AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1116100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116100 MtrunA17_Chr4g0014311 61.837 283 87 2 236 497 2 284 6.77e-116 345
Msa1116100 MtrunA17_Chr8g0365271 88.298 188 17 1 315 497 5 192 4.69e-115 340
Msa1116100 MtrunA17_Chr5g0444831 87.778 180 17 1 323 497 1 180 1.85e-107 320
Msa1116100 MtrunA17_Chr3g0096071 57.360 197 81 1 119 315 30 223 1.11e-75 239
Msa1116100 MtrunA17_Chr1g0206481 53.020 149 70 0 122 270 144 292 5.32e-51 177
Msa1116100 MtrunA17_Chr1g0158831 43.357 143 81 0 121 263 6 148 4.56e-36 133
Msa1116100 MtrunA17_Chr7g0270411 53.435 131 56 2 374 499 1 131 2.81e-35 129
Msa1116100 MtrunA17_Chr2g0278111 43.357 143 81 0 121 263 143 285 2.53e-34 132
Msa1116100 MtrunA17_Chr5g0411141 43.357 143 81 0 121 263 144 286 2.99e-34 132
Msa1116100 MtrunA17_Chr3g0112231 42.568 148 76 2 173 320 9 147 2.49e-33 126
Msa1116100 MtrunA17_Chr3g0138341 65.517 87 25 1 315 401 20 101 3.98e-31 118
Msa1116100 MtrunA17_Chr2g0280031 46.465 99 53 0 121 219 133 231 2.81e-25 105
Msa1116100 MtrunA17_Chr5g0423441 44.000 100 56 0 121 220 143 242 3.40e-23 99.4
Msa1116100 MtrunA17_Chr1g0212881 42.857 98 52 1 323 420 1 94 1.23e-21 90.5
Msa1116100 MtrunA17_Chr2g0300061 56.452 62 27 0 354 415 7 68 2.00e-19 83.2
Msa1116100 MtrunA17_Chr1g0167871 23.600 250 184 4 137 379 357 606 3.07e-18 88.6
Msa1116100 MtrunA17_Chr2g0279021 24.188 277 202 7 138 410 2 274 2.90e-14 74.7
Msa1116100 MtrunA17_Chr4g0019691 28.000 150 105 3 268 416 22 169 8.25e-12 64.3
Msa1116100 MtrunA17_Chr1g0168201 30.909 110 74 1 320 427 23 132 8.53e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116100 AT2G05642.1 22.812 320 212 7 121 409 106 421 6.14e-20 94.0
Msa1116100 AT1G52950.1 25.993 277 187 8 132 394 153 425 1.01e-18 90.1

Find 145 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAGGACCTGCATATTTA+TGG 0.117816 7_3:+63647624 Msa1116100:intron
TCATTAGCATTTCATCATAT+TGG 0.193798 7_3:-63654486 None:intergenic
GTACACAATTGGCAAAATTA+TGG 0.241484 7_3:+63649986 Msa1116100:CDS
TCAAGCATCTGGAACCTTAA+TGG 0.259449 7_3:+63649232 Msa1116100:CDS
TGAGATCACTGATTGGAATT+TGG 0.259990 7_3:+63649964 Msa1116100:CDS
CACCAGATCATTCCCAGTTT+TGG 0.262486 7_3:-63650354 None:intergenic
ACCAACAGCCCCAGCTCTTT+GGG 0.263843 7_3:-63649917 None:intergenic
CATTAGCATTTCATCATATT+GGG 0.278253 7_3:-63654485 None:intergenic
AACCAACAGCCCCAGCTCTT+TGG 0.280088 7_3:-63649918 None:intergenic
GATCAGCTTGGTGCCATAAA+AGG 0.289808 7_3:-63649039 None:intergenic
AACTCCACTGGAGTTGAAAA+AGG 0.292499 7_3:-63647023 None:intergenic
GAGTTTCTTCTTCGTTGTTC+TGG 0.296756 7_3:+63654580 Msa1116100:CDS
TTTGGTGATTCAACCAAAAC+TGG 0.300487 7_3:+63650341 Msa1116100:CDS
TCCCATTTCAATTTCATTGC+TGG 0.307181 7_3:+63646925 Msa1116100:five_prime_UTR
TTCCGACGTTACAGTCAAAA+AGG 0.308743 7_3:-63649735 None:intergenic
ATCACCACGACAGGAGAGTT+TGG 0.314257 7_3:-63648963 None:intergenic
CATCATCAGGTTTATTTCAA+TGG 0.315786 7_3:+63648086 Msa1116100:CDS
TATAATTGTTGAAGTTGTTT+TGG 0.323134 7_3:+63654534 Msa1116100:CDS
AGAGGTGGTTCTTCTCTTAC+TGG 0.323267 7_3:-63654616 None:intergenic
TATTGAGAAACATAACATTA+AGG 0.333229 7_3:+63650051 Msa1116100:CDS
GCTATATGTTCAGATGTAAT+TGG 0.333374 7_3:+63648668 Msa1116100:intron
GAGAGAGAAAGAGGAAGATA+TGG 0.341986 7_3:-63646897 None:intergenic
CAAACACCTGGTAGCAAATC+TGG 0.343843 7_3:+63650386 Msa1116100:CDS
GTCAGATAAAGTAACCATTA+AGG 0.364427 7_3:-63649246 None:intergenic
AAACTCAACTTTGCCATTGA+AGG 0.369126 7_3:-63654563 None:intergenic
ATTGGAATTTGGTACACAAT+TGG 0.374723 7_3:+63649975 Msa1116100:CDS
TGGGAAGGGCGTGGTTGAGC+CGG 0.375331 7_3:-63647682 None:intergenic
TCTTCTTCGTTGTTCTGGTT+TGG 0.378776 7_3:+63654585 Msa1116100:CDS
ATCCAGCAATGAAATTGAAA+TGG 0.379576 7_3:-63646927 None:intergenic
GGGGTAACCAAGAGAATTGC+TGG 0.380597 7_3:-63649897 None:intergenic
ATGCCGCTGGTGTCACCTTC+AGG 0.389017 7_3:+63647735 Msa1116100:CDS
ATCGCCAAGCTCGACGTAAT+CGG 0.390041 7_3:-63654672 None:intergenic
TGGTGGTTCAGATCTGGTTA+TGG 0.390511 7_3:-63646959 None:intergenic
TTCCCTCCAGATTTGCTACC+AGG 0.400947 7_3:-63650392 None:intergenic
GCCAGAATCAAAATTATTGC+TGG 0.405520 7_3:+63649501 Msa1116100:CDS
CTTGGTTACCCCAAAGAGCT+GGG 0.411451 7_3:+63649908 Msa1116100:CDS
GGGAAGGGCGTGGTTGAGCC+GGG 0.422168 7_3:-63647681 None:intergenic
CTTTGCCACTAAACCTTCAC+AGG 0.424319 7_3:-63648275 None:intergenic
CTTGGAAAATACATGCTTGA+AGG 0.426484 7_3:-63646837 None:intergenic
ACATATTGGTGAAACGCAAT+TGG 0.436178 7_3:+63650204 Msa1116100:CDS
TGATCTTTCTCCAATCTCTT+CGG 0.436787 7_3:-63650453 None:intergenic
TCTTGGTTACCCCAAAGAGC+TGG 0.441511 7_3:+63649907 Msa1116100:CDS
ATTATTTGCTAGAAGGAAGA+AGG 0.444141 7_3:+63654097 Msa1116100:intron
TCAAGACATAATTGATGCTC+AGG 0.445664 7_3:+63649777 Msa1116100:CDS
GAGAGAGGTCGGTGAACATA+AGG 0.445732 7_3:-63646864 None:intergenic
GAGGATCCACTGTTCTTTGT+GGG 0.451170 7_3:+63648896 Msa1116100:CDS
GATTTGAGTAGTTCATCATC+AGG 0.452107 7_3:+63648073 Msa1116100:CDS
CCCCAAAGAGCTGGGGCTGT+TGG 0.454055 7_3:+63649916 Msa1116100:CDS
AATGTTCCGCTAACACATAT+TGG 0.459555 7_3:+63650190 Msa1116100:CDS
GGGAGTGTAGAGAGAGAAAG+AGG 0.461524 7_3:-63646906 None:intergenic
ATACTTGGCACCGAAGAGAT+TGG 0.467029 7_3:+63650443 Msa1116100:CDS
AGGTGATGGTGGGAAGGGCG+TGG 0.470830 7_3:-63647691 None:intergenic
CGGTGAACATAAGGTTGCCT+TGG 0.471587 7_3:-63646855 None:intergenic
TCACCACGACAGGAGAGTTT+GGG 0.473991 7_3:-63648962 None:intergenic
GACCTGCATATTTATGGCTC+TGG 0.474500 7_3:+63647630 Msa1116100:CDS
CAAGGTCTTAGTCAAGCATC+TGG 0.477469 7_3:+63649221 Msa1116100:CDS
GAAGAACCACCTCTCATTTG+CGG 0.479919 7_3:+63654625 Msa1116100:CDS
TTTGATTCTGGCCGCACACT+TGG 0.483075 7_3:-63649490 None:intergenic
GTATTGAGCCGGAGTACAAT+TGG 0.487857 7_3:+63649451 Msa1116100:CDS
TTCTATTTGTGGTATTGAGC+CGG 0.489593 7_3:+63649440 Msa1116100:CDS
CACCAGAGCCATAAATATGC+AGG 0.489635 7_3:-63647632 None:intergenic
TCCAGCAATGAAATTGAAAT+GGG 0.492336 7_3:-63646926 None:intergenic
AGAGGATCCACTGTTCTTTG+TGG 0.495714 7_3:+63648895 Msa1116100:CDS
TGCTAGAAGGAAGAAGGATC+TGG 0.499438 7_3:+63654103 Msa1116100:intron
TTAAAGTTGAGATCACTGAT+TGG 0.499548 7_3:+63649957 Msa1116100:CDS
CAGATTCAAGTTGCATGTCC+AGG 0.501401 7_3:+63649681 Msa1116100:intron
ACGACTGTTACAGGGGTAAG+AGG 0.503000 7_3:+63648877 Msa1116100:intron
TTATCCGATTACGTCGAGCT+TGG 0.503192 7_3:+63654668 Msa1116100:CDS
AACCAAAACTGGGAATGATC+TGG 0.505410 7_3:+63650352 Msa1116100:CDS
CTATTAGAATGGATGCTCAC+TGG 0.506703 7_3:+63648928 Msa1116100:CDS
CTGTAACGTCGGAAATTATG+TGG 0.507211 7_3:+63649744 Msa1116100:CDS
ATGATGCTGATCTGATCAAA+AGG 0.508055 7_3:+63650026 Msa1116100:CDS
GTAGCAAATCTGGAGGGAAA+AGG 0.510327 7_3:+63650396 Msa1116100:CDS
GTAAATTGAGAGAGAGAGGT+CGG 0.512702 7_3:-63646875 None:intergenic
TATGGTAAATTGAGAGAGAG+AGG 0.513331 7_3:-63646879 None:intergenic
CATAATTGATGCTCAGGGGC+AGG 0.513903 7_3:+63649783 Msa1116100:CDS
CACGACTCGTTGCCATGGAT+CGG 0.515182 7_3:-63647057 None:intergenic
TTTCAATTTCATTGCTGGAT+CGG 0.516672 7_3:+63646930 Msa1116100:five_prime_UTR
CTACGATACTCCTTAGCATC+CGG 0.519483 7_3:-63649077 None:intergenic
AACTCCAGTGGAGTTGAACT+CGG 0.520821 7_3:+63647031 Msa1116100:five_prime_UTR
CATCAGGTTTATTTCAATGG+TGG 0.521054 7_3:+63648089 Msa1116100:CDS
GCAGAGGATTCTGCTATACT+TGG 0.527026 7_3:+63650428 Msa1116100:CDS
GATTGGTGGTGCTGCAATTG+AGG 0.527153 7_3:+63649193 Msa1116100:CDS
GTTTCACCAATATGTGTTAG+CGG 0.529317 7_3:-63650196 None:intergenic
CTACAGGCCAGCAATTCTCT+TGG 0.532160 7_3:+63649890 Msa1116100:intron
AGAGCAGGAATGCTGTTCCT+AGG 0.536985 7_3:+63649550 Msa1116100:CDS
CGTAGAGGTGATGGTGGGAA+GGG 0.538991 7_3:-63647696 None:intergenic
GGTGGTTCTTCTCTTACTGG+TGG 0.540396 7_3:-63654613 None:intergenic
GCCGCCGAGTTCAACTCCAC+TGG 0.541748 7_3:-63647035 None:intergenic
TGAACTCGGCGGCCGATCCA+TGG 0.542991 7_3:+63647045 Msa1116100:exon
GTGCTAGATGCAATCAGAGC+AGG 0.545742 7_3:+63649535 Msa1116100:CDS
AAATGTAAAATCACCACGAC+AGG 0.555493 7_3:-63648972 None:intergenic
ACGTAGAGGTGATGGTGGGA+AGG 0.556538 7_3:-63647697 None:intergenic
TCCATGGCAACGAGTCGTGA+TGG 0.556662 7_3:+63647061 Msa1116100:exon
ACCATCACGACTCGTTGCCA+TGG 0.556891 7_3:-63647062 None:intergenic
GTCCAGGTGATGGACAATAC+AGG 0.558482 7_3:+63649697 Msa1116100:CDS
TTGGAAAATACATGCTTGAA+GGG 0.559428 7_3:-63646836 None:intergenic
GCTGCAATTGAGGTGGCTCA+AGG 0.559918 7_3:+63649203 Msa1116100:CDS
ATCCTGTATTGTCCATCACC+TGG 0.560069 7_3:-63649699 None:intergenic
AAAGAGCTGGGGCTGTTGGT+TGG 0.562004 7_3:+63649920 Msa1116100:CDS
GGATCAATATGCTATTAGAA+TGG 0.562263 7_3:+63648917 Msa1116100:CDS
CAAGCTCATTGACATAACAT+TGG 0.563976 7_3:+63648744 Msa1116100:CDS
TGTTCTCAGCAACTTCCACC+CGG 0.571267 7_3:+63647663 Msa1116100:CDS
GGCAAAATTATGGTGTCAAG+AGG 0.573158 7_3:+63649996 Msa1116100:CDS
TATTGGTGAAACGCAATTGG+AGG 0.573239 7_3:+63650207 Msa1116100:CDS
ATTGTCATTAACAGGATTGG+TGG 0.577079 7_3:+63649179 Msa1116100:intron
CAAGTTGCATGTCCAGGTGA+TGG 0.577260 7_3:+63649687 Msa1116100:CDS
GCTCATTGACATAACATTGG+AGG 0.580482 7_3:+63648747 Msa1116100:CDS
GTTATCGTCGCGACTCGTTG+AGG 0.585583 7_3:-63647098 None:intergenic
CAGATGTAATTGGTATGTTG+TGG 0.586768 7_3:+63648678 Msa1116100:intron
ATTATCATCTAAGATCAGCT+TGG 0.587306 7_3:-63649051 None:intergenic
CAAAACTGGGAATGATCTGG+TGG 0.595620 7_3:+63650355 Msa1116100:CDS
GAATCAAAATTATTGCTGGA+AGG 0.597398 7_3:+63649505 Msa1116100:CDS
GAAAAGGTCTGCTGATGCAG+AGG 0.597431 7_3:+63650412 Msa1116100:CDS
CAAAATTGAATGTATGCCGC+TGG 0.599212 7_3:+63647722 Msa1116100:CDS
AAGGGCGTGGTTGAGCCGGG+TGG 0.600579 7_3:-63647678 None:intergenic
TCGGATAAAACGATAAGTGA+AGG 0.602781 7_3:-63654653 None:intergenic
AAGGAGACGCCGCAAATGAG+AGG 0.604120 7_3:-63654634 None:intergenic
GTGGATAACGAGCAAACACC+TGG 0.605293 7_3:+63650374 Msa1116100:CDS
CCAACAGCCCCAGCTCTTTG+GGG 0.608875 7_3:-63649916 None:intergenic
TTGACACATATCATCTTCTG+CGG 0.610725 7_3:-63650485 None:intergenic
TTGGTGATTCAACCAAAACT+GGG 0.614113 7_3:+63650342 Msa1116100:CDS
ACGTCGGAAATTATGTGGGA+AGG 0.615504 7_3:+63649749 Msa1116100:CDS
TGAGAAACATAACATTAAGG+TGG 0.615815 7_3:+63650054 Msa1116100:CDS
TTGCAACGTAGAGGTGATGG+TGG 0.620543 7_3:-63647702 None:intergenic
TTGGTTACCCCAAAGAGCTG+GGG 0.621279 7_3:+63649909 Msa1116100:CDS
TGCAACGTAGAGGTGATGGT+GGG 0.625208 7_3:-63647701 None:intergenic
TCATAATACCAATTGTACTC+CGG 0.625759 7_3:-63649459 None:intergenic
GAAGGAAGAAGGATCTGGAA+AGG 0.626368 7_3:+63654108 Msa1116100:intron
TGGTGGTGCTGCAATTGAGG+TGG 0.629647 7_3:+63649196 Msa1116100:CDS
AGAATTGATTGAGTCGTCTG+AGG 0.634133 7_3:+63649301 Msa1116100:CDS
CAAGACATAATTGATGCTCA+GGG 0.636195 7_3:+63649778 Msa1116100:CDS
GCAGAAGATGATATGTGTCA+AGG 0.642119 7_3:+63650487 Msa1116100:CDS
ACACCTGGTAGCAAATCTGG+AGG 0.653753 7_3:+63650389 Msa1116100:CDS
TGTAACGTCGGAAATTATGT+GGG 0.659859 7_3:+63649745 Msa1116100:CDS
AGTCGTGATGGTAACAGCGA+GGG 0.659991 7_3:+63647073 Msa1116100:CDS
TCGCGACGATAACAACGAGA+AGG 0.667643 7_3:+63647108 Msa1116100:CDS
CAACCTGAAGGTGACACCAG+CGG 0.669042 7_3:-63647738 None:intergenic
ATTGATCCCACAAAGAACAG+TGG 0.670558 7_3:-63648902 None:intergenic
CACCTGGTAGCAAATCTGGA+GGG 0.674588 7_3:+63650390 Msa1116100:CDS
GAGACGCCGCAAATGAGAGG+TGG 0.676854 7_3:-63654631 None:intergenic
GAGTCGTGATGGTAACAGCG+AGG 0.724601 7_3:+63647072 Msa1116100:CDS
TGATGCATGTACCAAGTGTG+CGG 0.729636 7_3:+63649479 Msa1116100:CDS
TCCAGTGGAGTTGAACTCGG+CGG 0.731822 7_3:+63647034 Msa1116100:five_prime_UTR
AAGACATAATTGATGCTCAG+GGG 0.732941 7_3:+63649779 Msa1116100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTTATAAATTTA+TGG - chr7_3:63653623-63653642 None:intergenic 0.0%
!! TTTGTTTATTAGATAAAATA+TGG + chr7_3:63647553-63647572 Msa1116100:intron 10.0%
!!! TTTATTTTATGTTCTAATTA+GGG - chr7_3:63649347-63649366 None:intergenic 10.0%
!!! ATTTATTTTATGTTCTAATT+AGG - chr7_3:63649348-63649367 None:intergenic 10.0%
!!! AAAACAGAAATTTAAAATTA+CGG - chr7_3:63650545-63650564 None:intergenic 10.0%
!!! AATATTAAATTAGTTTATCT+AGG + chr7_3:63651095-63651114 Msa1116100:intron 10.0%
!!! AATCTAATTTATTTCTTTTA+AGG - chr7_3:63652225-63652244 None:intergenic 10.0%
!!! AAATTGAATTTTATTACAAT+AGG + chr7_3:63652927-63652946 Msa1116100:intron 10.0%
!!! AATTGAATTTTATTACAATA+GGG + chr7_3:63652928-63652947 Msa1116100:intron 10.0%
!! TAAAAAAAATCAAAAAATTG+AGG + chr7_3:63653434-63653453 Msa1116100:intron 10.0%
!! AAAAAAAATCAAAAAATTGA+GGG + chr7_3:63653435-63653454 Msa1116100:intron 10.0%
!! GTTAATATTTAATTCGAATT+GGG + chr7_3:63647211-63647230 Msa1116100:intron 15.0%
!!! TATCAAATTTTATTGCTTTA+TGG + chr7_3:63647900-63647919 Msa1116100:intron 15.0%
!!! GATTTTTATTTCACAAATAA+AGG + chr7_3:63648171-63648190 Msa1116100:intron 15.0%
!!! AATTGCACATATATTAATTT+TGG - chr7_3:63648610-63648629 None:intergenic 15.0%
!! ACAATTATTAAGTTCTATAA+AGG - chr7_3:63649156-63649175 None:intergenic 15.0%
!!! TTTTTAAATATTTTGAACCA+TGG + chr7_3:63650262-63650281 Msa1116100:intron 15.0%
!!! TTTTAAATATTTTGAACCAT+GGG + chr7_3:63650263-63650282 Msa1116100:intron 15.0%
!! AAATAGTAAAAGATGAAATT+CGG - chr7_3:63650913-63650932 None:intergenic 15.0%
!!! CAAATATTCATTTTGATAAA+TGG + chr7_3:63651055-63651074 Msa1116100:intron 15.0%
!!! TTAATATTTTTCAAAATGCA+AGG - chr7_3:63651083-63651102 None:intergenic 15.0%
!! TATGTAGAATGATATAATTT+AGG - chr7_3:63651246-63651265 None:intergenic 15.0%
!! TACTTAATATTATCATATAG+TGG + chr7_3:63651290-63651309 Msa1116100:intron 15.0%
!!! TATCACTAAGTTTTTTTTTA+GGG - chr7_3:63652158-63652177 None:intergenic 15.0%
!!! TTATCACTAAGTTTTTTTTT+AGG - chr7_3:63652159-63652178 None:intergenic 15.0%
!!! ATGATATTTTTAGATTTTCA+CGG - chr7_3:63652853-63652872 None:intergenic 15.0%
!!! TGATTTTTGAATTTTAAAAC+CGG + chr7_3:63652874-63652893 Msa1116100:intron 15.0%
!! AAAAGATAACAATAATACAT+AGG - chr7_3:63653358-63653377 None:intergenic 15.0%
!! AAAAAAATCAAAAAATTGAG+GGG + chr7_3:63653436-63653455 Msa1116100:intron 15.0%
!! TTATTTGATTATTACATGTT+TGG - chr7_3:63653655-63653674 None:intergenic 15.0%
!!! ATCATTACATTAACTTTTTG+TGG - chr7_3:63646982-63647001 None:intergenic 20.0%
!! ATAAAGCAAATAAGAAATTG+AGG - chr7_3:63647151-63647170 None:intergenic 20.0%
!! TTCGAATTAAATATTAACGA+TGG - chr7_3:63647209-63647228 None:intergenic 20.0%
!! CGTTAATATTTAATTCGAAT+TGG + chr7_3:63647210-63647229 Msa1116100:intron 20.0%
!!! AATCTGAGAATCAATTTTAT+GGG - chr7_3:63647389-63647408 None:intergenic 20.0%
!!! AAATCTGAGAATCAATTTTA+TGG - chr7_3:63647390-63647409 None:intergenic 20.0%
!! GTTTATTAGATAAAATATGG+AGG + chr7_3:63647556-63647575 Msa1116100:intron 20.0%
!!! ACTCAAATCAATGATTTTTT+TGG - chr7_3:63648062-63648081 None:intergenic 20.0%
!!! TTTTGTTTGTTTGTCAATTT+AGG + chr7_3:63648206-63648225 Msa1116100:intron 20.0%
!! AGCAATTAAAATGTAAAGAT+TGG + chr7_3:63648305-63648324 Msa1116100:intron 20.0%
!! AAAGCAAATATCAAATATAG+AGG - chr7_3:63648850-63648869 None:intergenic 20.0%
!! TATTTGATATTTGCTTTATG+TGG + chr7_3:63648853-63648872 Msa1116100:intron 20.0%
!! TATTGAGAAACATAACATTA+AGG + chr7_3:63650051-63650070 Msa1116100:CDS 20.0%
!!! TTAAGGTGGTAATTTTTTAT+AGG + chr7_3:63650068-63650087 Msa1116100:intron 20.0%
!! AAAAAACATTACACCAAAAT+GGG - chr7_3:63650633-63650652 None:intergenic 20.0%
!! CTTTCCTTCAAAAAAAAAAT+AGG - chr7_3:63650740-63650759 None:intergenic 20.0%
!!! ATGATATTTGAGATGAATTT+TGG + chr7_3:63650937-63650956 Msa1116100:intron 20.0%
!!! TTTTAGCAAATTGTTATGTT+TGG + chr7_3:63650975-63650994 Msa1116100:intron 20.0%
!! AAATGAATATTTGTGATCAT+TGG - chr7_3:63651048-63651067 None:intergenic 20.0%
!! CTCTTAAAAATTTCAGTTAA+TGG - chr7_3:63651122-63651141 None:intergenic 20.0%
!! TACATAAGTATAAAACTGTT+AGG + chr7_3:63651260-63651279 Msa1116100:intron 20.0%
!! ACATAAGTATAAAACTGTTA+GGG + chr7_3:63651261-63651280 Msa1116100:intron 20.0%
!! AATATTATCATATAGTGGTT+AGG + chr7_3:63651295-63651314 Msa1116100:intron 20.0%
!!! ATCACTAAGTTTTTTTTTAG+GGG - chr7_3:63652157-63652176 None:intergenic 20.0%
!!! ACAACAATTTTCAACATTAT+TGG + chr7_3:63652533-63652552 Msa1116100:intron 20.0%
!!! AATTACACATTTAACTTCAA+CGG - chr7_3:63652772-63652791 None:intergenic 20.0%
!!! TGATATTTTTAGATTTTCAC+GGG - chr7_3:63652852-63652871 None:intergenic 20.0%
!!! TAATTTTTTCGCTTTCTAAA+TGG + chr7_3:63653165-63653184 Msa1116100:intron 20.0%
!! ATAACAATAATACATAGGAA+AGG - chr7_3:63653353-63653372 None:intergenic 20.0%
!!! TATTTTGAGGAAAAAAAATG+AGG + chr7_3:63653459-63653478 Msa1116100:intron 20.0%
!!! ATTTTGAGGAAAAAAAATGA+GGG + chr7_3:63653460-63653479 Msa1116100:intron 20.0%
!! CATGTAATAATCAAATAACT+TGG + chr7_3:63653657-63653676 Msa1116100:intron 20.0%
!!! GTTTTTTATTATTTGCTAGA+AGG + chr7_3:63654090-63654109 Msa1116100:intron 20.0%
!!! ATTTTCTTTACAGTGAATTA+AGG + chr7_3:63654394-63654413 Msa1116100:intron 20.0%
!!! TTTTCTTTACAGTGAATTAA+GGG + chr7_3:63654395-63654414 Msa1116100:intron 20.0%
!!! TATAATTGTTGAAGTTGTTT+TGG + chr7_3:63654534-63654553 Msa1116100:CDS 20.0%
!! ATTACATTAACTTTTTGTGG+TGG - chr7_3:63646979-63646998 None:intergenic 25.0%
!!! CAAAACATTGTTTTTTTGAG+AGG + chr7_3:63647502-63647521 Msa1116100:intron 25.0%
! AGGAAATTTCAAAACATTGT+TGG + chr7_3:63647522-63647541 Msa1116100:intron 25.0%
! AAATTTCAAAACATTGTTGG+AGG + chr7_3:63647525-63647544 Msa1116100:intron 25.0%
!! GTTTTCATTAAGGTAAGAAT+TGG - chr7_3:63647990-63648009 None:intergenic 25.0%
! TCACAAATAAAGGTAATTGT+TGG + chr7_3:63648181-63648200 Msa1116100:intron 25.0%
! CACAAATAAAGGTAATTGTT+GGG + chr7_3:63648182-63648201 Msa1116100:intron 25.0%
! ACAAATAAAGGTAATTGTTG+GGG + chr7_3:63648183-63648202 Msa1116100:intron 25.0%
!! AATTTAGGAATTTTCGTACT+GGG + chr7_3:63648221-63648240 Msa1116100:intron 25.0%
! TCAAAAACTTCAAGTAGAAA+AGG - chr7_3:63648519-63648538 None:intergenic 25.0%
!! TACCATTATAAATGATAACG+TGG + chr7_3:63648540-63648559 Msa1116100:intron 25.0%
! TTCCACGTTATCATTTATAA+TGG - chr7_3:63648545-63648564 None:intergenic 25.0%
!! ATTATAAATGATAACGTGGA+AGG + chr7_3:63648544-63648563 Msa1116100:intron 25.0%
!! ATTCACCTCTTTTTCTTTTA+AGG - chr7_3:63648713-63648732 None:intergenic 25.0%
! TTAAAAGAAAAAGAGGTGAA+TGG + chr7_3:63648712-63648731 Msa1116100:CDS 25.0%
!! TTGTTGTATGTATTCCTTTT+AGG + chr7_3:63648823-63648842 Msa1116100:intron 25.0%
! GGAAAACTCAAAAAATACTA+TGG + chr7_3:63648996-63649015 Msa1116100:CDS 25.0%
!!! AAAAAATACTATGGTGCTAT+GGG + chr7_3:63649005-63649024 Msa1116100:CDS 25.0%
!! GATCTTAGATGATAATTTTC+CGG + chr7_3:63649058-63649077 Msa1116100:CDS 25.0%
! GCAAGTAATAATAACATATC+TGG + chr7_3:63649099-63649118 Msa1116100:intron 25.0%
! TGTTGATATAAGCTATAAAC+TGG - chr7_3:63649133-63649152 None:intergenic 25.0%
! AATAAATCACACTAGAGAAT+AGG + chr7_3:63649361-63649380 Msa1116100:intron 25.0%
!! ATAGTTTTTGCTTCTATTTG+TGG + chr7_3:63649429-63649448 Msa1116100:CDS 25.0%
! CCAAGCAATCAAAATATATA+CGG - chr7_3:63649617-63649636 None:intergenic 25.0%
!!! CGTATATATTTTGATTGCTT+GGG + chr7_3:63649615-63649634 Msa1116100:intron 25.0%
!! TATTAGTTTAATGTTTCCCA+TGG - chr7_3:63650282-63650301 None:intergenic 25.0%
! CAAAAAACATTACACCAAAA+TGG - chr7_3:63650634-63650653 None:intergenic 25.0%
!!! TGTAATGTTTTTTGAACCTT+AGG + chr7_3:63650640-63650659 Msa1116100:intron 25.0%
! ATAAACGGGAAACAAATAAA+AGG - chr7_3:63650674-63650693 None:intergenic 25.0%
!!! TCCTCCTATTTTTTTTTTGA+AGG + chr7_3:63650733-63650752 Msa1116100:intron 25.0%
! TCCTTCAAAAAAAAAATAGG+AGG - chr7_3:63650737-63650756 None:intergenic 25.0%
! CATTACATATGTAAAACACT+TGG - chr7_3:63650813-63650832 None:intergenic 25.0%
! TATCATGTGTTTAAGCTAAT+AGG - chr7_3:63650861-63650880 None:intergenic 25.0%
! ACAGTATCATAACTTATAGT+TGG + chr7_3:63651335-63651354 Msa1116100:intron 25.0%
! CAGTATCATAACTTATAGTT+GGG + chr7_3:63651336-63651355 Msa1116100:intron 25.0%
! AGTATCATAACTTATAGTTG+GGG + chr7_3:63651337-63651356 Msa1116100:intron 25.0%
!!! TGTCTTTTTTGTTTTTTTGG+TGG - chr7_3:63651957-63651976 None:intergenic 25.0%
!!! CAGTGTCTTTTTTGTTTTTT+TGG - chr7_3:63651960-63651979 None:intergenic 25.0%
!!! ATGCAAGAACACATTTTTTA+AGG + chr7_3:63652080-63652099 Msa1116100:intron 25.0%
!!! TGCAAGAACACATTTTTTAA+GGG + chr7_3:63652081-63652100 Msa1116100:intron 25.0%
!! TTTTCGTGTAATTAAGCTTT+TGG + chr7_3:63652123-63652142 Msa1116100:intron 25.0%
! TTGCACTAAAAAAAATCGAT+CGG - chr7_3:63652260-63652279 None:intergenic 25.0%
! CTATGATATCATTAATGAAG+AGG + chr7_3:63652280-63652299 Msa1116100:intron 25.0%
!!! TTCCAAGAATTTTTTGACAT+GGG - chr7_3:63652377-63652396 None:intergenic 25.0%
!!! TTTCCAAGAATTTTTTGACA+TGG - chr7_3:63652378-63652397 None:intergenic 25.0%
!!! AGGTTATTTTGGTATTTTTG+TGG - chr7_3:63652403-63652422 None:intergenic 25.0%
! AAATACCAAAATAACCTCAT+CGG + chr7_3:63652406-63652425 Msa1116100:intron 25.0%
!!! AACAGCAATTTTTCAAGAAA+AGG - chr7_3:63652637-63652656 None:intergenic 25.0%
!! AATCTTTGCTGTAAAATGTA+TGG - chr7_3:63652796-63652815 None:intergenic 25.0%
!! ATACATTTTACAGCAAAGAT+TGG + chr7_3:63652795-63652814 Msa1116100:intron 25.0%
!!! TACGTCTTTAAAACAATAGT+TGG + chr7_3:63653569-63653588 Msa1116100:intron 25.0%
!!! TTGGTGTTTACACTAATTTT+TGG + chr7_3:63653676-63653695 Msa1116100:intron 25.0%
! CAAACAATATTATCCAAAAC+AGG + chr7_3:63653704-63653723 Msa1116100:intron 25.0%
! AATATTATCCAAAACAGGTA+AGG + chr7_3:63653709-63653728 Msa1116100:intron 25.0%
!! GTTCTTTAGGTTTAGATTTA+TGG + chr7_3:63653746-63653765 Msa1116100:intron 25.0%
!!! ACTTGTTTTATTAAAGTTGC+TGG - chr7_3:63653835-63653854 None:intergenic 25.0%
! AGAAGAAGAAAGAAAATGAA+AGG + chr7_3:63653902-63653921 Msa1116100:intron 25.0%
!!! AAACTCATTAACTTGTTTAC+TGG + chr7_3:63654035-63654054 Msa1116100:intron 25.0%
! CAACATTAGAAGTAAAGATT+TGG + chr7_3:63654186-63654205 Msa1116100:intron 25.0%
! TTGATGTTTAGTTGATTAAG+TGG - chr7_3:63654254-63654273 None:intergenic 25.0%
! ATGAAATTTGGGAAAAGATT+TGG - chr7_3:63654284-63654303 None:intergenic 25.0%
!! TCTTTTCCCAAATTTCATAA+AGG + chr7_3:63654286-63654305 Msa1116100:intron 25.0%
!! CTTTTCCCAAATTTCATAAA+GGG + chr7_3:63654287-63654306 Msa1116100:intron 25.0%
!! AATTTTCTCAAGCCAATAAT+TGG + chr7_3:63654346-63654365 Msa1116100:intron 25.0%
! CATTAGCATTTCATCATATT+GGG - chr7_3:63654488-63654507 None:intergenic 25.0%
! TCATTAGCATTTCATCATAT+TGG - chr7_3:63654489-63654508 None:intergenic 25.0%
TTGGAAAATACATGCTTGAA+GGG - chr7_3:63646839-63646858 None:intergenic 30.0%
TCCAGCAATGAAATTGAAAT+GGG - chr7_3:63646929-63646948 None:intergenic 30.0%
ATCCAGCAATGAAATTGAAA+TGG - chr7_3:63646930-63646949 None:intergenic 30.0%
TTTCAATTTCATTGCTGGAT+CGG + chr7_3:63646930-63646949 Msa1116100:five_prime_UTR 30.0%
!!! CGATGGAATTTTTAGTGAAA+TGG - chr7_3:63647192-63647211 None:intergenic 30.0%
! GATGATAGCATTGAAGATTT+CGG + chr7_3:63647236-63647255 Msa1116100:intron 30.0%
AGAGATAAAAAAAACCTCAC+TGG - chr7_3:63647346-63647365 None:intergenic 30.0%
GATAAAATATGGAGGACATT+CGG + chr7_3:63647564-63647583 Msa1116100:intron 30.0%
!!! ATTCGGCTGTTTGATTTTTT+CGG + chr7_3:63647581-63647600 Msa1116100:intron 30.0%
TGTTTGTCTTCATCTTCTTA+AGG + chr7_3:63647608-63647627 Msa1116100:intron 30.0%
! TTGAGATAGGTATTGTTAGA+TGG + chr7_3:63647795-63647814 Msa1116100:intron 30.0%
! TGAGATAGGTATTGTTAGAT+GGG + chr7_3:63647796-63647815 Msa1116100:intron 30.0%
ATTCTCATAATCACTTTCAC+TGG - chr7_3:63647938-63647957 None:intergenic 30.0%
! AAAACTGCAGGTTTTCATTA+AGG - chr7_3:63648000-63648019 None:intergenic 30.0%
CATCATCAGGTTTATTTCAA+TGG + chr7_3:63648086-63648105 Msa1116100:CDS 30.0%
! CAATTTAGGAATTTTCGTAC+TGG + chr7_3:63648220-63648239 Msa1116100:intron 30.0%
!! ATTTTTCGTTTTTCCTGTGA+AGG + chr7_3:63648262-63648281 Msa1116100:CDS 30.0%
! GTTTCTGTTTTCATCCTTTT+TGG + chr7_3:63648383-63648402 Msa1116100:intron 30.0%
!!! TTTTCATCCTTTTTGGTTGA+AGG + chr7_3:63648390-63648409 Msa1116100:intron 30.0%
TATTGTACCTTCAACCAAAA+AGG - chr7_3:63648400-63648419 None:intergenic 30.0%
ATCACCTATAAATCTACTCT+TGG + chr7_3:63648571-63648590 Msa1116100:intron 30.0%
GTTACCAAGAGTAGATTTAT+AGG - chr7_3:63648578-63648597 None:intergenic 30.0%
GCTATATGTTCAGATGTAAT+TGG + chr7_3:63648668-63648687 Msa1116100:intron 30.0%
AGATGCCTTAAAAGAAAAAG+AGG + chr7_3:63648705-63648724 Msa1116100:CDS 30.0%
TCAAATATAGAGGACCTAAA+AGG - chr7_3:63648840-63648859 None:intergenic 30.0%
GGATCAATATGCTATTAGAA+TGG + chr7_3:63648917-63648936 Msa1116100:CDS 30.0%
! CAAAAAATACTATGGTGCTA+TGG + chr7_3:63649004-63649023 Msa1116100:CDS 30.0%
! ATTATCATCTAAGATCAGCT+TGG - chr7_3:63649054-63649073 None:intergenic 30.0%
ATTGTCTGATTGTCATTAAC+AGG + chr7_3:63649171-63649190 Msa1116100:intron 30.0%
GTCAGATAAAGTAACCATTA+AGG - chr7_3:63649249-63649268 None:intergenic 30.0%
TCATAATACCAATTGTACTC+CGG - chr7_3:63649462-63649481 None:intergenic 30.0%
!!! TCCAGCAATAATTTTGATTC+TGG - chr7_3:63649505-63649524 None:intergenic 30.0%
GAATCAAAATTATTGCTGGA+AGG + chr7_3:63649505-63649524 Msa1116100:CDS 30.0%
TGTTCCTAGGTAAACAATTA+AGG + chr7_3:63649563-63649582 Msa1116100:intron 30.0%
GTTCCTAGGTAAACAATTAA+GGG + chr7_3:63649564-63649583 Msa1116100:intron 30.0%
!!! CCGTATATATTTTGATTGCT+TGG + chr7_3:63649614-63649633 Msa1116100:intron 30.0%
TTAAAGTTGAGATCACTGAT+TGG + chr7_3:63649957-63649976 Msa1116100:CDS 30.0%
ATTGGAATTTGGTACACAAT+TGG + chr7_3:63649975-63649994 Msa1116100:CDS 30.0%
GTACACAATTGGCAAAATTA+TGG + chr7_3:63649986-63650005 Msa1116100:CDS 30.0%
TGAGAAACATAACATTAAGG+TGG + chr7_3:63650054-63650073 Msa1116100:CDS 30.0%
TTGAATCACCAAACTCAATA+AGG - chr7_3:63650334-63650353 None:intergenic 30.0%
! CTTTAGACTATTTCCCATTT+TGG + chr7_3:63650617-63650636 Msa1116100:intron 30.0%
GAAACAAATAAAAGGCTGTA+GGG - chr7_3:63650666-63650685 None:intergenic 30.0%
ACAGTTGACAGAAAGATAAA+CGG - chr7_3:63650689-63650708 None:intergenic 30.0%
CAAACAGTTGAAACATCAAT+AGG - chr7_3:63650771-63650790 None:intergenic 30.0%
ATTGATGTTTCAACTGTTTG+AGG + chr7_3:63650771-63650790 Msa1116100:intron 30.0%
GTTACATTTCAAGCATACTT+TGG + chr7_3:63650997-63651016 Msa1116100:intron 30.0%
ACGTCTAATTAAGCTGTATA+TGG + chr7_3:63651423-63651442 Msa1116100:intron 30.0%
TCGTAGTTGCCATTAATTAA+GGG - chr7_3:63651806-63651825 None:intergenic 30.0%
ATCGTAGTTGCCATTAATTA+AGG - chr7_3:63651807-63651826 None:intergenic 30.0%
GAAAACGTAAAGAGTCTATT+TGG - chr7_3:63651835-63651854 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + chr7_3:63651909-63651928 Msa1116100:intron 30.0%
!!! CTTTTTTGTTTTTTTGGTGG+TGG - chr7_3:63651954-63651973 None:intergenic 30.0%
TGCACTAAAAAAAATCGATC+GGG - chr7_3:63652259-63652278 None:intergenic 30.0%
TTCCCATGTCAAAAAATTCT+TGG + chr7_3:63652372-63652391 Msa1116100:intron 30.0%
TTAACTATCGATGGAAATTG+AGG + chr7_3:63652463-63652482 Msa1116100:intron 30.0%
! AGGTAAAATTTGCCATTTCA+TGG + chr7_3:63652483-63652502 Msa1116100:intron 30.0%
GCCAATAAATTAACTACTCT+GGG - chr7_3:63652570-63652589 None:intergenic 30.0%
TGCCAATAAATTAACTACTC+TGG - chr7_3:63652571-63652590 None:intergenic 30.0%
!!! GCAATTTTTCAAGAAAAGGA+GGG - chr7_3:63652633-63652652 None:intergenic 30.0%
!!! AGCAATTTTTCAAGAAAAGG+AGG - chr7_3:63652634-63652653 None:intergenic 30.0%
!! TTTTCTAGCAAAAACTGAAG+TGG - chr7_3:63652661-63652680 None:intergenic 30.0%
!!! TGAATTTTAAAACCGGATCT+AGG + chr7_3:63652881-63652900 Msa1116100:intron 30.0%
!! AAAAGTACTTTCACACATTC+AGG - chr7_3:63653085-63653104 None:intergenic 30.0%
!!! GGCTAACTGTTTTTTATGTT+TGG - chr7_3:63653129-63653148 None:intergenic 30.0%
AATTAGTCACTGTTGAACTA+TGG - chr7_3:63653150-63653169 None:intergenic 30.0%
!!! GTTTTTTTCTGGTGGTTTTT+AGG + chr7_3:63653275-63653294 Msa1116100:intron 30.0%
TACATAGGAAAGGAAACAAA+GGG - chr7_3:63653343-63653362 None:intergenic 30.0%
ATACATAGGAAAGGAAACAA+AGG - chr7_3:63653344-63653363 None:intergenic 30.0%
!!! AAAAATTGAGGGGTATTTTG+AGG + chr7_3:63653446-63653465 Msa1116100:intron 30.0%
AATGCATCTTCTTCATTCTT+AGG - chr7_3:63653515-63653534 None:intergenic 30.0%
TAAGAATGAAGAAGATGCAT+TGG + chr7_3:63653514-63653533 Msa1116100:intron 30.0%
AAGAATGAAGAAGATGCATT+GGG + chr7_3:63653515-63653534 Msa1116100:intron 30.0%
! AAAAACTTCCTTACCTGTTT+TGG - chr7_3:63653720-63653739 None:intergenic 30.0%
!!! AACAGGTAAGGAAGTTTTTT+TGG + chr7_3:63653721-63653740 Msa1116100:intron 30.0%
!!! ACAGGTAAGGAAGTTTTTTT+GGG + chr7_3:63653722-63653741 Msa1116100:intron 30.0%
GTAATAAAGAACTAAACCTG+AGG - chr7_3:63654063-63654082 None:intergenic 30.0%
! ATTATTTGCTAGAAGGAAGA+AGG + chr7_3:63654097-63654116 Msa1116100:intron 30.0%
TTATGAGGTTGTTGTGATAT+CGG - chr7_3:63654213-63654232 None:intergenic 30.0%
ATTAAGTGGCAGAAATTTGA+AGG - chr7_3:63654240-63654259 None:intergenic 30.0%
!!! TTGGGAAAAGATTTGGTTTT+TGG - chr7_3:63654277-63654296 None:intergenic 30.0%
CTTGACCCTTTATGAAATTT+GGG - chr7_3:63654295-63654314 None:intergenic 30.0%
ACTTGACCCTTTATGAAATT+TGG - chr7_3:63654296-63654315 None:intergenic 30.0%
CTTGGAAAATACATGCTTGA+AGG - chr7_3:63646840-63646859 None:intergenic 35.0%
! CTTCAAGCATGTATTTTCCA+AGG + chr7_3:63646838-63646857 Msa1116100:five_prime_UTR 35.0%
TATGGTAAATTGAGAGAGAG+AGG - chr7_3:63646882-63646901 None:intergenic 35.0%
TCCCATTTCAATTTCATTGC+TGG + chr7_3:63646925-63646944 Msa1116100:five_prime_UTR 35.0%
TCATTCAATCCTTTGCAACA+TGG - chr7_3:63647305-63647324 None:intergenic 35.0%
AGAACAATGATTGTTCACTC+AGG - chr7_3:63647478-63647497 None:intergenic 35.0%
CTTAAGGACCTGCATATTTA+TGG + chr7_3:63647624-63647643 Msa1116100:intron 35.0%
! CATTCAATTTTGCAACGTAG+AGG - chr7_3:63647714-63647733 None:intergenic 35.0%
! TTATCGCTACTTTCTCCTAT+TGG + chr7_3:63647766-63647785 Msa1116100:intron 35.0%
CTATCTCAATTACCACCAAT+AGG - chr7_3:63647784-63647803 None:intergenic 35.0%
! CTATTGGTGGTAATTGAGAT+AGG + chr7_3:63647782-63647801 Msa1116100:intron 35.0%
! GTTAGATGGGCTTAATCATA+TGG + chr7_3:63647809-63647828 Msa1116100:intron 35.0%
GATTTGAGTAGTTCATCATC+AGG + chr7_3:63648073-63648092 Msa1116100:CDS 35.0%
CATCAGGTTTATTTCAATGG+TGG + chr7_3:63648089-63648108 Msa1116100:CDS 35.0%
! TTTTTCCTGTGAAGGTTTAG+TGG + chr7_3:63648270-63648289 Msa1116100:CDS 35.0%
AGGTACAATAATAACCCAAC+AGG + chr7_3:63648410-63648429 Msa1116100:intron 35.0%
GGTACAATAATAACCCAACA+GGG + chr7_3:63648411-63648430 Msa1116100:intron 35.0%
TAAAAAAGCTCTTCCCTGTT+GGG - chr7_3:63648427-63648446 None:intergenic 35.0%
TTAAAAAAGCTCTTCCCTGT+TGG - chr7_3:63648428-63648447 None:intergenic 35.0%
CAAGTAGAAAAGGAGAGTTA+AGG - chr7_3:63648509-63648528 None:intergenic 35.0%
CAGATGTAATTGGTATGTTG+TGG + chr7_3:63648678-63648697 Msa1116100:intron 35.0%
CAAGCTCATTGACATAACAT+TGG + chr7_3:63648744-63648763 Msa1116100:CDS 35.0%
AAATGTAAAATCACCACGAC+AGG - chr7_3:63648975-63648994 None:intergenic 35.0%
! TGTCGTGGTGATTTTACATT+TGG + chr7_3:63648974-63648993 Msa1116100:CDS 35.0%
! GTCGTGGTGATTTTACATTT+GGG + chr7_3:63648975-63648994 Msa1116100:CDS 35.0%
! TGATAATTTTCCGGATGCTA+AGG + chr7_3:63649067-63649086 Msa1116100:CDS 35.0%
CTGATTGTCATTAACAGGAT+TGG + chr7_3:63649176-63649195 Msa1116100:intron 35.0%
ATTGTCATTAACAGGATTGG+TGG + chr7_3:63649179-63649198 Msa1116100:intron 35.0%
! TTCTATTTGTGGTATTGAGC+CGG + chr7_3:63649440-63649459 Msa1116100:CDS 35.0%
GCCAGAATCAAAATTATTGC+TGG + chr7_3:63649501-63649520 Msa1116100:CDS 35.0%
TGACCCTTAATTGTTTACCT+AGG - chr7_3:63649570-63649589 None:intergenic 35.0%
!! ATCCTTTTTGACTGTAACGT+CGG + chr7_3:63649733-63649752 Msa1116100:CDS 35.0%
TGTAACGTCGGAAATTATGT+GGG + chr7_3:63649745-63649764 Msa1116100:CDS 35.0%
TCAAGACATAATTGATGCTC+AGG + chr7_3:63649777-63649796 Msa1116100:CDS 35.0%
CAAGACATAATTGATGCTCA+GGG + chr7_3:63649778-63649797 Msa1116100:CDS 35.0%
AAGACATAATTGATGCTCAG+GGG + chr7_3:63649779-63649798 Msa1116100:CDS 35.0%
TGATTATCTGCTTACACTAC+AGG + chr7_3:63649874-63649893 Msa1116100:intron 35.0%
! TGAGATCACTGATTGGAATT+TGG + chr7_3:63649964-63649983 Msa1116100:CDS 35.0%
ATGATGCTGATCTGATCAAA+AGG + chr7_3:63650026-63650045 Msa1116100:CDS 35.0%
! TTGTTTTCAGATTGCTGAAG+AGG + chr7_3:63650150-63650169 Msa1116100:intron 35.0%
AATGTTCCGCTAACACATAT+TGG + chr7_3:63650190-63650209 Msa1116100:CDS 35.0%
GTTTCACCAATATGTGTTAG+CGG - chr7_3:63650199-63650218 None:intergenic 35.0%
ACATATTGGTGAAACGCAAT+TGG + chr7_3:63650204-63650223 Msa1116100:CDS 35.0%
!! CAATAAGGTGGCTTTGTAAA+TGG - chr7_3:63650319-63650338 None:intergenic 35.0%
AATCACCAAACTCAATAAGG+TGG - chr7_3:63650331-63650350 None:intergenic 35.0%
! TTTGGTGATTCAACCAAAAC+TGG + chr7_3:63650341-63650360 Msa1116100:CDS 35.0%
! TTGGTGATTCAACCAAAACT+GGG + chr7_3:63650342-63650361 Msa1116100:CDS 35.0%
TGATCTTTCTCCAATCTCTT+CGG - chr7_3:63650456-63650475 None:intergenic 35.0%
TTGACACATATCATCTTCTG+CGG - chr7_3:63650488-63650507 None:intergenic 35.0%
AGGTTGAGAAACTGAACTAA+TGG + chr7_3:63650507-63650526 Msa1116100:intron 35.0%
GGTTGAGAAACTGAACTAAT+GGG + chr7_3:63650508-63650527 Msa1116100:intron 35.0%
GTTGAGAAACTGAACTAATG+GGG + chr7_3:63650509-63650528 Msa1116100:intron 35.0%
GGAAACAAATAAAAGGCTGT+AGG - chr7_3:63650667-63650686 None:intergenic 35.0%
CAGTTGACAGAAAGATAAAC+GGG - chr7_3:63650688-63650707 None:intergenic 35.0%
ACAGTTGAAACATCAATAGG+AGG - chr7_3:63650768-63650787 None:intergenic 35.0%
TTAGTCTGCTTAAATGCAAC+AGG + chr7_3:63651460-63651479 Msa1116100:intron 35.0%
TTAACTATATATGACCCGTG+CGG + chr7_3:63651668-63651687 Msa1116100:intron 35.0%
TGCATAAAATATGCAAGGTC+TGG + chr7_3:63651914-63651933 Msa1116100:intron 35.0%
GCATAAAATATGCAAGGTCT+GGG + chr7_3:63651915-63651934 Msa1116100:intron 35.0%
CATAAAATATGCAAGGTCTG+GGG + chr7_3:63651916-63651935 Msa1116100:intron 35.0%
GCACTAAAAAAAATCGATCG+GGG - chr7_3:63652258-63652277 None:intergenic 35.0%
AACTTTCGATGGATGTTAAC+TGG + chr7_3:63652434-63652453 Msa1116100:intron 35.0%
GGCTAAGAAAAACCATGAAA+TGG - chr7_3:63652498-63652517 None:intergenic 35.0%
GCCCAGAGTAGTTAATTTAT+TGG + chr7_3:63652566-63652585 Msa1116100:intron 35.0%
TGTTAAGCCCAAATCTCATT+GGG - chr7_3:63652595-63652614 None:intergenic 35.0%
TTGTTAAGCCCAAATCTCAT+TGG - chr7_3:63652596-63652615 None:intergenic 35.0%
TTAAAACCGGATCTAGGTAA+AGG + chr7_3:63652887-63652906 Msa1116100:intron 35.0%
! GAAAAAAACAGCAAAAGTGC+AGG - chr7_3:63653264-63653283 None:intergenic 35.0%
!!! GCACTTTTGCTGTTTTTTTC+TGG + chr7_3:63653264-63653283 Msa1116100:intron 35.0%
!!! CTTTTGCTGTTTTTTTCTGG+TGG + chr7_3:63653267-63653286 Msa1116100:intron 35.0%
!!! GGTTTTTAGGCTTGTTGTTT+CGG + chr7_3:63653288-63653307 Msa1116100:intron 35.0%
! ATTGGGTTGTGAAACATTTC+AGG + chr7_3:63653532-63653551 Msa1116100:intron 35.0%
!!! CAGGTAAGGAAGTTTTTTTG+GGG + chr7_3:63653723-63653742 Msa1116100:intron 35.0%
!!! AGGTAAGGAAGTTTTTTTGG+GGG + chr7_3:63653724-63653743 Msa1116100:intron 35.0%
!!! AGTTTTTTTGGGGGTTCTTT+AGG + chr7_3:63653733-63653752 Msa1116100:intron 35.0%
! GTTTAAAGAAAAGTGTGACG+TGG - chr7_3:63654019-63654038 None:intergenic 35.0%
!! AAATTTGAAGGTGGGTTATG+AGG - chr7_3:63654228-63654247 None:intergenic 35.0%
AAACTCAACTTTGCCATTGA+AGG - chr7_3:63654566-63654585 None:intergenic 35.0%
TCGGATAAAACGATAAGTGA+AGG - chr7_3:63654656-63654675 None:intergenic 35.0%
GTAAATTGAGAGAGAGAGGT+CGG - chr7_3:63646878-63646897 None:intergenic 40.0%
GAGAGAGAAAGAGGAAGATA+TGG - chr7_3:63646900-63646919 None:intergenic 40.0%
! TTTTTGTGGTGGTTCAGATC+TGG - chr7_3:63646968-63646987 None:intergenic 40.0%
ACTCCACTGGAGTTGAAAAA+GGG - chr7_3:63647025-63647044 None:intergenic 40.0%
AACTCCACTGGAGTTGAAAA+AGG - chr7_3:63647026-63647045 None:intergenic 40.0%
TGCAAAGGATTGAATGACCA+AGG + chr7_3:63647308-63647327 Msa1116100:intron 40.0%
ACTGGAGTAACTTTCAACCT+TGG - chr7_3:63647328-63647347 None:intergenic 40.0%
! ATTTTGCAACGTAGAGGTGA+TGG - chr7_3:63647708-63647727 None:intergenic 40.0%
CAAAATTGAATGTATGCCGC+TGG + chr7_3:63647722-63647741 Msa1116100:CDS 40.0%
GCGATAAATGTTCAACCTGA+AGG - chr7_3:63647753-63647772 None:intergenic 40.0%
!! GAAAACCTGCAGTTTTGATC+AGG + chr7_3:63648004-63648023 Msa1116100:intron 40.0%
AAATGCCTGATCAAAACTGC+AGG - chr7_3:63648012-63648031 None:intergenic 40.0%
AGTGACAATATAGCTTCCCA+TGG + chr7_3:63648125-63648144 Msa1116100:intron 40.0%
AAGTGTGAGATGAGAACCAT+GGG - chr7_3:63648144-63648163 None:intergenic 40.0%
AAAGTGTGAGATGAGAACCA+TGG - chr7_3:63648145-63648164 None:intergenic 40.0%
GTAGAAAAGGAGAGTTAAGG+TGG - chr7_3:63648506-63648525 None:intergenic 40.0%
GCTCATTGACATAACATTGG+AGG + chr7_3:63648747-63648766 Msa1116100:CDS 40.0%
TTATGTGGTACGACTGTTAC+AGG + chr7_3:63648868-63648887 Msa1116100:intron 40.0%
TATGTGGTACGACTGTTACA+GGG + chr7_3:63648869-63648888 Msa1116100:intron 40.0%
ATTGATCCCACAAAGAACAG+TGG - chr7_3:63648905-63648924 None:intergenic 40.0%
CTATTAGAATGGATGCTCAC+TGG + chr7_3:63648928-63648947 Msa1116100:CDS 40.0%
! TCAAGCATCTGGAACCTTAA+TGG + chr7_3:63649232-63649251 Msa1116100:CDS 40.0%
AGAATTGATTGAGTCGTCTG+AGG + chr7_3:63649301-63649320 Msa1116100:CDS 40.0%
CATTGCATTGCTACAGATGA+TGG - chr7_3:63649407-63649426 None:intergenic 40.0%
TTCCGACGTTACAGTCAAAA+AGG - chr7_3:63649738-63649757 None:intergenic 40.0%
CTGTAACGTCGGAAATTATG+TGG + chr7_3:63649744-63649763 Msa1116100:CDS 40.0%
CGAATTGGCAAGGTTAATAC+AGG - chr7_3:63649832-63649851 None:intergenic 40.0%
GTATTAACCTTGCCAATTCG+TGG + chr7_3:63649832-63649851 Msa1116100:intron 40.0%
TCAAAAGCCATACCACGAAT+TGG - chr7_3:63649847-63649866 None:intergenic 40.0%
! GGCAAAATTATGGTGTCAAG+AGG + chr7_3:63649996-63650015 Msa1116100:CDS 40.0%
TATTGGTGAAACGCAATTGG+AGG + chr7_3:63650207-63650226 Msa1116100:CDS 40.0%
CAAAGCCACCTTATTGAGTT+TGG + chr7_3:63650323-63650342 Msa1116100:intron 40.0%
AACCAAAACTGGGAATGATC+TGG + chr7_3:63650352-63650371 Msa1116100:CDS 40.0%
GCAGAAGATGATATGTGTCA+AGG + chr7_3:63650487-63650506 Msa1116100:CDS 40.0%
TCTGATACCAGATTCTGTGT+TGG + chr7_3:63650566-63650585 Msa1116100:intron 40.0%
TTATAGTTGGGGAAGCCTTA+AGG + chr7_3:63651348-63651367 Msa1116100:intron 40.0%
TTAGTCTCTACAATCCATGG+AGG - chr7_3:63651375-63651394 None:intergenic 40.0%
TGCTTAGTCTCTACAATCCA+TGG - chr7_3:63651378-63651397 None:intergenic 40.0%
AATGCAACAGGACACATGTT+TGG + chr7_3:63651472-63651491 Msa1116100:intron 40.0%
AAAGTACGATCAAGACACGA+CGG - chr7_3:63651568-63651587 None:intergenic 40.0%
GGATCCACACCCTTAATTAA+TGG + chr7_3:63651794-63651813 Msa1116100:intron 40.0%
GTTGCCATTAATTAAGGGTG+TGG - chr7_3:63651801-63651820 None:intergenic 40.0%
AGCAGTGTCTTTCAAAAGCA+AGG - chr7_3:63651857-63651876 None:intergenic 40.0%
TCATTAATGAAGAGGAGCCT+CGG + chr7_3:63652288-63652307 Msa1116100:intron 40.0%
! AACTGCCGATGAGGTTATTT+TGG - chr7_3:63652414-63652433 None:intergenic 40.0%
TGGCAGTAGTTAACTATCGA+TGG + chr7_3:63652454-63652473 Msa1116100:intron 40.0%
!! TGGTTTTTCTTAGCCTTCTG+CGG + chr7_3:63652503-63652522 Msa1116100:intron 40.0%
AACGGTAACTAACTACCGTT+CGG - chr7_3:63652754-63652773 None:intergenic 40.0%
AAAATTGAGACTGCTGTGCA+AGG + chr7_3:63653219-63653238 Msa1116100:intron 40.0%
!!! TAGGCTTGTTGTTTCGGTTT+TGG + chr7_3:63653294-63653313 Msa1116100:intron 40.0%
!!! AGGCTTGTTGTTTCGGTTTT+GGG + chr7_3:63653295-63653314 Msa1116100:intron 40.0%
!!! TTGTTGTTTCGGTTTTGGGT+TGG + chr7_3:63653299-63653318 Msa1116100:intron 40.0%
!!! TGTTGTTTCGGTTTTGGGTT+GGG + chr7_3:63653300-63653319 Msa1116100:intron 40.0%
!! CCAATTCATGAGAGAGTGTT+CGG - chr7_3:63653995-63654014 None:intergenic 40.0%
CGAACACTCTCTCATGAATT+GGG + chr7_3:63653993-63654012 Msa1116100:intron 40.0%
TGTTACACATGAGTCATAGC+AGG - chr7_3:63654168-63654187 None:intergenic 40.0%
AGTGGCAGAAATTTGAAGGT+GGG - chr7_3:63654236-63654255 None:intergenic 40.0%
AAGTGGCAGAAATTTGAAGG+TGG - chr7_3:63654237-63654256 None:intergenic 40.0%
AAGCCAATAATTGGCAGATC+TGG + chr7_3:63654355-63654374 Msa1116100:intron 40.0%
AGCCAATAATTGGCAGATCT+GGG + chr7_3:63654356-63654375 Msa1116100:intron 40.0%
AACCCAGATCTGCCAATTAT+TGG - chr7_3:63654361-63654380 None:intergenic 40.0%
GTGAATTAAGGGCTGAATTG+TGG + chr7_3:63654406-63654425 Msa1116100:intron 40.0%
GACAAGAAGCTCAAATTTGC+AGG - chr7_3:63654453-63654472 None:intergenic 40.0%
!!! GTTTTGGTTCGATCCTTCAA+TGG + chr7_3:63654550-63654569 Msa1116100:CDS 40.0%
GAGTTTCTTCTTCGTTGTTC+TGG + chr7_3:63654580-63654599 Msa1116100:CDS 40.0%
! TCTTCTTCGTTGTTCTGGTT+TGG + chr7_3:63654585-63654604 Msa1116100:CDS 40.0%
TGGTGGTTCAGATCTGGTTA+TGG - chr7_3:63646962-63646981 None:intergenic 45.0%
AACTCCAGTGGAGTTGAACT+CGG + chr7_3:63647031-63647050 Msa1116100:five_prime_UTR 45.0%
GGTTGAAAGTTACTCCAGTG+AGG + chr7_3:63647329-63647348 Msa1116100:intron 45.0%
GACCTGCATATTTATGGCTC+TGG + chr7_3:63647630-63647649 Msa1116100:CDS 45.0%
CACCAGAGCCATAAATATGC+AGG - chr7_3:63647635-63647654 None:intergenic 45.0%
! TCGCTACTTTCTCCTATTGG+TGG + chr7_3:63647769-63647788 Msa1116100:intron 45.0%
CTTTGCCACTAAACCTTCAC+AGG - chr7_3:63648278-63648297 None:intergenic 45.0%
!! TGACGTGCAAGCATTGAAAC+TGG + chr7_3:63648357-63648376 Msa1116100:intron 45.0%
ATGTGGTACGACTGTTACAG+GGG + chr7_3:63648870-63648889 Msa1116100:intron 45.0%
AGAGGATCCACTGTTCTTTG+TGG + chr7_3:63648895-63648914 Msa1116100:CDS 45.0%
GAGGATCCACTGTTCTTTGT+GGG + chr7_3:63648896-63648915 Msa1116100:CDS 45.0%
! GGTGTCTCGAATGCCTTTTA+TGG + chr7_3:63649026-63649045 Msa1116100:CDS 45.0%
!! GATCAGCTTGGTGCCATAAA+AGG - chr7_3:63649042-63649061 None:intergenic 45.0%
CTACGATACTCCTTAGCATC+CGG - chr7_3:63649080-63649099 None:intergenic 45.0%
CAAGGTCTTAGTCAAGCATC+TGG + chr7_3:63649221-63649240 Msa1116100:CDS 45.0%
GTATTGAGCCGGAGTACAAT+TGG + chr7_3:63649451-63649470 Msa1116100:CDS 45.0%
TGATGCATGTACCAAGTGTG+CGG + chr7_3:63649479-63649498 Msa1116100:CDS 45.0%
TTAAGGGTCACGCTCATACA+AGG + chr7_3:63649580-63649599 Msa1116100:intron 45.0%
!! CAGATTCAAGTTGCATGTCC+AGG + chr7_3:63649681-63649700 Msa1116100:intron 45.0%
ATCCTGTATTGTCCATCACC+TGG - chr7_3:63649702-63649721 None:intergenic 45.0%
ACGTCGGAAATTATGTGGGA+AGG + chr7_3:63649749-63649768 Msa1116100:CDS 45.0%
AACCTTGCCAATTCGTGGTA+TGG + chr7_3:63649837-63649856 Msa1116100:intron 45.0%
! CACCAGATCATTCCCAGTTT+TGG - chr7_3:63650357-63650376 None:intergenic 45.0%
CAAAACTGGGAATGATCTGG+TGG + chr7_3:63650355-63650374 Msa1116100:CDS 45.0%
CAAACACCTGGTAGCAAATC+TGG + chr7_3:63650386-63650405 Msa1116100:CDS 45.0%
GTAGCAAATCTGGAGGGAAA+AGG + chr7_3:63650396-63650415 Msa1116100:CDS 45.0%
GCAGAGGATTCTGCTATACT+TGG + chr7_3:63650428-63650447 Msa1116100:CDS 45.0%
! ATACTTGGCACCGAAGAGAT+TGG + chr7_3:63650443-63650462 Msa1116100:CDS 45.0%
GAGAAACTGAACTAATGGGG+AGG + chr7_3:63650512-63650531 Msa1116100:intron 45.0%
!! ACCAGATTCTGTGTTGGTTC+TGG + chr7_3:63650572-63650591 Msa1116100:intron 45.0%
TCCAGAACCAACACAGAATC+TGG - chr7_3:63650576-63650595 None:intergenic 45.0%
ATAAAAGGCTGTAGGGCCTA+AGG - chr7_3:63650659-63650678 None:intergenic 45.0%
ATGACCATTCACAAACCGAC+GGG - chr7_3:63651023-63651042 None:intergenic 45.0%
GATGACCATTCACAAACCGA+CGG - chr7_3:63651024-63651043 None:intergenic 45.0%
ACAATCCATGGAGGTCCTTA+AGG - chr7_3:63651366-63651385 None:intergenic 45.0%
! TGAGTTTAGCTCGGTTGGTT+TGG + chr7_3:63651887-63651906 Msa1116100:intron 45.0%
TGGGGGTTACAAGTTTCAAC+TGG + chr7_3:63652314-63652333 Msa1116100:intron 45.0%
TCGAAAGTTAACTGCCGATG+AGG - chr7_3:63652423-63652442 None:intergenic 45.0%
CATCGGCAGTTAACTTTCGA+TGG + chr7_3:63652423-63652442 Msa1116100:intron 45.0%
! TGTTGTTTACACTCCGCAGA+AGG - chr7_3:63652519-63652538 None:intergenic 45.0%
ATTGGCAGCCCAATGAGATT+TGG + chr7_3:63652584-63652603 Msa1116100:intron 45.0%
TTGGCAGCCCAATGAGATTT+GGG + chr7_3:63652585-63652604 Msa1116100:intron 45.0%
TTCGGGAACAGAGAAAACGA+AGG - chr7_3:63652736-63652755 None:intergenic 45.0%
! TCGTTTTCTCTGTTCCCGAA+CGG + chr7_3:63652736-63652755 Msa1116100:intron 45.0%
ACGGTAACTAACTACCGTTC+GGG - chr7_3:63652753-63652772 None:intergenic 45.0%
TCCTCTCCTTTACCTAGATC+CGG - chr7_3:63652896-63652915 None:intergenic 45.0%
!!! TTTCGGTTTTGGGTTGGGAT+TGG + chr7_3:63653305-63653324 Msa1116100:intron 45.0%
!!! TTCGGTTTTGGGTTGGGATT+GGG + chr7_3:63653306-63653325 Msa1116100:intron 45.0%
CCGAACACTCTCTCATGAAT+TGG + chr7_3:63653992-63654011 Msa1116100:intron 45.0%
!! AACTTGTTTACTGGCTCCTC+AGG + chr7_3:63654044-63654063 Msa1116100:intron 45.0%
TGCTAGAAGGAAGAAGGATC+TGG + chr7_3:63654103-63654122 Msa1116100:intron 45.0%
GAAGGAAGAAGGATCTGGAA+AGG + chr7_3:63654108-63654127 Msa1116100:intron 45.0%
AGAGGTGGTTCTTCTCTTAC+TGG - chr7_3:63654619-63654638 None:intergenic 45.0%
GAAGAACCACCTCTCATTTG+CGG + chr7_3:63654625-63654644 Msa1116100:CDS 45.0%
TTATCCGATTACGTCGAGCT+TGG + chr7_3:63654668-63654687 Msa1116100:CDS 45.0%
!!! ATTTTTTGATTTTTTTTAAA+CGG - chr7_3:63653432-63653451 None:intergenic 5.0%
!! TTAATTTATTTAATGTTTAT+TGG - chr7_3:63654328-63654347 None:intergenic 5.0%
CGGTGAACATAAGGTTGCCT+TGG - chr7_3:63646858-63646877 None:intergenic 50.0%
GAGAGAGGTCGGTGAACATA+AGG - chr7_3:63646867-63646886 None:intergenic 50.0%
! GGGAGTGTAGAGAGAGAAAG+AGG - chr7_3:63646909-63646928 None:intergenic 50.0%
CCACTGGAGTTGAAAAAGGG+AGG - chr7_3:63647022-63647041 None:intergenic 50.0%
!!! CCTCCCTTTTTCAACTCCAG+TGG + chr7_3:63647019-63647038 Msa1116100:five_prime_UTR 50.0%
AGTCGTGATGGTAACAGCGA+GGG + chr7_3:63647073-63647092 Msa1116100:CDS 50.0%
TCGCGACGATAACAACGAGA+AGG + chr7_3:63647108-63647127 Msa1116100:CDS 50.0%
CATCATGCGCCATGTTGCAA+AGG + chr7_3:63647293-63647312 Msa1116100:intron 50.0%
TGTTCTCAGCAACTTCCACC+CGG + chr7_3:63647663-63647682 Msa1116100:CDS 50.0%
! TGCAACGTAGAGGTGATGGT+GGG - chr7_3:63647704-63647723 None:intergenic 50.0%
! TTGCAACGTAGAGGTGATGG+TGG - chr7_3:63647705-63647724 None:intergenic 50.0%
ACGACTGTTACAGGGGTAAG+AGG + chr7_3:63648877-63648896 Msa1116100:intron 50.0%
TCACCACGACAGGAGAGTTT+GGG - chr7_3:63648965-63648984 None:intergenic 50.0%
ATCACCACGACAGGAGAGTT+TGG - chr7_3:63648966-63648985 None:intergenic 50.0%
!! GATTGGTGGTGCTGCAATTG+AGG + chr7_3:63649193-63649212 Msa1116100:CDS 50.0%
TTTGATTCTGGCCGCACACT+TGG - chr7_3:63649493-63649512 None:intergenic 50.0%
GTGCTAGATGCAATCAGAGC+AGG + chr7_3:63649535-63649554 Msa1116100:CDS 50.0%
AGAGCAGGAATGCTGTTCCT+AGG + chr7_3:63649550-63649569 Msa1116100:CDS 50.0%
CAAGTTGCATGTCCAGGTGA+TGG + chr7_3:63649687-63649706 Msa1116100:CDS 50.0%
!! GTCCAGGTGATGGACAATAC+AGG + chr7_3:63649697-63649716 Msa1116100:CDS 50.0%
CATAATTGATGCTCAGGGGC+AGG + chr7_3:63649783-63649802 Msa1116100:CDS 50.0%
AGCCATACCACGAATTGGCA+AGG - chr7_3:63649842-63649861 None:intergenic 50.0%
CTACAGGCCAGCAATTCTCT+TGG + chr7_3:63649890-63649909 Msa1116100:intron 50.0%
GGGGTAACCAAGAGAATTGC+TGG - chr7_3:63649900-63649919 None:intergenic 50.0%
TCTTGGTTACCCCAAAGAGC+TGG + chr7_3:63649907-63649926 Msa1116100:CDS 50.0%
CTTGGTTACCCCAAAGAGCT+GGG + chr7_3:63649908-63649927 Msa1116100:CDS 50.0%
TTGGTTACCCCAAAGAGCTG+GGG + chr7_3:63649909-63649928 Msa1116100:CDS 50.0%
GTGGATAACGAGCAAACACC+TGG + chr7_3:63650374-63650393 Msa1116100:CDS 50.0%
ACACCTGGTAGCAAATCTGG+AGG + chr7_3:63650389-63650408 Msa1116100:CDS 50.0%
CACCTGGTAGCAAATCTGGA+GGG + chr7_3:63650390-63650409 Msa1116100:CDS 50.0%
!! TTCCCTCCAGATTTGCTACC+AGG - chr7_3:63650395-63650414 None:intergenic 50.0%
GAAAAGGTCTGCTGATGCAG+AGG + chr7_3:63650412-63650431 Msa1116100:CDS 50.0%
TCAAGCATACTTTGGCCCGT+CGG + chr7_3:63651005-63651024 Msa1116100:intron 50.0%
CGATCAAGACACGACGGTAT+TGG - chr7_3:63651562-63651581 None:intergenic 50.0%
CTGTCCTCGTGAGTTTAGCT+CGG + chr7_3:63651878-63651897 Msa1116100:intron 50.0%
ATGAAGAGGAGCCTCGGTAT+TGG + chr7_3:63652294-63652313 Msa1116100:intron 50.0%
TGAAGAGGAGCCTCGGTATT+GGG + chr7_3:63652295-63652314 Msa1116100:intron 50.0%
ACTTGTAACCCCCAATACCG+AGG - chr7_3:63652308-63652327 None:intergenic 50.0%
ACCGGATCTAGGTAAAGGAG+AGG + chr7_3:63652892-63652911 Msa1116100:intron 50.0%
!!! TCGGTTTTGGGTTGGGATTG+GGG + chr7_3:63653307-63653326 Msa1116100:intron 50.0%
! GCAAGATGCACTGACAAGCT+CGG - chr7_3:63653384-63653403 None:intergenic 50.0%
GCTTGTCAGTGCATCTTGCA+CGG + chr7_3:63653385-63653404 Msa1116100:intron 50.0%
CTTGTCAGTGCATCTTGCAC+GGG + chr7_3:63653386-63653405 Msa1116100:intron 50.0%
ATCAGTCGCCTGTACACTCT+CGG + chr7_3:63653969-63653988 Msa1116100:intron 50.0%
!! AGGATCTGGAAAGGTATCGC+TGG + chr7_3:63654117-63654136 Msa1116100:intron 50.0%
TAGCAGGTGTGTTGTGGCAT+AGG - chr7_3:63654152-63654171 None:intergenic 50.0%
GAGTCATAGCAGGTGTGTTG+TGG - chr7_3:63654158-63654177 None:intergenic 50.0%
TTGGCAGATCTGGGTTCGAA+TGG + chr7_3:63654365-63654384 Msa1116100:intron 50.0%
GATCTGGGTTCGAATGGATC+TGG + chr7_3:63654371-63654390 Msa1116100:intron 50.0%
GGTGGTTCTTCTCTTACTGG+TGG - chr7_3:63654616-63654635 None:intergenic 50.0%
ATCGCCAAGCTCGACGTAAT+CGG - chr7_3:63654675-63654694 None:intergenic 50.0%
TCCAGTGGAGTTGAACTCGG+CGG + chr7_3:63647034-63647053 Msa1116100:five_prime_UTR 55.0%
CACGACTCGTTGCCATGGAT+CGG - chr7_3:63647060-63647079 None:intergenic 55.0%
TCCATGGCAACGAGTCGTGA+TGG + chr7_3:63647061-63647080 Msa1116100:exon 55.0%
ACCATCACGACTCGTTGCCA+TGG - chr7_3:63647065-63647084 None:intergenic 55.0%
GAGTCGTGATGGTAACAGCG+AGG + chr7_3:63647072-63647091 Msa1116100:CDS 55.0%
GTTATCGTCGCGACTCGTTG+AGG - chr7_3:63647101-63647120 None:intergenic 55.0%
!! CGTAGAGGTGATGGTGGGAA+GGG - chr7_3:63647699-63647718 None:intergenic 55.0%
!! ACGTAGAGGTGATGGTGGGA+AGG - chr7_3:63647700-63647719 None:intergenic 55.0%
CAACCTGAAGGTGACACCAG+CGG - chr7_3:63647741-63647760 None:intergenic 55.0%
!! TGGTGGTGCTGCAATTGAGG+TGG + chr7_3:63649196-63649215 Msa1116100:CDS 55.0%
GCTGCAATTGAGGTGGCTCA+AGG + chr7_3:63649203-63649222 Msa1116100:CDS 55.0%
ACCAACAGCCCCAGCTCTTT+GGG - chr7_3:63649920-63649939 None:intergenic 55.0%
AACCAACAGCCCCAGCTCTT+TGG - chr7_3:63649921-63649940 None:intergenic 55.0%
AAAGAGCTGGGGCTGTTGGT+TGG + chr7_3:63649920-63649939 Msa1116100:CDS 55.0%
!! TTGGCCCGTCGGTTTGTGAA+TGG + chr7_3:63651016-63651035 Msa1116100:intron 55.0%
GGAAGCCTTAAGGACCTCCA+TGG + chr7_3:63651358-63651377 Msa1116100:intron 55.0%
GCGCGCAAGAATAGCACGAA+CGG + chr7_3:63651773-63651792 Msa1116100:intron 55.0%
CCAACCGAGCTAAACTCACG+AGG - chr7_3:63651885-63651904 None:intergenic 55.0%
! CCTCGTGAGTTTAGCTCGGT+TGG + chr7_3:63651882-63651901 Msa1116100:intron 55.0%
GAAGAGGAGCCTCGGTATTG+GGG + chr7_3:63652296-63652315 Msa1116100:intron 55.0%
! AAGAGGAGCCTCGGTATTGG+GGG + chr7_3:63652297-63652316 Msa1116100:intron 55.0%
CACGGGCACGAGAGAGAAAA+GGG - chr7_3:63652835-63652854 None:intergenic 55.0%
TCACGGGCACGAGAGAGAAA+AGG - chr7_3:63652836-63652855 None:intergenic 55.0%
! CAAAAGTGCAGGACAGCAGC+AGG - chr7_3:63653253-63653272 None:intergenic 55.0%
AAGGAGACGCCGCAAATGAG+AGG - chr7_3:63654637-63654656 None:intergenic 55.0%
!! ATGCCGCTGGTGTCACCTTC+AGG + chr7_3:63647735-63647754 Msa1116100:CDS 60.0%
CGACCCAAACTCTCCTGTCG+TGG + chr7_3:63648959-63648978 Msa1116100:CDS 60.0%
CCAACAGCCCCAGCTCTTTG+GGG - chr7_3:63649919-63649938 None:intergenic 60.0%
TGAGGGCTGCGTGAGAAGTG+TGG + chr7_3:63653477-63653496 Msa1116100:intron 60.0%
! GAGGGCTGCGTGAGAAGTGT+GGG + chr7_3:63653478-63653497 Msa1116100:intron 60.0%
! AGGGCTGCGTGAGAAGTGTG+GGG + chr7_3:63653479-63653498 Msa1116100:intron 60.0%
! GTGTTCGGCCGAGAGTGTAC+AGG - chr7_3:63653980-63653999 None:intergenic 60.0%
GAGACGCCGCAAATGAGAGG+TGG - chr7_3:63654634-63654653 None:intergenic 60.0%
GCCGCCGAGTTCAACTCCAC+TGG - chr7_3:63647038-63647057 None:intergenic 65.0%
TGAACTCGGCGGCCGATCCA+TGG + chr7_3:63647045-63647064 Msa1116100:exon 65.0%
! TGGGAAGGGCGTGGTTGAGC+CGG - chr7_3:63647685-63647704 None:intergenic 65.0%
!! AGGTGATGGTGGGAAGGGCG+TGG - chr7_3:63647694-63647713 None:intergenic 65.0%
CCCCAAAGAGCTGGGGCTGT+TGG + chr7_3:63649916-63649935 Msa1116100:CDS 65.0%
TATGACCCGTGCGGCAGCAC+AGG + chr7_3:63651677-63651696 Msa1116100:intron 65.0%
GTCTACCTGTGCTGCCGCAC+GGG - chr7_3:63651685-63651704 None:intergenic 65.0%
CGTCTACCTGTGCTGCCGCA+CGG - chr7_3:63651686-63651705 None:intergenic 65.0%
! AAGGGCGTGGTTGAGCCGGG+TGG - chr7_3:63647681-63647700 None:intergenic 70.0%
! GGGAAGGGCGTGGTTGAGCC+GGG - chr7_3:63647684-63647703 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 63646831 63654696 63646831 ID=Msa1116100;Name=Msa1116100
chr7_3 mRNA 63646831 63654696 63646831 ID=Msa1116100-mRNA-1;Parent=Msa1116100;Name=Msa1116100-mRNA-1;_AED=0.30;_eAED=0.36;_QI=233|0.38|0.5|0.85|1|1|14|0|573
chr7_3 exon 63646831 63647129 63646831 ID=Msa1116100-mRNA-1:exon:14958;Parent=Msa1116100-mRNA-1
chr7_3 exon 63647630 63647756 63647630 ID=Msa1116100-mRNA-1:exon:14959;Parent=Msa1116100-mRNA-1
chr7_3 exon 63648026 63648113 63648026 ID=Msa1116100-mRNA-1:exon:14960;Parent=Msa1116100-mRNA-1
chr7_3 exon 63648228 63648296 63648228 ID=Msa1116100-mRNA-1:exon:14961;Parent=Msa1116100-mRNA-1
chr7_3 exon 63648681 63648776 63648681 ID=Msa1116100-mRNA-1:exon:14962;Parent=Msa1116100-mRNA-1
chr7_3 exon 63648890 63649102 63648890 ID=Msa1116100-mRNA-1:exon:14963;Parent=Msa1116100-mRNA-1
chr7_3 exon 63649193 63649322 63649193 ID=Msa1116100-mRNA-1:exon:14964;Parent=Msa1116100-mRNA-1
chr7_3 exon 63649417 63649571 63649417 ID=Msa1116100-mRNA-1:exon:14965;Parent=Msa1116100-mRNA-1
chr7_3 exon 63649684 63649804 63649684 ID=Msa1116100-mRNA-1:exon:14966;Parent=Msa1116100-mRNA-1
chr7_3 exon 63649896 63650075 63649896 ID=Msa1116100-mRNA-1:exon:14967;Parent=Msa1116100-mRNA-1
chr7_3 exon 63650160 63650228 63650160 ID=Msa1116100-mRNA-1:exon:14968;Parent=Msa1116100-mRNA-1
chr7_3 exon 63650341 63650508 63650341 ID=Msa1116100-mRNA-1:exon:14969;Parent=Msa1116100-mRNA-1
chr7_3 exon 63654109 63654129 63654109 ID=Msa1116100-mRNA-1:exon:14970;Parent=Msa1116100-mRNA-1
chr7_3 exon 63654478 63654696 63654478 ID=Msa1116100-mRNA-1:exon:14971;Parent=Msa1116100-mRNA-1
chr7_3 five_prime_UTR 63646831 63647063 63646831 ID=Msa1116100-mRNA-1:five_prime_utr;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63647064 63647129 63647064 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63647630 63647756 63647630 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63648026 63648113 63648026 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63648228 63648296 63648228 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63648681 63648776 63648681 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63648890 63649102 63648890 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63649193 63649322 63649193 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63649417 63649571 63649417 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63649684 63649804 63649684 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63649896 63650075 63649896 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63650160 63650228 63650160 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63650341 63650508 63650341 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63654109 63654129 63654109 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
chr7_3 CDS 63654478 63654696 63654478 ID=Msa1116100-mRNA-1:cds;Parent=Msa1116100-mRNA-1
Gene Sequence

>Msa1116100

ATGGCAACGAGTCGTGATGGTAACAGCGAGGGAACCTCAACGAGTCGCGACGATAACAACGAGAAGGACCTGCATATTTATGGCTCTGGTGAAAATAGTTGTTCTCAGCAACTTCCACCCGGCTCAACCACGCCCTTCCCACCATCACCTCTACGTTGCAAAATTGAATGTATGCCGCTGGTGTCACCTTCAGGCATTTTGAGAACTTTAGAAATCTATCAATTTGCCAAAAAAATCATTGATTTGAGTAGTTCATCATCAGGTTTATTTCAATGGTGGTTGAATTTTCGTACTGGGATTTTGCAAACAGAAGTAATTTTTCGTTTTTCCTGTGAAGGTTTAGTGGCAAAATGTAATTGGTATGTTGTGGAAAGAGATGCCTTAAAAGAAAAAGAGGTGAATGGCAAGAAAAGCAAGCTCATTGACATAACATTGGAGGATCACGAGGGTAAGAGGATCCACTGTTCTTTGTGGGATCAATATGCTATTAGAATGGATGCTCACTGGACTGTTCACGACCCAAACTCTCCTGTCGTGGTGATTTTACATTTGGGAAAACTCAAAAAATACTATGGTGCTATGGGTGTCTCGAATGCCTTTTATGGCACCAAGCTGATCTTAGATGATAATTTTCCGGATGCTAAGGAGTATCGTAGCAAGATTGGTGGTGCTGCAATTGAGGTGGCTCAAGGTCTTAGTCAAGCATCTGGAACCTTAATGGTTACTTTATCTGACGATCAGCTTCAGTCAAAGATGATGACAATTGAAGAATTGATTGAGTCGTCTGAGCAATGCAATGTGATAGTTTTTGCTTCTATTTGTGGTATTGAGCCGGAGTACAATTGGTATTATGATGCATGTACCAAGTGTGCGGCCAGAATCAAAATTATTGCTGGAAGGATGTTCTGTGCTAGATGCAATCAGAGCAGGAATGCTGTTCCTAGATTCAAGTTGCATGTCCAGGTGATGGACAATACAGGATCAACAAGTTTTATCCTTTTTGACTGTAACGTCGGAAATTATGTGGGAAGGAGTGTTCAAGACATAATTGATGCTCAGGGGCAGGCCAGCAATTCTCTTGGTTACCCCAAAGAGCTGGGGCTGTTGGTTGGTAAACAGATGTTGTTTAAAGTTGAGATCACTGATTGGAATTTGGTACACAATTGGCAAAATTATGGTGTCAAGAGGACTTCAGATGATGCTGATCTGATCAAAAGGTTTATTGAGAAACATAACATTAAGGTGATTGCTGAAGAGGATGATTCTTGCAATAACAATGTTCCGCTAACACATATTGGTGAAACGCAATTGGAGTTTGGTGATTCAACCAAAACTGGGAATGATCTGGTGGATAACGAGCAAACACCTGGTAGCAAATCTGGAGGGAAAAGGTCTGCTGATGCAGAGGATTCTGCTATACTTGGCACCGAAGAGATTGGAGAAAGATCAATTAACAAGCCGCAGAAGATGATATGTGTCAAGAAGGAAGAAGGATCTGGAAAGTCTCATACCCAATATGATGAAATGCTAATGAAACGATTTTTCAAAGATTCACGTGTTATAATTGTTGAAGTTGTTTTGGTTCGATCCTTCAATGGCAAAGTTGAGTTTCTTCTTCGTTGTTCTGGTTTGGTACTTCCACCAGTAAGAGAAGAACCACCTCTCATTTGCGGCGTCTCCTTCACTTATCGTTTTATCCGATTACGTCGAGCTTGGCGATGA

Protein sequence

>Msa1116100

MATSRDGNSEGTSTSRDDNNEKDLHIYGSGENSCSQQLPPGSTTPFPPSPLRCKIECMPLVSPSGILRTLEIYQFAKKIIDLSSSSSGLFQWWLNFRTGILQTEVIFRFSCEGLVAKCNWYVVERDALKEKEVNGKKSKLIDITLEDHEGKRIHCSLWDQYAIRMDAHWTVHDPNSPVVVILHLGKLKKYYGAMGVSNAFYGTKLILDDNFPDAKEYRSKIGGAAIEVAQGLSQASGTLMVTLSDDQLQSKMMTIEELIESSEQCNVIVFASICGIEPEYNWYYDACTKCAARIKIIAGRMFCARCNQSRNAVPRFKLHVQVMDNTGSTSFILFDCNVGNYVGRSVQDIIDAQGQASNSLGYPKELGLLVGKQMLFKVEITDWNLVHNWQNYGVKRTSDDADLIKRFIEKHNIKVIAEEDDSCNNNVPLTHIGETQLEFGDSTKTGNDLVDNEQTPGSKSGGKRSADAEDSAILGTEEIGERSINKPQKMICVKKEEGSGKSHTQYDEMLMKRFFKDSRVIIVEVVLVRSFNGKVEFLLRCSGLVLPPVREEPPLICGVSFTYRFIRLRRAWR*