Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159090 | XP_003624709.1 | 94.164 | 634 | 20 | 2 | 1 | 633 | 1 | 618 | 0.0 | 1188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159090 | sp|Q9ASS7|CAAT2_ARATH | 65.835 | 641 | 193 | 5 | 3 | 633 | 11 | 635 | 0.0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159090 | G7L1J3 | 94.164 | 634 | 20 | 2 | 1 | 633 | 1 | 618 | 0.0 | 1188 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0712610 | Msa1159090 | -0.818258 | 2.153219e-52 | -8.615850e-47 |
| Msa1032130 | Msa1159090 | 0.816891 | 4.376313e-52 | -8.615850e-47 |
| Msa1118400 | Msa1159090 | 0.934714 | 2.633443e-96 | -8.615850e-47 |
| Msa1126520 | Msa1159090 | -0.825645 | 4.187943e-54 | -8.615850e-47 |
| Msa1159090 | Msa1356790 | -0.815015 | 1.147975e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159090 | MtrunA17_Chr7g0254061 | 94.164 | 634 | 20 | 2 | 1 | 633 | 1 | 618 | 0.0 | 1188 |
| Msa1159090 | MtrunA17_Chr6g0460911 | 68.960 | 625 | 165 | 4 | 3 | 623 | 17 | 616 | 0.0 | 862 |
| Msa1159090 | MtrunA17_Chr6g0460901 | 68.339 | 638 | 172 | 5 | 3 | 633 | 15 | 629 | 0.0 | 862 |
| Msa1159090 | MtrunA17_Chr6g0460881 | 67.834 | 628 | 176 | 5 | 3 | 620 | 9 | 620 | 0.0 | 851 |
| Msa1159090 | MtrunA17_Chr6g0460891 | 68.130 | 615 | 174 | 5 | 10 | 620 | 16 | 612 | 0.0 | 837 |
| Msa1159090 | MtrunA17_Chr7g0254011 | 60.222 | 631 | 221 | 4 | 16 | 633 | 23 | 636 | 0.0 | 760 |
| Msa1159090 | MtrunA17_Chr1g0160231 | 35.135 | 407 | 235 | 4 | 25 | 428 | 61 | 441 | 7.25e-70 | 238 |
| Msa1159090 | MtrunA17_Chr7g0215781 | 35.227 | 440 | 245 | 8 | 12 | 436 | 22 | 436 | 4.16e-67 | 229 |
| Msa1159090 | MtrunA17_Chr8g0381021 | 34.586 | 399 | 236 | 4 | 31 | 428 | 72 | 446 | 2.13e-66 | 228 |
| Msa1159090 | MtrunA17_Chr1g0210461 | 33.649 | 422 | 251 | 5 | 14 | 429 | 36 | 434 | 1.03e-64 | 223 |
| Msa1159090 | MtrunA17_Chr8g0381031 | 34.336 | 399 | 237 | 4 | 31 | 428 | 73 | 447 | 6.93e-63 | 219 |
| Msa1159090 | MtrunA17_Chr8g0381051 | 32.381 | 420 | 258 | 4 | 12 | 428 | 55 | 451 | 8.03e-62 | 216 |
| Msa1159090 | MtrunA17_Chr2g0296921 | 30.698 | 430 | 261 | 5 | 10 | 428 | 43 | 446 | 9.35e-62 | 215 |
| Msa1159090 | MtrunA17_Chr4g0055481 | 33.649 | 422 | 261 | 2 | 14 | 435 | 26 | 428 | 1.73e-54 | 195 |
| Msa1159090 | MtrunA17_Chr8g0358951 | 30.221 | 407 | 254 | 6 | 24 | 428 | 75 | 453 | 4.08e-52 | 189 |
| Msa1159090 | MtrunA17_Chr6g0463361 | 32.673 | 101 | 68 | 0 | 328 | 428 | 1 | 101 | 9.05e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159090 | AT1G58030.1 | 65.835 | 641 | 193 | 5 | 3 | 633 | 11 | 635 | 0.0 | 843 |
| Msa1159090 | AT5G36940.1 | 64.320 | 625 | 186 | 6 | 9 | 623 | 2 | 599 | 0.0 | 787 |
| Msa1159090 | AT3G03720.1 | 60.032 | 618 | 213 | 6 | 14 | 624 | 4 | 594 | 0.0 | 744 |
| Msa1159090 | AT1G05940.4 | 37.736 | 424 | 229 | 8 | 16 | 427 | 27 | 427 | 2.17e-71 | 239 |
| Msa1159090 | AT1G05940.3 | 37.736 | 424 | 229 | 8 | 16 | 427 | 27 | 427 | 4.72e-71 | 239 |
| Msa1159090 | AT1G05940.1 | 37.736 | 424 | 229 | 8 | 16 | 427 | 27 | 427 | 1.07e-70 | 239 |
| Msa1159090 | AT4G21120.1 | 34.597 | 422 | 246 | 7 | 12 | 428 | 48 | 444 | 8.11e-70 | 238 |
| Msa1159090 | AT5G04770.1 | 35.452 | 409 | 241 | 5 | 31 | 433 | 57 | 448 | 6.17e-67 | 229 |
| Msa1159090 | AT3G10600.1 | 35.584 | 385 | 219 | 5 | 53 | 429 | 78 | 441 | 1.94e-66 | 228 |
| Msa1159090 | AT2G34960.1 | 30.825 | 412 | 261 | 4 | 24 | 435 | 57 | 444 | 6.48e-63 | 218 |
| Msa1159090 | AT5G04770.2 | 35.097 | 359 | 212 | 4 | 31 | 385 | 57 | 398 | 6.06e-58 | 201 |
| Msa1159090 | AT1G17120.1 | 27.818 | 417 | 278 | 5 | 19 | 435 | 69 | 462 | 7.57e-53 | 191 |
| Msa1159090 | AT1G05940.2 | 35.455 | 330 | 186 | 5 | 103 | 427 | 2 | 309 | 3.31e-48 | 175 |
| Msa1159090 | AT3G10600.2 | 33.228 | 316 | 182 | 5 | 122 | 429 | 1 | 295 | 4.22e-46 | 169 |
| Msa1159090 | AT4G21120.2 | 35.048 | 311 | 175 | 6 | 120 | 428 | 9 | 294 | 8.67e-46 | 168 |
| Msa1159090 | AT5G04770.3 | 32.704 | 318 | 191 | 5 | 122 | 433 | 1 | 301 | 1.84e-41 | 156 |
Find 173 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGCACTGGGACTTTATT+TGG | 0.167755 | 7_4:-48677672 | None:intergenic |
| GGAGGCACTCTACTTGTTTC+TGG | 0.168457 | 7_4:+48678367 | Msa1159090:CDS |
| GGACCCATGTGCAGCAATTT+TGG | 0.245225 | 7_4:+48675602 | Msa1159090:CDS |
| TTTCTAAGCAACATGGCTTC+TGG | 0.252500 | 7_4:-48679834 | None:intergenic |
| AGAAGAATGTCATTATTAAA+TGG | 0.256203 | 7_4:+48679989 | Msa1159090:three_prime_UTR |
| GTCGGAAAATGCAGAGGATA+TGG | 0.257144 | 7_4:-48676638 | None:intergenic |
| CTTTCGTCAACTTGACTTAC+TGG | 0.257532 | 7_4:-48679800 | None:intergenic |
| TCCTACCTACTTATTAATCT+TGG | 0.265345 | 7_4:+48679007 | Msa1159090:CDS |
| TTGGCACGCCAGCATATTCC+TGG | 0.292633 | 7_4:+48675564 | Msa1159090:CDS |
| AGCTCTCTGCTCAGCGTTGA+TGG | 0.294768 | 7_4:+48676793 | Msa1159090:CDS |
| GTTACAGGACTCTTATGTTT+GGG | 0.299102 | 7_4:+48675633 | Msa1159090:CDS |
| TTATAACTCACAGTTGTCTT+TGG | 0.305623 | 7_4:-48677829 | None:intergenic |
| GCTTGTAGATGCCCTTCTGC+TGG | 0.307862 | 7_4:+48674556 | Msa1159090:CDS |
| AGAGCATTCTGGACCATCTT+TGG | 0.314125 | 7_4:+48674471 | Msa1159090:CDS |
| TATTTGGAGGAATATATCTT+AGG | 0.315952 | 7_4:-48677656 | None:intergenic |
| TCAGGATCAATTGCATAATA+AGG | 0.320193 | 7_4:-48676610 | None:intergenic |
| GGAGTTGACGGGATGCTTGC+TGG | 0.321468 | 7_4:+48676082 | Msa1159090:CDS |
| CTCTAGAAGAAAACAAATAT+AGG | 0.331820 | 7_4:-48679968 | None:intergenic |
| GAACCCTCTTTATTTATTGA+TGG | 0.332761 | 7_4:-48673577 | None:intergenic |
| ATGGAAGTCTCTGATCTTGC+AGG | 0.341448 | 7_4:+48677431 | Msa1159090:CDS |
| TTGTGGGTAGGTTCAGAATA+AGG | 0.355942 | 7_4:-48673606 | None:intergenic |
| CTAGGTGTTGGTTCAACAAT+TGG | 0.358972 | 7_4:+48674412 | Msa1159090:intron |
| GTCAAGGGCACAATAATTAC+TGG | 0.364044 | 7_4:+48677380 | Msa1159090:CDS |
| TGTTACAGGACTCTTATGTT+TGG | 0.366301 | 7_4:+48675632 | Msa1159090:CDS |
| GATTGTTGCTGGTGGTTACA+TGG | 0.372740 | 7_4:+48675920 | Msa1159090:CDS |
| TTCTAAGCAACATGGCTTCT+GGG | 0.374102 | 7_4:-48679833 | None:intergenic |
| TGGTGGAGTTGTTATGAATA+AGG | 0.375024 | 7_4:-48673557 | None:intergenic |
| GATCGGCTGGGCCTTGGTAC+TGG | 0.376671 | 7_4:+48675164 | Msa1159090:CDS |
| TCTAGAAGAAAACAAATATA+GGG | 0.378571 | 7_4:-48679967 | None:intergenic |
| CTTCATGTTTAACTTTCCTT+AGG | 0.381227 | 7_4:+48678176 | Msa1159090:CDS |
| CCTACCTACTTATTAATCTT+GGG | 0.382609 | 7_4:+48679008 | Msa1159090:CDS |
| ATTGAAGTGGGAAATTTAAT+CGG | 0.382765 | 7_4:-48673645 | None:intergenic |
| CTGGTCTCTGTTGTTGTGGT+TGG | 0.388475 | 7_4:+48676580 | Msa1159090:CDS |
| GTAGAATTTGTTTGAAATTG+TGG | 0.390900 | 7_4:-48673623 | None:intergenic |
| CGCTTTGCATTGTGTGGAGT+TGG | 0.393647 | 7_4:+48678346 | Msa1159090:CDS |
| GTTTCTCATCTCATTGCAAT+TGG | 0.397730 | 7_4:+48673877 | Msa1159090:CDS |
| GTGTTTCACAAAAGGGTTCA+TGG | 0.399956 | 7_4:+48673779 | Msa1159090:CDS |
| CTGATTGCTGGATTAGCAGC+TGG | 0.407148 | 7_4:+48674505 | Msa1159090:CDS |
| AGAAAATGCTTTCCAAGCTT+AGG | 0.407371 | 7_4:+48679943 | Msa1159090:three_prime_UTR |
| GCTTCACTGTTTCTGTGTTG+TGG | 0.419278 | 7_4:+48676547 | Msa1159090:CDS |
| GAACGGTGTTTAGAAATAAG+AGG | 0.419579 | 7_4:-48677807 | None:intergenic |
| TCCTGGAGAGAAGGAGGCAC+TGG | 0.423452 | 7_4:-48677684 | None:intergenic |
| GTGTTGCTTGGTTGATCGGC+TGG | 0.424415 | 7_4:+48675151 | Msa1159090:intron |
| TAGAATTTGTTTGAAATTGT+GGG | 0.424887 | 7_4:-48673622 | None:intergenic |
| GTAATTATTGTGCCCTTGAC+AGG | 0.427628 | 7_4:-48677377 | None:intergenic |
| GTTTCTGTATGGTTGGCAAC+AGG | 0.429237 | 7_4:+48679716 | Msa1159090:CDS |
| GAAAATGCTTTCCAAGCTTA+GGG | 0.432459 | 7_4:+48679944 | Msa1159090:three_prime_UTR |
| CCCAGTGCCTCCTTCTCTCC+AGG | 0.433918 | 7_4:+48677683 | Msa1159090:CDS |
| AAAGGACACCATACAAGATT+AGG | 0.433962 | 7_4:-48675228 | None:intergenic |
| CTAAATAGAAGAAGAGTTGT+TGG | 0.434209 | 7_4:+48678103 | Msa1159090:CDS |
| TTGGTTGATCGGCTGGGCCT+TGG | 0.435270 | 7_4:+48675158 | Msa1159090:CDS |
| CCATAGCGATCATATGCTTA+GGG | 0.435534 | 7_4:+48678131 | Msa1159090:CDS |
| GGGTGGTGGTGTTTCACAAA+AGG | 0.437070 | 7_4:+48673771 | Msa1159090:CDS |
| TGCATCATCTTGATCCATAC+AGG | 0.437181 | 7_4:-48678404 | None:intergenic |
| TTCAGTGTTGCTTGGTTGAT+CGG | 0.437536 | 7_4:+48675147 | Msa1159090:intron |
| CCCTCTTTATTTATTGATGG+TGG | 0.440441 | 7_4:-48673574 | None:intergenic |
| CAAATATAGGGCCCTAAGCT+TGG | 0.440621 | 7_4:-48679955 | None:intergenic |
| ACTCTTATGTTTGGGGATCA+AGG | 0.440693 | 7_4:+48675641 | Msa1159090:CDS |
| CTATACCTCTTCAGCAGTGC+TGG | 0.441974 | 7_4:-48676149 | None:intergenic |
| ACAGTAGCTAGAGAGCATTC+TGG | 0.453302 | 7_4:+48674460 | Msa1159090:CDS |
| CACTATTCATACATATGTCT+TGG | 0.455035 | 7_4:+48674589 | Msa1159090:CDS |
| GCCATTGCCATCAAAATTCG+TGG | 0.458247 | 7_4:-48677299 | None:intergenic |
| TGGTGCTGGAGTGTATGTTT+TGG | 0.459837 | 7_4:+48674432 | Msa1159090:CDS |
| CATGGTTGCGTGTTTCTGTA+TGG | 0.462201 | 7_4:+48679705 | Msa1159090:CDS |
| CATCTTGATCCATACAGGTT+AGG | 0.463705 | 7_4:-48678399 | None:intergenic |
| GGCAGCTACATTATAAATGC+TGG | 0.464167 | 7_4:+48676761 | Msa1159090:intron |
| TCGGAAAATGCAGAGGATAT+GGG | 0.465269 | 7_4:-48676637 | None:intergenic |
| GCGGGATATGAACTTCCTAC+TGG | 0.469114 | 7_4:+48675960 | Msa1159090:CDS |
| CTTGTAGATGCCCTTCTGCT+GGG | 0.472594 | 7_4:+48674557 | Msa1159090:CDS |
| TATAATCGAAGGATGTTCAA+TGG | 0.473155 | 7_4:+48676449 | Msa1159090:intron |
| ACAGGAAGCAGTGGAACAAA+TGG | 0.473365 | 7_4:-48678965 | None:intergenic |
| ATTCGTCTTCCTAACCTGTA+TGG | 0.483625 | 7_4:+48678390 | Msa1159090:CDS |
| CTCTGCTCAGCGTTGATGGG+TGG | 0.484464 | 7_4:+48676797 | Msa1159090:CDS |
| CTTACCCAAGATTAATAAGT+AGG | 0.486970 | 7_4:-48679012 | None:intergenic |
| TGATTTCTACAATTGAATCC+TGG | 0.490418 | 7_4:-48677701 | None:intergenic |
| CGAGATTTGCCACTAGGCAT+TGG | 0.490521 | 7_4:+48676523 | Msa1159090:CDS |
| TTCCGACCATGGGATGCAAT+GGG | 0.491894 | 7_4:+48676654 | Msa1159090:CDS |
| CGGAAAATGCAGAGGATATG+GGG | 0.492152 | 7_4:-48676636 | None:intergenic |
| GCTCTCTGCTCAGCGTTGAT+GGG | 0.495567 | 7_4:+48676794 | Msa1159090:CDS |
| ACCATAGCGATCATATGCTT+AGG | 0.496774 | 7_4:+48678130 | Msa1159090:CDS |
| CAATCTCGCGTAACATCTAA+AGG | 0.500840 | 7_4:-48677771 | None:intergenic |
| GGATTCAAGTCTGGATGGGC+GGG | 0.501989 | 7_4:+48675942 | Msa1159090:CDS |
| TGTTGCTTGGTTGATCGGCT+GGG | 0.504889 | 7_4:+48675152 | Msa1159090:CDS |
| GAATATGAAGAGGAAAATAT+CGG | 0.505903 | 7_4:+48677729 | Msa1159090:CDS |
| GGTTACATGGGATTCAAGTC+TGG | 0.507654 | 7_4:+48675933 | Msa1159090:CDS |
| TAATGTTTCACTTCATCGAC+AGG | 0.507756 | 7_4:+48676486 | Msa1159090:CDS |
| TCCACCATCAATAAATAAAG+AGG | 0.509282 | 7_4:+48673573 | Msa1159090:five_prime_UTR |
| TAAATAGAAGAAGAGTTGTT+GGG | 0.509609 | 7_4:+48678104 | Msa1159090:CDS |
| GTTGGTTCAACAATTGGTGC+TGG | 0.513215 | 7_4:+48674418 | Msa1159090:CDS |
| AGAAATAAGAGGGTAATCAA+TGG | 0.513407 | 7_4:-48677796 | None:intergenic |
| TTTCCGACCATGGGATGCAA+TGG | 0.515484 | 7_4:+48676653 | Msa1159090:CDS |
| GATGATGCAAGGCACAACTT+TGG | 0.517587 | 7_4:+48678418 | Msa1159090:CDS |
| TTGATGAGAATGCAAGCTAC+AGG | 0.518109 | 7_4:-48678983 | None:intergenic |
| TTACAGGACTCTTATGTTTG+GGG | 0.522945 | 7_4:+48675634 | Msa1159090:CDS |
| CATACATATGTCTTGGAGAA+GGG | 0.524958 | 7_4:+48674596 | Msa1159090:CDS |
| TTGAGCAATGAATATTGAAG+TGG | 0.526959 | 7_4:-48673658 | None:intergenic |
| TCTGCTCAGCGTTGATGGGT+GGG | 0.531375 | 7_4:+48676798 | Msa1159090:CDS |
| CCTGGAGAGAAGGAGGCACT+GGG | 0.531508 | 7_4:-48677683 | None:intergenic |
| AGCATCCCGTCAACTCCAAA+GGG | 0.533518 | 7_4:-48676076 | None:intergenic |
| TGAGCAATGAATATTGAAGT+GGG | 0.534288 | 7_4:-48673657 | None:intergenic |
| AACGGTGTTTAGAAATAAGA+GGG | 0.534923 | 7_4:-48677806 | None:intergenic |
| AGAAAAGAAATAGCCAAAGA+TGG | 0.535093 | 7_4:-48674484 | None:intergenic |
| GGCACTGGGACTTTATTTGG+AGG | 0.535944 | 7_4:-48677669 | None:intergenic |
| AGTTGCCAGCACTGCTGAAG+AGG | 0.536481 | 7_4:+48676144 | Msa1159090:CDS |
| GGTGGTGGTGTTTCACAAAA+GGG | 0.539611 | 7_4:+48673772 | Msa1159090:CDS |
| TGGCACGCCAGCATATTCCT+GGG | 0.540143 | 7_4:+48675565 | Msa1159090:CDS |
| GGGATTCAAGTCTGGATGGG+CGG | 0.541106 | 7_4:+48675941 | Msa1159090:CDS |
| TATGCTGGTCTCTGTTGTTG+TGG | 0.542503 | 7_4:+48676576 | Msa1159090:CDS |
| AATACCAAAATTGCTGCACA+TGG | 0.543302 | 7_4:-48675606 | None:intergenic |
| CCTCAACGAGATTTGCCACT+AGG | 0.543791 | 7_4:+48676517 | Msa1159090:CDS |
| ACATGGGATTCAAGTCTGGA+TGG | 0.543971 | 7_4:+48675937 | Msa1159090:CDS |
| GTTGCGTGTTTCTGTATGGT+TGG | 0.549450 | 7_4:+48679709 | Msa1159090:CDS |
| TTTGCATTGTGTGGAGTTGG+AGG | 0.551093 | 7_4:+48678349 | Msa1159090:CDS |
| AAGCATCCCGTCAACTCCAA+AGG | 0.552340 | 7_4:-48676077 | None:intergenic |
| CGGGATATGAACTTCCTACT+GGG | 0.552815 | 7_4:+48675961 | Msa1159090:CDS |
| TTTCTACTGCAGGTCAGTGT+GGG | 0.553632 | 7_4:+48677591 | Msa1159090:intron |
| AGTCTCTGATCTTGCAGGGA+TGG | 0.553646 | 7_4:+48677436 | Msa1159090:CDS |
| TGATATGCACTCCCAGCAGA+AGG | 0.558377 | 7_4:-48674568 | None:intergenic |
| AGGCACAACTTTGGTCACTC+TGG | 0.558581 | 7_4:+48678427 | Msa1159090:CDS |
| ATTGTTGCTGGTGGTTACAT+GGG | 0.563511 | 7_4:+48675921 | Msa1159090:CDS |
| GGTGGCGCTGCTGTTGCTCG+TGG | 0.566332 | 7_4:+48675198 | Msa1159090:CDS |
| ACAATTGAATCCTGGAGAGA+AGG | 0.568236 | 7_4:-48677693 | None:intergenic |
| CAAATTGTAAATAATTAATG+AGG | 0.568676 | 7_4:-48680031 | None:intergenic |
| TCTGTTCGCTTTGCATTGTG+TGG | 0.569512 | 7_4:+48678340 | Msa1159090:CDS |
| AGGTGACAGTACTTGTGTAC+TGG | 0.573426 | 7_4:+48680080 | Msa1159090:three_prime_UTR |
| TATCAATCCCAGGAATATGC+TGG | 0.574107 | 7_4:-48675572 | None:intergenic |
| CCCTAAGCATATGATCGCTA+TGG | 0.574884 | 7_4:-48678131 | None:intergenic |
| GACAGTACTTGTGTACTGGT+TGG | 0.576109 | 7_4:+48680084 | Msa1159090:three_prime_UTR |
| TCATACATATGTCTTGGAGA+AGG | 0.576894 | 7_4:+48674595 | Msa1159090:CDS |
| TCCTGGGATTGATATTGTCG+TGG | 0.576948 | 7_4:+48675581 | Msa1159090:CDS |
| AATCAAAGTCGAATATGAAG+AGG | 0.578096 | 7_4:+48677719 | Msa1159090:CDS |
| ATGCAGAGCACAGTGGTACA+AGG | 0.579065 | 7_4:+48675858 | Msa1159090:intron |
| GTGTTGTGGAATGTATATGC+TGG | 0.580843 | 7_4:+48676561 | Msa1159090:CDS |
| TTTCTTTCAGAGCGGAAACA+TGG | 0.581146 | 7_4:+48679687 | Msa1159090:intron |
| ATGCTAAGACTGCAGCAGCT+AGG | 0.582418 | 7_4:-48677403 | None:intergenic |
| TCCACGACAATATCAATCCC+AGG | 0.587193 | 7_4:-48675582 | None:intergenic |
| CATGGGATTCAAGTCTGGAT+GGG | 0.589744 | 7_4:+48675938 | Msa1159090:CDS |
| GGCCCATTGCATCCCATGGT+CGG | 0.589864 | 7_4:-48676656 | None:intergenic |
| TTGATGGCAATGGCAAGGGA+TGG | 0.592065 | 7_4:+48677308 | Msa1159090:CDS |
| TTGGTACTGGAATATACGAT+TGG | 0.592891 | 7_4:+48675177 | Msa1159090:CDS |
| GTACTGGAATATACGATTGG+TGG | 0.594336 | 7_4:+48675180 | Msa1159090:CDS |
| CCCAAGATTAATAAGTAGGT+AGG | 0.595085 | 7_4:-48679008 | None:intergenic |
| ACGCGGCCCATTGCATCCCA+TGG | 0.599431 | 7_4:-48676660 | None:intergenic |
| ATTTGTTTGAAATTGTGGGT+AGG | 0.600543 | 7_4:-48673618 | None:intergenic |
| TGGAAGTCTCTGATCTTGCA+GGG | 0.601560 | 7_4:+48677432 | Msa1159090:CDS |
| CACACTCTAGTTCCTGTCAA+GGG | 0.608609 | 7_4:+48677365 | Msa1159090:CDS |
| AAAAGATTAAAGTACCCAGT+AGG | 0.617437 | 7_4:-48675975 | None:intergenic |
| ATTGAATCCTGGAGAGAAGG+AGG | 0.617882 | 7_4:-48677690 | None:intergenic |
| GATATGCACTCCCAGCAGAA+GGG | 0.619038 | 7_4:-48674567 | None:intergenic |
| GCACACTCTAGTTCCTGTCA+AGG | 0.620545 | 7_4:+48677364 | Msa1159090:CDS |
| CCACCATCAATAAATAAAGA+GGG | 0.621367 | 7_4:+48673574 | Msa1159090:five_prime_UTR |
| ATGCAAGCTACAGGAAGCAG+TGG | 0.621379 | 7_4:-48678974 | None:intergenic |
| GATAACGCTTTAGCAAGAAG+AGG | 0.622934 | 7_4:-48673853 | None:intergenic |
| ACTCACAGTTGTCTTTGGAA+CGG | 0.623297 | 7_4:-48677824 | None:intergenic |
| CTATAGAACTTAGTGCGTAG+AGG | 0.624378 | 7_4:+48679859 | Msa1159090:three_prime_UTR |
| CACAACTTTGGTCACTCTGG+AGG | 0.630302 | 7_4:+48678430 | Msa1159090:CDS |
| TATAGAGTTTCTAAGCAACA+TGG | 0.633350 | 7_4:-48679841 | None:intergenic |
| TGGGTAGGTTCAGAATAAGG+AGG | 0.634010 | 7_4:-48673603 | None:intergenic |
| GTATGGATCAAGATGATGCA+AGG | 0.639702 | 7_4:+48678407 | Msa1159090:CDS |
| CAGCACAGATATTGCCACCA+TGG | 0.640973 | 7_4:-48677631 | None:intergenic |
| AACATGAAGCTGCATATGTG+AGG | 0.644006 | 7_4:-48678162 | None:intergenic |
| ATAGAAGAAGAGTTGTTGGG+TGG | 0.647520 | 7_4:+48678107 | Msa1159090:CDS |
| CATAGCGATCATATGCTTAG+GGG | 0.658596 | 7_4:+48678132 | Msa1159090:CDS |
| CCCATGGTCGGAAAATGCAG+AGG | 0.669413 | 7_4:-48676644 | None:intergenic |
| CCTAGTGGCAAATCTCGTTG+AGG | 0.673365 | 7_4:-48676517 | None:intergenic |
| GGAAAATGCAGAGGATATGG+GGG | 0.673757 | 7_4:-48676635 | None:intergenic |
| TAAGCAACATGGCTTCTGGG+AGG | 0.677591 | 7_4:-48679830 | None:intergenic |
| ATACCAAAATTGCTGCACAT+GGG | 0.679743 | 7_4:-48675605 | None:intergenic |
| AATCGTATATTCCAGTACCA+AGG | 0.694535 | 7_4:-48675175 | None:intergenic |
| AGTGAAGCACCAATGCCTAG+TGG | 0.698160 | 7_4:-48676532 | None:intergenic |
| CTTATGTTTGGGGATCAAGG+AGG | 0.713389 | 7_4:+48675644 | Msa1159090:CDS |
| TTTCACAAAAGGGTTCATGG+AGG | 0.743867 | 7_4:+48673782 | Msa1159090:CDS |
| TACATACATGCAGAGCACAG+TGG | 0.778446 | 7_4:+48675851 | Msa1159090:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATAAAAAAATCAAAA+GGG | - | chr7_4:48674028-48674047 | None:intergenic | 10.0% |
| !!! | TTTTGAATAAAAAAATCAAA+AGG | - | chr7_4:48674029-48674048 | None:intergenic | 10.0% |
| !!! | ATTAGTTTTATTGTATTTTT+TGG | + | chr7_4:48674717-48674736 | Msa1159090:intron | 10.0% |
| !! | ATTATAATAAGTATTAAGTT+TGG | - | chr7_4:48678000-48678019 | None:intergenic | 10.0% |
| !! | TCATAAAGAAAAAATAAGAT+AGG | - | chr7_4:48675077-48675096 | None:intergenic | 15.0% |
| !!! | TATCTTATTTTTTCTTTATG+AGG | + | chr7_4:48675076-48675095 | Msa1159090:intron | 15.0% |
| !!! | ATCTTATTTTTTCTTTATGA+GGG | + | chr7_4:48675077-48675096 | Msa1159090:intron | 15.0% |
| !! | AAGAATTAAAAAGTTAAAGT+TGG | - | chr7_4:48675309-48675328 | None:intergenic | 15.0% |
| !! | CTTACTAAATTATCATTATT+AGG | + | chr7_4:48676995-48677014 | Msa1159090:intron | 15.0% |
| !! | TAGGAATAAATATAAAATCT+TGG | + | chr7_4:48677014-48677033 | Msa1159090:intron | 15.0% |
| !! | ATAGAAATGCAATTTATATT+TGG | - | chr7_4:48677163-48677182 | None:intergenic | 15.0% |
| !! | TTATTTATGTCACAAAAAAA+TGG | - | chr7_4:48677344-48677363 | None:intergenic | 15.0% |
| !! | TAGAAAATCAAAATACATAT+CGG | - | chr7_4:48677577-48677596 | None:intergenic | 15.0% |
| !! | TTAATACTTATTATAATCTC+TGG | + | chr7_4:48678003-48678022 | Msa1159090:intron | 15.0% |
| !!! | ATTAAGTTGTTTATCTAATT+AGG | + | chr7_4:48678760-48678779 | Msa1159090:intron | 15.0% |
| !! | TTATTTAGATATTGAATTTC+TGG | - | chr7_4:48679095-48679114 | None:intergenic | 15.0% |
| !!! | TGAAAACTATTTTATTTTGA+GGG | - | chr7_4:48679247-48679266 | None:intergenic | 15.0% |
| !!! | ATGAAAACTATTTTATTTTG+AGG | - | chr7_4:48679248-48679267 | None:intergenic | 15.0% |
| !!! | TTCAATTACAGTTTATTTTT+GGG | - | chr7_4:48679538-48679557 | None:intergenic | 15.0% |
| !! | CAAATTGTAAATAATTAATG+AGG | - | chr7_4:48680034-48680053 | None:intergenic | 15.0% |
| !!! | TAGAATTTGTTTGAAATTGT+GGG | - | chr7_4:48673625-48673644 | None:intergenic | 20.0% |
| !!! | TTTTATCCTTTTTTTTCATC+TGG | + | chr7_4:48673932-48673951 | Msa1159090:intron | 20.0% |
| !!! | TTTATCCTTTTTTTTCATCT+GGG | + | chr7_4:48673933-48673952 | Msa1159090:intron | 20.0% |
| !!! | TTTTATGATGATAACTTACT+AGG | + | chr7_4:48674394-48674413 | Msa1159090:intron | 20.0% |
| !! | ATAGATATGTTTCTTTGTAT+AGG | + | chr7_4:48675503-48675522 | Msa1159090:intron | 20.0% |
| !!! | ATTAATAGATATTTTCCCTT+TGG | + | chr7_4:48676061-48676080 | Msa1159090:intron | 20.0% |
| !! | TTCGATTATATATCAATAGT+AGG | - | chr7_4:48676439-48676458 | None:intergenic | 20.0% |
| !! | TACTATTGATATATAATCGA+AGG | + | chr7_4:48676438-48676457 | Msa1159090:intron | 20.0% |
| !!! | TTTGTAACTTCATAAAGTTT+TGG | + | chr7_4:48676693-48676712 | Msa1159090:intron | 20.0% |
| !!! | AATATAATCAGTTGATACTA+GGG | - | chr7_4:48676879-48676898 | None:intergenic | 20.0% |
| !!! | AAATATAATCAGTTGATACT+AGG | - | chr7_4:48676880-48676899 | None:intergenic | 20.0% |
| !! | TCTGTAATTTCTCTTATATT+AGG | + | chr7_4:48676905-48676924 | Msa1159090:intron | 20.0% |
| !! | AACTTTAATTCAAAACATGA+AGG | - | chr7_4:48676947-48676966 | None:intergenic | 20.0% |
| !! | GAATAAATATAAAATCTTGG+TGG | + | chr7_4:48677017-48677036 | Msa1159090:intron | 20.0% |
| !! | AAATAAATTTACCAAACACA+AGG | - | chr7_4:48678474-48678493 | None:intergenic | 20.0% |
| !! | TTGTGTTTGGTAAATTTATT+TGG | + | chr7_4:48678473-48678492 | Msa1159090:intron | 20.0% |
| !! | AAATTTATTTGGATAGTGTT+AGG | + | chr7_4:48678484-48678503 | Msa1159090:intron | 20.0% |
| !! | AATTTATTTGGATAGTGTTA+GGG | + | chr7_4:48678485-48678504 | Msa1159090:intron | 20.0% |
| !! | TAAATGATAGAATTATGAAC+AGG | - | chr7_4:48678924-48678943 | None:intergenic | 20.0% |
| !!! | TCTTTTAATTTCTGTGATAT+AGG | + | chr7_4:48679115-48679134 | Msa1159090:intron | 20.0% |
| !!! | GAAAACTATTTTATTTTGAG+GGG | - | chr7_4:48679246-48679265 | None:intergenic | 20.0% |
| !! | TATTATAAGGACAAAGTTAA+TGG | + | chr7_4:48679469-48679488 | Msa1159090:intron | 20.0% |
| !!! | GTTCAATTACAGTTTATTTT+TGG | - | chr7_4:48679539-48679558 | None:intergenic | 20.0% |
| !! | AAAATAAAAGAAGAAACACA+AGG | + | chr7_4:48679564-48679583 | Msa1159090:intron | 20.0% |
| !!! | CTACTAATTTATGTGTTTTA+TGG | + | chr7_4:48679740-48679759 | Msa1159090:CDS | 20.0% |
| !! | TCTAGAAGAAAACAAATATA+GGG | - | chr7_4:48679970-48679989 | None:intergenic | 20.0% |
| !! | AGAAGAATGTCATTATTAAA+TGG | + | chr7_4:48679989-48680008 | Msa1159090:three_prime_UTR | 20.0% |
| !! | ATCATGTATAAAAAAGTAGT+AGG | + | chr7_4:48680060-48680079 | Msa1159090:three_prime_UTR | 20.0% |
| !! | GTAGAATTTGTTTGAAATTG+TGG | - | chr7_4:48673626-48673645 | None:intergenic | 25.0% |
| ! | ATTGAAGTGGGAAATTTAAT+CGG | - | chr7_4:48673648-48673667 | None:intergenic | 25.0% |
| !!! | TTGTTGTTGTTTTTCTTTGA+TGG | + | chr7_4:48673750-48673769 | Msa1159090:exon | 25.0% |
| !!! | TGTTGTTGTTTTTCTTTGAT+GGG | + | chr7_4:48673751-48673770 | Msa1159090:exon | 25.0% |
| !!! | TTGAATTCTGTTTTGAAACA+TGG | + | chr7_4:48673961-48673980 | Msa1159090:intron | 25.0% |
| ! | GATATAGAGATAAACAGATA+CGG | + | chr7_4:48674152-48674171 | Msa1159090:intron | 25.0% |
| !!! | TACGAAAATGGTGTTTTTTT+TGG | + | chr7_4:48674221-48674240 | Msa1159090:intron | 25.0% |
| !! | GTTTATAGTTTACTGTGTTT+TGG | + | chr7_4:48674352-48674371 | Msa1159090:intron | 25.0% |
| !!! | AGGATGAAAAGTTCTAAAAA+GGG | - | chr7_4:48674635-48674654 | None:intergenic | 25.0% |
| !!! | AAGGATGAAAAGTTCTAAAA+AGG | - | chr7_4:48674636-48674655 | None:intergenic | 25.0% |
| ! | TCTAATGTGATCTTATTATC+AGG | + | chr7_4:48674778-48674797 | Msa1159090:intron | 25.0% |
| !!! | TTTCTAGTAAAACCAAGTTT+TGG | - | chr7_4:48674821-48674840 | None:intergenic | 25.0% |
| ! | TACTCAAACATGTTAAAACT+TGG | - | chr7_4:48674884-48674903 | None:intergenic | 25.0% |
| !!! | TTATTTTTTCTTTATGAGGG+TGG | + | chr7_4:48675080-48675099 | Msa1159090:intron | 25.0% |
| ! | AGCAAATAAAGTGAATAGTT+TGG | + | chr7_4:48675388-48675407 | Msa1159090:intron | 25.0% |
| !!! | ATTTTGGTATTACTTGTTAC+AGG | + | chr7_4:48675618-48675637 | Msa1159090:CDS | 25.0% |
| ! | TGAATAATTGCTGAATGAAA+AGG | - | chr7_4:48675674-48675693 | None:intergenic | 25.0% |
| !!! | GACAAGTTTTAAGTAATAAG+AGG | - | chr7_4:48676033-48676052 | None:intergenic | 25.0% |
| !! | ATAATTTCATCAGCAGATTT+TGG | + | chr7_4:48676217-48676236 | Msa1159090:intron | 25.0% |
| !! | CTTGACTACAACTTTTTATT+GGG | + | chr7_4:48676265-48676284 | Msa1159090:intron | 25.0% |
| ! | TTACAAACTATAAACTTACG+CGG | - | chr7_4:48676680-48676699 | None:intergenic | 25.0% |
| ! | ACTAGGGAAGAATAAATAAT+TGG | - | chr7_4:48676863-48676882 | None:intergenic | 25.0% |
| ! | AATTTCTCTTATATTAGGTG+AGG | + | chr7_4:48676910-48676929 | Msa1159090:intron | 25.0% |
| ! | ATTTCTCTTATATTAGGTGA+GGG | + | chr7_4:48676911-48676930 | Msa1159090:intron | 25.0% |
| ! | ATAGTAAGACTCAATATATG+AGG | + | chr7_4:48677073-48677092 | Msa1159090:intron | 25.0% |
| ! | ATAAATTGCATTTCTATTGC+TGG | + | chr7_4:48677166-48677185 | Msa1159090:intron | 25.0% |
| !!! | AGTTTTGTGATAAATGGAAA+AGG | - | chr7_4:48677205-48677224 | None:intergenic | 25.0% |
| ! | TTTATGTCACAAAAAAATGG+TGG | - | chr7_4:48677341-48677360 | None:intergenic | 25.0% |
| ! | CCATTATCAATTACATAAAG+TGG | - | chr7_4:48677467-48677486 | None:intergenic | 25.0% |
| ! | CCACTTTATGTAATTGATAA+TGG | + | chr7_4:48677464-48677483 | Msa1159090:intron | 25.0% |
| ! | AAATGAATAATAACCACTCA+AGG | + | chr7_4:48677520-48677539 | Msa1159090:intron | 25.0% |
| ! | TATTTGGAGGAATATATCTT+AGG | - | chr7_4:48677659-48677678 | None:intergenic | 25.0% |
| ! | GAATATGAAGAGGAAAATAT+CGG | + | chr7_4:48677729-48677748 | Msa1159090:CDS | 25.0% |
| ! | TGTTTGATAGAGATTGATAA+AGG | - | chr7_4:48677865-48677884 | None:intergenic | 25.0% |
| ! | ATCCAAAACAACAAAACAAA+AGG | - | chr7_4:48678077-48678096 | None:intergenic | 25.0% |
| ! | TAAATAGAAGAAGAGTTGTT+GGG | + | chr7_4:48678104-48678123 | Msa1159090:CDS | 25.0% |
| ! | TTAACTATTAGACTAACCTA+AGG | - | chr7_4:48678195-48678214 | None:intergenic | 25.0% |
| ! | TCACATGTTTAATATGCATA+TGG | + | chr7_4:48679051-48679070 | Msa1159090:intron | 25.0% |
| !!! | AGTTTTAATCCCTGAAAAAT+AGG | + | chr7_4:48679172-48679191 | Msa1159090:intron | 25.0% |
| !!! | TCCAAAATACCTATTTTTCA+GGG | - | chr7_4:48679184-48679203 | None:intergenic | 25.0% |
| !!! | TTCCAAAATACCTATTTTTC+AGG | - | chr7_4:48679185-48679204 | None:intergenic | 25.0% |
| !! | ATGTGGAACTATATTCATTT+TGG | - | chr7_4:48679281-48679300 | None:intergenic | 25.0% |
| ! | ATACTTTGTCCTATTTATCA+GGG | + | chr7_4:48679361-48679380 | Msa1159090:intron | 25.0% |
| !!! | AAAGCATTTTCTTTTGTACA+AGG | - | chr7_4:48679935-48679954 | None:intergenic | 25.0% |
| !! | CTCTAGAAGAAAACAAATAT+AGG | - | chr7_4:48679971-48679990 | None:intergenic | 25.0% |
| TCCACCATCAATAAATAAAG+AGG | + | chr7_4:48673573-48673592 | Msa1159090:five_prime_UTR | 30.0% | |
| CCACCATCAATAAATAAAGA+GGG | + | chr7_4:48673574-48673593 | Msa1159090:five_prime_UTR | 30.0% | |
| ! | GAACCCTCTTTATTTATTGA+TGG | - | chr7_4:48673580-48673599 | None:intergenic | 30.0% |
| ! | ATTTGTTTGAAATTGTGGGT+AGG | - | chr7_4:48673621-48673640 | None:intergenic | 30.0% |
| TGAGCAATGAATATTGAAGT+GGG | - | chr7_4:48673660-48673679 | None:intergenic | 30.0% | |
| TTGAGCAATGAATATTGAAG+TGG | - | chr7_4:48673661-48673680 | None:intergenic | 30.0% | |
| ATTCAAAAAGAGACGATGTT+TGG | + | chr7_4:48674041-48674060 | Msa1159090:intron | 30.0% | |
| TAACCCAACTAATACGAAAA+TGG | + | chr7_4:48674209-48674228 | Msa1159090:intron | 30.0% | |
| ! | ACACCATTTTCGTATTAGTT+GGG | - | chr7_4:48674215-48674234 | None:intergenic | 30.0% |
| ! | AACACCATTTTCGTATTAGT+TGG | - | chr7_4:48674216-48674235 | None:intergenic | 30.0% |
| AGAAAAGAAATAGCCAAAGA+TGG | - | chr7_4:48674487-48674506 | None:intergenic | 30.0% | |
| CACTATTCATACATATGTCT+TGG | + | chr7_4:48674589-48674608 | Msa1159090:CDS | 30.0% | |
| AATCTAATCCAAACACACAA+AGG | - | chr7_4:48674678-48674697 | None:intergenic | 30.0% | |
| ! | ATGATTTTGTCTCCAAAACT+TGG | + | chr7_4:48674806-48674825 | Msa1159090:intron | 30.0% |
| TATAAAGTAGCTTCTGTGTT+AGG | + | chr7_4:48674844-48674863 | Msa1159090:intron | 30.0% | |
| !!! | GTATTTCTGACTTGTTGTTT+TGG | + | chr7_4:48674990-48675009 | Msa1159090:intron | 30.0% |
| AACTCAACAGAAGAGTTAAA+AGG | - | chr7_4:48675249-48675268 | None:intergenic | 30.0% | |
| ! | GTGATTTTACAAATGACAAC+AGG | - | chr7_4:48675349-48675368 | None:intergenic | 30.0% |
| !! | AGAGAAAATTCTAGTTCACA+CGG | - | chr7_4:48675725-48675744 | None:intergenic | 30.0% |
| ! | GAACTAGAATTTTCTCTTCT+TGG | + | chr7_4:48675728-48675747 | Msa1159090:intron | 30.0% |
| ! | TAGAATTTTCTCTTCTTGGT+TGG | + | chr7_4:48675732-48675751 | Msa1159090:intron | 30.0% |
| TAAAGAGCAAATATGTGCAA+AGG | - | chr7_4:48675767-48675786 | None:intergenic | 30.0% | |
| !! | AATATCCAACTGTTTTGTTC+TGG | + | chr7_4:48675805-48675824 | Msa1159090:intron | 30.0% |
| !! | ATATCCAACTGTTTTGTTCT+GGG | + | chr7_4:48675806-48675825 | Msa1159090:intron | 30.0% |
| ! | AAAAGATTAAAGTACCCAGT+AGG | - | chr7_4:48675978-48675997 | None:intergenic | 30.0% |
| TTCATTTCCACATACATGTT+TGG | + | chr7_4:48676002-48676021 | Msa1159090:intron | 30.0% | |
| !!! | ACAGTCTTTTTTGCATATGT+AGG | + | chr7_4:48676112-48676131 | Msa1159090:CDS | 30.0% |
| AGTTGTAGTCAAGGTAAAAT+TGG | - | chr7_4:48676258-48676277 | None:intergenic | 30.0% | |
| CCAATAAAAAGTTGTAGTCA+AGG | - | chr7_4:48676267-48676286 | None:intergenic | 30.0% | |
| ! | CCTTGACTACAACTTTTTAT+TGG | + | chr7_4:48676264-48676283 | Msa1159090:intron | 30.0% |
| !!! | TCATGGAAGTTATTTTTGTG+TGG | - | chr7_4:48676299-48676318 | None:intergenic | 30.0% |
| TATAATCGAAGGATGTTCAA+TGG | + | chr7_4:48676449-48676468 | Msa1159090:intron | 30.0% | |
| TCAGGATCAATTGCATAATA+AGG | - | chr7_4:48676613-48676632 | None:intergenic | 30.0% | |
| !! | GTAACTTCATAAAGTTTTGG+TGG | + | chr7_4:48676696-48676715 | Msa1159090:intron | 30.0% |
| ! | ATTAATGGATACCTCTGAAA+TGG | + | chr7_4:48676837-48676856 | Msa1159090:intron | 30.0% |
| TAAATAATTGGCCATTTCAG+AGG | - | chr7_4:48676851-48676870 | None:intergenic | 30.0% | |
| ! | ATATAAAATCTTGGTGGATG+TGG | + | chr7_4:48677023-48677042 | Msa1159090:intron | 30.0% |
| AGGACTGTTCATATCTTATA+AGG | + | chr7_4:48677093-48677112 | Msa1159090:intron | 30.0% | |
| !! | CTGAGAAGTTTTGTGATAAA+TGG | - | chr7_4:48677211-48677230 | None:intergenic | 30.0% |
| !!! | GTATTTTGATTTTCTACTGC+AGG | + | chr7_4:48677581-48677600 | Msa1159090:intron | 30.0% |
| TGATTTCTACAATTGAATCC+TGG | - | chr7_4:48677704-48677723 | None:intergenic | 30.0% | |
| AATCAAAGTCGAATATGAAG+AGG | + | chr7_4:48677719-48677738 | Msa1159090:CDS | 30.0% | |
| AGAAATAAGAGGGTAATCAA+TGG | - | chr7_4:48677799-48677818 | None:intergenic | 30.0% | |
| AACGGTGTTTAGAAATAAGA+GGG | - | chr7_4:48677809-48677828 | None:intergenic | 30.0% | |
| TTATAACTCACAGTTGTCTT+TGG | - | chr7_4:48677832-48677851 | None:intergenic | 30.0% | |
| ATAGAGATTGATAAAGGAGA+AGG | - | chr7_4:48677859-48677878 | None:intergenic | 30.0% | |
| TTGCCTTTCTTTCTGTTATT+TGG | + | chr7_4:48678028-48678047 | Msa1159090:intron | 30.0% | |
| ATGCCAAATAACAGAAAGAA+AGG | - | chr7_4:48678034-48678053 | None:intergenic | 30.0% | |
| ! | ACAACAAAACAAAAGGTGTA+AGG | - | chr7_4:48678070-48678089 | None:intergenic | 30.0% |
| !!! | CACCTTTTGTTTTGTTGTTT+TGG | + | chr7_4:48678072-48678091 | Msa1159090:intron | 30.0% |
| CTAAATAGAAGAAGAGTTGT+TGG | + | chr7_4:48678103-48678122 | Msa1159090:CDS | 30.0% | |
| ! | CTTCATGTTTAACTTTCCTT+AGG | + | chr7_4:48678176-48678195 | Msa1159090:CDS | 30.0% |
| ! | AACTGTTTTCATAAGCTATC+TGG | - | chr7_4:48678638-48678657 | None:intergenic | 30.0% |
| TAAAACAAACTGAGAGAAGT+AGG | + | chr7_4:48678886-48678905 | Msa1159090:intron | 30.0% | |
| AGAATTATGAACAGGAATCA+TGG | - | chr7_4:48678916-48678935 | None:intergenic | 30.0% | |
| TTCTATCATTTACCATTTGC+AGG | + | chr7_4:48678932-48678951 | Msa1159090:intron | 30.0% | |
| TCCTACCTACTTATTAATCT+TGG | + | chr7_4:48679007-48679026 | Msa1159090:CDS | 30.0% | |
| CCTACCTACTTATTAATCTT+GGG | + | chr7_4:48679008-48679027 | Msa1159090:CDS | 30.0% | |
| CTTACCCAAGATTAATAAGT+AGG | - | chr7_4:48679015-48679034 | None:intergenic | 30.0% | |
| ! | TCCCTGAAAAATAGGTATTT+TGG | + | chr7_4:48679180-48679199 | Msa1159090:intron | 30.0% |
| !!! | GTATCTCTTTTTCGATGTTT+TGG | - | chr7_4:48679345-48679364 | None:intergenic | 30.0% |
| GATACTTTGTCCTATTTATC+AGG | + | chr7_4:48679360-48679379 | Msa1159090:intron | 30.0% | |
| !! | GGTTTTAATCCCTGATAAAT+AGG | - | chr7_4:48679373-48679392 | None:intergenic | 30.0% |
| !!! | AACCGACGAATATTTTTTGT+AGG | + | chr7_4:48679389-48679408 | Msa1159090:intron | 30.0% |
| !!! | ACCGACGAATATTTTTTGTA+GGG | + | chr7_4:48679390-48679409 | Msa1159090:intron | 30.0% |
| TCCCTACAAAAAATATTCGT+CGG | - | chr7_4:48679394-48679413 | None:intergenic | 30.0% | |
| !! | CTTTTAGAGAACTATGAGTT+CGG | - | chr7_4:48679766-48679785 | None:intergenic | 30.0% |
| TATAGAGTTTCTAAGCAACA+TGG | - | chr7_4:48679844-48679863 | None:intergenic | 30.0% | |
| TGGTGGAGTTGTTATGAATA+AGG | - | chr7_4:48673560-48673579 | None:intergenic | 35.0% | |
| ! | CCCTCTTTATTTATTGATGG+TGG | - | chr7_4:48673577-48673596 | None:intergenic | 35.0% |
| TGCTCAAAAATCTAGACTTG+TGG | + | chr7_4:48673674-48673693 | Msa1159090:five_prime_UTR | 35.0% | |
| GCTCAAAAATCTAGACTTGT+GGG | + | chr7_4:48673675-48673694 | Msa1159090:five_prime_UTR | 35.0% | |
| !!! | TGTTGTTTTTCTTTGATGGG+TGG | + | chr7_4:48673754-48673773 | Msa1159090:exon | 35.0% |
| GTTTCTCATCTCATTGCAAT+TGG | + | chr7_4:48673877-48673896 | Msa1159090:CDS | 35.0% | |
| AGAAGCCCAGATGAAAAAAA+AGG | - | chr7_4:48673941-48673960 | None:intergenic | 35.0% | |
| TTGTCCTATCACTAAGCAAA+AGG | - | chr7_4:48674286-48674305 | None:intergenic | 35.0% | |
| ATCAGTACATGCACATGATT+TGG | + | chr7_4:48674330-48674349 | Msa1159090:intron | 35.0% | |
| GATGATAACTTACTAGGTGT+TGG | + | chr7_4:48674400-48674419 | Msa1159090:intron | 35.0% | |
| !!! | GCTATTTCTTTTCTGATTGC+TGG | + | chr7_4:48674493-48674512 | Msa1159090:CDS | 35.0% |
| !! | TGCTTTTTGTTATGCAGAGT+TGG | + | chr7_4:48674534-48674553 | Msa1159090:CDS | 35.0% |
| TCATACATATGTCTTGGAGA+AGG | + | chr7_4:48674595-48674614 | Msa1159090:CDS | 35.0% | |
| CATACATATGTCTTGGAGAA+GGG | + | chr7_4:48674596-48674615 | Msa1159090:CDS | 35.0% | |
| TAAAAGGACAAAGCATAGCA+AGG | - | chr7_4:48674655-48674674 | None:intergenic | 35.0% | |
| ! | TCCTTTTACCTTTGTGTGTT+TGG | + | chr7_4:48674667-48674686 | Msa1159090:intron | 35.0% |
| TCCAAACACACAAAGGTAAA+AGG | - | chr7_4:48674671-48674690 | None:intergenic | 35.0% | |
| ! | TTTTCCTCGTGCTCATTATA+TGG | + | chr7_4:48675022-48675041 | Msa1159090:intron | 35.0% |
| !!! | TCTTTGTTTTCAGTGTTGCT+TGG | + | chr7_4:48675139-48675158 | Msa1159090:intron | 35.0% |
| AATCGTATATTCCAGTACCA+AGG | - | chr7_4:48675178-48675197 | None:intergenic | 35.0% | |
| ! | TTGGTACTGGAATATACGAT+TGG | + | chr7_4:48675177-48675196 | Msa1159090:CDS | 35.0% |
| GCATAACTCCTAATCTTGTA+TGG | + | chr7_4:48675220-48675239 | Msa1159090:intron | 35.0% | |
| AAAGGACACCATACAAGATT+AGG | - | chr7_4:48675231-48675250 | None:intergenic | 35.0% | |
| ! | TGTTGAGTTTTTGCTTGCTT+TGG | + | chr7_4:48675260-48675279 | Msa1159090:intron | 35.0% |
| !! | TTTGTATAGGCTCCACTTTT+TGG | + | chr7_4:48675516-48675535 | Msa1159090:intron | 35.0% |
| ! | AGACAATCTACCGTTCTTTT+TGG | + | chr7_4:48675545-48675564 | Msa1159090:CDS | 35.0% |
| ATACCAAAATTGCTGCACAT+GGG | - | chr7_4:48675608-48675627 | None:intergenic | 35.0% | |
| AATACCAAAATTGCTGCACA+TGG | - | chr7_4:48675609-48675628 | None:intergenic | 35.0% | |
| TGTTACAGGACTCTTATGTT+TGG | + | chr7_4:48675632-48675651 | Msa1159090:CDS | 35.0% | |
| GTTACAGGACTCTTATGTTT+GGG | + | chr7_4:48675633-48675652 | Msa1159090:CDS | 35.0% | |
| TTACAGGACTCTTATGTTTG+GGG | + | chr7_4:48675634-48675653 | Msa1159090:CDS | 35.0% | |
| !!! | TTGCTTTTTGTGATTGTTGC+TGG | + | chr7_4:48675909-48675928 | Msa1159090:CDS | 35.0% |
| TTCCACATACATGTTTGGTT+TGG | + | chr7_4:48676007-48676026 | Msa1159090:intron | 35.0% | |
| !!! | TATTTTCCCTTTGGAGTTGA+CGG | + | chr7_4:48676070-48676089 | Msa1159090:CDS | 35.0% |
| !!! | GTTATTTTTGTGTGGCAATG+TGG | - | chr7_4:48676291-48676310 | None:intergenic | 35.0% |
| TAAGTTACGGTAAGAAGGAA+AGG | - | chr7_4:48676331-48676350 | None:intergenic | 35.0% | |
| ACACATAAGTTACGGTAAGA+AGG | - | chr7_4:48676336-48676355 | None:intergenic | 35.0% | |
| TAATGTTTCACTTCATCGAC+AGG | + | chr7_4:48676486-48676505 | Msa1159090:CDS | 35.0% | |
| GACAAGTTTACTGTTTGTGA+TGG | + | chr7_4:48676740-48676759 | Msa1159090:intron | 35.0% | |
| AGGTATCCATTAATCTACCT+GGG | - | chr7_4:48676831-48676850 | None:intergenic | 35.0% | |
| TGGATGTGGAATGAAGTATA+TGG | + | chr7_4:48677037-48677056 | Msa1159090:intron | 35.0% | |
| TTGACGAGCAAAAAACTGAA+TGG | + | chr7_4:48677253-48677272 | Msa1159090:intron | 35.0% | |
| !! | AATTTTGATGGCAATGGCAA+GGG | + | chr7_4:48677304-48677323 | Msa1159090:CDS | 35.0% |
| ! | TGCAGTCTTAGCATTTTCTA+TGG | + | chr7_4:48677412-48677431 | Msa1159090:CDS | 35.0% |
| ! | AACTCTTTTAGCATTCACCA+TGG | + | chr7_4:48677614-48677633 | Msa1159090:CDS | 35.0% |
| GAACGGTGTTTAGAAATAAG+AGG | - | chr7_4:48677810-48677829 | None:intergenic | 35.0% | |
| CACTAAGAACAATCATTAGC+TGG | - | chr7_4:48678283-48678302 | None:intergenic | 35.0% | |
| TACCATCATATCCTTGTGTT+TGG | + | chr7_4:48678460-48678479 | Msa1159090:intron | 35.0% | |
| TACCAAACACAAGGATATGA+TGG | - | chr7_4:48678465-48678484 | None:intergenic | 35.0% | |
| ! | GTGTTAGGGTTTGTTTGTAT+TGG | + | chr7_4:48678499-48678518 | Msa1159090:intron | 35.0% |
| !!! | CATGTCTATGAGCTGTTTTT+AGG | + | chr7_4:48678595-48678614 | Msa1159090:intron | 35.0% |
| CATGTTGATCTGTTAGTATC+AGG | + | chr7_4:48678830-48678849 | Msa1159090:intron | 35.0% | |
| !!! | CTTCTCTCAGTTTGTTTTAG+TGG | - | chr7_4:48678885-48678904 | None:intergenic | 35.0% |
| CCCAAGATTAATAAGTAGGT+AGG | - | chr7_4:48679011-48679030 | None:intergenic | 35.0% | |
| ATATAGTTCCACATGTGACA+AGG | + | chr7_4:48679287-48679306 | Msa1159090:intron | 35.0% | |
| TATATAGTCCTTGTCACATG+TGG | - | chr7_4:48679298-48679317 | None:intergenic | 35.0% | |
| !!! | CGATGTTTTGGTTTTAGTCT+TGG | - | chr7_4:48679333-48679352 | None:intergenic | 35.0% |
| CTTGTATGTTTCTTTCAGAG+CGG | + | chr7_4:48679679-48679698 | Msa1159090:intron | 35.0% | |
| AGAAAATGCTTTCCAAGCTT+AGG | + | chr7_4:48679943-48679962 | Msa1159090:three_prime_UTR | 35.0% | |
| GAAAATGCTTTCCAAGCTTA+GGG | + | chr7_4:48679944-48679963 | Msa1159090:three_prime_UTR | 35.0% | |
| TTGTGGGTAGGTTCAGAATA+AGG | - | chr7_4:48673609-48673628 | None:intergenic | 40.0% | |
| !! | TGTTTTTCTTTGATGGGTGG+TGG | + | chr7_4:48673757-48673776 | Msa1159090:exon | 40.0% |
| GTGTTTCACAAAAGGGTTCA+TGG | + | chr7_4:48673779-48673798 | Msa1159090:CDS | 40.0% | |
| TTTCACAAAAGGGTTCATGG+AGG | + | chr7_4:48673782-48673801 | Msa1159090:CDS | 40.0% | |
| ! | CATGGAGGTTTTTCACTAGA+AGG | + | chr7_4:48673797-48673816 | Msa1159090:CDS | 40.0% |
| ! | GTTTTTCACTAGAAGGAAGC+AGG | + | chr7_4:48673804-48673823 | Msa1159090:CDS | 40.0% |
| !!! | AGAGGCTTAGTGTTTTGACT+TGG | - | chr7_4:48673838-48673857 | None:intergenic | 40.0% |
| GATAACGCTTTAGCAAGAAG+AGG | - | chr7_4:48673856-48673875 | None:intergenic | 40.0% | |
| AAGAGACGATGTTTGGACTT+TGG | + | chr7_4:48674048-48674067 | Msa1159090:intron | 40.0% | |
| ! | AAACAGATACGGTGTCAGAT+AGG | + | chr7_4:48674163-48674182 | Msa1159090:intron | 40.0% |
| CCTATCACTAAGCAAAAGGT+GGG | - | chr7_4:48674282-48674301 | None:intergenic | 40.0% | |
| TCCTATCACTAAGCAAAAGG+TGG | - | chr7_4:48674283-48674302 | None:intergenic | 40.0% | |
| !! | CTAGGTGTTGGTTCAACAAT+TGG | + | chr7_4:48674412-48674431 | Msa1159090:intron | 40.0% |
| TCACGTAGATGTGTTCAAAC+AGG | - | chr7_4:48674915-48674934 | None:intergenic | 40.0% | |
| ! | GAGGGTGGAGATTTTCTATT+TGG | + | chr7_4:48675095-48675114 | Msa1159090:intron | 40.0% |
| !! | TTCAGTGTTGCTTGGTTGAT+CGG | + | chr7_4:48675147-48675166 | Msa1159090:intron | 40.0% |
| GTACTGGAATATACGATTGG+TGG | + | chr7_4:48675180-48675199 | Msa1159090:CDS | 40.0% | |
| TTGTCTAGACCACCAAAAAG+TGG | - | chr7_4:48675531-48675550 | None:intergenic | 40.0% | |
| TATCAATCCCAGGAATATGC+TGG | - | chr7_4:48675575-48675594 | None:intergenic | 40.0% | |
| ACTCTTATGTTTGGGGATCA+AGG | + | chr7_4:48675641-48675660 | Msa1159090:CDS | 40.0% | |
| AGAGCAAATATGTGCAAAGG+AGG | - | chr7_4:48675764-48675783 | None:intergenic | 40.0% | |
| AACTCCCAGAACAAAACAGT+TGG | - | chr7_4:48675813-48675832 | None:intergenic | 40.0% | |
| ! | CTTTTTGTGATTGTTGCTGG+TGG | + | chr7_4:48675912-48675931 | Msa1159090:CDS | 40.0% |
| ATTGTTGCTGGTGGTTACAT+GGG | + | chr7_4:48675921-48675940 | Msa1159090:CDS | 40.0% | |
| !!! | ATTTTCCCTTTGGAGTTGAC+GGG | + | chr7_4:48676071-48676090 | Msa1159090:CDS | 40.0% |
| CTTACCGTAACTTATGTGTG+TGG | + | chr7_4:48676337-48676356 | Msa1159090:intron | 40.0% | |
| AGAGCCACACACATAAGTTA+CGG | - | chr7_4:48676344-48676363 | None:intergenic | 40.0% | |
| GTGTTGTGGAATGTATATGC+TGG | + | chr7_4:48676561-48676580 | Msa1159090:CDS | 40.0% | |
| TCGGAAAATGCAGAGGATAT+GGG | - | chr7_4:48676640-48676659 | None:intergenic | 40.0% | |
| GGCAGCTACATTATAAATGC+TGG | + | chr7_4:48676761-48676780 | Msa1159090:intron | 40.0% | |
| TACTTCCCCAGGTAGATTAA+TGG | + | chr7_4:48676822-48676841 | Msa1159090:intron | 40.0% | |
| GGTATCCATTAATCTACCTG+GGG | - | chr7_4:48676830-48676849 | None:intergenic | 40.0% | |
| ! | GAGGTATCCATTAATCTACC+TGG | - | chr7_4:48676832-48676851 | None:intergenic | 40.0% |
| !! | GAATTTTGATGGCAATGGCA+AGG | + | chr7_4:48677303-48677322 | Msa1159090:CDS | 40.0% |
| GTAATTATTGTGCCCTTGAC+AGG | - | chr7_4:48677380-48677399 | None:intergenic | 40.0% | |
| ! | GTCAAGGGCACAATAATTAC+TGG | + | chr7_4:48677380-48677399 | Msa1159090:CDS | 40.0% |
| CATGAGAACATGCTCTTTCA+TGG | - | chr7_4:48677496-48677515 | None:intergenic | 40.0% | |
| ! | TCTTTTAGCATTCACCATGG+TGG | + | chr7_4:48677617-48677636 | Msa1159090:CDS | 40.0% |
| ACAATTGAATCCTGGAGAGA+AGG | - | chr7_4:48677696-48677715 | None:intergenic | 40.0% | |
| CAATCTCGCGTAACATCTAA+AGG | - | chr7_4:48677774-48677793 | None:intergenic | 40.0% | |
| ! | ACTCACAGTTGTCTTTGGAA+CGG | - | chr7_4:48677827-48677846 | None:intergenic | 40.0% |
| ATAGAAGAAGAGTTGTTGGG+TGG | + | chr7_4:48678107-48678126 | Msa1159090:CDS | 40.0% | |
| ACCATAGCGATCATATGCTT+AGG | + | chr7_4:48678130-48678149 | Msa1159090:CDS | 40.0% | |
| CCATAGCGATCATATGCTTA+GGG | + | chr7_4:48678131-48678150 | Msa1159090:CDS | 40.0% | |
| CATAGCGATCATATGCTTAG+GGG | + | chr7_4:48678132-48678151 | Msa1159090:CDS | 40.0% | |
| AACATGAAGCTGCATATGTG+AGG | - | chr7_4:48678165-48678184 | None:intergenic | 40.0% | |
| ! | TTTTCTCAAACTGCACTTGC+AGG | + | chr7_4:48678224-48678243 | Msa1159090:intron | 40.0% |
| TTTCTCAAACTGCACTTGCA+GGG | + | chr7_4:48678225-48678244 | Msa1159090:intron | 40.0% | |
| ATTCGTCTTCCTAACCTGTA+TGG | + | chr7_4:48678390-48678409 | Msa1159090:CDS | 40.0% | |
| CATCTTGATCCATACAGGTT+AGG | - | chr7_4:48678402-48678421 | None:intergenic | 40.0% | |
| TGCATCATCTTGATCCATAC+AGG | - | chr7_4:48678407-48678426 | None:intergenic | 40.0% | |
| GTATGGATCAAGATGATGCA+AGG | + | chr7_4:48678407-48678426 | Msa1159090:CDS | 40.0% | |
| CAACATGTCATCTACATCAG+CGG | - | chr7_4:48678817-48678836 | None:intergenic | 40.0% | |
| GGACATATGAAACCTGCAAA+TGG | - | chr7_4:48678947-48678966 | None:intergenic | 40.0% | |
| TTGATGAGAATGCAAGCTAC+AGG | - | chr7_4:48678986-48679005 | None:intergenic | 40.0% | |
| TTTCTTTCAGAGCGGAAACA+TGG | + | chr7_4:48679687-48679706 | Msa1159090:intron | 40.0% | |
| CTTTCGTCAACTTGACTTAC+TGG | - | chr7_4:48679803-48679822 | None:intergenic | 40.0% | |
| TTCTAAGCAACATGGCTTCT+GGG | - | chr7_4:48679836-48679855 | None:intergenic | 40.0% | |
| TTTCTAAGCAACATGGCTTC+TGG | - | chr7_4:48679837-48679856 | None:intergenic | 40.0% | |
| CTATAGAACTTAGTGCGTAG+AGG | + | chr7_4:48679859-48679878 | Msa1159090:three_prime_UTR | 40.0% | |
| TGGGTAGGTTCAGAATAAGG+AGG | - | chr7_4:48673606-48673625 | None:intergenic | 45.0% | |
| ! | GGTGGTGGTGTTTCACAAAA+GGG | + | chr7_4:48673772-48673791 | Msa1159090:CDS | 45.0% |
| ! | CCCACCTTTTGCTTAGTGAT+AGG | + | chr7_4:48674279-48674298 | Msa1159090:intron | 45.0% |
| ! | GTTGGTTCAACAATTGGTGC+TGG | + | chr7_4:48674418-48674437 | Msa1159090:CDS | 45.0% |
| !! | TGGTGCTGGAGTGTATGTTT+TGG | + | chr7_4:48674432-48674451 | Msa1159090:CDS | 45.0% |
| !!! | GCTGGAGTGTATGTTTTGGT+TGG | + | chr7_4:48674436-48674455 | Msa1159090:CDS | 45.0% |
| !! | ACAGTAGCTAGAGAGCATTC+TGG | + | chr7_4:48674460-48674479 | Msa1159090:CDS | 45.0% |
| ! | AGAGCATTCTGGACCATCTT+TGG | + | chr7_4:48674471-48674490 | Msa1159090:CDS | 45.0% |
| TCCTCGTGCTCATTATATGG+TGG | + | chr7_4:48675025-48675044 | Msa1159090:intron | 45.0% | |
| ACCACCATATAATGAGCACG+AGG | - | chr7_4:48675029-48675048 | None:intergenic | 45.0% | |
| !!! | GTATAGGCTCCACTTTTTGG+TGG | + | chr7_4:48675519-48675538 | Msa1159090:intron | 45.0% |
| TCCTGGGATTGATATTGTCG+TGG | + | chr7_4:48675581-48675600 | Msa1159090:CDS | 45.0% | |
| TCCACGACAATATCAATCCC+AGG | - | chr7_4:48675585-48675604 | None:intergenic | 45.0% | |
| CTTATGTTTGGGGATCAAGG+AGG | + | chr7_4:48675644-48675663 | Msa1159090:CDS | 45.0% | |
| TACATACATGCAGAGCACAG+TGG | + | chr7_4:48675851-48675870 | Msa1159090:intron | 45.0% | |
| GATTGTTGCTGGTGGTTACA+TGG | + | chr7_4:48675920-48675939 | Msa1159090:CDS | 45.0% | |
| GGTTACATGGGATTCAAGTC+TGG | + | chr7_4:48675933-48675952 | Msa1159090:CDS | 45.0% | |
| ACATGGGATTCAAGTCTGGA+TGG | + | chr7_4:48675937-48675956 | Msa1159090:CDS | 45.0% | |
| CATGGGATTCAAGTCTGGAT+GGG | + | chr7_4:48675938-48675957 | Msa1159090:CDS | 45.0% | |
| CGGGATATGAACTTCCTACT+GGG | + | chr7_4:48675961-48675980 | Msa1159090:CDS | 45.0% | |
| GGCCAAACCAAACATGTATG+TGG | - | chr7_4:48676012-48676031 | None:intergenic | 45.0% | |
| AGGAAAGGAAACTGCACTCA+TGG | - | chr7_4:48676316-48676335 | None:intergenic | 45.0% | |
| !! | GCTTCACTGTTTCTGTGTTG+TGG | + | chr7_4:48676547-48676566 | Msa1159090:CDS | 45.0% |
| ! | TATGCTGGTCTCTGTTGTTG+TGG | + | chr7_4:48676576-48676595 | Msa1159090:CDS | 45.0% |
| GGAAAATGCAGAGGATATGG+GGG | - | chr7_4:48676638-48676657 | None:intergenic | 45.0% | |
| CGGAAAATGCAGAGGATATG+GGG | - | chr7_4:48676639-48676658 | None:intergenic | 45.0% | |
| GTCGGAAAATGCAGAGGATA+TGG | - | chr7_4:48676641-48676660 | None:intergenic | 45.0% | |
| ! | TTCGCAGCCACGAATTTTGA+TGG | + | chr7_4:48677292-48677311 | Msa1159090:intron | 45.0% |
| !! | GCCACGAATTTTGATGGCAA+TGG | + | chr7_4:48677298-48677317 | Msa1159090:intron | 45.0% |
| GCCATTGCCATCAAAATTCG+TGG | - | chr7_4:48677302-48677321 | None:intergenic | 45.0% | |
| ! | CACACTCTAGTTCCTGTCAA+GGG | + | chr7_4:48677365-48677384 | Msa1159090:CDS | 45.0% |
| ATGGAAGTCTCTGATCTTGC+AGG | + | chr7_4:48677431-48677450 | Msa1159090:CDS | 45.0% | |
| TGGAAGTCTCTGATCTTGCA+GGG | + | chr7_4:48677432-48677451 | Msa1159090:CDS | 45.0% | |
| ! | TTTTCTACTGCAGGTCAGTG+TGG | + | chr7_4:48677590-48677609 | Msa1159090:intron | 45.0% |
| TTTCTACTGCAGGTCAGTGT+GGG | + | chr7_4:48677591-48677610 | Msa1159090:intron | 45.0% | |
| ATTGAATCCTGGAGAGAAGG+AGG | - | chr7_4:48677693-48677712 | None:intergenic | 45.0% | |
| CCCTAAGCATATGATCGCTA+TGG | - | chr7_4:48678134-48678153 | None:intergenic | 45.0% | |
| CAATGCAAAGCGAACAGAAC+TGG | - | chr7_4:48678338-48678357 | None:intergenic | 45.0% | |
| TCTGTTCGCTTTGCATTGTG+TGG | + | chr7_4:48678340-48678359 | Msa1159090:CDS | 45.0% | |
| TTTGCATTGTGTGGAGTTGG+AGG | + | chr7_4:48678349-48678368 | Msa1159090:CDS | 45.0% | |
| GATGATGCAAGGCACAACTT+TGG | + | chr7_4:48678418-48678437 | Msa1159090:CDS | 45.0% | |
| GACGTAAAACCTTGTGAGAC+TGG | + | chr7_4:48678542-48678561 | Msa1159090:intron | 45.0% | |
| TCTCTTCAACCAGTCTCACA+AGG | - | chr7_4:48678554-48678573 | None:intergenic | 45.0% | |
| ! | GACTGGTTGAAGAGAGCTTA+TGG | + | chr7_4:48678559-48678578 | Msa1159090:intron | 45.0% |
| ATTAGGACCCTAGTGTGAGT+AGG | + | chr7_4:48678777-48678796 | Msa1159090:intron | 45.0% | |
| ACAGGAAGCAGTGGAACAAA+TGG | - | chr7_4:48678968-48678987 | None:intergenic | 45.0% | |
| ! | CATGGTTGCGTGTTTCTGTA+TGG | + | chr7_4:48679705-48679724 | Msa1159090:CDS | 45.0% |
| ! | GTTGCGTGTTTCTGTATGGT+TGG | + | chr7_4:48679709-48679728 | Msa1159090:CDS | 45.0% |
| GTTTCTGTATGGTTGGCAAC+AGG | + | chr7_4:48679716-48679735 | Msa1159090:CDS | 45.0% | |
| CAAATATAGGGCCCTAAGCT+TGG | - | chr7_4:48679958-48679977 | None:intergenic | 45.0% | |
| AGGTGACAGTACTTGTGTAC+TGG | + | chr7_4:48680080-48680099 | Msa1159090:three_prime_UTR | 45.0% | |
| ! | GACAGTACTTGTGTACTGGT+TGG | + | chr7_4:48680084-48680103 | Msa1159090:three_prime_UTR | 45.0% |
| !! | TTTAAGAAAAAAATATTATA+AGG | + | chr7_4:48679456-48679475 | Msa1159090:intron | 5.0% |
| ! | GGGTGGTGGTGTTTCACAAA+AGG | + | chr7_4:48673771-48673790 | Msa1159090:CDS | 50.0% |
| !! | CTGATTGCTGGATTAGCAGC+TGG | + | chr7_4:48674505-48674524 | Msa1159090:CDS | 50.0% |
| CTTGTAGATGCCCTTCTGCT+GGG | + | chr7_4:48674557-48674576 | Msa1159090:CDS | 50.0% | |
| GATATGCACTCCCAGCAGAA+GGG | - | chr7_4:48674570-48674589 | None:intergenic | 50.0% | |
| TGATATGCACTCCCAGCAGA+AGG | - | chr7_4:48674571-48674590 | None:intergenic | 50.0% | |
| ! | TGTTGCTTGGTTGATCGGCT+GGG | + | chr7_4:48675152-48675171 | Msa1159090:CDS | 50.0% |
| TGCTGGCGTGCCAAAAAGAA+CGG | - | chr7_4:48675558-48675577 | None:intergenic | 50.0% | |
| ! | GGACCCATGTGCAGCAATTT+TGG | + | chr7_4:48675602-48675621 | Msa1159090:CDS | 50.0% |
| ATGCAGAGCACAGTGGTACA+AGG | + | chr7_4:48675858-48675877 | Msa1159090:intron | 50.0% | |
| GCGGGATATGAACTTCCTAC+TGG | + | chr7_4:48675960-48675979 | Msa1159090:CDS | 50.0% | |
| AGCATCCCGTCAACTCCAAA+GGG | - | chr7_4:48676079-48676098 | None:intergenic | 50.0% | |
| AAGCATCCCGTCAACTCCAA+AGG | - | chr7_4:48676080-48676099 | None:intergenic | 50.0% | |
| CTATACCTCTTCAGCAGTGC+TGG | - | chr7_4:48676152-48676171 | None:intergenic | 50.0% | |
| CCTAGTGGCAAATCTCGTTG+AGG | - | chr7_4:48676520-48676539 | None:intergenic | 50.0% | |
| CCTCAACGAGATTTGCCACT+AGG | + | chr7_4:48676517-48676536 | Msa1159090:CDS | 50.0% | |
| CGAGATTTGCCACTAGGCAT+TGG | + | chr7_4:48676523-48676542 | Msa1159090:CDS | 50.0% | |
| ! | AGTGAAGCACCAATGCCTAG+TGG | - | chr7_4:48676535-48676554 | None:intergenic | 50.0% |
| CTGGTCTCTGTTGTTGTGGT+TGG | + | chr7_4:48676580-48676599 | Msa1159090:CDS | 50.0% | |
| ! | TCCTCTGCATTTTCCGACCA+TGG | + | chr7_4:48676643-48676662 | Msa1159090:CDS | 50.0% |
| ! | CCTCTGCATTTTCCGACCAT+GGG | + | chr7_4:48676644-48676663 | Msa1159090:CDS | 50.0% |
| TTTCCGACCATGGGATGCAA+TGG | + | chr7_4:48676653-48676672 | Msa1159090:CDS | 50.0% | |
| TTCCGACCATGGGATGCAAT+GGG | + | chr7_4:48676654-48676673 | Msa1159090:CDS | 50.0% | |
| ! | TTGATGGCAATGGCAAGGGA+TGG | + | chr7_4:48677308-48677327 | Msa1159090:CDS | 50.0% |
| ! | GCACACTCTAGTTCCTGTCA+AGG | + | chr7_4:48677364-48677383 | Msa1159090:CDS | 50.0% |
| ATGCTAAGACTGCAGCAGCT+AGG | - | chr7_4:48677406-48677425 | None:intergenic | 50.0% | |
| AGTCTCTGATCTTGCAGGGA+TGG | + | chr7_4:48677436-48677455 | Msa1159090:CDS | 50.0% | |
| CAGCACAGATATTGCCACCA+TGG | - | chr7_4:48677634-48677653 | None:intergenic | 50.0% | |
| ! | GGCACTGGGACTTTATTTGG+AGG | - | chr7_4:48677672-48677691 | None:intergenic | 50.0% |
| !! | GGAGGCACTGGGACTTTATT+TGG | - | chr7_4:48677675-48677694 | None:intergenic | 50.0% |
| CGCTTTGCATTGTGTGGAGT+TGG | + | chr7_4:48678346-48678365 | Msa1159090:CDS | 50.0% | |
| !! | GGAGGCACTCTACTTGTTTC+TGG | + | chr7_4:48678367-48678386 | Msa1159090:CDS | 50.0% |
| AGGCACAACTTTGGTCACTC+TGG | + | chr7_4:48678427-48678446 | Msa1159090:CDS | 50.0% | |
| CACAACTTTGGTCACTCTGG+AGG | + | chr7_4:48678430-48678449 | Msa1159090:CDS | 50.0% | |
| TGATGCGCCTACTCACACTA+GGG | - | chr7_4:48678787-48678806 | None:intergenic | 50.0% | |
| ATGATGCGCCTACTCACACT+AGG | - | chr7_4:48678788-48678807 | None:intergenic | 50.0% | |
| TGTCATCTACATCAGCGGCT+AGG | - | chr7_4:48678812-48678831 | None:intergenic | 50.0% | |
| ATGCAAGCTACAGGAAGCAG+TGG | - | chr7_4:48678977-48678996 | None:intergenic | 50.0% | |
| TAAGCAACATGGCTTCTGGG+AGG | - | chr7_4:48679833-48679852 | None:intergenic | 50.0% | |
| GCTTGTAGATGCCCTTCTGC+TGG | + | chr7_4:48674556-48674575 | Msa1159090:CDS | 55.0% | |
| !! | GTGTTGCTTGGTTGATCGGC+TGG | + | chr7_4:48675151-48675170 | Msa1159090:intron | 55.0% |
| TTGGCACGCCAGCATATTCC+TGG | + | chr7_4:48675564-48675583 | Msa1159090:CDS | 55.0% | |
| TGGCACGCCAGCATATTCCT+GGG | + | chr7_4:48675565-48675584 | Msa1159090:CDS | 55.0% | |
| GGGATTCAAGTCTGGATGGG+CGG | + | chr7_4:48675941-48675960 | Msa1159090:CDS | 55.0% | |
| GGATTCAAGTCTGGATGGGC+GGG | + | chr7_4:48675942-48675961 | Msa1159090:CDS | 55.0% | |
| AGTTGCCAGCACTGCTGAAG+AGG | + | chr7_4:48676144-48676163 | Msa1159090:CDS | 55.0% | |
| !! | GCAGAGGATATGGGGGTATC+AGG | - | chr7_4:48676631-48676650 | None:intergenic | 55.0% |
| CCCATGGTCGGAAAATGCAG+AGG | - | chr7_4:48676647-48676666 | None:intergenic | 55.0% | |
| ! | AGCTCTCTGCTCAGCGTTGA+TGG | + | chr7_4:48676793-48676812 | Msa1159090:CDS | 55.0% |
| !! | GCTCTCTGCTCAGCGTTGAT+GGG | + | chr7_4:48676794-48676813 | Msa1159090:CDS | 55.0% |
| !! | TCTGCTCAGCGTTGATGGGT+GGG | + | chr7_4:48676798-48676817 | Msa1159090:CDS | 55.0% |
| TTGGTTGATCGGCTGGGCCT+TGG | + | chr7_4:48675158-48675177 | Msa1159090:CDS | 60.0% | |
| GGAGTTGACGGGATGCTTGC+TGG | + | chr7_4:48676082-48676101 | Msa1159090:CDS | 60.0% | |
| GGCCCATTGCATCCCATGGT+CGG | - | chr7_4:48676659-48676678 | None:intergenic | 60.0% | |
| !! | CTCTGCTCAGCGTTGATGGG+TGG | + | chr7_4:48676797-48676816 | Msa1159090:CDS | 60.0% |
| GATGGGTGGGATACTTCCCC+AGG | + | chr7_4:48676811-48676830 | Msa1159090:CDS | 60.0% | |
| !! | CCTGGAGAGAAGGAGGCACT+GGG | - | chr7_4:48677686-48677705 | None:intergenic | 60.0% |
| ! | TCCTGGAGAGAAGGAGGCAC+TGG | - | chr7_4:48677687-48677706 | None:intergenic | 60.0% |
| GATCGGCTGGGCCTTGGTAC+TGG | + | chr7_4:48675164-48675183 | Msa1159090:CDS | 65.0% | |
| ACGCGGCCCATTGCATCCCA+TGG | - | chr7_4:48676663-48676682 | None:intergenic | 65.0% | |
| CCCAGTGCCTCCTTCTCTCC+AGG | + | chr7_4:48677683-48677702 | Msa1159090:CDS | 65.0% | |
| GGTGGCGCTGCTGTTGCTCG+TGG | + | chr7_4:48675198-48675217 | Msa1159090:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48673544 | 48680184 | 48673544 | ID=Msa1159090;Name=Msa1159090 |
| chr7_4 | mRNA | 48673544 | 48680184 | 48673544 | ID=Msa1159090-mRNA-1;Parent=Msa1159090;Name=Msa1159090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=225|0.92|0.92|1|1|1|14|331|633 |
| chr7_4 | exon | 48673544 | 48673898 | 48673544 | ID=Msa1159090-mRNA-1:exon:13187;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48674416 | 48674617 | 48674416 | ID=Msa1159090-mRNA-1:exon:13188;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48675152 | 48675236 | 48675152 | ID=Msa1159090-mRNA-1:exon:13189;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48675525 | 48675665 | 48675525 | ID=Msa1159090-mRNA-1:exon:13190;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48675864 | 48675982 | 48675864 | ID=Msa1159090-mRNA-1:exon:13191;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48676069 | 48676165 | 48676069 | ID=Msa1159090-mRNA-1:exon:13192;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48676460 | 48676680 | 48676460 | ID=Msa1159090-mRNA-1:exon:13193;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48676766 | 48676832 | 48676766 | ID=Msa1159090-mRNA-1:exon:13194;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48677299 | 48677457 | 48677299 | ID=Msa1159090-mRNA-1:exon:13195;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48677603 | 48677840 | 48677603 | ID=Msa1159090-mRNA-1:exon:13196;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48678101 | 48678197 | 48678101 | ID=Msa1159090-mRNA-1:exon:13197;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48678339 | 48678451 | 48678339 | ID=Msa1159090-mRNA-1:exon:13198;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48678954 | 48679029 | 48678954 | ID=Msa1159090-mRNA-1:exon:13199;Parent=Msa1159090-mRNA-1 |
| chr7_4 | exon | 48679697 | 48680184 | 48679697 | ID=Msa1159090-mRNA-1:exon:13200;Parent=Msa1159090-mRNA-1 |
| chr7_4 | five_prime_UTR | 48673544 | 48673768 | 48673544 | ID=Msa1159090-mRNA-1:five_prime_utr;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48673769 | 48673898 | 48673769 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48674416 | 48674617 | 48674416 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48675152 | 48675236 | 48675152 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48675525 | 48675665 | 48675525 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48675864 | 48675982 | 48675864 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48676069 | 48676165 | 48676069 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48676460 | 48676680 | 48676460 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48676766 | 48676832 | 48676766 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48677299 | 48677457 | 48677299 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48677603 | 48677840 | 48677603 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48678101 | 48678197 | 48678101 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48678339 | 48678451 | 48678339 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48678954 | 48679029 | 48678954 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | CDS | 48679697 | 48679853 | 48679697 | ID=Msa1159090-mRNA-1:cds;Parent=Msa1159090-mRNA-1 |
| chr7_4 | three_prime_UTR | 48679854 | 48680184 | 48679854 | ID=Msa1159090-mRNA-1:three_prime_utr;Parent=Msa1159090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
