Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118400 | XP_003624709.1 | 96.591 | 616 | 20 | 1 | 2 | 616 | 3 | 618 | 0.0 | 1195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118400 | sp|Q9ASS7|CAAT2_ARATH | 67.520 | 625 | 193 | 4 | 2 | 616 | 11 | 635 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118400 | G7L1J3 | 96.591 | 616 | 20 | 1 | 2 | 616 | 3 | 618 | 0.0 | 1195 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1032130 | Msa1118400 | 0.897125 | 1.903522e-76 | -8.615850e-47 |
| Msa1072060 | Msa1118400 | 0.846834 | 1.693470e-59 | -8.615850e-47 |
| Msa1118400 | Msa1159090 | 0.934714 | 2.633443e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118400 | MtrunA17_Chr7g0254061 | 96.591 | 616 | 20 | 1 | 2 | 616 | 3 | 618 | 0.0 | 1195 |
| Msa1118400 | MtrunA17_Chr6g0460901 | 70.096 | 622 | 172 | 4 | 2 | 616 | 15 | 629 | 0.0 | 873 |
| Msa1118400 | MtrunA17_Chr6g0460911 | 70.772 | 609 | 165 | 3 | 2 | 606 | 17 | 616 | 0.0 | 873 |
| Msa1118400 | MtrunA17_Chr6g0460881 | 69.608 | 612 | 176 | 4 | 2 | 603 | 9 | 620 | 0.0 | 862 |
| Msa1118400 | MtrunA17_Chr6g0460891 | 69.950 | 599 | 174 | 4 | 9 | 603 | 16 | 612 | 0.0 | 848 |
| Msa1118400 | MtrunA17_Chr7g0254011 | 61.789 | 615 | 221 | 3 | 15 | 616 | 23 | 636 | 0.0 | 770 |
| Msa1118400 | MtrunA17_Chr1g0160231 | 36.573 | 391 | 235 | 3 | 24 | 411 | 61 | 441 | 4.48e-74 | 248 |
| Msa1118400 | MtrunA17_Chr7g0215781 | 36.557 | 424 | 245 | 7 | 11 | 419 | 22 | 436 | 9.21e-71 | 239 |
| Msa1118400 | MtrunA17_Chr8g0381021 | 36.031 | 383 | 236 | 3 | 30 | 411 | 72 | 446 | 2.00e-70 | 239 |
| Msa1118400 | MtrunA17_Chr1g0210461 | 34.975 | 406 | 251 | 4 | 13 | 412 | 36 | 434 | 1.27e-68 | 233 |
| Msa1118400 | MtrunA17_Chr8g0381031 | 35.770 | 383 | 237 | 3 | 30 | 411 | 73 | 447 | 9.19e-67 | 229 |
| Msa1118400 | MtrunA17_Chr8g0381051 | 33.663 | 404 | 258 | 3 | 11 | 411 | 55 | 451 | 8.25e-66 | 226 |
| Msa1118400 | MtrunA17_Chr2g0296921 | 31.884 | 414 | 261 | 4 | 9 | 411 | 43 | 446 | 8.80e-66 | 226 |
| Msa1118400 | MtrunA17_Chr4g0055481 | 34.975 | 406 | 261 | 1 | 13 | 418 | 26 | 428 | 2.12e-58 | 205 |
| Msa1118400 | MtrunA17_Chr8g0358951 | 31.458 | 391 | 254 | 5 | 23 | 411 | 75 | 453 | 6.96e-56 | 199 |
| Msa1118400 | MtrunA17_Chr6g0463361 | 32.673 | 101 | 68 | 0 | 311 | 411 | 1 | 101 | 9.31e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118400 | AT1G58030.1 | 67.520 | 625 | 193 | 4 | 2 | 616 | 11 | 635 | 0.0 | 853 |
| Msa1118400 | AT5G36940.1 | 66.010 | 609 | 186 | 5 | 8 | 606 | 2 | 599 | 0.0 | 798 |
| Msa1118400 | AT3G03720.1 | 61.833 | 600 | 211 | 5 | 15 | 607 | 6 | 594 | 0.0 | 755 |
| Msa1118400 | AT1G05940.4 | 39.216 | 408 | 229 | 7 | 15 | 410 | 27 | 427 | 4.39e-75 | 248 |
| Msa1118400 | AT1G05940.3 | 39.216 | 408 | 229 | 7 | 15 | 410 | 27 | 427 | 1.32e-74 | 248 |
| Msa1118400 | AT1G05940.1 | 39.216 | 408 | 229 | 7 | 15 | 410 | 27 | 427 | 2.65e-74 | 248 |
| Msa1118400 | AT4G21120.1 | 35.961 | 406 | 246 | 6 | 11 | 411 | 48 | 444 | 5.82e-74 | 248 |
| Msa1118400 | AT5G04770.1 | 36.896 | 393 | 241 | 4 | 30 | 416 | 57 | 448 | 6.90e-71 | 239 |
| Msa1118400 | AT3G10600.1 | 37.127 | 369 | 219 | 4 | 52 | 412 | 78 | 441 | 1.67e-70 | 239 |
| Msa1118400 | AT2G34960.1 | 32.071 | 396 | 261 | 3 | 23 | 418 | 57 | 444 | 9.09e-67 | 228 |
| Msa1118400 | AT5G04770.2 | 36.735 | 343 | 212 | 3 | 30 | 368 | 57 | 398 | 4.53e-62 | 211 |
| Msa1118400 | AT1G17120.1 | 28.928 | 401 | 278 | 4 | 18 | 418 | 69 | 462 | 1.00e-56 | 201 |
| Msa1118400 | AT1G05940.2 | 37.261 | 314 | 186 | 4 | 102 | 410 | 2 | 309 | 1.06e-51 | 184 |
| Msa1118400 | AT3G10600.2 | 35.000 | 300 | 182 | 4 | 121 | 412 | 1 | 295 | 4.88e-50 | 180 |
| Msa1118400 | AT4G21120.2 | 36.949 | 295 | 175 | 5 | 119 | 411 | 9 | 294 | 1.21e-49 | 179 |
| Msa1118400 | AT5G04770.3 | 34.437 | 302 | 191 | 4 | 121 | 416 | 1 | 301 | 2.02e-45 | 167 |
Find 168 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGCACTGGGACTTTATT+TGG | 0.167755 | 7_3:+67008165 | None:intergenic |
| GGAGGCACTCTACTTGTTTC+TGG | 0.168457 | 7_3:-67007465 | Msa1118400:CDS |
| GGACCCATGTGCAGCAATTT+TGG | 0.245225 | 7_3:-67010233 | Msa1118400:CDS |
| AGTTTAAGCAACATGGCTTC+TGG | 0.254673 | 7_3:+67005998 | None:intergenic |
| AGAAGAATGTCATTATTAAA+TGG | 0.256203 | 7_3:-67005845 | Msa1118400:three_prime_UTR |
| GTCGGAAAATGCAGAGGATA+TGG | 0.257144 | 7_3:+67009199 | None:intergenic |
| CTTTCGTCAACTTGACTTAC+TGG | 0.257532 | 7_3:+67006032 | None:intergenic |
| TCCTACCTACTTATTAATCT+TGG | 0.265345 | 7_3:-67006825 | Msa1118400:CDS |
| TTGGCACGCCAGCATATTCC+TGG | 0.292633 | 7_3:-67010271 | Msa1118400:CDS |
| AGCTCTCTGCTCAGCGTTGA+TGG | 0.294768 | 7_3:-67009044 | Msa1118400:CDS |
| GTTACAGGACTCTTATGTTT+GGG | 0.299102 | 7_3:-67010202 | Msa1118400:CDS |
| TTATAACTCACAGTTGTCTT+TGG | 0.305623 | 7_3:+67008008 | None:intergenic |
| GCTTGTAGATGCCCTTCTGC+TGG | 0.307862 | 7_3:-67012052 | Msa1118400:CDS |
| AGAGCATTCTGGACCATCTT+TGG | 0.314125 | 7_3:-67012137 | Msa1118400:CDS |
| TATTTGGAGGAATATATCTT+AGG | 0.315952 | 7_3:+67008181 | None:intergenic |
| TCAGGATCAATTGCATAATA+AGG | 0.320193 | 7_3:+67009227 | None:intergenic |
| GGAGTTGACGGGATGCTTGC+TGG | 0.321468 | 7_3:-67009755 | Msa1118400:CDS |
| CTCTAGAAGAAAACAAATAT+AGG | 0.331820 | 7_3:+67005866 | None:intergenic |
| GAACCCTCTTTATTTATTGA+TGG | 0.332761 | 7_3:+67013034 | None:intergenic |
| ATGGAAGTCTCTGATCTTGC+AGG | 0.341448 | 7_3:-67008406 | Msa1118400:CDS |
| TTGTGGGTAGGTTCAGAATA+AGG | 0.355942 | 7_3:+67013005 | None:intergenic |
| CTAGGTGTTGGTTCAACAAT+TGG | 0.358972 | 7_3:-67012196 | Msa1118400:intron |
| GTCAAGGGCACAATAATTAC+TGG | 0.364044 | 7_3:-67008457 | Msa1118400:CDS |
| TGTTACAGGACTCTTATGTT+TGG | 0.366301 | 7_3:-67010203 | Msa1118400:CDS |
| GATTGTTGCTGGTGGTTACA+TGG | 0.372740 | 7_3:-67009917 | Msa1118400:CDS |
| TGGTGGAGTTGTTATGAATA+AGG | 0.375024 | 7_3:+67013054 | None:intergenic |
| GATCGGCTGGGCCTTGGTAC+TGG | 0.376671 | 7_3:-67011444 | Msa1118400:CDS |
| TCTAGAAGAAAACAAATATA+GGG | 0.378571 | 7_3:+67005867 | None:intergenic |
| CTTCATGTTTAACTTTCCTT+AGG | 0.381227 | 7_3:-67007657 | Msa1118400:intron |
| CCTACCTACTTATTAATCTT+GGG | 0.382609 | 7_3:-67006824 | Msa1118400:intron |
| CTGGTCTCTGTTGTTGTGGT+TGG | 0.388475 | 7_3:-67009257 | Msa1118400:CDS |
| CGCTTTGCATTGTGTGGAGT+TGG | 0.393647 | 7_3:-67007486 | Msa1118400:CDS |
| GTTTCTCATCTCATTGCAAT+TGG | 0.397730 | 7_3:-67012737 | Msa1118400:intron |
| GTGTTTCACAAAAGGGTTCA+TGG | 0.399956 | 7_3:-67012835 | Msa1118400:CDS |
| CTGATTGCTGGATTAGCAGC+TGG | 0.407148 | 7_3:-67012103 | Msa1118400:CDS |
| AGAAAATGCTTTCCAAGCTT+AGG | 0.407371 | 7_3:-67005891 | Msa1118400:three_prime_UTR |
| AATGAAGTGGGAAATTTAAT+CGG | 0.409640 | 7_3:+67012966 | None:intergenic |
| GTTTAAGCAACATGGCTTCT+GGG | 0.417705 | 7_3:+67005999 | None:intergenic |
| GTAGAATTAGTTTGAAATTG+TGG | 0.418934 | 7_3:+67012988 | None:intergenic |
| GCTTCACTGTTTCTGTGTTG+TGG | 0.419278 | 7_3:-67009290 | Msa1118400:CDS |
| GAACGGTGTTTAGAAATAAG+AGG | 0.419579 | 7_3:+67008030 | None:intergenic |
| GATGGGTGGTGTTTCACAAA+AGG | 0.422636 | 7_3:-67012843 | Msa1118400:CDS |
| TCCTGGAGAGAAGGAGGCAC+TGG | 0.423452 | 7_3:+67008153 | None:intergenic |
| GTGTTGCTTGGTTGATCGGC+TGG | 0.424415 | 7_3:-67011457 | Msa1118400:CDS |
| TAGAATTAGTTTGAAATTGT+GGG | 0.424887 | 7_3:+67012989 | None:intergenic |
| GTAATTATTGTGCCCTTGAC+AGG | 0.427628 | 7_3:+67008460 | None:intergenic |
| GTTTCTGTATGGTTGGCAAC+AGG | 0.429237 | 7_3:-67006116 | Msa1118400:CDS |
| GAAAATGCTTTCCAAGCTTA+GGG | 0.432459 | 7_3:-67005890 | Msa1118400:three_prime_UTR |
| CCCAGTGCCTCCTTCTCTCC+AGG | 0.433918 | 7_3:-67008154 | Msa1118400:CDS |
| AAAGGACACCATACAAGATT+AGG | 0.433962 | 7_3:+67011380 | None:intergenic |
| CTAAATAGAAGAAGAGTTGT+TGG | 0.434209 | 7_3:-67007730 | Msa1118400:CDS |
| TTGGTTGATCGGCTGGGCCT+TGG | 0.435270 | 7_3:-67011450 | Msa1118400:CDS |
| CCATAGCGATCATATGCTTA+GGG | 0.435534 | 7_3:-67007702 | Msa1118400:CDS |
| TGCATCATCTTGATCCATAC+AGG | 0.437181 | 7_3:+67007428 | None:intergenic |
| TTCAGTGTTGCTTGGTTGAT+CGG | 0.437536 | 7_3:-67011461 | Msa1118400:intron |
| CCCTCTTTATTTATTGATGG+TGG | 0.440441 | 7_3:+67013037 | None:intergenic |
| CAAATATAGGGCCCTAAGCT+TGG | 0.440621 | 7_3:+67005879 | None:intergenic |
| ACTCTTATGTTTGGGGATCA+AGG | 0.440693 | 7_3:-67010194 | Msa1118400:CDS |
| TTATACCTCTTCAGCAGTGC+TGG | 0.444181 | 7_3:+67009688 | None:intergenic |
| ACAGTAGCTAGAGAGCATTC+TGG | 0.453302 | 7_3:-67012148 | Msa1118400:CDS |
| CACTATTCATACATATGTCT+TGG | 0.455035 | 7_3:-67012019 | Msa1118400:CDS |
| GCCATTGCCATCAAAATTCG+TGG | 0.458247 | 7_3:+67008538 | None:intergenic |
| TGGTGCTGGAGTGTATGTTT+TGG | 0.459837 | 7_3:-67012176 | Msa1118400:CDS |
| CATGGTTGCGTGTTTCTGTA+TGG | 0.462201 | 7_3:-67006127 | Msa1118400:CDS |
| CATCTTGATCCATACAGGTT+AGG | 0.463705 | 7_3:+67007433 | None:intergenic |
| GGCAGCTACATTATAAATGC+TGG | 0.464167 | 7_3:-67009076 | Msa1118400:intron |
| TCGGAAAATGCAGAGGATAT+GGG | 0.465269 | 7_3:+67009200 | None:intergenic |
| GCGGGATATGAACTTCCTAC+TGG | 0.469114 | 7_3:-67009877 | Msa1118400:CDS |
| CTTGTAGATGCCCTTCTGCT+GGG | 0.472594 | 7_3:-67012051 | Msa1118400:CDS |
| ACAGGAAGCAGTGGAACAAA+TGG | 0.473365 | 7_3:+67006867 | None:intergenic |
| ATTCGTCTTCCTAACCTGTA+TGG | 0.483625 | 7_3:-67007442 | Msa1118400:CDS |
| CTCTGCTCAGCGTTGATGGG+TGG | 0.484464 | 7_3:-67009040 | Msa1118400:CDS |
| ATGGGTGGTGTTTCACAAAA+GGG | 0.485990 | 7_3:-67012842 | Msa1118400:CDS |
| CTTACCCAAGATTAATAAGT+AGG | 0.486970 | 7_3:+67006820 | None:intergenic |
| TGATTTCTACAATTGAATCC+TGG | 0.490418 | 7_3:+67008136 | None:intergenic |
| CGAGATTTGCCACTAGGCAT+TGG | 0.490521 | 7_3:-67009314 | Msa1118400:CDS |
| TTCCGACCATGGGATGCAAT+GGG | 0.491894 | 7_3:-67009183 | Msa1118400:CDS |
| CGGAAAATGCAGAGGATATG+GGG | 0.492152 | 7_3:+67009201 | None:intergenic |
| GCTCTCTGCTCAGCGTTGAT+GGG | 0.495567 | 7_3:-67009043 | Msa1118400:CDS |
| ACCATAGCGATCATATGCTT+AGG | 0.496774 | 7_3:-67007703 | Msa1118400:CDS |
| CAATCTCGCGTAACATCTAA+AGG | 0.500840 | 7_3:+67008066 | None:intergenic |
| GGATTCAAGTCTGGATGGGC+GGG | 0.501989 | 7_3:-67009895 | Msa1118400:CDS |
| TGTTGCTTGGTTGATCGGCT+GGG | 0.504889 | 7_3:-67011456 | Msa1118400:CDS |
| GAATATGAAGAGGAAAATAT+CGG | 0.505903 | 7_3:-67008108 | Msa1118400:CDS |
| GGTTACATGGGATTCAAGTC+TGG | 0.507654 | 7_3:-67009904 | Msa1118400:CDS |
| TCCACCATCAATAAATAAAG+AGG | 0.509282 | 7_3:-67013038 | Msa1118400:five_prime_UTR |
| TAAATAGAAGAAGAGTTGTT+GGG | 0.509609 | 7_3:-67007729 | Msa1118400:CDS |
| GTTGGTTCAACAATTGGTGC+TGG | 0.513215 | 7_3:-67012190 | Msa1118400:CDS |
| AGAAATAAGAGGGTAATCAA+TGG | 0.513407 | 7_3:+67008041 | None:intergenic |
| TTTCCGACCATGGGATGCAA+TGG | 0.515484 | 7_3:-67009184 | Msa1118400:CDS |
| GATGATGCAAGGCACAACTT+TGG | 0.517587 | 7_3:-67007414 | Msa1118400:CDS |
| TTGATGAGAATGCAAGCTAC+AGG | 0.518109 | 7_3:+67006849 | None:intergenic |
| TTACAGGACTCTTATGTTTG+GGG | 0.522945 | 7_3:-67010201 | Msa1118400:CDS |
| CATACATATGTCTTGGAGAA+GGG | 0.524958 | 7_3:-67012012 | Msa1118400:intron |
| TCTGCTCAGCGTTGATGGGT+GGG | 0.531375 | 7_3:-67009039 | Msa1118400:CDS |
| CCTGGAGAGAAGGAGGCACT+GGG | 0.531508 | 7_3:+67008154 | None:intergenic |
| AGCATCCCGTCAACTCCAAA+GGG | 0.533518 | 7_3:+67009761 | None:intergenic |
| AACGGTGTTTAGAAATAAGA+GGG | 0.534923 | 7_3:+67008031 | None:intergenic |
| AGAAAAGAAATAGCCAAAGA+TGG | 0.535093 | 7_3:+67012124 | None:intergenic |
| GGCACTGGGACTTTATTTGG+AGG | 0.535944 | 7_3:+67008168 | None:intergenic |
| AGTTGCCAGCACTGCTGAAG+AGG | 0.536481 | 7_3:-67009693 | Msa1118400:intron |
| TGGCACGCCAGCATATTCCT+GGG | 0.540143 | 7_3:-67010270 | Msa1118400:CDS |
| GGGATTCAAGTCTGGATGGG+CGG | 0.541106 | 7_3:-67009896 | Msa1118400:CDS |
| TATGCTGGTCTCTGTTGTTG+TGG | 0.542503 | 7_3:-67009261 | Msa1118400:CDS |
| AATACCAAAATTGCTGCACA+TGG | 0.543302 | 7_3:+67010229 | None:intergenic |
| CCTCAACGAGATTTGCCACT+AGG | 0.543791 | 7_3:-67009320 | Msa1118400:CDS |
| ACATGGGATTCAAGTCTGGA+TGG | 0.543971 | 7_3:-67009900 | Msa1118400:CDS |
| GTTGCGTGTTTCTGTATGGT+TGG | 0.549450 | 7_3:-67006123 | Msa1118400:CDS |
| TTTGCATTGTGTGGAGTTGG+AGG | 0.551093 | 7_3:-67007483 | Msa1118400:CDS |
| AAGCATCCCGTCAACTCCAA+AGG | 0.552340 | 7_3:+67009760 | None:intergenic |
| CGGGATATGAACTTCCTACT+GGG | 0.552815 | 7_3:-67009876 | Msa1118400:intron |
| TTTCTACTGCAGGTCAGTGT+GGG | 0.553632 | 7_3:-67008246 | Msa1118400:intron |
| AGTCTCTGATCTTGCAGGGA+TGG | 0.553646 | 7_3:-67008401 | Msa1118400:intron |
| TGATATGCACTCCCAGCAGA+AGG | 0.558377 | 7_3:+67012040 | None:intergenic |
| AGGCACAACTTTGGTCACTC+TGG | 0.558581 | 7_3:-67007405 | Msa1118400:CDS |
| ATTGTTGCTGGTGGTTACAT+GGG | 0.563511 | 7_3:-67009916 | Msa1118400:CDS |
| GGTGGCGCTGCTGTTGCTCG+TGG | 0.566332 | 7_3:-67011410 | Msa1118400:CDS |
| ACAATTGAATCCTGGAGAGA+AGG | 0.568236 | 7_3:+67008144 | None:intergenic |
| CAAATTGTAAATAATTAATG+AGG | 0.568676 | 7_3:+67005803 | None:intergenic |
| TCTGTTCGCTTTGCATTGTG+TGG | 0.569512 | 7_3:-67007492 | Msa1118400:CDS |
| AGGTGACAGTACTTGTGTAC+TGG | 0.573426 | 7_3:-67005754 | Msa1118400:three_prime_UTR |
| TATCAATCCCAGGAATATGC+TGG | 0.574107 | 7_3:+67010263 | None:intergenic |
| CCCTAAGCATATGATCGCTA+TGG | 0.574884 | 7_3:+67007702 | None:intergenic |
| GACAGTACTTGTGTACTGGT+TGG | 0.576109 | 7_3:-67005750 | Msa1118400:three_prime_UTR |
| TCATACATATGTCTTGGAGA+AGG | 0.576894 | 7_3:-67012013 | Msa1118400:CDS |
| TCCTGGGATTGATATTGTCG+TGG | 0.576948 | 7_3:-67010254 | Msa1118400:CDS |
| ATTAGTTTGAAATTGTGGGT+AGG | 0.577913 | 7_3:+67012993 | None:intergenic |
| AATCAAAGTCGAATATGAAG+AGG | 0.578096 | 7_3:-67008118 | Msa1118400:CDS |
| ATGCAGAGCACAGTGGTACA+AGG | 0.579065 | 7_3:-67009979 | Msa1118400:intron |
| GTGTTGTGGAATGTATATGC+TGG | 0.580843 | 7_3:-67009276 | Msa1118400:CDS |
| TTTCTTTCAGAGCGGAAACA+TGG | 0.581146 | 7_3:-67006145 | Msa1118400:intron |
| ATGCTAAGACTGCAGCAGCT+AGG | 0.582418 | 7_3:+67008434 | None:intergenic |
| TCTATAGAGTTTAAGCAACA+TGG | 0.584174 | 7_3:+67005991 | None:intergenic |
| TCCACGACAATATCAATCCC+AGG | 0.587193 | 7_3:+67010253 | None:intergenic |
| CATGGGATTCAAGTCTGGAT+GGG | 0.589744 | 7_3:-67009899 | Msa1118400:CDS |
| GGCCCATTGCATCCCATGGT+CGG | 0.589864 | 7_3:+67009181 | None:intergenic |
| TTGATGGCAATGGCAAGGGA+TGG | 0.592065 | 7_3:-67008529 | Msa1118400:CDS |
| TTGGTACTGGAATATACGAT+TGG | 0.592891 | 7_3:-67011431 | Msa1118400:CDS |
| GTACTGGAATATACGATTGG+TGG | 0.594336 | 7_3:-67011428 | Msa1118400:CDS |
| CCCAAGATTAATAAGTAGGT+AGG | 0.595085 | 7_3:+67006824 | None:intergenic |
| ACGCGGCCCATTGCATCCCA+TGG | 0.599431 | 7_3:+67009177 | None:intergenic |
| TGGAAGTCTCTGATCTTGCA+GGG | 0.601560 | 7_3:-67008405 | Msa1118400:CDS |
| CACACTCTAGTTCCTGTCAA+GGG | 0.608609 | 7_3:-67008472 | Msa1118400:CDS |
| AAAAGATTAAAGTACCCAGT+AGG | 0.617437 | 7_3:+67009862 | None:intergenic |
| ATTGAATCCTGGAGAGAAGG+AGG | 0.617882 | 7_3:+67008147 | None:intergenic |
| GATATGCACTCCCAGCAGAA+GGG | 0.619038 | 7_3:+67012041 | None:intergenic |
| GCACACTCTAGTTCCTGTCA+AGG | 0.620545 | 7_3:-67008473 | Msa1118400:CDS |
| CCACCATCAATAAATAAAGA+GGG | 0.621367 | 7_3:-67013037 | Msa1118400:five_prime_UTR |
| ATGCAAGCTACAGGAAGCAG+TGG | 0.621379 | 7_3:+67006858 | None:intergenic |
| GATAACGCTTTAGCAAGAAG+AGG | 0.622934 | 7_3:+67012761 | None:intergenic |
| ACTCACAGTTGTCTTTGGAA+CGG | 0.623297 | 7_3:+67008013 | None:intergenic |
| CTATAGAACTTAGTGCGTAG+AGG | 0.624378 | 7_3:-67005975 | Msa1118400:three_prime_UTR |
| CACAACTTTGGTCACTCTGG+AGG | 0.630302 | 7_3:-67007402 | Msa1118400:intron |
| TGGGTAGGTTCAGAATAAGG+AGG | 0.634010 | 7_3:+67013008 | None:intergenic |
| GTATGGATCAAGATGATGCA+AGG | 0.639702 | 7_3:-67007425 | Msa1118400:CDS |
| CAGCACAGATATTGCCACCA+TGG | 0.640973 | 7_3:+67008206 | None:intergenic |
| AACATGAAGCTGCATATGTG+AGG | 0.644006 | 7_3:+67007671 | None:intergenic |
| ATAGAAGAAGAGTTGTTGGG+TGG | 0.647520 | 7_3:-67007726 | Msa1118400:CDS |
| CATAGCGATCATATGCTTAG+GGG | 0.658596 | 7_3:-67007701 | Msa1118400:CDS |
| CCCATGGTCGGAAAATGCAG+AGG | 0.669413 | 7_3:+67009193 | None:intergenic |
| CCTAGTGGCAAATCTCGTTG+AGG | 0.673365 | 7_3:+67009320 | None:intergenic |
| GGAAAATGCAGAGGATATGG+GGG | 0.673757 | 7_3:+67009202 | None:intergenic |
| ATACCAAAATTGCTGCACAT+GGG | 0.679743 | 7_3:+67010230 | None:intergenic |
| TAAGCAACATGGCTTCTGGG+AGG | 0.687199 | 7_3:+67006002 | None:intergenic |
| AATCGTATATTCCAGTACCA+AGG | 0.694535 | 7_3:+67011433 | None:intergenic |
| AGTGAAGCACCAATGCCTAG+TGG | 0.698160 | 7_3:+67009305 | None:intergenic |
| CTTATGTTTGGGGATCAAGG+AGG | 0.713389 | 7_3:-67010191 | Msa1118400:intron |
| TACATACATGCAGAGCACAG+TGG | 0.778446 | 7_3:-67009986 | Msa1118400:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATAAAAAAATCAAAA+GGG | + | chr7_3:67006157-67006176 | None:intergenic | 10.0% |
| !!! | TTTTGAATAAAAAAATCAAA+AGG | + | chr7_3:67006158-67006177 | None:intergenic | 10.0% |
| !!! | ATTAGTTTTATTGTATTTTT+TGG | - | chr7_3:67006848-67006867 | Msa1118400:CDS | 10.0% |
| !! | AAATCAAGTATAAAAAAAAA+AGG | - | chr7_3:67007558-67007577 | Msa1118400:intron | 10.0% |
| !! | AATCAAGTATAAAAAAAAAA+GGG | - | chr7_3:67007559-67007578 | Msa1118400:intron | 10.0% |
| !! | ATTATAATAAGTATTAAGTT+TGG | + | chr7_3:67010906-67010925 | None:intergenic | 10.0% |
| !! | TCATAAAGAAAAAATAAGAT+AGG | + | chr7_3:67007208-67007227 | None:intergenic | 15.0% |
| !!! | TATCTTATTTTTTCTTTATG+AGG | - | chr7_3:67007207-67007226 | Msa1118400:intron | 15.0% |
| !!! | ATCTTATTTTTTCTTTATGA+GGG | - | chr7_3:67007208-67007227 | Msa1118400:intron | 15.0% |
| !! | AAGAATTAAAAAGTTAAAGT+TGG | + | chr7_3:67007440-67007459 | None:intergenic | 15.0% |
| !! | ATCAAGTATAAAAAAAAAAG+GGG | - | chr7_3:67007560-67007579 | Msa1118400:intron | 15.0% |
| !! | TCATTAAATAATCAATGTAT+CGG | + | chr7_3:67007711-67007730 | None:intergenic | 15.0% |
| !! | TTTCATGTTTATTTCAATTT+GGG | - | chr7_3:67007998-67008017 | Msa1118400:intron | 15.0% |
| !!! | AAAGTAGTCTTATTATTAAT+TGG | - | chr7_3:67008031-67008050 | Msa1118400:CDS | 15.0% |
| !!! | GGTTTATTTAATTTATAACT+TGG | - | chr7_3:67008052-67008071 | Msa1118400:CDS | 15.0% |
| !!! | TAGTATACTAGTATTTATTT+TGG | - | chr7_3:67008143-67008162 | Msa1118400:CDS | 15.0% |
| !! | CTTACTAAATTATCATTATT+AGG | - | chr7_3:67009897-67009916 | Msa1118400:CDS | 15.0% |
| !! | TAGGAATAAATATAAAATCT+TGG | - | chr7_3:67009916-67009935 | Msa1118400:CDS | 15.0% |
| !! | ATAGAAATGCAATTTATATT+TGG | + | chr7_3:67010065-67010084 | None:intergenic | 15.0% |
| !! | TTATTTATGTCACAAAAAAA+TGG | + | chr7_3:67010246-67010265 | None:intergenic | 15.0% |
| !! | TAGAAAATCAAAATACATAT+CGG | + | chr7_3:67010479-67010498 | None:intergenic | 15.0% |
| !! | TTAATACTTATTATAATCTC+TGG | - | chr7_3:67010909-67010928 | Msa1118400:intron | 15.0% |
| !!! | ATTAAGTTGTTTATCTAATT+AGG | - | chr7_3:67011667-67011686 | Msa1118400:intron | 15.0% |
| !! | CAGAAATTAAAAGATTATTT+AGG | + | chr7_3:67012016-67012035 | None:intergenic | 15.0% |
| !!! | TGAAAACTATTTTATTTTGA+GGG | + | chr7_3:67012154-67012173 | None:intergenic | 15.0% |
| !!! | ATGAAAACTATTTTATTTTG+AGG | + | chr7_3:67012155-67012174 | None:intergenic | 15.0% |
| !!! | TTCAATTACAGTTTATTTTT+GGG | + | chr7_3:67012445-67012464 | None:intergenic | 15.0% |
| !! | CAAATTGTAAATAATTAATG+AGG | + | chr7_3:67012939-67012958 | None:intergenic | 15.0% |
| !!! | TAGAATTAGTTTGAAATTGT+GGG | + | chr7_3:67005753-67005772 | None:intergenic | 20.0% |
| !!! | TTTTATCCTTTTTTTTCATC+TGG | - | chr7_3:67006061-67006080 | Msa1118400:CDS | 20.0% |
| !!! | TTTATCCTTTTTTTTCATCT+GGG | - | chr7_3:67006062-67006081 | Msa1118400:CDS | 20.0% |
| !!! | TTTTATGATGATAACTTACT+AGG | - | chr7_3:67006525-67006544 | Msa1118400:intron | 20.0% |
| !! | TCAAGTATAAAAAAAAAAGG+GGG | - | chr7_3:67007561-67007580 | Msa1118400:intron | 20.0% |
| !!! | TTTTTGCTTATAATTGTGAT+CGG | + | chr7_3:67007640-67007659 | None:intergenic | 20.0% |
| !! | CATTAAATAATCAATGTATC+GGG | + | chr7_3:67007710-67007729 | None:intergenic | 20.0% |
| !!! | TCTTTATTTATAAATGTGAC+AGG | - | chr7_3:67007745-67007764 | Msa1118400:intron | 20.0% |
| !!! | TTCAATGTTTTCAAAATATG+AGG | + | chr7_3:67007803-67007822 | None:intergenic | 20.0% |
| !! | CTTTCATGTTTATTTCAATT+TGG | - | chr7_3:67007997-67008016 | Msa1118400:intron | 20.0% |
| !! | TTCATGTTTATTTCAATTTG+GGG | - | chr7_3:67007999-67008018 | Msa1118400:intron | 20.0% |
| !! | ATAGATATGTTTCTTTGTAT+AGG | - | chr7_3:67008407-67008426 | Msa1118400:CDS | 20.0% |
| !!! | ATTAATAGATATTTTCCCTT+TGG | - | chr7_3:67008963-67008982 | Msa1118400:intron | 20.0% |
| !! | TTCGATTATATATCAATAGT+AGG | + | chr7_3:67009341-67009360 | None:intergenic | 20.0% |
| !! | TACTATTGATATATAATCGA+AGG | - | chr7_3:67009340-67009359 | Msa1118400:intron | 20.0% |
| !!! | TTTGTAACTTCATAAAGTTT+TGG | - | chr7_3:67009595-67009614 | Msa1118400:intron | 20.0% |
| !!! | AATATAATCAGTTGATACTA+GGG | + | chr7_3:67009781-67009800 | None:intergenic | 20.0% |
| !!! | AAATATAATCAGTTGATACT+AGG | + | chr7_3:67009782-67009801 | None:intergenic | 20.0% |
| !! | TCTGTAATTTCTCTTATATT+AGG | - | chr7_3:67009807-67009826 | Msa1118400:intron | 20.0% |
| !! | AACTTTAATTCAAAACATGA+AGG | + | chr7_3:67009849-67009868 | None:intergenic | 20.0% |
| !! | GAATAAATATAAAATCTTGG+TGG | - | chr7_3:67009919-67009938 | Msa1118400:CDS | 20.0% |
| !! | AAATAAATTTACCAAACACA+AGG | + | chr7_3:67011381-67011400 | None:intergenic | 20.0% |
| !! | TTGTGTTTGGTAAATTTATT+TGG | - | chr7_3:67011380-67011399 | Msa1118400:intron | 20.0% |
| !! | AAATTTATTTGGATAGTGTT+AGG | - | chr7_3:67011391-67011410 | Msa1118400:intron | 20.0% |
| !! | AATTTATTTGGATAGTGTTA+GGG | - | chr7_3:67011392-67011411 | Msa1118400:intron | 20.0% |
| !! | TAAATGATAGAATTATGAAC+AGG | + | chr7_3:67011831-67011850 | None:intergenic | 20.0% |
| !!! | TCTTTTAATTTCTGTGATAT+AGG | - | chr7_3:67012022-67012041 | Msa1118400:CDS | 20.0% |
| !!! | GAAAACTATTTTATTTTGAG+GGG | + | chr7_3:67012153-67012172 | None:intergenic | 20.0% |
| !! | TATTATAAGGACAAAGTTAA+TGG | - | chr7_3:67012376-67012395 | Msa1118400:intron | 20.0% |
| !!! | GTTCAATTACAGTTTATTTT+TGG | + | chr7_3:67012446-67012465 | None:intergenic | 20.0% |
| !! | AAAATAAAAGAAGAAACACA+AGG | - | chr7_3:67012471-67012490 | Msa1118400:intron | 20.0% |
| !!! | CTACTAATTTATGTGTTTTA+TGG | - | chr7_3:67012647-67012666 | Msa1118400:intron | 20.0% |
| !! | TCTAGAAGAAAACAAATATA+GGG | + | chr7_3:67012875-67012894 | None:intergenic | 20.0% |
| !! | AGAAGAATGTCATTATTAAA+TGG | - | chr7_3:67012894-67012913 | Msa1118400:five_prime_UTR | 20.0% |
| !! | ATCATGTATAAAAAAGTAGT+AGG | - | chr7_3:67012965-67012984 | Msa1118400:five_prime_UTR | 20.0% |
| !! | GTAGAATTAGTTTGAAATTG+TGG | + | chr7_3:67005754-67005773 | None:intergenic | 25.0% |
| ! | AATGAAGTGGGAAATTTAAT+CGG | + | chr7_3:67005776-67005795 | None:intergenic | 25.0% |
| !!! | TTGTTGTTGTTTTTCTTTGA+TGG | - | chr7_3:67005878-67005897 | Msa1118400:three_prime_UTR | 25.0% |
| !!! | TGTTGTTGTTTTTCTTTGAT+GGG | - | chr7_3:67005879-67005898 | Msa1118400:three_prime_UTR | 25.0% |
| !!! | TTGAATTCTGTTTTGAAACA+TGG | - | chr7_3:67006090-67006109 | Msa1118400:CDS | 25.0% |
| ! | TCAAAAAGAGAAATGATGTT+TGG | - | chr7_3:67006172-67006191 | Msa1118400:intron | 25.0% |
| ! | GATATAGAGATAAACAGATA+CGG | - | chr7_3:67006283-67006302 | Msa1118400:intron | 25.0% |
| !!! | TACGAAAATGGTGTTTTTTT+TGG | - | chr7_3:67006352-67006371 | Msa1118400:intron | 25.0% |
| !! | GTTTATAGTTTACTGTGTTT+TGG | - | chr7_3:67006483-67006502 | Msa1118400:intron | 25.0% |
| !!! | AGGATGAAAAGTTCTAAAAA+GGG | + | chr7_3:67006766-67006785 | None:intergenic | 25.0% |
| !!! | AAGGATGAAAAGTTCTAAAA+AGG | + | chr7_3:67006767-67006786 | None:intergenic | 25.0% |
| ! | TCTAATGTGATCTTATTATC+AGG | - | chr7_3:67006909-67006928 | Msa1118400:intron | 25.0% |
| !!! | TTTCTAGTAAAACCAAGTTT+TGG | + | chr7_3:67006952-67006971 | None:intergenic | 25.0% |
| ! | TACTCAAACATGTTAAAACT+TGG | + | chr7_3:67007015-67007034 | None:intergenic | 25.0% |
| !!! | TTATTTTTTCTTTATGAGGG+TGG | - | chr7_3:67007211-67007230 | Msa1118400:intron | 25.0% |
| ! | TTATTTATAAATGTGACAGG+AGG | - | chr7_3:67007748-67007767 | Msa1118400:intron | 25.0% |
| ! | TTTATTTCAATTTGGGGATT+TGG | - | chr7_3:67008005-67008024 | Msa1118400:intron | 25.0% |
| ! | AGCAAATAAAGTGAATAGTT+TGG | - | chr7_3:67008292-67008311 | Msa1118400:intron | 25.0% |
| !!! | ATTTTGGTATTACTTGTTAC+AGG | - | chr7_3:67008522-67008541 | Msa1118400:CDS | 25.0% |
| ! | TGAATAATTGCTGAATGAAA+AGG | + | chr7_3:67008578-67008597 | None:intergenic | 25.0% |
| !!! | AGAGAAAATTTTAGTTCACA+CGG | + | chr7_3:67008629-67008648 | None:intergenic | 25.0% |
| !! | GAACTAAAATTTTCTCTTCT+TGG | - | chr7_3:67008632-67008651 | Msa1118400:intron | 25.0% |
| !! | TAAAATTTTCTCTTCTTGGT+TGG | - | chr7_3:67008636-67008655 | Msa1118400:intron | 25.0% |
| !!! | GACAAGTTTTAAGTAATAAG+AGG | + | chr7_3:67008935-67008954 | None:intergenic | 25.0% |
| !! | ATAATTTCATCAGCAGATTT+TGG | - | chr7_3:67009119-67009138 | Msa1118400:intron | 25.0% |
| !! | CTTGACTACAACTTTTTATT+GGG | - | chr7_3:67009167-67009186 | Msa1118400:intron | 25.0% |
| ! | TAATGTTTCACTTCATTGAT+AGG | - | chr7_3:67009388-67009407 | Msa1118400:intron | 25.0% |
| ! | TTACAAACTATAAACTTACG+CGG | + | chr7_3:67009582-67009601 | None:intergenic | 25.0% |
| ! | ACTAGGGAAGAATAAATAAT+TGG | + | chr7_3:67009765-67009784 | None:intergenic | 25.0% |
| ! | AATTTCTCTTATATTAGGTG+AGG | - | chr7_3:67009812-67009831 | Msa1118400:intron | 25.0% |
| ! | ATTTCTCTTATATTAGGTGA+GGG | - | chr7_3:67009813-67009832 | Msa1118400:intron | 25.0% |
| ! | ATAGTAAGACTCAATATATG+AGG | - | chr7_3:67009975-67009994 | Msa1118400:CDS | 25.0% |
| ! | ATAAATTGCATTTCTATTGC+TGG | - | chr7_3:67010068-67010087 | Msa1118400:intron | 25.0% |
| !!! | AGTTTTGTGATAAATGGAAA+AGG | + | chr7_3:67010107-67010126 | None:intergenic | 25.0% |
| ! | TTTATGTCACAAAAAAATGG+TGG | + | chr7_3:67010243-67010262 | None:intergenic | 25.0% |
| ! | CCATTATCAATTACATAAAG+TGG | + | chr7_3:67010369-67010388 | None:intergenic | 25.0% |
| ! | CCACTTTATGTAATTGATAA+TGG | - | chr7_3:67010366-67010385 | Msa1118400:intron | 25.0% |
| ! | AAATGAATAATAACCACTCA+AGG | - | chr7_3:67010422-67010441 | Msa1118400:intron | 25.0% |
| ! | TATTTGGAGGAATATATCTT+AGG | + | chr7_3:67010561-67010580 | None:intergenic | 25.0% |
| ! | GAATATGAAGAGGAAAATAT+CGG | - | chr7_3:67010631-67010650 | Msa1118400:intron | 25.0% |
| ! | TGTTTGATAGAGATTGATAA+AGG | + | chr7_3:67010767-67010786 | None:intergenic | 25.0% |
| ! | ATCCAAAACAACAAAACAAA+AGG | + | chr7_3:67010983-67011002 | None:intergenic | 25.0% |
| ! | TAAATAGAAGAAGAGTTGTT+GGG | - | chr7_3:67011010-67011029 | Msa1118400:intron | 25.0% |
| ! | TTAACTATTAGACTAACCTA+AGG | + | chr7_3:67011101-67011120 | None:intergenic | 25.0% |
| ! | TCACATGTTTAATATGCATA+TGG | - | chr7_3:67011958-67011977 | Msa1118400:intron | 25.0% |
| !!! | TTATTTAGGCATTGAATTTC+TGG | + | chr7_3:67012002-67012021 | None:intergenic | 25.0% |
| !! | ATGTGGAACTATATTCATTT+TGG | + | chr7_3:67012188-67012207 | None:intergenic | 25.0% |
| ! | ATACTTTGTCCTATTTATCA+GGG | - | chr7_3:67012268-67012287 | Msa1118400:intron | 25.0% |
| !!! | AAAGCATTTTCTTTTGTACA+AGG | + | chr7_3:67012840-67012859 | None:intergenic | 25.0% |
| !! | CTCTAGAAGAAAACAAATAT+AGG | + | chr7_3:67012876-67012895 | None:intergenic | 25.0% |
| TCCACCATCAATAAATAAAG+AGG | - | chr7_3:67005701-67005720 | Msa1118400:three_prime_UTR | 30.0% | |
| CCACCATCAATAAATAAAGA+GGG | - | chr7_3:67005702-67005721 | Msa1118400:three_prime_UTR | 30.0% | |
| ! | GAACCCTCTTTATTTATTGA+TGG | + | chr7_3:67005708-67005727 | None:intergenic | 30.0% |
| ! | ATTAGTTTGAAATTGTGGGT+AGG | + | chr7_3:67005749-67005768 | None:intergenic | 30.0% |
| ! | TTTTGAGCAATGAATGAAGT+GGG | + | chr7_3:67005788-67005807 | None:intergenic | 30.0% |
| !! | TTTTTGAGCAATGAATGAAG+TGG | + | chr7_3:67005789-67005808 | None:intergenic | 30.0% |
| TAACCCAACTAATACGAAAA+TGG | - | chr7_3:67006340-67006359 | Msa1118400:intron | 30.0% | |
| ! | ACACCATTTTCGTATTAGTT+GGG | + | chr7_3:67006346-67006365 | None:intergenic | 30.0% |
| ! | AACACCATTTTCGTATTAGT+TGG | + | chr7_3:67006347-67006366 | None:intergenic | 30.0% |
| AGAAAAGAAATAGCCAAAGA+TGG | + | chr7_3:67006618-67006637 | None:intergenic | 30.0% | |
| CACTATTCATACATATGTCT+TGG | - | chr7_3:67006720-67006739 | Msa1118400:intron | 30.0% | |
| AATCTAATCCAAACACACAA+AGG | + | chr7_3:67006809-67006828 | None:intergenic | 30.0% | |
| ! | ATGATTTTGTCTCCAAAACT+TGG | - | chr7_3:67006937-67006956 | Msa1118400:intron | 30.0% |
| TATAAAGTAGCTTCTGTGTT+AGG | - | chr7_3:67006975-67006994 | Msa1118400:intron | 30.0% | |
| !!! | GTATTTCTGACTTGTTGTTT+TGG | - | chr7_3:67007121-67007140 | Msa1118400:intron | 30.0% |
| AACTCAACAGAAGAGTTAAA+AGG | + | chr7_3:67007380-67007399 | None:intergenic | 30.0% | |
| TGTGATCAACAACTTTGATA+AGG | + | chr7_3:67008093-67008112 | None:intergenic | 30.0% | |
| !! | TTGGTTCTTTAAAACTAGTG+AGG | - | chr7_3:67008162-67008181 | Msa1118400:CDS | 30.0% |
| !! | TGGTTCTTTAAAACTAGTGA+GGG | - | chr7_3:67008163-67008182 | Msa1118400:CDS | 30.0% |
| ! | GTGATTTTACAAATGACAAC+AGG | + | chr7_3:67008253-67008272 | None:intergenic | 30.0% |
| TAAAGAGCAAATATGTGCAA+AGG | + | chr7_3:67008671-67008690 | None:intergenic | 30.0% | |
| !! | AATATCCAACTGTTTTGTTC+TGG | - | chr7_3:67008707-67008726 | Msa1118400:intron | 30.0% |
| !! | ATATCCAACTGTTTTGTTCT+GGG | - | chr7_3:67008708-67008727 | Msa1118400:intron | 30.0% |
| ! | AAAAGATTAAAGTACCCAGT+AGG | + | chr7_3:67008880-67008899 | None:intergenic | 30.0% |
| TTCATTTCCACATACATGTT+TGG | - | chr7_3:67008904-67008923 | Msa1118400:intron | 30.0% | |
| !!! | ACAGTCTTTTTTGCATATGT+AGG | - | chr7_3:67009014-67009033 | Msa1118400:intron | 30.0% |
| AGTTGTAGTCAAGGTAAAAT+TGG | + | chr7_3:67009160-67009179 | None:intergenic | 30.0% | |
| CCAATAAAAAGTTGTAGTCA+AGG | + | chr7_3:67009169-67009188 | None:intergenic | 30.0% | |
| ! | CCTTGACTACAACTTTTTAT+TGG | - | chr7_3:67009166-67009185 | Msa1118400:intron | 30.0% |
| !!! | TCATGGAAGTTATTTTTGTG+TGG | + | chr7_3:67009201-67009220 | None:intergenic | 30.0% |
| TATAATCGAAGGATGTTCAA+TGG | - | chr7_3:67009351-67009370 | Msa1118400:intron | 30.0% | |
| TCAGGATCAATTGCATAATA+AGG | + | chr7_3:67009515-67009534 | None:intergenic | 30.0% | |
| !! | GTAACTTCATAAAGTTTTGG+TGG | - | chr7_3:67009598-67009617 | Msa1118400:intron | 30.0% |
| ! | ATTAATGGATACCTCTGAAA+TGG | - | chr7_3:67009739-67009758 | Msa1118400:CDS | 30.0% |
| TAAATAATTGGCCATTTCAG+AGG | + | chr7_3:67009753-67009772 | None:intergenic | 30.0% | |
| ! | ATATAAAATCTTGGTGGATG+TGG | - | chr7_3:67009925-67009944 | Msa1118400:CDS | 30.0% |
| AGGACTGTTCATATCTTATA+AGG | - | chr7_3:67009995-67010014 | Msa1118400:intron | 30.0% | |
| !! | CTGAGAAGTTTTGTGATAAA+TGG | + | chr7_3:67010113-67010132 | None:intergenic | 30.0% |
| !!! | GTATTTTGATTTTCTACTGC+AGG | - | chr7_3:67010483-67010502 | Msa1118400:intron | 30.0% |
| TGATTTCTACAATTGAATCC+TGG | + | chr7_3:67010606-67010625 | None:intergenic | 30.0% | |
| AATCAAAGTCGAATATGAAG+AGG | - | chr7_3:67010621-67010640 | Msa1118400:intron | 30.0% | |
| AGAAATAAGAGGGTAATCAA+TGG | + | chr7_3:67010701-67010720 | None:intergenic | 30.0% | |
| AACGGTGTTTAGAAATAAGA+GGG | + | chr7_3:67010711-67010730 | None:intergenic | 30.0% | |
| TTATAACTCACAGTTGTCTT+TGG | + | chr7_3:67010734-67010753 | None:intergenic | 30.0% | |
| ATAGAGATTGATAAAGGAGA+AGG | + | chr7_3:67010761-67010780 | None:intergenic | 30.0% | |
| TTGCCTTTCTTTCTGTTATT+TGG | - | chr7_3:67010934-67010953 | Msa1118400:intron | 30.0% | |
| ATGCCAAATAACAGAAAGAA+AGG | + | chr7_3:67010940-67010959 | None:intergenic | 30.0% | |
| ! | ACAACAAAACAAAAGGTGTA+AGG | + | chr7_3:67010976-67010995 | None:intergenic | 30.0% |
| !!! | CACCTTTTGTTTTGTTGTTT+TGG | - | chr7_3:67010978-67010997 | Msa1118400:intron | 30.0% |
| CTAAATAGAAGAAGAGTTGT+TGG | - | chr7_3:67011009-67011028 | Msa1118400:intron | 30.0% | |
| ! | CTTCATGTTTAACTTTCCTT+AGG | - | chr7_3:67011082-67011101 | Msa1118400:intron | 30.0% |
| ! | AACTGTTTTCATAAGCTATC+TGG | + | chr7_3:67011545-67011564 | None:intergenic | 30.0% |
| TAAAACAAACTGAGAGAAGT+AGG | - | chr7_3:67011793-67011812 | Msa1118400:intron | 30.0% | |
| AGAATTATGAACAGGAATCA+TGG | + | chr7_3:67011823-67011842 | None:intergenic | 30.0% | |
| TTCTATCATTTACCATTTGC+AGG | - | chr7_3:67011839-67011858 | Msa1118400:intron | 30.0% | |
| TCCTACCTACTTATTAATCT+TGG | - | chr7_3:67011914-67011933 | Msa1118400:intron | 30.0% | |
| CCTACCTACTTATTAATCTT+GGG | - | chr7_3:67011915-67011934 | Msa1118400:intron | 30.0% | |
| CTTACCCAAGATTAATAAGT+AGG | + | chr7_3:67011922-67011941 | None:intergenic | 30.0% | |
| !! | AGTTTTAATCCCTGAAAGAT+AGG | - | chr7_3:67012079-67012098 | Msa1118400:CDS | 30.0% |
| TCCAAAATACCTATCTTTCA+GGG | + | chr7_3:67012091-67012110 | None:intergenic | 30.0% | |
| TTCCAAAATACCTATCTTTC+AGG | + | chr7_3:67012092-67012111 | None:intergenic | 30.0% | |
| !!! | GTATCTCTTTTTCGATGTTT+TGG | + | chr7_3:67012252-67012271 | None:intergenic | 30.0% |
| GATACTTTGTCCTATTTATC+AGG | - | chr7_3:67012267-67012286 | Msa1118400:intron | 30.0% | |
| !! | GGTTTTAATCCCTGATAAAT+AGG | + | chr7_3:67012280-67012299 | None:intergenic | 30.0% |
| !!! | AACCGACGAATATTTTTTGT+AGG | - | chr7_3:67012296-67012315 | Msa1118400:intron | 30.0% |
| !!! | ACCGACGAATATTTTTTGTA+GGG | - | chr7_3:67012297-67012316 | Msa1118400:intron | 30.0% |
| TCCCTACAAAAAATATTCGT+CGG | + | chr7_3:67012301-67012320 | None:intergenic | 30.0% | |
| !! | CTTTTAGAGAACTATGAGTT+CGG | + | chr7_3:67012673-67012692 | None:intergenic | 30.0% |
| TCTATAGAGTTTAAGCAACA+TGG | + | chr7_3:67012751-67012770 | None:intergenic | 30.0% | |
| TGGTGGAGTTGTTATGAATA+AGG | + | chr7_3:67005688-67005707 | None:intergenic | 35.0% | |
| ! | CCCTCTTTATTTATTGATGG+TGG | + | chr7_3:67005705-67005724 | None:intergenic | 35.0% |
| TGCTCAAAAATCTAGACTTG+TGG | - | chr7_3:67005799-67005818 | Msa1118400:three_prime_UTR | 35.0% | |
| GCTCAAAAATCTAGACTTGT+GGG | - | chr7_3:67005800-67005819 | Msa1118400:three_prime_UTR | 35.0% | |
| !!! | TGTTGTTTTTCTTTGATGGG+TGG | - | chr7_3:67005882-67005901 | Msa1118400:three_prime_UTR | 35.0% |
| ! | CATGGAGATTTTTCACTAGA+AGG | - | chr7_3:67005922-67005941 | Msa1118400:three_prime_UTR | 35.0% |
| ! | ATTTTTCACTAGAAGGAAGC+AGG | - | chr7_3:67005929-67005948 | Msa1118400:three_prime_UTR | 35.0% |
| GTTTCTCATCTCATTGCAAT+TGG | - | chr7_3:67006002-67006021 | Msa1118400:CDS | 35.0% | |
| AGAAGCCCAGATGAAAAAAA+AGG | + | chr7_3:67006070-67006089 | None:intergenic | 35.0% | |
| GAGAAATGATGTTTGGACTT+TGG | - | chr7_3:67006179-67006198 | Msa1118400:intron | 35.0% | |
| TTGTCCTATCACTAAGCAAA+AGG | + | chr7_3:67006417-67006436 | None:intergenic | 35.0% | |
| ACTGATGCAAGAAACAATGA+AGG | + | chr7_3:67006447-67006466 | None:intergenic | 35.0% | |
| ATCAGTACATGCACATGATT+TGG | - | chr7_3:67006461-67006480 | Msa1118400:intron | 35.0% | |
| GATGATAACTTACTAGGTGT+TGG | - | chr7_3:67006531-67006550 | Msa1118400:intron | 35.0% | |
| !!! | GCTATTTCTTTTCTGATTGC+TGG | - | chr7_3:67006624-67006643 | Msa1118400:intron | 35.0% |
| !! | TGCTTTTTGTTATGCAGAGT+TGG | - | chr7_3:67006665-67006684 | Msa1118400:intron | 35.0% |
| TCATACATATGTCTTGGAGA+AGG | - | chr7_3:67006726-67006745 | Msa1118400:intron | 35.0% | |
| CATACATATGTCTTGGAGAA+GGG | - | chr7_3:67006727-67006746 | Msa1118400:intron | 35.0% | |
| TAAAAGGACAAAGCATAGCA+AGG | + | chr7_3:67006786-67006805 | None:intergenic | 35.0% | |
| ! | TCCTTTTACCTTTGTGTGTT+TGG | - | chr7_3:67006798-67006817 | Msa1118400:intron | 35.0% |
| TCCAAACACACAAAGGTAAA+AGG | + | chr7_3:67006802-67006821 | None:intergenic | 35.0% | |
| ! | TTTTCCTCGTGCTCATTATA+TGG | - | chr7_3:67007153-67007172 | Msa1118400:intron | 35.0% |
| !!! | TCTTTGTTTTCAGTGTTGCT+TGG | - | chr7_3:67007270-67007289 | Msa1118400:intron | 35.0% |
| AATCGTATATTCCAGTACCA+AGG | + | chr7_3:67007309-67007328 | None:intergenic | 35.0% | |
| ! | TTGGTACTGGAATATACGAT+TGG | - | chr7_3:67007308-67007327 | Msa1118400:intron | 35.0% |
| GCATAACTCCTAATCTTGTA+TGG | - | chr7_3:67007351-67007370 | Msa1118400:intron | 35.0% | |
| AAAGGACACCATACAAGATT+AGG | + | chr7_3:67007362-67007381 | None:intergenic | 35.0% | |
| ! | TGTTGAGTTTTTGCTTGCTT+TGG | - | chr7_3:67007391-67007410 | Msa1118400:intron | 35.0% |
| AATTCTTTAGTGAGTGAACC+AGG | - | chr7_3:67007453-67007472 | Msa1118400:CDS | 35.0% | |
| ATTCTTTAGTGAGTGAACCA+GGG | - | chr7_3:67007454-67007473 | Msa1118400:CDS | 35.0% | |
| CTGCACTACTAAAATTTCCT+GGG | + | chr7_3:67007485-67007504 | None:intergenic | 35.0% | |
| GGATGGAGTAATAAAGTCTT+AGG | + | chr7_3:67007619-67007638 | None:intergenic | 35.0% | |
| TGCTTATAATTGTGATCGGA+TGG | + | chr7_3:67007636-67007655 | None:intergenic | 35.0% | |
| CACACTACTATCTGATCATT+AGG | - | chr7_3:67008109-67008128 | Msa1118400:CDS | 35.0% | |
| ! | AACAGGTCATGTTTCCTTTT+TGG | + | chr7_3:67008236-67008255 | None:intergenic | 35.0% |
| !! | TTTGTATAGGCTCCACTTTT+TGG | - | chr7_3:67008420-67008439 | Msa1118400:CDS | 35.0% |
| ! | AGACAATCTACCGTTCTTTT+TGG | - | chr7_3:67008449-67008468 | Msa1118400:CDS | 35.0% |
| ATACCAAAATTGCTGCACAT+GGG | + | chr7_3:67008512-67008531 | None:intergenic | 35.0% | |
| AATACCAAAATTGCTGCACA+TGG | + | chr7_3:67008513-67008532 | None:intergenic | 35.0% | |
| TGTTACAGGACTCTTATGTT+TGG | - | chr7_3:67008536-67008555 | Msa1118400:CDS | 35.0% | |
| GTTACAGGACTCTTATGTTT+GGG | - | chr7_3:67008537-67008556 | Msa1118400:CDS | 35.0% | |
| TTACAGGACTCTTATGTTTG+GGG | - | chr7_3:67008538-67008557 | Msa1118400:CDS | 35.0% | |
| !!! | TTGCTTTTTGTGATTGTTGC+TGG | - | chr7_3:67008811-67008830 | Msa1118400:intron | 35.0% |
| TTCCACATACATGTTTGGTT+TGG | - | chr7_3:67008909-67008928 | Msa1118400:intron | 35.0% | |
| !!! | TATTTTCCCTTTGGAGTTGA+CGG | - | chr7_3:67008972-67008991 | Msa1118400:intron | 35.0% |
| !!! | GTTATTTTTGTGTGGCAATG+TGG | + | chr7_3:67009193-67009212 | None:intergenic | 35.0% |
| TAAGTTACGGTAAGAAGGAA+AGG | + | chr7_3:67009233-67009252 | None:intergenic | 35.0% | |
| ACACATAAGTTACGGTAAGA+AGG | + | chr7_3:67009238-67009257 | None:intergenic | 35.0% | |
| GACAAGTTTACTGTTTGTGA+TGG | - | chr7_3:67009642-67009661 | Msa1118400:intron | 35.0% | |
| AGGTATCCATTAATCTACCT+GGG | + | chr7_3:67009733-67009752 | None:intergenic | 35.0% | |
| TTGACGAGCAAAAAACTGAA+TGG | - | chr7_3:67010155-67010174 | Msa1118400:intron | 35.0% | |
| !! | AATTTTGATGGCAATGGCAA+GGG | - | chr7_3:67010206-67010225 | Msa1118400:CDS | 35.0% |
| ! | TGCAGTCTTAGCATTTTCTA+TGG | - | chr7_3:67010314-67010333 | Msa1118400:intron | 35.0% |
| ! | AACTCTTTTAGCATTCACCA+TGG | - | chr7_3:67010516-67010535 | Msa1118400:intron | 35.0% |
| GAACGGTGTTTAGAAATAAG+AGG | + | chr7_3:67010712-67010731 | None:intergenic | 35.0% | |
| CACTAAGAACAATCATTAGC+TGG | + | chr7_3:67011190-67011209 | None:intergenic | 35.0% | |
| TACCATCATATCCTTGTGTT+TGG | - | chr7_3:67011367-67011386 | Msa1118400:intron | 35.0% | |
| TACCAAACACAAGGATATGA+TGG | + | chr7_3:67011372-67011391 | None:intergenic | 35.0% | |
| ! | GTGTTAGGGTTTGTTTGTAT+TGG | - | chr7_3:67011406-67011425 | Msa1118400:CDS | 35.0% |
| !!! | CATGTCTATGAGCTGTTTTT+AGG | - | chr7_3:67011502-67011521 | Msa1118400:intron | 35.0% |
| CATGTTGATCTGTTAGTATC+AGG | - | chr7_3:67011737-67011756 | Msa1118400:intron | 35.0% | |
| !!! | CTTCTCTCAGTTTGTTTTAG+TGG | + | chr7_3:67011792-67011811 | None:intergenic | 35.0% |
| CCCAAGATTAATAAGTAGGT+AGG | + | chr7_3:67011918-67011937 | None:intergenic | 35.0% | |
| ! | TCCCTGAAAGATAGGTATTT+TGG | - | chr7_3:67012087-67012106 | Msa1118400:CDS | 35.0% |
| ATATAGTTCCACATGTGACA+AGG | - | chr7_3:67012194-67012213 | Msa1118400:CDS | 35.0% | |
| TATATAGTCCTTGTCACATG+TGG | + | chr7_3:67012205-67012224 | None:intergenic | 35.0% | |
| CTTGTATGTTTCTTTCAGAG+CGG | - | chr7_3:67012586-67012605 | Msa1118400:intron | 35.0% | |
| AGAAAATGCTTTCCAAGCTT+AGG | - | chr7_3:67012848-67012867 | Msa1118400:exon | 35.0% | |
| GAAAATGCTTTCCAAGCTTA+GGG | - | chr7_3:67012849-67012868 | Msa1118400:exon | 35.0% | |
| TTGTGGGTAGGTTCAGAATA+AGG | + | chr7_3:67005737-67005756 | None:intergenic | 40.0% | |
| ATGGGTGGTGTTTCACAAAA+GGG | - | chr7_3:67005897-67005916 | Msa1118400:three_prime_UTR | 40.0% | |
| GTGTTTCACAAAAGGGTTCA+TGG | - | chr7_3:67005904-67005923 | Msa1118400:three_prime_UTR | 40.0% | |
| !!! | AGAGGCTTAGTGTTTTGACT+TGG | + | chr7_3:67005963-67005982 | None:intergenic | 40.0% |
| GATAACGCTTTAGCAAGAAG+AGG | + | chr7_3:67005981-67006000 | None:intergenic | 40.0% | |
| ! | AAACAGATACGGTGTCAGAT+AGG | - | chr7_3:67006294-67006313 | Msa1118400:intron | 40.0% |
| CCTATCACTAAGCAAAAGGT+GGG | + | chr7_3:67006413-67006432 | None:intergenic | 40.0% | |
| TCCTATCACTAAGCAAAAGG+TGG | + | chr7_3:67006414-67006433 | None:intergenic | 40.0% | |
| !! | CTAGGTGTTGGTTCAACAAT+TGG | - | chr7_3:67006543-67006562 | Msa1118400:intron | 40.0% |
| TCACGTAGATGTGTTCAAAC+AGG | + | chr7_3:67007046-67007065 | None:intergenic | 40.0% | |
| ! | GAGGGTGGAGATTTTCTATT+TGG | - | chr7_3:67007226-67007245 | Msa1118400:intron | 40.0% |
| !! | TTCAGTGTTGCTTGGTTGAT+CGG | - | chr7_3:67007278-67007297 | Msa1118400:intron | 40.0% |
| GTACTGGAATATACGATTGG+TGG | - | chr7_3:67007311-67007330 | Msa1118400:intron | 40.0% | |
| CCTGCACTACTAAAATTTCC+TGG | + | chr7_3:67007486-67007505 | None:intergenic | 40.0% | |
| !! | CCAGGAAATTTTAGTAGTGC+AGG | - | chr7_3:67007483-67007502 | Msa1118400:CDS | 40.0% |
| ! | GAAGCATTAACAACAGGAAC+AGG | + | chr7_3:67007946-67007965 | None:intergenic | 40.0% |
| !! | CGAGAAGAAGCATTAACAAC+AGG | + | chr7_3:67007952-67007971 | None:intergenic | 40.0% |
| ! | TCTGATCATTAGGAAGTGTG+TGG | - | chr7_3:67008119-67008138 | Msa1118400:CDS | 40.0% |
| ! | CTGATCATTAGGAAGTGTGT+GGG | - | chr7_3:67008120-67008139 | Msa1118400:CDS | 40.0% |
| TTGTCTAGACCACCAAAAAG+TGG | + | chr7_3:67008435-67008454 | None:intergenic | 40.0% | |
| TATCAATCCCAGGAATATGC+TGG | + | chr7_3:67008479-67008498 | None:intergenic | 40.0% | |
| ACTCTTATGTTTGGGGATCA+AGG | - | chr7_3:67008545-67008564 | Msa1118400:intron | 40.0% | |
| AGAGCAAATATGTGCAAAGG+AGG | + | chr7_3:67008668-67008687 | None:intergenic | 40.0% | |
| AACTCCCAGAACAAAACAGT+TGG | + | chr7_3:67008715-67008734 | None:intergenic | 40.0% | |
| ! | CTTTTTGTGATTGTTGCTGG+TGG | - | chr7_3:67008814-67008833 | Msa1118400:intron | 40.0% |
| ATTGTTGCTGGTGGTTACAT+GGG | - | chr7_3:67008823-67008842 | Msa1118400:intron | 40.0% | |
| !!! | ATTTTCCCTTTGGAGTTGAC+GGG | - | chr7_3:67008973-67008992 | Msa1118400:intron | 40.0% |
| CTTACCGTAACTTATGTGTG+TGG | - | chr7_3:67009239-67009258 | Msa1118400:CDS | 40.0% | |
| AGAGCCACACACATAAGTTA+CGG | + | chr7_3:67009246-67009265 | None:intergenic | 40.0% | |
| GTGTTGTGGAATGTATATGC+TGG | - | chr7_3:67009463-67009482 | Msa1118400:intron | 40.0% | |
| TCGGAAAATGCAGAGGATAT+GGG | + | chr7_3:67009542-67009561 | None:intergenic | 40.0% | |
| GGCAGCTACATTATAAATGC+TGG | - | chr7_3:67009663-67009682 | Msa1118400:intron | 40.0% | |
| TACTTCCCCAGGTAGATTAA+TGG | - | chr7_3:67009724-67009743 | Msa1118400:CDS | 40.0% | |
| GGTATCCATTAATCTACCTG+GGG | + | chr7_3:67009732-67009751 | None:intergenic | 40.0% | |
| ! | GAGGTATCCATTAATCTACC+TGG | + | chr7_3:67009734-67009753 | None:intergenic | 40.0% |
| TGGATGTGGAATGAAGTGTA+TGG | - | chr7_3:67009939-67009958 | Msa1118400:CDS | 40.0% | |
| !! | GAATTTTGATGGCAATGGCA+AGG | - | chr7_3:67010205-67010224 | Msa1118400:CDS | 40.0% |
| GTAATTATTGTGCCCTTGAC+AGG | + | chr7_3:67010282-67010301 | None:intergenic | 40.0% | |
| ! | GTCAAGGGCACAATAATTAC+TGG | - | chr7_3:67010282-67010301 | Msa1118400:CDS | 40.0% |
| CATGAGAACATGCTCTTTCA+TGG | + | chr7_3:67010398-67010417 | None:intergenic | 40.0% | |
| TGCACATACATTTCCTTGAG+TGG | + | chr7_3:67010438-67010457 | None:intergenic | 40.0% | |
| ! | TCTTTTAGCATTCACCATGG+TGG | - | chr7_3:67010519-67010538 | Msa1118400:intron | 40.0% |
| ACAATTGAATCCTGGAGAGA+AGG | + | chr7_3:67010598-67010617 | None:intergenic | 40.0% | |
| CAATCTCGCGTAACATCTAA+AGG | + | chr7_3:67010676-67010695 | None:intergenic | 40.0% | |
| ! | ACTCACAGTTGTCTTTGGAA+CGG | + | chr7_3:67010729-67010748 | None:intergenic | 40.0% |
| ATAGAAGAAGAGTTGTTGGG+TGG | - | chr7_3:67011013-67011032 | Msa1118400:intron | 40.0% | |
| ACCATAGCGATCATATGCTT+AGG | - | chr7_3:67011036-67011055 | Msa1118400:intron | 40.0% | |
| CCATAGCGATCATATGCTTA+GGG | - | chr7_3:67011037-67011056 | Msa1118400:intron | 40.0% | |
| CATAGCGATCATATGCTTAG+GGG | - | chr7_3:67011038-67011057 | Msa1118400:intron | 40.0% | |
| AACATGAAGCTGCATATGTG+AGG | + | chr7_3:67011071-67011090 | None:intergenic | 40.0% | |
| ! | TTTTCTCAAACTGCACTTGC+AGG | - | chr7_3:67011131-67011150 | Msa1118400:intron | 40.0% |
| TTTCTCAAACTGCACTTGCA+GGG | - | chr7_3:67011132-67011151 | Msa1118400:intron | 40.0% | |
| ATTCGTCTTCCTAACCTGTA+TGG | - | chr7_3:67011297-67011316 | Msa1118400:intron | 40.0% | |
| CATCTTGATCCATACAGGTT+AGG | + | chr7_3:67011309-67011328 | None:intergenic | 40.0% | |
| TGCATCATCTTGATCCATAC+AGG | + | chr7_3:67011314-67011333 | None:intergenic | 40.0% | |
| GTATGGATCAAGATGATGCA+AGG | - | chr7_3:67011314-67011333 | Msa1118400:intron | 40.0% | |
| CAACATGTCATCTACATCAG+CGG | + | chr7_3:67011724-67011743 | None:intergenic | 40.0% | |
| GGACATATGAAACCTGCAAA+TGG | + | chr7_3:67011854-67011873 | None:intergenic | 40.0% | |
| TTGATGAGAATGCAAGCTAC+AGG | + | chr7_3:67011893-67011912 | None:intergenic | 40.0% | |
| TTTCTTTCAGAGCGGAAACA+TGG | - | chr7_3:67012594-67012613 | Msa1118400:intron | 40.0% | |
| CTTTCGTCAACTTGACTTAC+TGG | + | chr7_3:67012710-67012729 | None:intergenic | 40.0% | |
| GTTTAAGCAACATGGCTTCT+GGG | + | chr7_3:67012743-67012762 | None:intergenic | 40.0% | |
| AGTTTAAGCAACATGGCTTC+TGG | + | chr7_3:67012744-67012763 | None:intergenic | 40.0% | |
| CTATAGAACTTAGTGCGTAG+AGG | - | chr7_3:67012764-67012783 | Msa1118400:CDS | 40.0% | |
| TGGGTAGGTTCAGAATAAGG+AGG | + | chr7_3:67005734-67005753 | None:intergenic | 45.0% | |
| GATGGGTGGTGTTTCACAAA+AGG | - | chr7_3:67005896-67005915 | Msa1118400:three_prime_UTR | 45.0% | |
| ! | CCCACCTTTTGCTTAGTGAT+AGG | - | chr7_3:67006410-67006429 | Msa1118400:intron | 45.0% |
| ! | GTTGGTTCAACAATTGGTGC+TGG | - | chr7_3:67006549-67006568 | Msa1118400:intron | 45.0% |
| !! | TGGTGCTGGAGTGTATGTTT+TGG | - | chr7_3:67006563-67006582 | Msa1118400:intron | 45.0% |
| !!! | GCTGGAGTGTATGTTTTGGT+TGG | - | chr7_3:67006567-67006586 | Msa1118400:intron | 45.0% |
| !! | ACAGTAGCTAGAGAGCATTC+TGG | - | chr7_3:67006591-67006610 | Msa1118400:intron | 45.0% |
| ! | AGAGCATTCTGGACCATCTT+TGG | - | chr7_3:67006602-67006621 | Msa1118400:intron | 45.0% |
| TCCTCGTGCTCATTATATGG+TGG | - | chr7_3:67007156-67007175 | Msa1118400:intron | 45.0% | |
| ACCACCATATAATGAGCACG+AGG | + | chr7_3:67007160-67007179 | None:intergenic | 45.0% | |
| TTTAGTGAGTGAACCAGGGA+CGG | - | chr7_3:67007458-67007477 | Msa1118400:CDS | 45.0% | |
| AATGCTTCTTCTCGCTCTCA+CGG | - | chr7_3:67007958-67007977 | Msa1118400:intron | 45.0% | |
| ! | TTTAAAACTAGTGAGGGCCC+AGG | - | chr7_3:67008169-67008188 | Msa1118400:CDS | 45.0% |
| !!! | CCTTTTTGGTTCACTGACCA+GGG | + | chr7_3:67008222-67008241 | None:intergenic | 45.0% |
| !!! | TCCTTTTTGGTTCACTGACC+AGG | + | chr7_3:67008223-67008242 | None:intergenic | 45.0% |
| !!! | GTATAGGCTCCACTTTTTGG+TGG | - | chr7_3:67008423-67008442 | Msa1118400:CDS | 45.0% |
| TCCTGGGATTGATATTGTCG+TGG | - | chr7_3:67008485-67008504 | Msa1118400:CDS | 45.0% | |
| TCCACGACAATATCAATCCC+AGG | + | chr7_3:67008489-67008508 | None:intergenic | 45.0% | |
| CTTATGTTTGGGGATCAAGG+AGG | - | chr7_3:67008548-67008567 | Msa1118400:intron | 45.0% | |
| TACATACATGCAGAGCACAG+TGG | - | chr7_3:67008753-67008772 | Msa1118400:intron | 45.0% | |
| GATTGTTGCTGGTGGTTACA+TGG | - | chr7_3:67008822-67008841 | Msa1118400:intron | 45.0% | |
| GGTTACATGGGATTCAAGTC+TGG | - | chr7_3:67008835-67008854 | Msa1118400:intron | 45.0% | |
| ACATGGGATTCAAGTCTGGA+TGG | - | chr7_3:67008839-67008858 | Msa1118400:intron | 45.0% | |
| CATGGGATTCAAGTCTGGAT+GGG | - | chr7_3:67008840-67008859 | Msa1118400:intron | 45.0% | |
| CGGGATATGAACTTCCTACT+GGG | - | chr7_3:67008863-67008882 | Msa1118400:intron | 45.0% | |
| GGCCAAACCAAACATGTATG+TGG | + | chr7_3:67008914-67008933 | None:intergenic | 45.0% | |
| TTATACCTCTTCAGCAGTGC+TGG | + | chr7_3:67009054-67009073 | None:intergenic | 45.0% | |
| AGGAAAGGAAACTGCACTCA+TGG | + | chr7_3:67009218-67009237 | None:intergenic | 45.0% | |
| !! | GCTTCACTGTTTCTGTGTTG+TGG | - | chr7_3:67009449-67009468 | Msa1118400:intron | 45.0% |
| ! | TATGCTGGTCTCTGTTGTTG+TGG | - | chr7_3:67009478-67009497 | Msa1118400:intron | 45.0% |
| GGAAAATGCAGAGGATATGG+GGG | + | chr7_3:67009540-67009559 | None:intergenic | 45.0% | |
| CGGAAAATGCAGAGGATATG+GGG | + | chr7_3:67009541-67009560 | None:intergenic | 45.0% | |
| GTCGGAAAATGCAGAGGATA+TGG | + | chr7_3:67009543-67009562 | None:intergenic | 45.0% | |
| ! | TTCGCAGCCACGAATTTTGA+TGG | - | chr7_3:67010194-67010213 | Msa1118400:CDS | 45.0% |
| !! | GCCACGAATTTTGATGGCAA+TGG | - | chr7_3:67010200-67010219 | Msa1118400:CDS | 45.0% |
| GCCATTGCCATCAAAATTCG+TGG | + | chr7_3:67010204-67010223 | None:intergenic | 45.0% | |
| ! | CACACTCTAGTTCCTGTCAA+GGG | - | chr7_3:67010267-67010286 | Msa1118400:CDS | 45.0% |
| ATGGAAGTCTCTGATCTTGC+AGG | - | chr7_3:67010333-67010352 | Msa1118400:intron | 45.0% | |
| TGGAAGTCTCTGATCTTGCA+GGG | - | chr7_3:67010334-67010353 | Msa1118400:intron | 45.0% | |
| ! | TTTTCTACTGCAGGTCAGTG+TGG | - | chr7_3:67010492-67010511 | Msa1118400:intron | 45.0% |
| TTTCTACTGCAGGTCAGTGT+GGG | - | chr7_3:67010493-67010512 | Msa1118400:intron | 45.0% | |
| ATTGAATCCTGGAGAGAAGG+AGG | + | chr7_3:67010595-67010614 | None:intergenic | 45.0% | |
| CCCTAAGCATATGATCGCTA+TGG | + | chr7_3:67011040-67011059 | None:intergenic | 45.0% | |
| CAATGCAAAGCGAACAGAAC+TGG | + | chr7_3:67011245-67011264 | None:intergenic | 45.0% | |
| TCTGTTCGCTTTGCATTGTG+TGG | - | chr7_3:67011247-67011266 | Msa1118400:intron | 45.0% | |
| TTTGCATTGTGTGGAGTTGG+AGG | - | chr7_3:67011256-67011275 | Msa1118400:intron | 45.0% | |
| GATGATGCAAGGCACAACTT+TGG | - | chr7_3:67011325-67011344 | Msa1118400:intron | 45.0% | |
| GACGTAAAACCTTGTGAGAC+TGG | - | chr7_3:67011449-67011468 | Msa1118400:CDS | 45.0% | |
| TCTCTTCAACCAGTCTCACA+AGG | + | chr7_3:67011461-67011480 | None:intergenic | 45.0% | |
| ! | GACTGGTTGAAGAGAGCTTA+TGG | - | chr7_3:67011466-67011485 | Msa1118400:intron | 45.0% |
| ATTAGGACCCTAGTGTGAGT+AGG | - | chr7_3:67011684-67011703 | Msa1118400:intron | 45.0% | |
| ACAGGAAGCAGTGGAACAAA+TGG | + | chr7_3:67011875-67011894 | None:intergenic | 45.0% | |
| ! | CATGGTTGCGTGTTTCTGTA+TGG | - | chr7_3:67012612-67012631 | Msa1118400:intron | 45.0% |
| ! | GTTGCGTGTTTCTGTATGGT+TGG | - | chr7_3:67012616-67012635 | Msa1118400:intron | 45.0% |
| GTTTCTGTATGGTTGGCAAC+AGG | - | chr7_3:67012623-67012642 | Msa1118400:intron | 45.0% | |
| CAAATATAGGGCCCTAAGCT+TGG | + | chr7_3:67012863-67012882 | None:intergenic | 45.0% | |
| AGGTGACAGTACTTGTGTAC+TGG | - | chr7_3:67012985-67013004 | Msa1118400:five_prime_UTR | 45.0% | |
| ! | GACAGTACTTGTGTACTGGT+TGG | - | chr7_3:67012989-67013008 | Msa1118400:five_prime_UTR | 45.0% |
| !!! | TTTTTTTATTGAATATATTT+TGG | + | chr7_3:67007541-67007560 | None:intergenic | 5.0% |
| !! | TTTAAGAAAAAAATATTATA+AGG | - | chr7_3:67012363-67012382 | Msa1118400:intron | 5.0% |
| !! | CTGATTGCTGGATTAGCAGC+TGG | - | chr7_3:67006636-67006655 | Msa1118400:intron | 50.0% |
| CTTGTAGATGCCCTTCTGCT+GGG | - | chr7_3:67006688-67006707 | Msa1118400:intron | 50.0% | |
| GATATGCACTCCCAGCAGAA+GGG | + | chr7_3:67006701-67006720 | None:intergenic | 50.0% | |
| TGATATGCACTCCCAGCAGA+AGG | + | chr7_3:67006702-67006721 | None:intergenic | 50.0% | |
| ! | TGTTGCTTGGTTGATCGGCT+GGG | - | chr7_3:67007283-67007302 | Msa1118400:intron | 50.0% |
| GTAGCTTCGTTGCTACCTCT+CGG | + | chr7_3:67007513-67007532 | None:intergenic | 50.0% | |
| ! | TTTGGTTCACTGACCAGGGA+CGG | + | chr7_3:67008218-67008237 | None:intergenic | 50.0% |
| CCCTGGTCAGTGAACCAAAA+AGG | - | chr7_3:67008219-67008238 | Msa1118400:CDS | 50.0% | |
| TGCTGGCGTGCCAAAAAGAA+CGG | + | chr7_3:67008462-67008481 | None:intergenic | 50.0% | |
| ! | GGACCCATGTGCAGCAATTT+TGG | - | chr7_3:67008506-67008525 | Msa1118400:CDS | 50.0% |
| ATGCAGAGCACAGTGGTACA+AGG | - | chr7_3:67008760-67008779 | Msa1118400:intron | 50.0% | |
| GCGGGATATGAACTTCCTAC+TGG | - | chr7_3:67008862-67008881 | Msa1118400:intron | 50.0% | |
| AGCATCCCGTCAACTCCAAA+GGG | + | chr7_3:67008981-67009000 | None:intergenic | 50.0% | |
| AAGCATCCCGTCAACTCCAA+AGG | + | chr7_3:67008982-67009001 | None:intergenic | 50.0% | |
| CCTAGTGGCAAATCTCGTTG+AGG | + | chr7_3:67009422-67009441 | None:intergenic | 50.0% | |
| CCTCAACGAGATTTGCCACT+AGG | - | chr7_3:67009419-67009438 | Msa1118400:intron | 50.0% | |
| CGAGATTTGCCACTAGGCAT+TGG | - | chr7_3:67009425-67009444 | Msa1118400:intron | 50.0% | |
| ! | AGTGAAGCACCAATGCCTAG+TGG | + | chr7_3:67009437-67009456 | None:intergenic | 50.0% |
| CTGGTCTCTGTTGTTGTGGT+TGG | - | chr7_3:67009482-67009501 | Msa1118400:intron | 50.0% | |
| ! | TCCTCTGCATTTTCCGACCA+TGG | - | chr7_3:67009545-67009564 | Msa1118400:intron | 50.0% |
| ! | CCTCTGCATTTTCCGACCAT+GGG | - | chr7_3:67009546-67009565 | Msa1118400:intron | 50.0% |
| TTTCCGACCATGGGATGCAA+TGG | - | chr7_3:67009555-67009574 | Msa1118400:intron | 50.0% | |
| TTCCGACCATGGGATGCAAT+GGG | - | chr7_3:67009556-67009575 | Msa1118400:intron | 50.0% | |
| ! | TTGATGGCAATGGCAAGGGA+TGG | - | chr7_3:67010210-67010229 | Msa1118400:CDS | 50.0% |
| ! | GCACACTCTAGTTCCTGTCA+AGG | - | chr7_3:67010266-67010285 | Msa1118400:CDS | 50.0% |
| ATGCTAAGACTGCAGCAGCT+AGG | + | chr7_3:67010308-67010327 | None:intergenic | 50.0% | |
| AGTCTCTGATCTTGCAGGGA+TGG | - | chr7_3:67010338-67010357 | Msa1118400:intron | 50.0% | |
| CAGCACAGATATTGCCACCA+TGG | + | chr7_3:67010536-67010555 | None:intergenic | 50.0% | |
| ! | GGCACTGGGACTTTATTTGG+AGG | + | chr7_3:67010574-67010593 | None:intergenic | 50.0% |
| !! | GGAGGCACTGGGACTTTATT+TGG | + | chr7_3:67010577-67010596 | None:intergenic | 50.0% |
| CGCTTTGCATTGTGTGGAGT+TGG | - | chr7_3:67011253-67011272 | Msa1118400:intron | 50.0% | |
| !! | GGAGGCACTCTACTTGTTTC+TGG | - | chr7_3:67011274-67011293 | Msa1118400:intron | 50.0% |
| AGGCACAACTTTGGTCACTC+TGG | - | chr7_3:67011334-67011353 | Msa1118400:intron | 50.0% | |
| CACAACTTTGGTCACTCTGG+AGG | - | chr7_3:67011337-67011356 | Msa1118400:intron | 50.0% | |
| TGATGCGCCTACTCACACTA+GGG | + | chr7_3:67011694-67011713 | None:intergenic | 50.0% | |
| ATGATGCGCCTACTCACACT+AGG | + | chr7_3:67011695-67011714 | None:intergenic | 50.0% | |
| TGTCATCTACATCAGCGGCT+AGG | + | chr7_3:67011719-67011738 | None:intergenic | 50.0% | |
| ATGCAAGCTACAGGAAGCAG+TGG | + | chr7_3:67011884-67011903 | None:intergenic | 50.0% | |
| TAAGCAACATGGCTTCTGGG+AGG | + | chr7_3:67012740-67012759 | None:intergenic | 50.0% | |
| GCTTGTAGATGCCCTTCTGC+TGG | - | chr7_3:67006687-67006706 | Msa1118400:intron | 55.0% | |
| !! | GTGTTGCTTGGTTGATCGGC+TGG | - | chr7_3:67007282-67007301 | Msa1118400:intron | 55.0% |
| AAATTTCCTGGGTCCGTCCC+TGG | + | chr7_3:67007474-67007493 | None:intergenic | 55.0% | |
| CTTCGTTGCTACCTCTCGGT+TGG | + | chr7_3:67007509-67007528 | None:intergenic | 55.0% | |
| TTGGCACGCCAGCATATTCC+TGG | - | chr7_3:67008468-67008487 | Msa1118400:CDS | 55.0% | |
| TGGCACGCCAGCATATTCCT+GGG | - | chr7_3:67008469-67008488 | Msa1118400:CDS | 55.0% | |
| GGGATTCAAGTCTGGATGGG+CGG | - | chr7_3:67008843-67008862 | Msa1118400:intron | 55.0% | |
| GGATTCAAGTCTGGATGGGC+GGG | - | chr7_3:67008844-67008863 | Msa1118400:intron | 55.0% | |
| AGTTGCCAGCACTGCTGAAG+AGG | - | chr7_3:67009046-67009065 | Msa1118400:CDS | 55.0% | |
| !! | GCAGAGGATATGGGGGTATC+AGG | + | chr7_3:67009533-67009552 | None:intergenic | 55.0% |
| CCCATGGTCGGAAAATGCAG+AGG | + | chr7_3:67009549-67009568 | None:intergenic | 55.0% | |
| ! | AGCTCTCTGCTCAGCGTTGA+TGG | - | chr7_3:67009695-67009714 | Msa1118400:CDS | 55.0% |
| !! | GCTCTCTGCTCAGCGTTGAT+GGG | - | chr7_3:67009696-67009715 | Msa1118400:CDS | 55.0% |
| !! | TCTGCTCAGCGTTGATGGGT+GGG | - | chr7_3:67009700-67009719 | Msa1118400:CDS | 55.0% |
| TTGGTTGATCGGCTGGGCCT+TGG | - | chr7_3:67007289-67007308 | Msa1118400:intron | 60.0% | |
| AGTAGTGCAGGCCAACCGAG+AGG | - | chr7_3:67007495-67007514 | Msa1118400:CDS | 60.0% | |
| ACCCACGTGTAGGGTCCTGT+GGG | + | chr7_3:67008195-67008214 | None:intergenic | 60.0% | |
| GGAGTTGACGGGATGCTTGC+TGG | - | chr7_3:67008984-67009003 | Msa1118400:intron | 60.0% | |
| GGCCCATTGCATCCCATGGT+CGG | + | chr7_3:67009561-67009580 | None:intergenic | 60.0% | |
| !! | CTCTGCTCAGCGTTGATGGG+TGG | - | chr7_3:67009699-67009718 | Msa1118400:CDS | 60.0% |
| GATGGGTGGGATACTTCCCC+AGG | - | chr7_3:67009713-67009732 | Msa1118400:CDS | 60.0% | |
| !! | CCTGGAGAGAAGGAGGCACT+GGG | + | chr7_3:67010588-67010607 | None:intergenic | 60.0% |
| ! | TCCTGGAGAGAAGGAGGCAC+TGG | + | chr7_3:67010589-67010608 | None:intergenic | 60.0% |
| GATCGGCTGGGCCTTGGTAC+TGG | - | chr7_3:67007295-67007314 | Msa1118400:intron | 65.0% | |
| AGTGAACCAGGGACGGACCC+AGG | - | chr7_3:67007465-67007484 | Msa1118400:CDS | 65.0% | |
| GTGTAGGGTCCTGTGGGCCT+GGG | + | chr7_3:67008189-67008208 | None:intergenic | 65.0% | |
| GCCCACAGGACCCTACACGT+GGG | - | chr7_3:67008191-67008210 | Msa1118400:CDS | 65.0% | |
| GACCCACGTGTAGGGTCCTG+TGG | + | chr7_3:67008196-67008215 | None:intergenic | 65.0% | |
| CAGGGACGGACCCACGTGTA+GGG | + | chr7_3:67008204-67008223 | None:intergenic | 65.0% | |
| ACGCGGCCCATTGCATCCCA+TGG | + | chr7_3:67009565-67009584 | None:intergenic | 65.0% | |
| CCCAGTGCCTCCTTCTCTCC+AGG | - | chr7_3:67010585-67010604 | Msa1118400:intron | 65.0% | |
| GGTGGCGCTGCTGTTGCTCG+TGG | - | chr7_3:67007329-67007348 | Msa1118400:intron | 70.0% | |
| TAGTGAGGGCCCAGGCCCAC+AGG | - | chr7_3:67008177-67008196 | Msa1118400:CDS | 70.0% | |
| CGTGTAGGGTCCTGTGGGCC+TGG | + | chr7_3:67008190-67008209 | None:intergenic | 70.0% | |
| GGCCCACAGGACCCTACACG+TGG | - | chr7_3:67008190-67008209 | Msa1118400:CDS | 70.0% | |
| CCAGGGACGGACCCACGTGT+AGG | + | chr7_3:67008205-67008224 | None:intergenic | 70.0% | |
| CCTACACGTGGGTCCGTCCC+TGG | - | chr7_3:67008202-67008221 | Msa1118400:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 67005672 | 67013089 | 67005672 | ID=Msa1118400;Name=Msa1118400 |
| chr7_3 | mRNA | 67005672 | 67013089 | 67005672 | ID=Msa1118400-mRNA-1;Parent=Msa1118400;Name=Msa1118400-mRNA-1;_AED=0.08;_eAED=0.08;_QI=225|1|1|1|1|1|14|329|616 |
| chr7_3 | exon | 67005672 | 67006157 | 67005672 | ID=Msa1118400-mRNA-1:exon:16382;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67006825 | 67006900 | 67006825 | ID=Msa1118400-mRNA-1:exon:16381;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67007403 | 67007515 | 67007403 | ID=Msa1118400-mRNA-1:exon:16380;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67007658 | 67007754 | 67007658 | ID=Msa1118400-mRNA-1:exon:16379;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67008019 | 67008256 | 67008019 | ID=Msa1118400-mRNA-1:exon:16378;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67008402 | 67008560 | 67008402 | ID=Msa1118400-mRNA-1:exon:16377;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67009027 | 67009093 | 67009027 | ID=Msa1118400-mRNA-1:exon:16376;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67009179 | 67009351 | 67009179 | ID=Msa1118400-mRNA-1:exon:16375;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67009694 | 67009790 | 67009694 | ID=Msa1118400-mRNA-1:exon:16374;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67009877 | 67009995 | 67009877 | ID=Msa1118400-mRNA-1:exon:16373;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67010192 | 67010332 | 67010192 | ID=Msa1118400-mRNA-1:exon:16372;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67011394 | 67011478 | 67011394 | ID=Msa1118400-mRNA-1:exon:16371;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67012013 | 67012214 | 67012013 | ID=Msa1118400-mRNA-1:exon:16370;Parent=Msa1118400-mRNA-1 |
| chr7_3 | exon | 67012738 | 67013089 | 67012738 | ID=Msa1118400-mRNA-1:exon:16369;Parent=Msa1118400-mRNA-1 |
| chr7_3 | five_prime_UTR | 67012865 | 67013089 | 67012865 | ID=Msa1118400-mRNA-1:five_prime_utr;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67012738 | 67012864 | 67012738 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67012013 | 67012214 | 67012013 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67011394 | 67011478 | 67011394 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67010192 | 67010332 | 67010192 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67009877 | 67009995 | 67009877 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67009694 | 67009790 | 67009694 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67009179 | 67009351 | 67009179 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67009027 | 67009093 | 67009027 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67008402 | 67008560 | 67008402 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67008019 | 67008256 | 67008019 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67007658 | 67007754 | 67007658 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67007403 | 67007515 | 67007403 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67006825 | 67006900 | 67006825 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | CDS | 67006001 | 67006157 | 67006001 | ID=Msa1118400-mRNA-1:cds;Parent=Msa1118400-mRNA-1 |
| chr7_3 | three_prime_UTR | 67005672 | 67006000 | 67005672 | ID=Msa1118400-mRNA-1:three_prime_utr;Parent=Msa1118400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
