGG | 0.662630 | tig0022711:-54168 | Msa1401550:CDS |
| ATTGTTCGCGAAGATCCAGA+TGG | 0.664052 | tig0022711:-49909 | Msa1401550:CDS |
| TTCCTACCACGAAGACATGG+AGG | 0.664890 | tig0022711:-54170 | Msa1401550:CDS |
| ACGAGAGGACAAATCCCCAA+TGG | 0.665124 | tig0022711:+56345 | None:intergenic |
| CCACATGACAGTTAACCAAG+TGG | 0.665864 | tig0022711:+53448 | None:intergenic |
| GTGAATCAATTGACGTAGTG+CGG | 0.666266 | tig0022711:+55003 | None:intergenic |
| GATGGATCCACAAAAGTATG+GGG | 0.670075 | tig0022711:+55864 | None:intergenic |
| TCGGAAAGGATATTAACACT+AGG | 0.670943 | tig0022711:-49861 | Msa1401550:CDS |
| TGATGATCCAGATCACATGA+TGG | 0.673821 | tig0022711:-51148 | Msa1401550:intron |
| TTCGCCGTGATATTTGTAGG+TGG | 0.679497 | tig0022711:+50679 | None:intergenic |
| GACGAGGCACATATGCAGAA+GGG | 0.682146 | tig0022711:-51111 | Msa1401550:CDS |
| TGGTATATAATCATATAAGG+AGG | 0.687295 | tig0022711:+53885 | None:intergenic |
| TATGGTGTATACCTGAAGAA+GGG | 0.691493 | tig0022711:+54981 | None:intergenic |
| AGAGCTTGCATAGTCAATGG+AGG | 0.692452 | tig0022711:-53916 | Msa1401550:CDS |
| CAAGAGCAAATACAAGACAT+CGG | 0.695369 | tig0022711:-53645 | Msa1401550:intron |
| TGTTGCCTGTTTCCGCATGG+AGG | 0.700266 | tig0022711:-49658 | Msa1401550:CDS |
| TGTTGTGATAGCTCAAGACA+TGG | 0.703959 | tig0022711:-55584 | Msa1401550:CDS |
| CCTTGGCATCAAACAACCAG+CGG | 0.704811 | tig0022711:-57182 | Msa1401550:intron |
| AGGATAGTCTCTCCTCCATG+CGG | 0.707814 | tig0022711:+49646 | None:intergenic |
| GGCAATGAAGATGATCGACG+AGG | 0.724936 | tig0022711:-51127 | Msa1401550:CDS |
| ACGATAATGTGACAACTAGG+GGG | 0.726794 | tig0022711:+52082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAATGTAAGATT+AGG | + | tig0022711:49146-49165 | None:intergenic | 10.0% |
| !!! | GTCTTTTTTTTTTTTTTTAA+TGG | - | tig0022711:52781-52800 | Msa1401550:CDS | 10.0% |
| !!! | TTTAATGTAAGAAATATTTT+TGG | - | tig0022711:53918-53937 | Msa1401550:CDS | 10.0% |
| !! | TTCTTTATAATTATAGTAAT+TGG | - | tig0022711:57112-57131 | Msa1401550:intron | 10.0% |
| !!! | ATTAAGTTTTTGGTAAATTA+AGG | - | tig0022711:48604-48623 | Msa1401550:intron | 15.0% |
| !!! | TATATATATGATGATGATAA+TGG | - | tig0022711:48778-48797 | Msa1401550:intron | 15.0% |
| !! | AACTTATAAAAACCATTATT+TGG | - | tig0022711:49937-49956 | Msa1401550:CDS | 15.0% |
| !! | TGTTAAACAAAGTAAATATA+TGG | + | tig0022711:50062-50081 | None:intergenic | 15.0% |
| !!! | ATATATTTACTTTGTTTAAC+AGG | - | tig0022711:50061-50080 | Msa1401550:intron | 15.0% |
| !! | TTTATCTTTAATCTAAACTA+AGG | + | tig0022711:51047-51066 | None:intergenic | 15.0% |
| !! | ATAGATGAAATGTTATTAAT+GGG | + | tig0022711:51230-51249 | None:intergenic | 15.0% |
| !!! | TAATTTTCTGAAATTATTAC+TGG | + | tig0022711:51437-51456 | None:intergenic | 15.0% |
| !! | TTTAATTCAACATCATATAT+GGG | + | tig0022711:51501-51520 | None:intergenic | 15.0% |
| !! | ATTTAATTCAACATCATATA+TGG | + | tig0022711:51502-51521 | None:intergenic | 15.0% |
| !! | ATACAAATTTATTACAGTTA+AGG | + | tig0022711:51925-51944 | None:intergenic | 15.0% |
| !!! | AACAAATAGGTTTTTTATTT+TGG | - | tig0022711:52448-52467 | Msa1401550:intron | 15.0% |
| !! | AAAGAATTATATTGTTCAAA+TGG | + | tig0022711:52477-52496 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAACTATGC+TGG | + | tig0022711:53530-53549 | None:intergenic | 15.0% |
| !! | ATTAGAAAATATTTGTGTAA+TGG | - | tig0022711:54382-54401 | Msa1401550:intron | 15.0% |
| !! | TTAATTTATGGAGATTTATA+TGG | - | tig0022711:55437-55456 | Msa1401550:intron | 15.0% |
| !!! | ATTTTTAAATTAACAAATCC+AGG | - | tig0022711:55604-55623 | Msa1401550:CDS | 15.0% |
| !!! | GTATAGAAATTTTATCTTTA+TGG | - | tig0022711:55641-55660 | Msa1401550:intron | 15.0% |
| !!! | AAAAAGTATATTCTAACAAA+TGG | + | tig0022711:56767-56786 | None:intergenic | 15.0% |
| !!! | AGATTTTTTTTTAGAACTTT+AGG | - | tig0022711:56876-56895 | Msa1401550:CDS | 15.0% |
| !!! | AAAAGTAGAAATCAATTTTT+TGG | + | tig0022711:57154-57173 | None:intergenic | 15.0% |
| !!! | TGATCAAAACTTTTTTGTTT+TGG | + | tig0022711:48272-48291 | None:intergenic | 20.0% |
| !! | TATGATTATGAATTGATTGT+TGG | - | tig0022711:49026-49045 | Msa1401550:CDS | 20.0% |
| !!! | AAAAGAATTTTCCAAGTTTA+TGG | - | tig0022711:50110-50129 | Msa1401550:intron | 20.0% |
| !! | GCAATTCAAAATTATTTCAA+AGG | + | tig0022711:50925-50944 | None:intergenic | 20.0% |
| !! | CATAGATGAAATGTTATTAA+TGG | + | tig0022711:51231-51250 | None:intergenic | 20.0% |
| !! | AATTGAATATAACCATATGT+CGG | - | tig0022711:51461-51480 | Msa1401550:intron | 20.0% |
| !!! | CATTCAATTTTATTATGACT+AGG | - | tig0022711:51692-51711 | Msa1401550:CDS | 20.0% |
| !! | TCAGTATTATTATTATCCAT+TGG | - | tig0022711:52112-52131 | Msa1401550:intron | 20.0% |
| !!! | TTTTGATTCTATATCATACT+CGG | - | tig0022711:52302-52321 | Msa1401550:intron | 20.0% |
| !!! | ACATTCAAGTTTGAAATAAA+TGG | + | tig0022711:52344-52363 | None:intergenic | 20.0% |
| !!! | GAAAATCTATTATTTTCAGT+TGG | + | tig0022711:52953-52972 | None:intergenic | 20.0% |
| !!! | AATAGATGTTGATATCATTT+TGG | - | tig0022711:53174-53193 | Msa1401550:intron | 20.0% |
| !!! | ATAGATGTTGATATCATTTT+GGG | - | tig0022711:53175-53194 | Msa1401550:intron | 20.0% |
| !!! | TAATGTACAAGCAAATATTT+TGG | + | tig0022711:53238-53257 | None:intergenic | 20.0% |
| !! | CAAAAACAAATGTTAAGATA+TGG | + | tig0022711:53578-53597 | None:intergenic | 20.0% |
| !! | AACTAAAATGATATCTCTTT+AGG | - | tig0022711:53716-53735 | Msa1401550:intron | 20.0% |
| !! | TGATAATTGAATATCAGAAT+AGG | + | tig0022711:54164-54183 | None:intergenic | 20.0% |
| !!! | ATATTCAATTATCATTTTCC+AGG | - | tig0022711:54170-54189 | Msa1401550:CDS | 20.0% |
| !!! | ATTTTCTTTAAATGTGATCT+TGG | - | tig0022711:54281-54300 | Msa1401550:intron | 20.0% |
| !!! | ATTTTCTTTAGTTTGACTAT+TGG | - | tig0022711:55220-55239 | Msa1401550:intron | 20.0% |
| !!! | ACTGAATAACCTTTATTTAT+TGG | - | tig0022711:55324-55343 | Msa1401550:intron | 20.0% |
| !! | ATAGAATTATAAGTTCTTCA+CGG | - | tig0022711:56134-56153 | Msa1401550:intron | 20.0% |
| !!! | TGTTAGAATATACTTTTTTC+TGG | - | tig0022711:56769-56788 | Msa1401550:intron | 20.0% |
| !!! | TTCTTTAAACCAAGATTTTT+AGG | - | tig0022711:56908-56927 | Msa1401550:intron | 20.0% |
| !!! | AGGGAGAAATAAAATATTTT+TGG | - | tig0022711:56931-56950 | Msa1401550:intron | 20.0% |
| !!! | GAGAAATAAAATATTTTTGG+TGG | - | tig0022711:56934-56953 | Msa1401550:intron | 20.0% |
| !! | TCGTCATAAATGAAAAAAAA+GGG | + | tig0022711:57088-57107 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTGATCAGTATTG+AGG | - | tig0022711:48278-48297 | Msa1401550:three_prime_UTR | 25.0% |
| ! | TATCAGAATCTGTGAATAAA+TGG | - | tig0022711:48348-48367 | Msa1401550:three_prime_UTR | 25.0% |
| ! | ATCAGAATCTGTGAATAAAT+GGG | - | tig0022711:48349-48368 | Msa1401550:three_prime_UTR | 25.0% |
| !! | AGAAGGTTGAACAATAATTT+TGG | + | tig0022711:48438-48457 | None:intergenic | 25.0% |
| ! | CTAGTAATTAGTATGAAGAA+AGG | + | tig0022711:48578-48597 | None:intergenic | 25.0% |
| ! | CTTTCTTCATACTAATTACT+AGG | - | tig0022711:48576-48595 | Msa1401550:intron | 25.0% |
| !!! | CTAGGTTGATATTAAGTTTT+TGG | - | tig0022711:48594-48613 | Msa1401550:intron | 25.0% |
| ! | AGATTAATCACTCAATGTAA+CGG | - | tig0022711:48648-48667 | Msa1401550:intron | 25.0% |
| ! | ATGAAGTGACAAATTAGAAA+TGG | + | tig0022711:48963-48982 | None:intergenic | 25.0% |
| ! | AATTGATTGTTGGAGAAAAT+GGG | - | tig0022711:49036-49055 | Msa1401550:CDS | 25.0% |
| !! | ATCTGTTTTATGTATGTAAC+AGG | - | tig0022711:49228-49247 | Msa1401550:CDS | 25.0% |
| !! | TCTGTTTTATGTATGTAACA+GGG | - | tig0022711:49229-49248 | Msa1401550:CDS | 25.0% |
| ! | TCATTATCTCTGCTTAATAA+AGG | + | tig0022711:49677-49696 | None:intergenic | 25.0% |
| !! | ACATTAACAAGCAAAAGTAT+AGG | + | tig0022711:49755-49774 | None:intergenic | 25.0% |
| ! | CTCTAAATCATACCAAATAA+TGG | + | tig0022711:49952-49971 | None:intergenic | 25.0% |
| ! | TCACTTAACTTTAAGCAATT+TGG | + | tig0022711:50004-50023 | None:intergenic | 25.0% |
| ! | GACATTAGTAGATAAACAAT+TGG | + | tig0022711:50233-50252 | None:intergenic | 25.0% |
| !!! | GCTATTTTTTCATGGAAAAT+TGG | + | tig0022711:50346-50365 | None:intergenic | 25.0% |
| !!! | TTGGCTAAAATTTTGTTTTG+CGG | - | tig0022711:50445-50464 | Msa1401550:intron | 25.0% |
| !!! | CATGAATAAATTTAGCTTTC+TGG | - | tig0022711:50500-50519 | Msa1401550:intron | 25.0% |
| ! | TCTTAGTTAATTGCATGTAT+TGG | - | tig0022711:50572-50591 | Msa1401550:intron | 25.0% |
| ! | CTTAGTTAATTGCATGTATT+GGG | - | tig0022711:50573-50592 | Msa1401550:intron | 25.0% |
| ! | ATTCAAGATTTGATGAGAAA+TGG | - | tig0022711:50631-50650 | Msa1401550:intron | 25.0% |
| !! | GCATTTTGTAACCTAATATA+TGG | + | tig0022711:51091-51110 | None:intergenic | 25.0% |
| !! | TTGGCTCAATTTTTATGAAA+GGG | + | tig0022711:51154-51173 | None:intergenic | 25.0% |
| !!! | ATTGGCTCAATTTTTATGAA+AGG | + | tig0022711:51155-51174 | None:intergenic | 25.0% |
| !! | AACTGACTTTGTTATATGAT+TGG | + | tig0022711:51173-51192 | None:intergenic | 25.0% |
| !! | ACTGTCATAGTTGATATATT+AGG | + | tig0022711:51301-51320 | None:intergenic | 25.0% |
| ! | ATCAAAAGAGGAATCTAATT+TGG | + | tig0022711:51360-51379 | None:intergenic | 25.0% |
| ! | TGTTAGATATGATGCAATAA+CGG | - | tig0022711:51526-51545 | Msa1401550:intron | 25.0% |
| ! | TATAATCATATAAGGAGGTT+AGG | + | tig0022711:51833-51852 | None:intergenic | 25.0% |
| ! | TGGTATATAATCATATAAGG+AGG | + | tig0022711:51838-51857 | None:intergenic | 25.0% |
| ! | ACCAACAAATTGAAAGAAAA+GGG | + | tig0022711:51953-51972 | None:intergenic | 25.0% |
| ! | AACCAACAAATTGAAAGAAA+AGG | + | tig0022711:51954-51973 | None:intergenic | 25.0% |
| !!! | TTCTTTCAATTTGTTGGTTT+TGG | - | tig0022711:51955-51974 | Msa1401550:intron | 25.0% |
| ! | AAATAAGCGCTATAAAAAAG+AGG | + | tig0022711:51983-52002 | None:intergenic | 25.0% |
| ! | TTACAATAGCCTCTTAAAAT+GGG | - | tig0022711:52009-52028 | Msa1401550:intron | 25.0% |
| ! | AAGATTAACTATAAAACAGC+AGG | + | tig0022711:52142-52161 | None:intergenic | 25.0% |
| ! | TGATCAATTTCTGATAAATG+AGG | - | tig0022711:52215-52234 | Msa1401550:intron | 25.0% |
| ! | AAACTTGAATGTTTACTTGT+GGG | - | tig0022711:52352-52371 | Msa1401550:CDS | 25.0% |
| !!! | CTTGAGTTTTTTGAACAAAT+AGG | - | tig0022711:52435-52454 | Msa1401550:intron | 25.0% |
| ! | GTATGTTATTCAATCACATT+CGG | - | tig0022711:52639-52658 | Msa1401550:CDS | 25.0% |
| ! | ACTGATCTAATATCAAATCT+AGG | + | tig0022711:53303-53322 | None:intergenic | 25.0% |
| !! | CGTCTTTTCAAAATATTTTC+TGG | - | tig0022711:53415-53434 | Msa1401550:CDS | 25.0% |
| !! | TGATATCTTGATTGTTTCTT+CGG | - | tig0022711:53438-53457 | Msa1401550:CDS | 25.0% |
| ! | CTTCAAATCTTAAAAGAGAT+AGG | + | tig0022711:53845-53864 | None:intergenic | 25.0% |
| !!! | ATATTTTTGGTGAAATCTCT+AGG | - | tig0022711:53931-53950 | Msa1401550:CDS | 25.0% |
| !!! | TATTTTTGGTGAAATCTCTA+GGG | - | tig0022711:53932-53951 | Msa1401550:CDS | 25.0% |
| ! | ATAGTCTATAATAGTGCATT+TGG | - | tig0022711:54201-54220 | Msa1401550:intron | 25.0% |
| ! | TGGATCATCAATCAATTAAA+AGG | + | tig0022711:54562-54581 | None:intergenic | 25.0% |
| !!! | TTTATATGCTAATGGATTGT+TGG | + | tig0022711:54688-54707 | None:intergenic | 25.0% |
| ! | ATCCATTAGCATATAAATTC+AGG | - | tig0022711:54691-54710 | Msa1401550:intron | 25.0% |
| ! | TACCTGAATTTATATGCTAA+TGG | + | tig0022711:54696-54715 | None:intergenic | 25.0% |
| !!! | TTCTAAAGTTCACTAACTTT+TGG | - | tig0022711:54755-54774 | Msa1401550:intron | 25.0% |
| !! | ATTCTCTATTCCTTCTTTTA+AGG | - | tig0022711:55139-55158 | Msa1401550:CDS | 25.0% |
| !! | TTCTCTATTCCTTCTTTTAA+GGG | - | tig0022711:55140-55159 | Msa1401550:CDS | 25.0% |
| !! | ATAACCTTTATTTATTGGAC+AGG | - | tig0022711:55329-55348 | Msa1401550:intron | 25.0% |
| ! | TATGGAGATTTATATGGAAT+AGG | - | tig0022711:55443-55462 | Msa1401550:intron | 25.0% |
| ! | TATAAATCATGCCTTCATAA+CGG | + | tig0022711:55502-55521 | None:intergenic | 25.0% |
| !!! | GATTAAACAAGTTTTAGAGA+AGG | + | tig0022711:55541-55560 | None:intergenic | 25.0% |
| ! | AATCTACATCAGTCTATATT+TGG | - | tig0022711:55557-55576 | Msa1401550:CDS | 25.0% |
| !! | TATTCTCTCATGTAGATTTT+TGG | - | tig0022711:55990-56009 | Msa1401550:intron | 25.0% |
| !! | ATTCTCTCATGTAGATTTTT+GGG | - | tig0022711:55991-56010 | Msa1401550:intron | 25.0% |
| !! | TTTGCAATATTTAGTTCCTA+AGG | + | tig0022711:56169-56188 | None:intergenic | 25.0% |
| ! | TATACAATAGACAGAAATGA+AGG | + | tig0022711:56586-56605 | None:intergenic | 25.0% |
| !! | ATTCACAAACAGTTTTTACT+TGG | + | tig0022711:56618-56637 | None:intergenic | 25.0% |
| ! | AAAAACTGTTTGTGAATTTG+TGG | - | tig0022711:56621-56640 | Msa1401550:CDS | 25.0% |
| !! | AGTAATGATTTGTAATTCTG+TGG | + | tig0022711:56856-56875 | None:intergenic | 25.0% |
| !!! | TTTAAACCAAGATTTTTAGG+AGG | - | tig0022711:56911-56930 | Msa1401550:intron | 25.0% |
| !!! | TTAAACCAAGATTTTTAGGA+GGG | - | tig0022711:56912-56931 | Msa1401550:intron | 25.0% |
| ! | CGTCATAAATGAAAAAAAAG+GGG | + | tig0022711:57087-57106 | None:intergenic | 25.0% |
| ! | GTCGTCATAAATGAAAAAAA+AGG | + | tig0022711:57089-57108 | None:intergenic | 25.0% |
| !! | TTTTGCAAATGCTTATTTGT+GGG | - | tig0022711:57272-57291 | Msa1401550:CDS | 25.0% |
| !!! | GTAATTTTTATGTTTGAAGC+TGG | - | tig0022711:57359-57378 | Msa1401550:CDS | 25.0% |
| TGATGAATTCTCTTAGTAGA+AGG | + | tig0022711:48455-48474 | None:intergenic | 30.0% | |
| GTAATTAGTATGAAGAAAGG+AGG | + | tig0022711:48575-48594 | None:intergenic | 30.0% | |
| CAAAAACAATACGTTGAAAG+AGG | + | tig0022711:48694-48713 | None:intergenic | 30.0% | |
| GAATTGATTGTTGGAGAAAA+TGG | - | tig0022711:49035-49054 | Msa1401550:CDS | 30.0% | |
| ! | AATTCTATTGAAGGCATATC+CGG | + | tig0022711:49593-49612 | None:intergenic | 30.0% |
| TATGCCTTCAATAGAATTGT+CGG | - | tig0022711:49595-49614 | Msa1401550:intron | 30.0% | |
| ACCATTAGTTCATGAATACA+GGG | + | tig0022711:49721-49740 | None:intergenic | 30.0% | |
| AACCATTAGTTCATGAATAC+AGG | + | tig0022711:49722-49741 | None:intergenic | 30.0% | |
| TGTAGTTCACTTAGTTTAGA+TGG | + | tig0022711:49877-49896 | None:intergenic | 30.0% | |
| ACTAAGTGAACTACATAAGA+TGG | - | tig0022711:49882-49901 | Msa1401550:CDS | 30.0% | |
| TAACTTTAAGCAATTTGGCA+TGG | + | tig0022711:49999-50018 | None:intergenic | 30.0% | |
| GTTAAGTGATTCGAAATAGA+AGG | - | tig0022711:50015-50034 | Msa1401550:CDS | 30.0% | |
| ACTTTGTCAAACACTTTCAT+GGG | + | tig0022711:50176-50195 | None:intergenic | 30.0% | |
| ATTAGATACAACTTAGCAAG+AGG | + | tig0022711:50264-50283 | None:intergenic | 30.0% | |
| AAATTGGAGTGTAATGTTCA+GGG | + | tig0022711:50330-50349 | None:intergenic | 30.0% | |
| AAAATTGGAGTGTAATGTTC+AGG | + | tig0022711:50331-50350 | None:intergenic | 30.0% | |
| ATCTGCTTATAGCTTAACAA+CGG | + | tig0022711:50613-50632 | None:intergenic | 30.0% | |
| ! | GCAGATATAACTTGTGATAT+AGG | - | tig0022711:50673-50692 | Msa1401550:CDS | 30.0% |
| ! | GATATAACTTGTGATATAGG+TGG | - | tig0022711:50676-50695 | Msa1401550:CDS | 30.0% |
| ACATTTGCATGTGTAAGAAA+GGG | - | tig0022711:50985-51004 | Msa1401550:intron | 30.0% | |
| !! | TCAAGAAGTGTCCATATATT+AGG | - | tig0022711:51077-51096 | Msa1401550:CDS | 30.0% |
| AAATGCACCAACATAAATGT+AGG | - | tig0022711:51105-51124 | Msa1401550:CDS | 30.0% | |
| TATAGAGCCTACATTTATGT+TGG | + | tig0022711:51115-51134 | None:intergenic | 30.0% | |
| ! | AAGACTGAATAGTCTCATTT+TGG | - | tig0022711:51252-51271 | Msa1401550:intron | 30.0% |
| ACTATGACAGTCTTTATATC+AGG | - | tig0022711:51310-51329 | Msa1401550:intron | 30.0% | |
| AGTGATTCATAGATCAAAAG+AGG | + | tig0022711:51372-51391 | None:intergenic | 30.0% | |
| ATGAATCACTGACATAAGTA+CGG | - | tig0022711:51382-51401 | Msa1401550:intron | 30.0% | |
| AGCCAAATTTGTGACAAATT+GGG | + | tig0022711:51745-51764 | None:intergenic | 30.0% | |
| AAGCCAAATTTGTGACAAAT+TGG | + | tig0022711:51746-51765 | None:intergenic | 30.0% | |
| GCGTGGTATATAATCATATA+AGG | + | tig0022711:51841-51860 | None:intergenic | 30.0% | |
| ! | ACCCTTTTCTTTCAATTTGT+TGG | - | tig0022711:51949-51968 | Msa1401550:intron | 30.0% |
| TTTAAGAGGCTATTGTAAGT+GGG | + | tig0022711:52007-52026 | None:intergenic | 30.0% | |
| !! | TTTTAAGAGGCTATTGTAAG+TGG | + | tig0022711:52008-52027 | None:intergenic | 30.0% |
| CTTACAATAGCCTCTTAAAA+TGG | - | tig0022711:52008-52027 | Msa1401550:intron | 30.0% | |
| TGCAGCTTCAATAATATCTA+GGG | + | tig0022711:52241-52260 | None:intergenic | 30.0% | |
| CAAACTTGAATGTTTACTTG+TGG | - | tig0022711:52351-52370 | Msa1401550:CDS | 30.0% | |
| CTATTATCATGTATTCCTTC+AGG | + | tig0022711:52558-52577 | None:intergenic | 30.0% | |
| CTGAAGGAATACATGATAAT+AGG | - | tig0022711:52556-52575 | Msa1401550:CDS | 30.0% | |
| AAATTGCAGTGTATTCAGAA+TGG | + | tig0022711:52617-52636 | None:intergenic | 30.0% | |
| AATTCAAGCATGGTTATTGT+GGG | - | tig0022711:52703-52722 | Msa1401550:CDS | 30.0% | |
| AGTAAAATTTCACTTACGCT+TGG | - | tig0022711:52986-53005 | Msa1401550:intron | 30.0% | |
| CTTGGTAAAGTTCATGAAAA+CGG | - | tig0022711:53004-53023 | Msa1401550:intron | 30.0% | |
| ! | CCAACAATGTTTTATACCAT+TGG | + | tig0022711:53135-53154 | None:intergenic | 30.0% |
| CCAATGGTATAAAACATTGT+TGG | - | tig0022711:53132-53151 | Msa1401550:intron | 30.0% | |
| ! | ATATCAAATCTAGGATCCTT+AGG | + | tig0022711:53294-53313 | None:intergenic | 30.0% |
| TGAAATGCTCTTAAAAAGAC+TGG | + | tig0022711:53385-53404 | None:intergenic | 30.0% | |
| !!! | TCTTTTTAAGAGCATTTCAC+AGG | - | tig0022711:53386-53405 | Msa1401550:intron | 30.0% |
| TCAGCATTAACACATGATAA+GGG | + | tig0022711:53491-53510 | None:intergenic | 30.0% | |
| ATCAGCATTAACACATGATA+AGG | + | tig0022711:53492-53511 | None:intergenic | 30.0% | |
| AAAAAACTATGCTGGAAGAT+GGG | + | tig0022711:53522-53541 | None:intergenic | 30.0% | |
| AAAAAAACTATGCTGGAAGA+TGG | + | tig0022711:53523-53542 | None:intergenic | 30.0% | |
| ! | TTTTTGTTCTCGTATTTTGC+AGG | - | tig0022711:53592-53611 | Msa1401550:intron | 30.0% |
| CTAGAATAGATTGAAGACTA+TGG | - | tig0022711:53787-53806 | Msa1401550:intron | 30.0% | |
| TAGATTGAAGACTATGGTAA+TGG | - | tig0022711:53793-53812 | Msa1401550:intron | 30.0% | |
| AATCAGAGAACTAAAGAAGT+GGG | + | tig0022711:53899-53918 | None:intergenic | 30.0% | |
| AAATCAGAGAACTAAAGAAG+TGG | + | tig0022711:53900-53919 | None:intergenic | 30.0% | |
| !!! | ATTTTTGGTGAAATCTCTAG+GGG | - | tig0022711:53933-53952 | Msa1401550:CDS | 30.0% |
| TATAACAATTCTTGGTGAGA+TGG | - | tig0022711:54104-54123 | Msa1401550:intron | 30.0% | |
| ATAACAATTCTTGGTGAGAT+GGG | - | tig0022711:54105-54124 | Msa1401550:intron | 30.0% | |
| ATATCAGAATAGGTCATACT+AGG | + | tig0022711:54154-54173 | None:intergenic | 30.0% | |
| ! | TATAGACTATTTTATGCTCC+TGG | + | tig0022711:54191-54210 | None:intergenic | 30.0% |
| AGCATATAAATTCAGGTACT+TGG | - | tig0022711:54698-54717 | Msa1401550:intron | 30.0% | |
| ATGTTAAGACCCTTAAAAGA+AGG | + | tig0022711:55152-55171 | None:intergenic | 30.0% | |
| CTTCAAGAAAATGTTACACA+TGG | + | tig0022711:55291-55310 | None:intergenic | 30.0% | |
| GTTTCCTGTCCAATAAATAA+AGG | + | tig0022711:55336-55355 | None:intergenic | 30.0% | |
| ATGATTCAGCTAAAAGACTA+AGG | - | tig0022711:55363-55382 | Msa1401550:CDS | 30.0% | |
| TAAATTAAAGAGTTGCGGTT+TGG | + | tig0022711:55425-55444 | None:intergenic | 30.0% | |
| ! | AACCGCAACTCTTTAATTTA+TGG | - | tig0022711:55425-55444 | Msa1401550:intron | 30.0% |
| CTCCATAAATTAAAGAGTTG+CGG | + | tig0022711:55430-55449 | None:intergenic | 30.0% | |
| !!! | TTTTTAGCTACTCCATGTAT+AGG | - | tig0022711:55670-55689 | Msa1401550:intron | 30.0% |
| !! | TTTTAGCTACTCCATGTATA+GGG | - | tig0022711:55671-55690 | Msa1401550:intron | 30.0% |
| !! | AACATGAATTTTCTGAAGGT+TGG | + | tig0022711:55778-55797 | None:intergenic | 30.0% |
| ! | GTCAAACATGAATTTTCTGA+AGG | + | tig0022711:55782-55801 | None:intergenic | 30.0% |
| !!! | TGGAAAATCACTGTTTTAAC+CGG | - | tig0022711:55963-55982 | Msa1401550:intron | 30.0% |
| ! | GTAATATACCTTTTCTGTGT+TGG | + | tig0022711:56103-56122 | None:intergenic | 30.0% |
| ! | AGTTGTTTCATCGGTATTTA+AGG | + | tig0022711:56310-56329 | None:intergenic | 30.0% |
| ! | CTGCAAATAAGTTGTTTCAT+CGG | + | tig0022711:56319-56338 | None:intergenic | 30.0% |
| ! | CTTATATCTGATTTGTAAGC+AGG | - | tig0022711:56391-56410 | Msa1401550:CDS | 30.0% |
| ACAAACAAAATTCAGACAAG+AGG | - | tig0022711:56674-56693 | Msa1401550:CDS | 30.0% | |
| CAAAAAATGACTAGCATACT+TGG | - | tig0022711:56826-56845 | Msa1401550:intron | 30.0% | |
| ! | ATGATTTGTAATTCTGTGGT+TGG | + | tig0022711:56852-56871 | None:intergenic | 30.0% |
| AAACAACTCAAGACTATTCT+CGG | + | tig0022711:57189-57208 | None:intergenic | 30.0% | |
| ! | CTTTTGCAAATGCTTATTTG+TGG | - | tig0022711:57271-57290 | Msa1401550:CDS | 30.0% |
| CTGGATATTATACAAGCTTA+TGG | - | tig0022711:57312-57331 | Msa1401550:CDS | 30.0% | |
| TGACAAATGAAAAAGATCCT+AGG | + | tig0022711:57561-57580 | None:intergenic | 30.0% | |
| TATTCACAAGTCACAACACA+AGG | - | tig0022711:48163-48182 | Msa1401550:three_prime_UTR | 35.0% | |
| ACAACACAAGGATTCATTTC+TGG | - | tig0022711:48175-48194 | Msa1401550:three_prime_UTR | 35.0% | |
| AAGAACACGTGATTCTTACA+AGG | + | tig0022711:48216-48235 | None:intergenic | 35.0% | |
| ATTGAGGTTTGAGAAGTAAG+AGG | - | tig0022711:48294-48313 | Msa1401550:three_prime_UTR | 35.0% | |
| AGAAGTAAGAGGAAGATGTT+TGG | - | tig0022711:48305-48324 | Msa1401550:three_prime_UTR | 35.0% | |
| GAAGTAAGAGGAAGATGTTT+GGG | - | tig0022711:48306-48325 | Msa1401550:three_prime_UTR | 35.0% | |
| TGTGCTAGATTACTTCATCA+TGG | - | tig0022711:48401-48420 | Msa1401550:CDS | 35.0% | |
| AGATTACTTCATCATGGAAC+TGG | - | tig0022711:48407-48426 | Msa1401550:CDS | 35.0% | |
| ! | AAGAAGGCATAAGCTCTATT+TGG | + | tig0022711:48836-48855 | None:intergenic | 35.0% |
| GGGAAAAGATTACTTGCATT+TGG | - | tig0022711:49056-49075 | Msa1401550:CDS | 35.0% | |
| ! | CTTGCATTTGGAAATTTTGC+TGG | - | tig0022711:49068-49087 | Msa1401550:intron | 35.0% |
| ! | ATTGATTTCTTGCGTGGATT+GGG | - | tig0022711:49104-49123 | Msa1401550:intron | 35.0% |
| ! | GTAACAGGGTATTTAAGTCT+TGG | - | tig0022711:49243-49262 | Msa1401550:CDS | 35.0% |
| ATCATACATGTATCCTTCCT+TGG | - | tig0022711:49296-49315 | Msa1401550:CDS | 35.0% | |
| AACACCGACAATTCTATTGA+AGG | + | tig0022711:49602-49621 | None:intergenic | 35.0% | |
| TCCCTGTATTCATGAACTAA+TGG | - | tig0022711:49717-49736 | Msa1401550:CDS | 35.0% | |
| ! | AGATGGATCCACAAAAGTAT+GGG | + | tig0022711:49860-49879 | None:intergenic | 35.0% |
| TAGATGGATCCACAAAAGTA+TGG | + | tig0022711:49861-49880 | None:intergenic | 35.0% | |
| GTAAATATATGGCGAAGTTC+AGG | + | tig0022711:50051-50070 | None:intergenic | 35.0% | |
| AACAGGAAACTAATCAAGCA+AGG | - | tig0022711:50078-50097 | Msa1401550:intron | 35.0% | |
| TCACAACACAACCATAAACT+TGG | + | tig0022711:50124-50143 | None:intergenic | 35.0% | |
| AACACTTTCATGGGATCTTT+GGG | + | tig0022711:50167-50186 | None:intergenic | 35.0% | |
| AAACACTTTCATGGGATCTT+TGG | + | tig0022711:50168-50187 | None:intergenic | 35.0% | |
| CACTTTGTCAAACACTTTCA+TGG | + | tig0022711:50177-50196 | None:intergenic | 35.0% | |
| ATTGGAGATTCCAAAACTCA+AGG | + | tig0022711:50215-50234 | None:intergenic | 35.0% | |
| TCTAATATGCTAACCTGATG+TGG | - | tig0022711:50278-50297 | Msa1401550:CDS | 35.0% | |
| ! | TAACCTGATGTGGTTATTTC+AGG | - | tig0022711:50288-50307 | Msa1401550:CDS | 35.0% |
| !!! | TGTCTGGTGCTATTTTTTCA+TGG | + | tig0022711:50354-50373 | None:intergenic | 35.0% |
| ATTGCATGTATTGGGAGAAA+AGG | - | tig0022711:50581-50600 | Msa1401550:intron | 35.0% | |
| ATATCTGCTATTCCAACAAG+TGG | + | tig0022711:50661-50680 | None:intergenic | 35.0% | |
| TATGGTGTATACCTGAAGAA+GGG | + | tig0022711:50742-50761 | None:intergenic | 35.0% | |
| ATATGGTGTATACCTGAAGA+AGG | + | tig0022711:50743-50762 | None:intergenic | 35.0% | |
| ATACACCATATCCACTTGTT+TGG | - | tig0022711:50752-50771 | Msa1401550:intron | 35.0% | |
| TAATAACCTCTCCAAACAAG+TGG | + | tig0022711:50766-50785 | None:intergenic | 35.0% | |
| TTACACATGCAAATGTCTGT+AGG | + | tig0022711:50981-51000 | None:intergenic | 35.0% | |
| GACATTTGCATGTGTAAGAA+AGG | - | tig0022711:50984-51003 | Msa1401550:intron | 35.0% | |
| CATTTGCATGTGTAAGAAAG+GGG | - | tig0022711:50986-51005 | Msa1401550:intron | 35.0% | |
| ! | GCTCAATTTTTATGAAAGGG+TGG | + | tig0022711:51151-51170 | None:intergenic | 35.0% |
| !! | GGAATCTAATTTGGTTTGCT+AGG | + | tig0022711:51351-51370 | None:intergenic | 35.0% |
| TCCAACAGAATTTGCAAAAG+AGG | - | tig0022711:51607-51626 | Msa1401550:CDS | 35.0% | |
| ! | ACCTCTTTTGCAAATTCTGT+TGG | + | tig0022711:51611-51630 | None:intergenic | 35.0% |
| TAAGTGTCTTGTACATCCAT+TGG | - | tig0022711:51630-51649 | Msa1401550:CDS | 35.0% | |
| ACATCCATTGGATAAGAGAA+TGG | - | tig0022711:51642-51661 | Msa1401550:CDS | 35.0% | |
| ATAGCCATTCTCTTATCCAA+TGG | + | tig0022711:51649-51668 | None:intergenic | 35.0% | |
| GATAAGAGAATGGCTATAAC+AGG | - | tig0022711:51652-51671 | Msa1401550:CDS | 35.0% | |
| GTCCCAATTTGTCACAAATT+TGG | - | tig0022711:51740-51759 | Msa1401550:intron | 35.0% | |
| CAAGAGCAAATACAAGACAT+CGG | - | tig0022711:52075-52094 | Msa1401550:CDS | 35.0% | |
| CTGCAGCTTCAATAATATCT+AGG | + | tig0022711:52242-52261 | None:intergenic | 35.0% | |
| CTAGATATTATTGAAGCTGC+AGG | - | tig0022711:52240-52259 | Msa1401550:intron | 35.0% | |
| TCATGTATTCCTTCAGGTAT+GGG | + | tig0022711:52552-52571 | None:intergenic | 35.0% | |
| ATCATGTATTCCTTCAGGTA+TGG | + | tig0022711:52553-52572 | None:intergenic | 35.0% | |
| CCAATAAGAAATTGTGAGTG+AGG | + | tig0022711:52594-52613 | None:intergenic | 35.0% | |
| CCTCACTCACAATTTCTTAT+TGG | - | tig0022711:52591-52610 | Msa1401550:CDS | 35.0% | |
| CACAATAACCATGCTTGAAT+TGG | + | tig0022711:52704-52723 | None:intergenic | 35.0% | |
| CAATTCAAGCATGGTTATTG+TGG | - | tig0022711:52702-52721 | Msa1401550:CDS | 35.0% | |
| ! | CAACAAGCTATGTTTTCAAC+AGG | - | tig0022711:52865-52884 | Msa1401550:intron | 35.0% |
| ! | AAGCTATGTTTTCAACAGGT+TGG | - | tig0022711:52869-52888 | Msa1401550:intron | 35.0% |
| TAAAGTTCATGAAAACGGCA+TGG | - | tig0022711:53009-53028 | Msa1401550:intron | 35.0% | |
| GGAATCTGATCCAAAAAAGA+AGG | - | tig0022711:53036-53055 | Msa1401550:intron | 35.0% | |
| !!! | AAAACTGCAGCCTTCTTTTT+TGG | + | tig0022711:53049-53068 | None:intergenic | 35.0% |
| GCTCAAATGCTATCATCATT+TGG | - | tig0022711:53103-53122 | Msa1401550:intron | 35.0% | |
| ! | CAATGTTTTATACCATTGGC+TGG | + | tig0022711:53131-53150 | None:intergenic | 35.0% |
| ! | GCAGAACTAGTATTTTCCTA+AGG | - | tig0022711:53275-53294 | Msa1401550:intron | 35.0% |
| AGCTGAATTCCAGTTACATT+TGG | + | tig0022711:53345-53364 | None:intergenic | 35.0% | |
| CACATGATAAGGGTTCAATA+AGG | + | tig0022711:53481-53500 | None:intergenic | 35.0% | |
| AAAAACTATGCTGGAAGATG+GGG | + | tig0022711:53521-53540 | None:intergenic | 35.0% | |
| TACGATAATGTGACAACTAG+GGG | + | tig0022711:53642-53661 | None:intergenic | 35.0% | |
| CTACGATAATGTGACAACTA+GGG | + | tig0022711:53643-53662 | None:intergenic | 35.0% | |
| !! | TTTAGCCTTATCATCTAGCA+TGG | + | tig0022711:54076-54095 | None:intergenic | 35.0% |
| GATGCTGGTATAACAATTCT+TGG | - | tig0022711:54096-54115 | Msa1401550:intron | 35.0% | |
| TGCATGTGCTTATATTCTAG+CGG | - | tig0022711:54318-54337 | Msa1401550:intron | 35.0% | |
| ! | TTATTTTCATCCCGACACAT+TGG | - | tig0022711:54468-54487 | Msa1401550:intron | 35.0% |
| TTATTAGAAGACCTGTTGGT+TGG | + | tig0022711:54539-54558 | None:intergenic | 35.0% | |
| AAGGTTATTAGAAGACCTGT+TGG | + | tig0022711:54543-54562 | None:intergenic | 35.0% | |
| GCCATAAATGTAACAAGTAC+CGG | + | tig0022711:54792-54811 | None:intergenic | 35.0% | |
| !!! | CACAAGTGATGCTTTTTCAA+GGG | + | tig0022711:54836-54855 | None:intergenic | 35.0% |
| CAACAAGATGAAACAGTAAC+AGG | + | tig0022711:54940-54959 | None:intergenic | 35.0% | |
| CTGTTACTGTTTCATCTTGT+TGG | - | tig0022711:54938-54957 | Msa1401550:intron | 35.0% | |
| TCTTGTTGGCATTGCTATAA+TGG | - | tig0022711:54952-54971 | Msa1401550:intron | 35.0% | |
| CATTGCTATAATGGCTCATT+TGG | - | tig0022711:54961-54980 | Msa1401550:intron | 35.0% | |
| AGGATTCCAGCTGAAATAAT+TGG | + | tig0022711:54990-55009 | None:intergenic | 35.0% | |
| GGCGAAACTTTACATATTGA+TGG | - | tig0022711:55058-55077 | Msa1401550:CDS | 35.0% | |
| TTTACCGTCAATAACATGCA+CGG | - | tig0022711:55196-55215 | Msa1401550:intron | 35.0% | |
| AATTCCGTGCATGTTATTGA+CGG | + | tig0022711:55203-55222 | None:intergenic | 35.0% | |
| GGAATGAGACTCATTCAATA+TGG | + | tig0022711:55270-55289 | None:intergenic | 35.0% | |
| ATACTCAAACACACAAAACC+TGG | + | tig0022711:55625-55644 | None:intergenic | 35.0% | |
| ATCTCACTAAACCCTATACA+TGG | + | tig0022711:55685-55704 | None:intergenic | 35.0% | |
| TATAGGGTTTAGTGAGATCA+TGG | - | tig0022711:55687-55706 | Msa1401550:intron | 35.0% | |
| TCGGAAAGGATATTAACACT+AGG | - | tig0022711:55859-55878 | Msa1401550:CDS | 35.0% | |
| GACAGCAAAAACAATCATGT+AGG | - | tig0022711:55912-55931 | Msa1401550:intron | 35.0% | |
| !! | CATACTAAGAGAGTGTTGAA+TGG | + | tig0022711:55938-55957 | None:intergenic | 35.0% |
| CATTCAACACTCTCTTAGTA+TGG | - | tig0022711:55936-55955 | Msa1401550:intron | 35.0% | |
| CACTCTCTTAGTATGGTTAT+TGG | - | tig0022711:55943-55962 | Msa1401550:intron | 35.0% | |
| CGATGAAACAACTTATTTGC+AGG | - | tig0022711:56317-56336 | Msa1401550:intron | 35.0% | |
| TTATTTGCAGGAATGTGAAG+AGG | - | tig0022711:56329-56348 | Msa1401550:CDS | 35.0% | |
| ! | TCTGATTTGTAAGCAGGATA+TGG | - | tig0022711:56397-56416 | Msa1401550:CDS | 35.0% |
| !! | TCTCTGTAATTTTGCTGTCT+GGG | + | tig0022711:56454-56473 | None:intergenic | 35.0% |
| !! | TTCTCTGTAATTTTGCTGTC+TGG | + | tig0022711:56455-56474 | None:intergenic | 35.0% |
| ! | AGAGCTACTTTGCTTGAATT+CGG | - | tig0022711:56479-56498 | Msa1401550:intron | 35.0% |
| GAATTCGGGAAAACTATTGA+TGG | - | tig0022711:56494-56513 | Msa1401550:intron | 35.0% | |
| AAATATAACATGCAGTCACC+TGG | + | tig0022711:56734-56753 | None:intergenic | 35.0% | |
| ! | TGGCATGCACATTTGTTAAA+AGG | - | tig0022711:56789-56808 | Msa1401550:intron | 35.0% |
| !!! | GTATGCTAGTCATTTTTTGC+TGG | + | tig0022711:56825-56844 | None:intergenic | 35.0% |
| TTTCTCCCTCCTAAAAATCT+TGG | + | tig0022711:56920-56939 | None:intergenic | 35.0% | |
| GAATAACACGCAGAAAACAA+TGG | + | tig0022711:56979-56998 | None:intergenic | 35.0% | |
| !! | TCTGCGTGTTATTCTCTTTT+AGG | - | tig0022711:56985-57004 | Msa1401550:intron | 35.0% |
| ! | AAATGCTTATTTGTGGGTTG+TGG | - | tig0022711:57278-57297 | Msa1401550:CDS | 35.0% |
| ACTCAAAAGAGGTTTGGATT+TGG | + | tig0022711:57538-57557 | None:intergenic | 35.0% | |
| AAGAGGAAGATGTTTGGGAA+CGG | - | tig0022711:48311-48330 | Msa1401550:three_prime_UTR | 40.0% | |
| AGTAATCTAGCACAGTGTGA+TGG | + | tig0022711:48395-48414 | None:intergenic | 40.0% | |
| GATGCTCTCTATGAAGAAGT+TGG | - | tig0022711:48476-48495 | Msa1401550:intron | 40.0% | |
| !! | TTTTGTTGTACGCACTGATC+AGG | - | tig0022711:48709-48728 | Msa1401550:intron | 40.0% |
| CTTGTGAGTATGGGAAAAGA+AGG | + | tig0022711:48852-48871 | None:intergenic | 40.0% | |
| ! | CTTCTTTTCCCATACTCACA+AGG | - | tig0022711:48850-48869 | Msa1401550:intron | 40.0% |
| TTTCTGTGCCTTGTGAGTAT+GGG | + | tig0022711:48861-48880 | None:intergenic | 40.0% | |
| GAAAGAAAACATGCCTTTGC+TGG | - | tig0022711:48877-48896 | Msa1401550:intron | 40.0% | |
| AAACATGCCTTTGCTGGATA+AGG | - | tig0022711:48883-48902 | Msa1401550:intron | 40.0% | |
| CTCAGCTAGAATCTACAACA+AGG | + | tig0022711:48994-49013 | None:intergenic | 40.0% | |
| ! | GGAATGATTGATTTCTTGCG+TGG | - | tig0022711:49098-49117 | Msa1401550:intron | 40.0% |
| ! | GATTGATTTCTTGCGTGGAT+TGG | - | tig0022711:49103-49122 | Msa1401550:intron | 40.0% |
| ! | TCAACACCTTTTCTGTCACT+TGG | - | tig0022711:49270-49289 | Msa1401550:CDS | 40.0% |
| GATGATCCAAGTGACAGAAA+AGG | + | tig0022711:49279-49298 | None:intergenic | 40.0% | |
| TGGTGAAGAAATTGCAACTC+AGG | - | tig0022711:49347-49366 | Msa1401550:intron | 40.0% | |
| GGTGAAGAAATTGCAACTCA+GGG | - | tig0022711:49348-49367 | Msa1401550:intron | 40.0% | |
| CCAGTAAAGACAAAAACGAG+AGG | + | tig0022711:49393-49412 | None:intergenic | 40.0% | |
| !! | CCTCTCGTTTTTGTCTTTAC+TGG | - | tig0022711:49390-49409 | Msa1401550:intron | 40.0% |
| !! | CGTTTTTGTCTTTACTGGCT+CGG | - | tig0022711:49395-49414 | Msa1401550:intron | 40.0% |
| !!! | GTTTTTGTCTTTACTGGCTC+GGG | - | tig0022711:49396-49415 | Msa1401550:intron | 40.0% |
| TTGTCAATGCTTCGTCTACA+AGG | + | tig0022711:49448-49467 | None:intergenic | 40.0% | |
| !!! | TACATGCATCGATTTTGTGC+TGG | - | tig0022711:49543-49562 | Msa1401550:intron | 40.0% |
| !! | TCCTTTCTTGTAGTTTGCTC+TGG | - | tig0022711:49808-49827 | Msa1401550:intron | 40.0% |
| ACCAGAGCAAACTACAAGAA+AGG | + | tig0022711:49812-49831 | None:intergenic | 40.0% | |
| ! | GATGGATCCACAAAAGTATG+GGG | + | tig0022711:49859-49878 | None:intergenic | 40.0% |
| GAAACTAATCAAGCAAGGCA+TGG | - | tig0022711:50083-50102 | Msa1401550:intron | 40.0% | |
| TGTTGTGATAGCTCAAGACA+TGG | - | tig0022711:50136-50155 | Msa1401550:intron | 40.0% | |
| CTACCTGAAATAACCACATC+AGG | + | tig0022711:50294-50313 | None:intergenic | 40.0% | |
| CCGATATCACCTACCAATAA+CGG | + | tig0022711:50380-50399 | None:intergenic | 40.0% | |
| CCGTTATTGGTAGGTGATAT+CGG | - | tig0022711:50377-50396 | Msa1401550:intron | 40.0% | |
| CCAAGAATAGTAATGCAGCA+TGG | + | tig0022711:50429-50448 | None:intergenic | 40.0% | |
| CCATGCTGCATTACTATTCT+TGG | - | tig0022711:50426-50445 | Msa1401550:intron | 40.0% | |
| CAAGCACTATGACTGACATT+TGG | - | tig0022711:50546-50565 | Msa1401550:intron | 40.0% | |
| TGCTTATAGCTTAACAACGG+AGG | + | tig0022711:50610-50629 | None:intergenic | 40.0% | |
| AGAAATGGATGTCCACTTGT+TGG | - | tig0022711:50646-50665 | Msa1401550:intron | 40.0% | |
| GTGAATCAATTGACGTAGTG+CGG | + | tig0022711:50720-50739 | None:intergenic | 40.0% | |
| ! | CAATTGATTCACCCTTCTTC+AGG | - | tig0022711:50728-50747 | Msa1401550:intron | 40.0% |
| TATACGCGCTACTTCTACAA+TGG | - | tig0022711:50800-50819 | Msa1401550:intron | 40.0% | |
| TGCAAATGTCTGTAGGAGTA+TGG | + | tig0022711:50974-50993 | None:intergenic | 40.0% | |
| ! | ATGGGCTTTTCATGTCTTGT+AGG | + | tig0022711:51212-51231 | None:intergenic | 40.0% |
| !! | GAATAGTCTCATTTTGGCGA+TGG | - | tig0022711:51258-51277 | Msa1401550:intron | 40.0% |
| CAACATCATATATGGGACAC+CGG | + | tig0022711:51494-51513 | None:intergenic | 40.0% | |
| ! | GACTAGGCTTCGCAATATTT+TGG | - | tig0022711:51708-51727 | Msa1401550:intron | 40.0% |
| CAAACTTGCCTGCTCATTTA+AGG | - | tig0022711:51781-51800 | Msa1401550:intron | 40.0% | |
| GATATTATTGAAGCTGCAGG+AGG | - | tig0022711:52243-52262 | Msa1401550:intron | 40.0% | |
| ATGACAGTTAACCAAGTGGA+AGG | + | tig0022711:52271-52290 | None:intergenic | 40.0% | |
| CACTTGGTTAACTGTCATGT+GGG | - | tig0022711:52273-52292 | Msa1401550:intron | 40.0% | |
| ATCCCATTCTGAATTTGCCT+TGG | + | tig0022711:52729-52748 | None:intergenic | 40.0% | |
| AAGGCAAATTCAGAATGGGA+TGG | - | tig0022711:52728-52747 | Msa1401550:CDS | 40.0% | |
| !! | CCAAAGAGTATCAAGCCAAA+TGG | + | tig0022711:52755-52774 | None:intergenic | 40.0% |
| !! | CCATTTGGCTTGATACTCTT+TGG | - | tig0022711:52752-52771 | Msa1401550:CDS | 40.0% |
| !! | TTCAGTTGGATTAGCAAGAG+AGG | + | tig0022711:52939-52958 | None:intergenic | 40.0% |
| !!! | AAGGCTGCAGTTTTGATTCT+TGG | - | tig0022711:53055-53074 | Msa1401550:intron | 40.0% |
| !!! | AGGCTGCAGTTTTGATTCTT+GGG | - | tig0022711:53056-53075 | Msa1401550:intron | 40.0% |
| ! | TTTGGGATCTTTGTACCTGA+AGG | - | tig0022711:53192-53211 | Msa1401550:intron | 40.0% |
| AGATCAGTGCAGATTGTTGA+AGG | - | tig0022711:53315-53334 | Msa1401550:intron | 40.0% | |
| !! | GAAGGCATTCCAAATGTAAC+TGG | - | tig0022711:53333-53352 | Msa1401550:intron | 40.0% |
| TGGAATTCAGCTTGATGTGA+TGG | - | tig0022711:53353-53372 | Msa1401550:intron | 40.0% | |
| ! | TTGTTCTCGTATTTTGCAGG+TGG | - | tig0022711:53595-53614 | Msa1401550:intron | 40.0% |
| ACGATAATGTGACAACTAGG+GGG | + | tig0022711:53641-53660 | None:intergenic | 40.0% | |
| GCTACGATAATGTGACAACT+AGG | + | tig0022711:53644-53663 | None:intergenic | 40.0% | |
| CTTATCATCTAGCATGGACA+TGG | + | tig0022711:54070-54089 | None:intergenic | 40.0% | |
| CATGTCCATGCTAGATGATA+AGG | - | tig0022711:54068-54087 | Msa1401550:intron | 40.0% | |
| GATGATAAGGCTAAAGATGC+TGG | - | tig0022711:54081-54100 | Msa1401550:intron | 40.0% | |
| ACTAGGTCATACCTATTCCT+GGG | + | tig0022711:54137-54156 | None:intergenic | 40.0% | |
| TACTAGGTCATACCTATTCC+TGG | + | tig0022711:54138-54157 | None:intergenic | 40.0% | |
| CGGGATGAAAATAAGAAGAC+AGG | + | tig0022711:54462-54481 | None:intergenic | 40.0% | |
| ! | AAGTTTTCAGCCAATGTGTC+GGG | + | tig0022711:54481-54500 | None:intergenic | 40.0% |
| ! | GAAGTTTTCAGCCAATGTGT+CGG | + | tig0022711:54482-54501 | None:intergenic | 40.0% |
| TGATGATCCAGATCACATGA+TGG | - | tig0022711:54572-54591 | Msa1401550:intron | 40.0% | |
| TTCATTGCCATCATGTGATC+TGG | + | tig0022711:54582-54601 | None:intergenic | 40.0% | |
| AAGTCTTTCACTTCCTACTG+TGG | - | tig0022711:54639-54658 | Msa1401550:intron | 40.0% | |
| !! | AATGGATTGTTGGCATCTTC+AGG | + | tig0022711:54678-54697 | None:intergenic | 40.0% |
| CTATGCAAACAGTTCTCTGA+TGG | - | tig0022711:54732-54751 | Msa1401550:intron | 40.0% | |
| !! | ACTTTTGGTAGCTGAATAGC+CGG | - | tig0022711:54770-54789 | Msa1401550:intron | 40.0% |
| ! | GCCGGTACTTGTTACATTTA+TGG | - | tig0022711:54788-54807 | Msa1401550:intron | 40.0% |
| !!! | CCACAAGTGATGCTTTTTCA+AGG | + | tig0022711:54837-54856 | None:intergenic | 40.0% |
| !! | CCTTGAAAAAGCATCACTTG+TGG | - | tig0022711:54834-54853 | Msa1401550:intron | 40.0% |
| TGGTTGCCAATTATTTCAGC+TGG | - | tig0022711:54981-55000 | Msa1401550:intron | 40.0% | |
| TATTTCAGCTGGAATCCTGT+AGG | - | tig0022711:54992-55011 | Msa1401550:intron | 40.0% | |
| AGTTTCGCCGTGATATTTGT+AGG | + | tig0022711:55047-55066 | None:intergenic | 40.0% | |
| TGCTTACTGCTTTGCTTTCA+TGG | + | tig0022711:55113-55132 | None:intergenic | 40.0% | |
| AAAGCAAAAGCAGGAAAGTC+AGG | + | tig0022711:55392-55411 | None:intergenic | 40.0% | |
| !! | TGACTTTCCTGCTTTTGCTT+TGG | - | tig0022711:55391-55410 | Msa1401550:CDS | 40.0% |
| AGACATTCCAAAGCAAAAGC+AGG | + | tig0022711:55401-55420 | None:intergenic | 40.0% | |
| ! | AATCATGCCTTCATAACGGA+GGG | + | tig0022711:55498-55517 | None:intergenic | 40.0% |
| AAATCATGCCTTCATAACGG+AGG | + | tig0022711:55499-55518 | None:intergenic | 40.0% | |
| ! | TCATCCGACTCTAAAGAATG+AGG | - | tig0022711:55747-55766 | Msa1401550:intron | 40.0% |
| !! | CTCTCCTCATTCTTTAGAGT+CGG | + | tig0022711:55754-55773 | None:intergenic | 40.0% |
| ! | CTTCGCGAACAATTTTCAGA+AGG | + | tig0022711:55804-55823 | None:intergenic | 40.0% |
| GATAGGAGAGGAGGATATAT+CGG | - | tig0022711:55840-55859 | Msa1401550:CDS | 40.0% | |
| CTACATGAGAGAATACAGTC+CGG | + | tig0022711:55985-56004 | None:intergenic | 40.0% | |
| !! | AGGCAACATCAAAAGCACTA+TGG | + | tig0022711:56050-56069 | None:intergenic | 40.0% |
| ATCCTACTCCAACACAGAAA+AGG | - | tig0022711:56092-56111 | Msa1401550:intron | 40.0% | |
| ! | TACCTTTTCTGTGTTGGAGT+AGG | + | tig0022711:56097-56116 | None:intergenic | 40.0% |
| GGTATTCTATCTCCACTTCA+TGG | + | tig0022711:56433-56452 | None:intergenic | 40.0% | |
| ! | GAGCTACTTTGCTTGAATTC+GGG | - | tig0022711:56480-56499 | Msa1401550:intron | 40.0% |
| TGGAAAAACTACTACTGCCA+TGG | - | tig0022711:56514-56533 | Msa1401550:intron | 40.0% | |
| AGCTGGAATACCAACAGTAA+GGG | + | tig0022711:56540-56559 | None:intergenic | 40.0% | |
| !! | TTCAGACAAGAGGTGTCTTA+AGG | - | tig0022711:56684-56703 | Msa1401550:CDS | 40.0% |
| !! | GTGTATACTTCAGGTTGGAT+AGG | + | tig0022711:56710-56729 | None:intergenic | 40.0% |
| ! | CATCTTTCACTCAGTATCGA+AGG | + | tig0022711:57064-57083 | None:intergenic | 40.0% |
| CTATCGTTCTACATCAGCAA+TGG | - | tig0022711:57464-57483 | Msa1401550:five_prime_UTR | 40.0% | |
| AAGATCCTAGGACTCAAAAG+AGG | + | tig0022711:57549-57568 | None:intergenic | 40.0% | |
| !! | ATGTTTGGGAACGGTGTTGT+TGG | - | tig0022711:48320-48339 | Msa1401550:three_prime_UTR | 45.0% |
| !! | TGTTTGGGAACGGTGTTGTT+GGG | - | tig0022711:48321-48340 | Msa1401550:three_prime_UTR | 45.0% |
| CTTTCTGTGCCTTGTGAGTA+TGG | + | tig0022711:48862-48881 | None:intergenic | 45.0% | |
| ! | GGAAATTTTGCTGGTAGAGC+TGG | - | tig0022711:49077-49096 | Msa1401550:intron | 45.0% |
| AAGGCTGCAGTCATTTCTGT+TGG | - | tig0022711:49327-49346 | Msa1401550:intron | 45.0% | |
| ! | GCTTCTACCCCATACTTTTG+TGG | - | tig0022711:49849-49868 | Msa1401550:CDS | 45.0% |
| !!! | GTTGACTCGACCTTGAGTTT+TGG | - | tig0022711:50202-50221 | Msa1401550:intron | 45.0% |
| !! | CTACCAATAACGGATGTGTC+TGG | + | tig0022711:50370-50389 | None:intergenic | 45.0% |
| CAGACACATCCGTTATTGGT+AGG | - | tig0022711:50368-50387 | Msa1401550:CDS | 45.0% | |
| CCTCTCCAAACAAGTGGATA+TGG | + | tig0022711:50760-50779 | None:intergenic | 45.0% | |
| CCATATCCACTTGTTTGGAG+AGG | - | tig0022711:50757-50776 | Msa1401550:intron | 45.0% | |
| AAATGACCTGCTGCATGCAA+TGG | - | tig0022711:50837-50856 | Msa1401550:intron | 45.0% | |
| AGCAATGGATAGTGCTAAGG+AGG | + | tig0022711:50947-50966 | None:intergenic | 45.0% | |
| GCAAGCAATGGATAGTGCTA+AGG | + | tig0022711:50950-50969 | None:intergenic | 45.0% | |
| ! | TAGGAGTATGGAGCAAGCAA+TGG | + | tig0022711:50962-50981 | None:intergenic | 45.0% |
| ! | GGCTTTTCATGTCTTGTAGG+AGG | + | tig0022711:51209-51228 | None:intergenic | 45.0% |
| CAAGCTCTCCTTAAATGAGC+AGG | + | tig0022711:51792-51811 | None:intergenic | 45.0% | |
| AGGAGAGCTTGCATAGTCAA+TGG | - | tig0022711:51801-51820 | Msa1401550:intron | 45.0% | |
| AGAGCTTGCATAGTCAATGG+AGG | - | tig0022711:51804-51823 | Msa1401550:intron | 45.0% | |
| ! | CCTCTTAAAATGGGCTTGCA+GGG | - | tig0022711:52018-52037 | Msa1401550:intron | 45.0% |
| TAAAACAGCAGGATCGCCAA+TGG | + | tig0022711:52131-52150 | None:intergenic | 45.0% | |
| GATTGCTGAACATGTCTGAC+AGG | - | tig0022711:52170-52189 | Msa1401550:intron | 45.0% | |
| CCACATGACAGTTAACCAAG+TGG | + | tig0022711:52275-52294 | None:intergenic | 45.0% | |
| CCACTTGGTTAACTGTCATG+TGG | - | tig0022711:52272-52291 | Msa1401550:intron | 45.0% | |
| TATTCCTTCAGGTATGGGAG+CGG | + | tig0022711:52547-52566 | None:intergenic | 45.0% | |
| AATTGGCACCTCACTTAGAG+AGG | + | tig0022711:52687-52706 | None:intergenic | 45.0% | |
| GGCCAAGGCAAATTCAGAAT+GGG | - | tig0022711:52724-52743 | Msa1401550:CDS | 45.0% | |
| TCAGAATGGGATGGACCATT+TGG | - | tig0022711:52737-52756 | Msa1401550:CDS | 45.0% | |
| !! | ACAGGTTGGTGCAGATGATA+AGG | - | tig0022711:52883-52902 | Msa1401550:intron | 45.0% |
| TGCAGATGATAAGGCTGTTC+TGG | - | tig0022711:52892-52911 | Msa1401550:intron | 45.0% | |
| TCATGAAAACGGCATGGAGA+AGG | - | tig0022711:53015-53034 | Msa1401550:intron | 45.0% | |
| !!! | GGCTGCAGTTTTGATTCTTG+GGG | - | tig0022711:53057-53076 | Msa1401550:intron | 45.0% |
| GATGATAGCATTTGAGCAGC+TGG | + | tig0022711:53100-53119 | None:intergenic | 45.0% | |
| CATCATTTGGATCCAGCCAA+TGG | - | tig0022711:53116-53135 | Msa1401550:intron | 45.0% | |
| CGTAGCAAATGCTTGCATTG+AGG | - | tig0022711:53658-53677 | Msa1401550:CDS | 45.0% | |
| ! | AATTCTTGGTGAGATGGGCT+TGG | - | tig0022711:54110-54129 | Msa1401550:intron | 45.0% |
| TTGACGCATTTCCAACCAAC+AGG | - | tig0022711:54525-54544 | Msa1401550:intron | 45.0% | |
| TCTTTCACTTCCTACTGTGG+TGG | - | tig0022711:54642-54661 | Msa1401550:intron | 45.0% | |
| TTGTTGGCATCTTCAGGAGA+TGG | + | tig0022711:54672-54691 | None:intergenic | 45.0% | |
| CCTGCCACCTACAAATATCA+CGG | - | tig0022711:55037-55056 | Msa1401550:CDS | 45.0% | |
| TTCGCCGTGATATTTGTAGG+TGG | + | tig0022711:55044-55063 | None:intergenic | 45.0% | |
| ! | GAAGCATCAACTGTCTTTCG+TGG | - | tig0022711:55470-55489 | Msa1401550:intron | 45.0% |
| AGATCATGGCGACACTTTCT+AGG | - | tig0022711:55701-55720 | Msa1401550:intron | 45.0% | |
| !! | ATGGCGACACTTTCTAGGAT+TGG | - | tig0022711:55706-55725 | Msa1401550:intron | 45.0% |
| ATTGTTCGCGAAGATCCAGA+TGG | - | tig0022711:55811-55830 | Msa1401550:intron | 45.0% | |
| !! | GATCCAGATGGAGCATTGAT+AGG | - | tig0022711:55823-55842 | Msa1401550:intron | 45.0% |
| TCTCCTATCAATGCTCCATC+TGG | + | tig0022711:55829-55848 | None:intergenic | 45.0% | |
| !! | AGATGGAGCATTGATAGGAG+AGG | - | tig0022711:55828-55847 | Msa1401550:intron | 45.0% |
| GAGAGGAGGATATATCGGAA+AGG | - | tig0022711:55845-55864 | Msa1401550:CDS | 45.0% | |
| AAGCACTATGGCATGAAGCA+GGG | + | tig0022711:56038-56057 | None:intergenic | 45.0% | |
| ! | AAAGCACTATGGCATGAAGC+AGG | + | tig0022711:56039-56058 | None:intergenic | 45.0% |
| ! | GGTACTTTTGCACCATGAAG+TGG | - | tig0022711:56418-56437 | Msa1401550:CDS | 45.0% |
| AATACCAACAGTAAGGGCCA+TGG | + | tig0022711:56534-56553 | None:intergenic | 45.0% | |
| CAGCTGGAATACCAACAGTA+AGG | + | tig0022711:56541-56560 | None:intergenic | 45.0% | |
| CTGGAGTGTATACTTCAGGT+TGG | + | tig0022711:56715-56734 | None:intergenic | 45.0% | |
| CAACCTGAAGTATACACTCC+AGG | - | tig0022711:56713-56732 | Msa1401550:CDS | 45.0% | |
| TCACCTGGAGTGTATACTTC+AGG | + | tig0022711:56719-56738 | None:intergenic | 45.0% | |
| CCTAGGACTCAAAAGAGGTT+TGG | + | tig0022711:57544-57563 | None:intergenic | 45.0% | |
| !! | CCAAACCTCTTTTGAGTCCT+AGG | - | tig0022711:57541-57560 | Msa1401550:five_prime_UTR | 45.0% |
| ! | GCACAGTGTGATGGAGTCAA+AGG | + | tig0022711:48386-48405 | None:intergenic | 50.0% |
| TCACAAGACTTGTCACCCTG+TGG | - | tig0022711:48509-48528 | Msa1401550:intron | 50.0% | |
| ATGCCAAGGATGAGACCACA+GGG | + | tig0022711:48527-48546 | None:intergenic | 50.0% | |
| CCTTGGCATCAAACAACCAG+CGG | - | tig0022711:48538-48557 | Msa1401550:intron | 50.0% | |
| GGAGGAAAGAATTGTACCGC+TGG | + | tig0022711:48557-48576 | None:intergenic | 50.0% | |
| ACACGCACCTTATCCAGCAA+AGG | + | tig0022711:48893-48912 | None:intergenic | 50.0% | |
| TGCAACTCAGGGATTGCCAT+TGG | - | tig0022711:49359-49378 | Msa1401550:intron | 50.0% | |
| GCAACTCAGGGATTGCCATT+GGG | - | tig0022711:49360-49379 | Msa1401550:intron | 50.0% | |
| CAACTCAGGGATTGCCATTG+GGG | - | tig0022711:49361-49380 | Msa1401550:intron | 50.0% | |
| ACGAGAGGACAAATCCCCAA+TGG | + | tig0022711:49378-49397 | None:intergenic | 50.0% | |
| !! | GTCTTTACTGGCTCGGGAAA+TGG | - | tig0022711:49402-49421 | Msa1401550:intron | 50.0% |
| CAACGCATCAGTGTCATGTC+TGG | + | tig0022711:49478-49497 | None:intergenic | 50.0% | |
| ATCCGGTGTCTGACACATGT+CGG | + | tig0022711:49576-49595 | None:intergenic | 50.0% | |
| !! | TGTAGTTTGCTCTGGTGCTC+AGG | - | tig0022711:49816-49835 | Msa1401550:CDS | 50.0% |
| GCACCAGACACATCCGTTAT+TGG | - | tig0022711:50364-50383 | Msa1401550:CDS | 50.0% | |
| CATCATCCATTGCATGCAGC+AGG | + | tig0022711:50846-50865 | None:intergenic | 50.0% | |
| CTGCTGCATGCAATGGATGA+TGG | - | tig0022711:50844-50863 | Msa1401550:intron | 50.0% | |
| CGATGTGTGAGCATCTTGTC+AGG | + | tig0022711:51411-51430 | None:intergenic | 50.0% | |
| GGATTCCTACCACGAAGACA+TGG | - | tig0022711:51547-51566 | Msa1401550:intron | 50.0% | |
| TTCCTACCACGAAGACATGG+AGG | - | tig0022711:51550-51569 | Msa1401550:intron | 50.0% | |
| TCCTACCACGAAGACATGGA+GGG | - | tig0022711:51551-51570 | Msa1401550:intron | 50.0% | |
| ! | GCCTCTTAAAATGGGCTTGC+AGG | - | tig0022711:52017-52036 | Msa1401550:intron | 50.0% |
| ! | CCCTGCAAGCCCATTTTAAG+AGG | + | tig0022711:52021-52040 | None:intergenic | 50.0% |
| GTCTGACAGGTTTCTCTGAG+CGG | - | tig0022711:52183-52202 | Msa1401550:intron | 50.0% | |
| TTCAGGTATGGGAGCGGTAT+GGG | + | tig0022711:52541-52560 | None:intergenic | 50.0% | |
| TCTCCATGCCTCTCTAAGTG+AGG | - | tig0022711:52676-52695 | Msa1401550:CDS | 50.0% | |
| ! | GTGAGGTGCCAATTCAAGCA+TGG | - | tig0022711:52693-52712 | Msa1401550:CDS | 50.0% |
| AGCATGGTTATTGTGGGCCA+AGG | - | tig0022711:52709-52728 | Msa1401550:CDS | 50.0% | |
| GGGCCAAGGCAAATTCAGAA+TGG | - | tig0022711:52723-52742 | Msa1401550:CDS | 50.0% | |
| !!! | GCAGTTTTGATTCTTGGGGC+TGG | - | tig0022711:53061-53080 | Msa1401550:intron | 50.0% |
| ATACCTGCTCTGCATCCTTC+AGG | + | tig0022711:53210-53229 | None:intergenic | 50.0% | |
| GGCAATGAAGATGATCGACG+AGG | - | tig0022711:54593-54612 | Msa1401550:intron | 50.0% | |
| GACGAGGCACATATGCAGAA+GGG | - | tig0022711:54609-54628 | Msa1401550:intron | 50.0% | |
| AGATGGAAGTCCACCACAGT+AGG | + | tig0022711:54655-54674 | None:intergenic | 50.0% | |
| CCGTGATATTTGTAGGTGGC+AGG | + | tig0022711:55040-55059 | None:intergenic | 50.0% | |
| !! | TGGAGCATTGATAGGAGAGG+AGG | - | tig0022711:55831-55850 | Msa1401550:intron | 50.0% |
| TGATGTTGCCTGTTTCCGCA+TGG | - | tig0022711:56059-56078 | Msa1401550:intron | 50.0% | |
| AGGATAGTCTCTCCTCCATG+CGG | + | tig0022711:56077-56096 | None:intergenic | 50.0% | |
| TTCACGGATGTGAGCTCCTT+AGG | - | tig0022711:56150-56169 | Msa1401550:intron | 50.0% | |
| TGTTGGTATTCCAGCTGCTG+TGG | - | tig0022711:56544-56563 | Msa1401550:intron | 50.0% | |
| GTTGGTATTCCAGCTGCTGT+GGG | - | tig0022711:56545-56564 | Msa1401550:intron | 50.0% | |
| TCACCCTGTGGTCTCATCCT+TGG | - | tig0022711:48521-48540 | Msa1401550:intron | 55.0% | |
| GATGCCAAGGATGAGACCAC+AGG | + | tig0022711:48528-48547 | None:intergenic | 55.0% | |
| ! | CCGCTGGTTGTTTGATGCCA+AGG | + | tig0022711:48541-48560 | None:intergenic | 55.0% |
| !! | GCGTGGATTGGGACAACGTA+TGG | - | tig0022711:49115-49134 | Msa1401550:intron | 55.0% |
| TCCTTCCTTGGCTGCTGCTA+AGG | - | tig0022711:49308-49327 | Msa1401550:CDS | 55.0% | |
| CACCGACATGTGTCAGACAC+CGG | - | tig0022711:49571-49590 | Msa1401550:intron | 55.0% | |
| !! | ACCATATGTCGGTGTCACGC+CGG | - | tig0022711:51472-51491 | Msa1401550:intron | 55.0% |
| CCTACCACGAAGACATGGAG+GGG | - | tig0022711:51552-51571 | Msa1401550:intron | 55.0% | |
| CATTCCCCTCCATGTCTTCG+TGG | + | tig0022711:51559-51578 | None:intergenic | 55.0% | |
| CACGAAGACATGGAGGGGAA+TGG | - | tig0022711:51557-51576 | Msa1401550:intron | 55.0% | |
| GAGTCAGATTTGCGCATGCG+TGG | + | tig0022711:51858-51877 | None:intergenic | 55.0% | |
| CTTCAGGTATGGGAGCGGTA+TGG | + | tig0022711:52542-52561 | None:intergenic | 55.0% | |
| CATACCGCTCCCATACCTGA+AGG | - | tig0022711:52540-52559 | Msa1401550:CDS | 55.0% | |
| GCACCTCACTTAGAGAGGCA+TGG | + | tig0022711:52682-52701 | None:intergenic | 55.0% | |
| GTACCTGAAGGATGCAGAGC+AGG | - | tig0022711:53204-53223 | Msa1401550:intron | 55.0% | |
| ATGGGCTTGGACCCAGGAAT+AGG | - | tig0022711:54123-54142 | Msa1401550:CDS | 55.0% | |
| CGACGAGGCACATATGCAGA+AGG | - | tig0022711:54608-54627 | Msa1401550:intron | 55.0% | |
| CGTGGAACCCTCCGTTATGA+AGG | - | tig0022711:55488-55507 | Msa1401550:intron | 55.0% | |
| TGTTGCCTGTTTCCGCATGG+AGG | - | tig0022711:56062-56081 | Msa1401550:intron | 55.0% | |
| TCTCTCCTCCATGCGGAAAC+AGG | + | tig0022711:56070-56089 | None:intergenic | 55.0% | |
| ACTGCCATGGCCCTTACTGT+TGG | - | tig0022711:56527-56546 | Msa1401550:intron | 55.0% | |
| GCCTTAGCAGCAGCCAAGGA+AGG | + | tig0022711:49312-49331 | None:intergenic | 60.0% | |
| TGCAGCCTTAGCAGCAGCCA+AGG | + | tig0022711:49316-49335 | None:intergenic | 60.0% | |
| ACCGGCGTGACACCGACATA+TGG | + | tig0022711:51476-51495 | None:intergenic | 60.0% | |
| CCCCTCCATGTCTTCGTGGT+AGG | + | tig0022711:51555-51574 | None:intergenic | 60.0% | |
| TGCAGGAGGCTCCTTCCACT+TGG | - | tig0022711:52257-52276 | Msa1401550:intron | 60.0% | |
| AGGATTGCGTCCAGCTCGGA+TGG | + | tig0022711:55020-55039 | None:intergenic | 60.0% | |
| TGGCAGGATTGCGTCCAGCT+CGG | + | tig0022711:55024-55043 | None:intergenic | 60.0% | |
| GGTTGTGGTCTTTGCAGCGC+TGG | - | tig0022711:57293-57312 | Msa1401550:CDS | 60.0% | |
| ! | GGTGAGATGGGCTTGGACCC+AGG | - | tig0022711:54117-54136 | Msa1401550:CDS | 65.0% |
| CCAGCTCGGATGGCACCTAC+AGG | + | tig0022711:55010-55029 | None:intergenic | 65.0% | |
| ! | CCTGTAGGTGCCATCCGAGC+TGG | - | tig0022711:55007-55026 | Msa1401550:CDS | 65.0% |
| TCCAGCTGCTGTGGGAGCTC+TGG | - | tig0022711:56553-56572 | Msa1401550:intron | 65.0% | |
| ACCAGAGCTCCCACAGCAGC+TGG | + | tig0022711:56557-56576 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022711 | gene | 48135 | 57607 | 48135 | ID=Msa1401550;Name=Msa1401550 |
| tig0022711 | mRNA | 48135 | 57607 | 48135 | ID=Msa1401550-mRNA-1;Parent=Msa1401550;Name=Msa1401550-mRNA-1;_AED=0.11;_eAED=0.11;_QI=185|1|1|1|0.95|0.95|24|245|1046 |
| tig0022711 | exon | 48135 | 48432 | 48135 | ID=Msa1401550-mRNA-1:exon:18470;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 49008 | 49077 | 49008 | ID=Msa1401550-mRNA-1:exon:18469;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 49168 | 49329 | 49168 | ID=Msa1401550-mRNA-1:exon:18468;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 49629 | 49737 | 49629 | ID=Msa1401550-mRNA-1:exon:18467;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 49813 | 50050 | 49813 | ID=Msa1401550-mRNA-1:exon:18466;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 50233 | 50391 | 50233 | ID=Msa1401550-mRNA-1:exon:18465;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 50663 | 50742 | 50663 | ID=Msa1401550-mRNA-1:exon:18464;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 51030 | 51159 | 51030 | ID=Msa1401550-mRNA-1:exon:18463;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 51598 | 51715 | 51598 | ID=Msa1401550-mRNA-1:exon:18462;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 52063 | 52128 | 52063 | ID=Msa1401550-mRNA-1:exon:18461;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 52335 | 52415 | 52335 | ID=Msa1401550-mRNA-1:exon:18460;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 52517 | 52855 | 52517 | ID=Msa1401550-mRNA-1:exon:18459;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 53410 | 53550 | 53410 | ID=Msa1401550-mRNA-1:exon:18458;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 53646 | 53703 | 53646 | ID=Msa1401550-mRNA-1:exon:18457;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 53862 | 54028 | 53862 | ID=Msa1401550-mRNA-1:exon:18456;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 54114 | 54210 | 54114 | ID=Msa1401550-mRNA-1:exon:18455;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 54993 | 55164 | 54993 | ID=Msa1401550-mRNA-1:exon:18454;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 55357 | 55432 | 55357 | ID=Msa1401550-mRNA-1:exon:18453;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 55549 | 55659 | 55549 | ID=Msa1401550-mRNA-1:exon:18452;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 55839 | 55921 | 55839 | ID=Msa1401550-mRNA-1:exon:18451;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 56319 | 56492 | 56319 | ID=Msa1401550-mRNA-1:exon:18450;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 56611 | 56740 | 56611 | ID=Msa1401550-mRNA-1:exon:18449;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 56838 | 56924 | 56838 | ID=Msa1401550-mRNA-1:exon:18448;Parent=Msa1401550-mRNA-1 |
| tig0022711 | exon | 57183 | 57607 | 57183 | ID=Msa1401550-mRNA-1:exon:18447;Parent=Msa1401550-mRNA-1 |
| tig0022711 | five_prime_UTR | 57423 | 57607 | 57423 | ID=Msa1401550-mRNA-1:five_prime_utr;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 57183 | 57422 | 57183 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 56838 | 56924 | 56838 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 56611 | 56740 | 56611 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 56319 | 56492 | 56319 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 55839 | 55921 | 55839 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 55549 | 55659 | 55549 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 55357 | 55432 | 55357 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 54993 | 55164 | 54993 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 54114 | 54210 | 54114 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 53862 | 54028 | 53862 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 53646 | 53703 | 53646 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 53410 | 53550 | 53410 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 52517 | 52855 | 52517 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 52335 | 52415 | 52335 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 52063 | 52128 | 52063 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 51598 | 51715 | 51598 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 51030 | 51159 | 51030 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 50663 | 50742 | 50663 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 50233 | 50391 | 50233 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 49813 | 50050 | 49813 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 49629 | 49737 | 49629 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 49168 | 49329 | 49168 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 49008 | 49077 | 49008 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | CDS | 48380 | 48432 | 48380 | ID=Msa1401550-mRNA-1:cds;Parent=Msa1401550-mRNA-1 |
| tig0022711 | three_prime_UTR | 48135 | 48379 | 48135 | ID=Msa1401550-mRNA-1:three_prime_utr;Parent=Msa1401550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
