Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120230 | KEH23478.1 | 90.352 | 653 | 9 | 2 | 4 | 634 | 3 | 623 | 0.0 | 1115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120230 | sp|O22799|Y2349_ARATH | 42.857 | 665 | 264 | 19 | 1 | 616 | 1 | 598 | 1.73e-131 | 403 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120230 | A0A072U2W0 | 90.352 | 653 | 9 | 2 | 4 | 634 | 3 | 623 | 0.0 | 1115 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1030570 | Msa1120230 | 0.848884 | 4.610734e-60 | -8.615850e-47 |
| Msa1069660 | Msa1120230 | 0.825583 | 4.331407e-54 | -8.615850e-47 |
| Msa1120230 | Msa1157420 | 0.804812 | 1.804752e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120230 | MtrunA17_Chr7g0251611 | 90.337 | 652 | 9 | 2 | 4 | 633 | 3 | 622 | 0.0 | 1114 |
| Msa1120230 | MtrunA17_Chr7g0214111 | 46.477 | 667 | 251 | 17 | 1 | 604 | 1 | 624 | 8.05e-151 | 450 |
| Msa1120230 | MtrunA17_Chr2g0311851 | 82.353 | 51 | 9 | 0 | 143 | 193 | 1 | 51 | 3.04e-19 | 83.2 |
| Msa1120230 | MtrunA17_Chr5g0421231 | 68.519 | 54 | 17 | 0 | 143 | 196 | 1 | 54 | 4.22e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120230 | AT2G33490.2 | 42.857 | 665 | 264 | 19 | 1 | 616 | 1 | 598 | 1.76e-132 | 403 |
| Msa1120230 | AT2G33490.1 | 42.857 | 665 | 264 | 19 | 1 | 616 | 1 | 598 | 1.76e-132 | 403 |
| Msa1120230 | AT2G33490.3 | 42.857 | 665 | 264 | 19 | 1 | 616 | 1 | 598 | 1.93e-132 | 403 |
| Msa1120230 | AT3G26910.3 | 39.831 | 708 | 273 | 26 | 1 | 645 | 1 | 618 | 7.14e-114 | 355 |
| Msa1120230 | AT3G26910.1 | 40.172 | 697 | 264 | 26 | 1 | 634 | 1 | 607 | 2.72e-112 | 350 |
| Msa1120230 | AT3G26910.2 | 40.172 | 697 | 264 | 26 | 1 | 634 | 1 | 607 | 3.69e-112 | 350 |
| Msa1120230 | AT5G41100.2 | 39.855 | 690 | 260 | 25 | 1 | 647 | 2 | 579 | 1.68e-109 | 342 |
| Msa1120230 | AT5G41100.1 | 40.059 | 679 | 252 | 25 | 1 | 636 | 2 | 568 | 3.72e-109 | 342 |
| Msa1120230 | AT2G33490.4 | 42.596 | 493 | 222 | 15 | 151 | 616 | 7 | 465 | 4.61e-89 | 286 |
Find 145 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCGACGGACGTGGTAAC+TGG | 0.140407 | 7_3:-69503339 | None:intergenic |
| ACTCTCTTCATCATCATTTA+AGG | 0.145979 | 7_3:-69499589 | None:intergenic |
| TACGTGACTGGCCTTGTTTC+AGG | 0.166849 | 7_3:-69501944 | None:intergenic |
| ACTCTGCTCCTTTGGGATTA+AGG | 0.200200 | 7_3:+69503641 | Msa1120230:CDS |
| AAGAGAAAGAGAAATGTAAA+TGG | 0.232828 | 7_3:-69497572 | None:intergenic |
| GTTAAGCGAGGACTTCATTT+TGG | 0.243864 | 7_3:-69497708 | None:intergenic |
| ATTGCCCAACAGAAAGAAAA+AGG | 0.251587 | 7_3:+69501816 | Msa1120230:CDS |
| ATTCTTCAGAGTGTTGATTA+TGG | 0.288018 | 7_3:-69497631 | None:intergenic |
| AGTAGGTCACTCTGCTCCTT+TGG | 0.313900 | 7_3:+69503633 | Msa1120230:CDS |
| TTGTCTGTAAAACCTGTCTC+TGG | 0.315486 | 7_3:+69503457 | Msa1120230:CDS |
| CAACAGTTGTCTTACTTTCT+CGG | 0.320793 | 7_3:-69503086 | None:intergenic |
| GAAGCACCAGGAGATGCTTT+TGG | 0.323518 | 7_3:-69503517 | None:intergenic |
| GCCTTGCTGGTTTGATTAGC+AGG | 0.323872 | 7_3:-69503595 | None:intergenic |
| CGCTCGCCACCATGCTGCTC+AGG | 0.334835 | 7_3:+69501983 | Msa1120230:CDS |
| CAGATAGAGCTGATGCTCTC+TGG | 0.346317 | 7_3:-69503879 | None:intergenic |
| CTGATCCTAAGAAAATAAAA+AGG | 0.360940 | 7_3:+69503401 | Msa1120230:CDS |
| GACCTTCAGAAACTTGTTGA+TGG | 0.361181 | 7_3:+69499758 | Msa1120230:CDS |
| TTCGGAGTCACTGCAAGAAA+TGG | 0.362580 | 7_3:+69499542 | Msa1120230:CDS |
| GAAAACAAGTAGCTAAATTT+CGG | 0.368391 | 7_3:-69503980 | None:intergenic |
| TTATTAGTTGTAGGATGCTC+TGG | 0.371727 | 7_3:-69503667 | None:intergenic |
| TTTGTGGCATTCATCTCCTT+TGG | 0.375192 | 7_3:+69503213 | Msa1120230:CDS |
| GCTGATGCTCTCTGGGATAA+AGG | 0.375335 | 7_3:-69503871 | None:intergenic |
| AGTTGTCTTACTTTCTCGGC+TGG | 0.375726 | 7_3:-69503082 | None:intergenic |
| GTAGGTCACTCTGCTCCTTT+GGG | 0.377624 | 7_3:+69503634 | Msa1120230:CDS |
| GTTTCTACCTCTGCTGAGTT+TGG | 0.379005 | 7_3:-69502325 | None:intergenic |
| CATCTTCAAGGCCACTGAAT+TGG | 0.393461 | 7_3:-69502192 | None:intergenic |
| ACTGTATGCAGGTAAAGTTT+TGG | 0.402064 | 7_3:+69499712 | Msa1120230:intron |
| CTCAGTGTCGTTTCATAGCT+AGG | 0.407532 | 7_3:+69497681 | Msa1120230:five_prime_UTR |
| AGAGAAAGAGAAATGTAAAT+GGG | 0.408541 | 7_3:-69497571 | None:intergenic |
| GGTGGCGAGCGGCTTGTGTT+AGG | 0.410078 | 7_3:-69501971 | None:intergenic |
| CTTCACCATCATCATCTTCA+AGG | 0.415415 | 7_3:-69502204 | None:intergenic |
| ACGTGACTGGCCTTGTTTCA+GGG | 0.423876 | 7_3:-69501943 | None:intergenic |
| GGAGAGGAAGGTTGGGGTAT+CGG | 0.425718 | 7_3:-69503496 | None:intergenic |
| GGAGGAAATTTATTAGTTGT+AGG | 0.427311 | 7_3:-69503676 | None:intergenic |
| TTTGTTTCTTTGATGTTGAC+AGG | 0.430714 | 7_3:-69503151 | None:intergenic |
| CCAGTGATTTAAGTCCCTTC+CGG | 0.430935 | 7_3:-69502117 | None:intergenic |
| AAAGGAAGTACATAAGCATT+AGG | 0.431746 | 7_3:-69503127 | None:intergenic |
| CTCTGGGATAAAGGTGTTAG+TGG | 0.435867 | 7_3:-69503862 | None:intergenic |
| AGAAATGGGTACTTGTCTAT+TGG | 0.445293 | 7_3:+69499557 | Msa1120230:CDS |
| GTGCATCTTCACATGATTTG+TGG | 0.445875 | 7_3:+69503197 | Msa1120230:CDS |
| AGACTCCGATGGTCTGGTTA+TGG | 0.446952 | 7_3:-69499900 | None:intergenic |
| GCTGAATAGCTGCTGACTCT+TGG | 0.450645 | 7_3:-69503031 | None:intergenic |
| GTGATGGGTGGAGTTGGAAG+TGG | 0.455552 | 7_3:-69503721 | None:intergenic |
| TCTTTGATGTTGACAGGTAA+AGG | 0.460642 | 7_3:-69503145 | None:intergenic |
| CCTTGCTGGTTTGATTAGCA+GGG | 0.462255 | 7_3:-69503594 | None:intergenic |
| AAGAAGAGACTCCGATGGTC+TGG | 0.465966 | 7_3:-69499906 | None:intergenic |
| AGGCCGTTGAGCCACATGTT+AGG | 0.471181 | 7_3:+69502140 | Msa1120230:CDS |
| CTTTGAGAATAGAGACTCTA+GGG | 0.472707 | 7_3:-69503291 | None:intergenic |
| TGTCTGTAAAACCTGTCTCT+GGG | 0.473932 | 7_3:+69503458 | Msa1120230:CDS |
| TGTTGATTATGGTCAAAGAA+AGG | 0.474277 | 7_3:-69497620 | None:intergenic |
| AAAACTCAACTCGCCGCCTT+CGG | 0.474937 | 7_3:-69502269 | None:intergenic |
| AAATATAGTTGAATTTCTTC+CGG | 0.476214 | 7_3:+69502098 | Msa1120230:intron |
| TACTCACCAAATTCCAGAAA+AGG | 0.476606 | 7_3:+69503819 | Msa1120230:CDS |
| TCGGAGTCACTGCAAGAAAT+GGG | 0.477885 | 7_3:+69499543 | Msa1120230:CDS |
| GATGCTGAACTTGATACAAC+CGG | 0.480386 | 7_3:-69503697 | None:intergenic |
| TGAACTCGCTCTCGCTGCTA+AGG | 0.481417 | 7_3:+69497805 | Msa1120230:CDS |
| TACAACTAATAAATTTCCTC+CGG | 0.483430 | 7_3:+69503678 | Msa1120230:CDS |
| CTCTGCTGAGTTTGGCGATG+TGG | 0.485271 | 7_3:-69502317 | None:intergenic |
| TCCTCTCCAAAAGCATCTCC+TGG | 0.485455 | 7_3:+69503511 | Msa1120230:CDS |
| TCTTTGAGAATAGAGACTCT+AGG | 0.494289 | 7_3:-69503292 | None:intergenic |
| TCTGCTGAGTTTGGCGATGT+GGG | 0.496130 | 7_3:-69502316 | None:intergenic |
| GACAATGGCTTATTAGTCAA+TGG | 0.497368 | 7_3:-69503439 | None:intergenic |
| AGCGAGTTCATCGAACTTAA+CGG | 0.498592 | 7_3:-69497792 | None:intergenic |
| AGATAGAGCTGATGCTCTCT+GGG | 0.499905 | 7_3:-69503878 | None:intergenic |
| TCATGTAGTTCACTTATCCT+AGG | 0.507273 | 7_3:-69503559 | None:intergenic |
| GAGACGGTGATGGGTGGAGT+TGG | 0.511618 | 7_3:-69503727 | None:intergenic |
| CGGTTAAAATCCCTGAAACA+AGG | 0.515887 | 7_3:+69501933 | Msa1120230:CDS |
| CTCCACCCATCACCGTCTCT+CGG | 0.517320 | 7_3:+69503731 | Msa1120230:CDS |
| ATAGAGACTCTAGGGATGGC+TGG | 0.520252 | 7_3:-69503283 | None:intergenic |
| ACAGCTCTCTGACTACTTGA+GGG | 0.522828 | 7_3:-69503766 | None:intergenic |
| TCTCTGACTACTTGAGGGTA+TGG | 0.523866 | 7_3:-69503761 | None:intergenic |
| ATAGTTGAATTTCTTCCGGA+AGG | 0.528425 | 7_3:+69502102 | Msa1120230:intron |
| GTTGATTATGGTCAAAGAAA+GGG | 0.528915 | 7_3:-69497619 | None:intergenic |
| AAATAAATAGTACTTTACCT+TGG | 0.530192 | 7_3:-69503927 | None:intergenic |
| TGTCGACGGACGTGGTAACT+GGG | 0.532607 | 7_3:-69503338 | None:intergenic |
| TAGTTGAATTTCTTCCGGAA+GGG | 0.533301 | 7_3:+69502103 | Msa1120230:intron |
| CACAGCTCTCTGACTACTTG+AGG | 0.535951 | 7_3:-69503767 | None:intergenic |
| GTTGTCTTACTTTCTCGGCT+GGG | 0.536651 | 7_3:-69503081 | None:intergenic |
| TTGATACTTTAAAATCTACA+TGG | 0.539668 | 7_3:-69502997 | None:intergenic |
| GAATAGCTGCTGACTCTTGG+TGG | 0.543602 | 7_3:-69503028 | None:intergenic |
| ACTTCAAGAAGAAAATCAAA+AGG | 0.547746 | 7_3:-69499806 | None:intergenic |
| TGAGAACGCTGTGGAACAGA+AGG | 0.552060 | 7_3:-69499866 | None:intergenic |
| GTCTGTAAAACCTGTCTCTG+GGG | 0.553566 | 7_3:+69503459 | Msa1120230:CDS |
| CTCCCCTTGTTTCTTCACCT+AGG | 0.559756 | 7_3:+69503542 | Msa1120230:CDS |
| ATTGCACTTCACAAAACCGT+TGG | 0.563950 | 7_3:+69497743 | Msa1120230:CDS |
| TCTCTTCAATTTGTTAAGCG+AGG | 0.564228 | 7_3:-69497720 | None:intergenic |
| CGTTGAGCCACATGTTAGGA+TGG | 0.567832 | 7_3:+69502144 | Msa1120230:CDS |
| TCTGTAAAACCTGTCTCTGG+GGG | 0.571028 | 7_3:+69503460 | Msa1120230:CDS |
| TTATCCTAGGTGAAGAAACA+AGG | 0.571253 | 7_3:-69503546 | None:intergenic |
| GCTATGAAACGACACTGAGA+TGG | 0.572733 | 7_3:-69497677 | None:intergenic |
| GAATACCTCTGCAGTTTCTG+TGG | 0.577673 | 7_3:-69502625 | None:intergenic |
| TGGTCAAAGAAAGGGAAGTG+AGG | 0.580989 | 7_3:-69497611 | None:intergenic |
| CCGGAAGGGACTTAAATCAC+TGG | 0.581554 | 7_3:+69502117 | Msa1120230:CDS |
| ACAAGGGGAGGAGAAGCACC+AGG | 0.582384 | 7_3:-69503529 | None:intergenic |
| TTGCTGGTTTGATTAGCAGG+GGG | 0.582432 | 7_3:-69503592 | None:intergenic |
| GAGTACGAGGCCACCGAAGG+CGG | 0.582783 | 7_3:+69502256 | Msa1120230:CDS |
| CTTGCTGGTTTGATTAGCAG+GGG | 0.584609 | 7_3:-69503593 | None:intergenic |
| GCAACAAAATCTTCTCGAGT+AGG | 0.585066 | 7_3:+69503616 | Msa1120230:CDS |
| CATATTGATTACCAATTCAG+TGG | 0.587256 | 7_3:+69502181 | Msa1120230:CDS |
| CTGAGCAGCATGGTGGCGAG+CGG | 0.587516 | 7_3:-69501982 | None:intergenic |
| AGTGAGTGTCCCTCTGTCGA+CGG | 0.589507 | 7_3:-69503352 | None:intergenic |
| GTGTTAGGAGACTACGTGAC+TGG | 0.590317 | 7_3:-69501956 | None:intergenic |
| AAAACTCCGAGAGACGGTGA+TGG | 0.591752 | 7_3:-69503737 | None:intergenic |
| GACACTGAGATGGAACAAAA+CGG | 0.592664 | 7_3:-69497667 | None:intergenic |
| TGCTCACGATGAATATGAAG+AGG | 0.593231 | 7_3:+69501890 | Msa1120230:CDS |
| AAACTCCGAGAGACGGTGAT+GGG | 0.595274 | 7_3:-69503736 | None:intergenic |
| CATCCTAACATGTGGCTCAA+CGG | 0.595642 | 7_3:-69502143 | None:intergenic |
| ACTCAACTCGCCGCCTTCGG+TGG | 0.596372 | 7_3:-69502266 | None:intergenic |
| CTCCGAGAGACGGTGATGGG+TGG | 0.602920 | 7_3:-69503733 | None:intergenic |
| TATGAGTACGAGGCCACCGA+AGG | 0.609614 | 7_3:+69502253 | Msa1120230:CDS |
| CTGCTGAGTTTGGCGATGTG+GGG | 0.616627 | 7_3:-69502315 | None:intergenic |
| TAATGAACTAAGAACCGTTG+AGG | 0.626594 | 7_3:+69499928 | Msa1120230:CDS |
| GAGAATAGAGACTCTAGGGA+TGG | 0.627936 | 7_3:-69503287 | None:intergenic |
| TATCCTAGGTGAAGAAACAA+GGG | 0.628739 | 7_3:-69503545 | None:intergenic |
| TTGAAGCTCGAATGTTTGAA+CGG | 0.632977 | 7_3:-69502602 | None:intergenic |
| TTACCACGTCCGTCGACAGA+GGG | 0.641769 | 7_3:+69503343 | Msa1120230:CDS |
| CCCTGCTAATCAAACCAGCA+AGG | 0.644509 | 7_3:+69503594 | Msa1120230:CDS |
| TCTGGATTCCTTAATCCCAA+AGG | 0.646012 | 7_3:-69503649 | None:intergenic |
| AGCCATCAACAAGTTTCTGA+AGG | 0.647899 | 7_3:-69499760 | None:intergenic |
| ACTGACCATAACCAGACCAT+CGG | 0.653503 | 7_3:+69499895 | Msa1120230:CDS |
| AGTGGCCTTGAAGATGATGA+TGG | 0.653803 | 7_3:+69502199 | Msa1120230:CDS |
| GTTACCACGTCCGTCGACAG+AGG | 0.654948 | 7_3:+69503342 | Msa1120230:CDS |
| AGTTCATCGAACTTAACGGA+AGG | 0.659456 | 7_3:-69497788 | None:intergenic |
| TGGGATAAAGGTGTTAGTGG+AGG | 0.663865 | 7_3:-69503859 | None:intergenic |
| TGAGATGGAACAAAACGGCA+AGG | 0.667907 | 7_3:-69497662 | None:intergenic |
| CTTGAAGATGATGATGGTGA+AGG | 0.669025 | 7_3:+69502205 | Msa1120230:CDS |
| CTCAAGTAGTCAGAGAGCTG+TGG | 0.672080 | 7_3:+69503768 | Msa1120230:CDS |
| GAAGGGACTTAAATCACTGG+AGG | 0.677255 | 7_3:+69502120 | Msa1120230:CDS |
| CACATCGCCAAACTCAGCAG+AGG | 0.677853 | 7_3:+69502318 | Msa1120230:CDS |
| AGTACATAAACATACCTCAA+CGG | 0.678917 | 7_3:-69499942 | None:intergenic |
| GTAATCAATATGTTGCAACT+CGG | 0.679247 | 7_3:-69502170 | None:intergenic |
| TCATTAAGAAGAGACTCCGA+TGG | 0.679806 | 7_3:-69499911 | None:intergenic |
| GAGAACGCTGTGGAACAGAA+GGG | 0.680576 | 7_3:-69499865 | None:intergenic |
| TCGGCAACCATCCTAACATG+TGG | 0.683292 | 7_3:-69502151 | None:intergenic |
| TCTCGCTCTAGTGAAATCCA+AGG | 0.685168 | 7_3:+69503910 | Msa1120230:CDS |
| TTAACAAAACCTGAGCAGCA+TGG | 0.686630 | 7_3:-69501992 | None:intergenic |
| TTAAATGATGATGAAGAGAG+TGG | 0.705260 | 7_3:+69499591 | Msa1120230:CDS |
| TGGGAATGAGTATGAGTACG+AGG | 0.706985 | 7_3:+69502243 | Msa1120230:CDS |
| TTCAACCACAGAAACTGCAG+AGG | 0.710624 | 7_3:+69502620 | Msa1120230:CDS |
| CTAGGTGAAGAAACAAGGGG+AGG | 0.710991 | 7_3:-69503541 | None:intergenic |
| ATCCTAGGTGAAGAAACAAG+GGG | 0.711657 | 7_3:-69503544 | None:intergenic |
| ACAAAACCTGAGCAGCATGG+TGG | 0.713196 | 7_3:-69501989 | None:intergenic |
| AGTGCTACATGAGAACGCTG+TGG | 0.735573 | 7_3:-69499875 | None:intergenic |
| GATGCACTTGCACTTAAGCG+TGG | 0.741765 | 7_3:-69503181 | None:intergenic |
| GCTGAACTTGATACAACCGG+AGG | 0.762971 | 7_3:-69503694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAACATTAATTAATTAAG+CGG | - | chr7_3:69497887-69497906 | None:intergenic | 10.0% |
| !! | AAATATATATCTTATATTGT+TGG | - | chr7_3:69498787-69498806 | None:intergenic | 10.0% |
| !!! | TTAATAGTATTTTTCATTTT+GGG | + | chr7_3:69499273-69499292 | Msa1120230:intron | 10.0% |
| !!! | CATTAATTTAGATTTTATAT+CGG | + | chr7_3:69500599-69500618 | Msa1120230:intron | 10.0% |
| !!! | ATTAATTTAGATTTTATATC+GGG | + | chr7_3:69500600-69500619 | Msa1120230:intron | 10.0% |
| !!! | CAATTAATTTAAGATTTAAA+TGG | - | chr7_3:69502682-69502701 | None:intergenic | 10.0% |
| !!! | ATTTTTTGTTTCTTACTAAA+CGG | + | chr7_3:69498581-69498600 | Msa1120230:intron | 15.0% |
| !!! | GTTAATAGTATTTTTCATTT+TGG | + | chr7_3:69499272-69499291 | Msa1120230:intron | 15.0% |
| !!! | TAATAGTATTTTTCATTTTG+GGG | + | chr7_3:69499274-69499293 | Msa1120230:intron | 15.0% |
| !! | TACTGAAATAAATTAAATGA+GGG | - | chr7_3:69500049-69500068 | None:intergenic | 15.0% |
| !! | ATACTGAAATAAATTAAATG+AGG | - | chr7_3:69500050-69500069 | None:intergenic | 15.0% |
| !! | GTAATTCATGAAATTTATAT+TGG | + | chr7_3:69500225-69500244 | Msa1120230:intron | 15.0% |
| !! | AAAACAAAATCTCTATATTT+AGG | + | chr7_3:69502757-69502776 | Msa1120230:intron | 15.0% |
| !!! | CAAATTAATAAAAGTATTAG+AGG | - | chr7_3:69502949-69502968 | None:intergenic | 15.0% |
| !!! | TCTTGAATTTTGTATAAAAT+TGG | + | chr7_3:69503951-69503970 | Msa1120230:CDS | 15.0% |
| !!! | CTTGAATTTTGTATAAAATT+GGG | + | chr7_3:69503952-69503971 | Msa1120230:CDS | 15.0% |
| !! | ATCTATTAGTTGTAATTTGA+AGG | + | chr7_3:69498053-69498072 | Msa1120230:intron | 20.0% |
| !!! | AGTGTTTTTATTGATTTTAG+TGG | + | chr7_3:69498134-69498153 | Msa1120230:intron | 20.0% |
| !!! | TGATTTTTTTGTTCTTTTGT+TGG | + | chr7_3:69498626-69498645 | Msa1120230:intron | 20.0% |
| !! | TAATCTAATCTCAACTTATA+TGG | + | chr7_3:69499182-69499201 | Msa1120230:intron | 20.0% |
| !! | AATCTAATCTCAACTTATAT+GGG | + | chr7_3:69499183-69499202 | Msa1120230:intron | 20.0% |
| !!! | AATAGTATTTTTCATTTTGG+GGG | + | chr7_3:69499275-69499294 | Msa1120230:intron | 20.0% |
| !! | AAATAAATTAAATGAGGGAA+AGG | - | chr7_3:69500044-69500063 | None:intergenic | 20.0% |
| !! | TTAACAAAAGATAATGTACA+GGG | + | chr7_3:69500195-69500214 | Msa1120230:intron | 20.0% |
| !!! | ATACATACTGATAATGTAAA+AGG | - | chr7_3:69500280-69500299 | None:intergenic | 20.0% |
| !! | ATTATCAGTATGTATATTGT+TGG | + | chr7_3:69500285-69500304 | Msa1120230:intron | 20.0% |
| !!! | AAACATCTATTTTTAATTGC+TGG | - | chr7_3:69500827-69500846 | None:intergenic | 20.0% |
| !!! | GCAATTAAAAATAGATGTTT+TGG | + | chr7_3:69500827-69500846 | Msa1120230:intron | 20.0% |
| !! | ATGAAATATATGATACAAGT+AGG | - | chr7_3:69501120-69501139 | None:intergenic | 20.0% |
| !! | GTAGATATTTACTATAATAG+TGG | + | chr7_3:69501320-69501339 | Msa1120230:intron | 20.0% |
| !! | AAATATAGTTGAATTTCTTC+CGG | + | chr7_3:69502098-69502117 | Msa1120230:intron | 20.0% |
| !! | CAATATTACTCATAATTGTA+TGG | + | chr7_3:69502349-69502368 | Msa1120230:intron | 20.0% |
| !!! | TTATTGCTTACCTTTTAAAA+AGG | + | chr7_3:69502410-69502429 | Msa1120230:intron | 20.0% |
| !! | TTAATTGTAAAGTAAAATCC+AGG | + | chr7_3:69502695-69502714 | Msa1120230:intron | 20.0% |
| !! | ATTATTTGACACCTAATTTA+TGG | + | chr7_3:69502822-69502841 | Msa1120230:intron | 20.0% |
| !!! | ACTTTTATTAATTTGCCTTT+TGG | + | chr7_3:69502954-69502973 | Msa1120230:intron | 20.0% |
| !!! | TTGATACTTTAAAATCTACA+TGG | - | chr7_3:69503000-69503019 | None:intergenic | 20.0% |
| !!! | AATTTCTTTTCTGCAAATAT+TGG | - | chr7_3:69503058-69503077 | None:intergenic | 20.0% |
| !! | AAATAAATAGTACTTTACCT+TGG | - | chr7_3:69503930-69503949 | None:intergenic | 20.0% |
| ! | AGAGAAAGAGAAATGTAAAT+GGG | - | chr7_3:69497574-69497593 | None:intergenic | 25.0% |
| ! | AAGAGAAAGAGAAATGTAAA+TGG | - | chr7_3:69497575-69497594 | None:intergenic | 25.0% |
| ! | ATTAATTAAGCGGAAATTGA+TGG | - | chr7_3:69497877-69497896 | None:intergenic | 25.0% |
| !! | TACAACTAAGCATGATTTTA+GGG | - | chr7_3:69497967-69497986 | None:intergenic | 25.0% |
| !! | ATACAACTAAGCATGATTTT+AGG | - | chr7_3:69497968-69497987 | None:intergenic | 25.0% |
| !! | TGTAGATAGCAAAATTTTGT+TGG | + | chr7_3:69498279-69498298 | Msa1120230:intron | 25.0% |
| !! | GTAGATAGCAAAATTTTGTT+GGG | + | chr7_3:69498280-69498299 | Msa1120230:intron | 25.0% |
| ! | TTCCTAAGTATTAACTAGAA+GGG | - | chr7_3:69498447-69498466 | None:intergenic | 25.0% |
| ! | ATTCCTAAGTATTAACTAGA+AGG | - | chr7_3:69498448-69498467 | None:intergenic | 25.0% |
| ! | TCTAGTTAATACTTAGGAAT+TGG | + | chr7_3:69498448-69498467 | Msa1120230:intron | 25.0% |
| ! | AAAAAATTGTTGCTACCATA+CGG | - | chr7_3:69498568-69498587 | None:intergenic | 25.0% |
| ! | ATTTCTGTCCATTACATATT+TGG | + | chr7_3:69498869-69498888 | Msa1120230:intron | 25.0% |
| !!! | GTTGTTTTCCAAATATGTAA+TGG | - | chr7_3:69498880-69498899 | None:intergenic | 25.0% |
| ! | ATTGGGAAAATAGACATAAT+GGG | - | chr7_3:69499019-69499038 | None:intergenic | 25.0% |
| ! | AATTGGGAAAATAGACATAA+TGG | - | chr7_3:69499020-69499039 | None:intergenic | 25.0% |
| ! | GTTTAATAGTTTATCTGAAC+TGG | + | chr7_3:69499233-69499252 | Msa1120230:intron | 25.0% |
| !! | ATAGTATTTTTCATTTTGGG+GGG | + | chr7_3:69499276-69499295 | Msa1120230:intron | 25.0% |
| ! | TAAGAGACTTTAATATCTCA+AGG | - | chr7_3:69499489-69499508 | None:intergenic | 25.0% |
| ! | TGAGATATTAAAGTCTCTTA+AGG | + | chr7_3:69499489-69499508 | Msa1120230:intron | 25.0% |
| !! | GATACATATTCCAGAATTTT+CGG | + | chr7_3:69499524-69499543 | Msa1120230:intron | 25.0% |
| ! | AAAGCTAGGTAATTTAGATA+TGG | - | chr7_3:69499643-69499662 | None:intergenic | 25.0% |
| ! | ACTTCAAGAAGAAAATCAAA+AGG | - | chr7_3:69499809-69499828 | None:intergenic | 25.0% |
| ! | ACATATATGCATTAACCATT+GGG | - | chr7_3:69500002-69500021 | None:intergenic | 25.0% |
| ! | TACATATATGCATTAACCAT+TGG | - | chr7_3:69500003-69500022 | None:intergenic | 25.0% |
| ! | GTTAACAAAAGATAATGTAC+AGG | + | chr7_3:69500194-69500213 | Msa1120230:intron | 25.0% |
| !!! | ATGAAATTTATATTGGCTCA+GGG | + | chr7_3:69500232-69500251 | Msa1120230:intron | 25.0% |
| ! | ATATACATATATATAACCCC+TGG | - | chr7_3:69500352-69500371 | None:intergenic | 25.0% |
| ! | ATATTTAGATCAATCTTCCT+GGG | - | chr7_3:69501467-69501486 | None:intergenic | 25.0% |
| ! | AATATTTAGATCAATCTTCC+TGG | - | chr7_3:69501468-69501487 | None:intergenic | 25.0% |
| !! | ATATTCTCGAATTTTATGCT+TGG | + | chr7_3:69501499-69501518 | Msa1120230:intron | 25.0% |
| !!! | TGTTTTATTCCAAATCAAAG+AGG | - | chr7_3:69501585-69501604 | None:intergenic | 25.0% |
| ! | ATAGAAAGAAAGTAAGATGT+AGG | - | chr7_3:69501655-69501674 | None:intergenic | 25.0% |
| !!! | TTTTAACTACAGATCAAACA+AGG | + | chr7_3:69502288-69502307 | Msa1120230:CDS | 25.0% |
| !! | CTGTGAAATTCCTTTTTAAA+AGG | - | chr7_3:69502423-69502442 | None:intergenic | 25.0% |
| !! | AACAAGTTGAATCATTAACT+CGG | - | chr7_3:69502543-69502562 | None:intergenic | 25.0% |
| ! | TTTAAATGGGAGTTTCAAAT+TGG | - | chr7_3:69502668-69502687 | None:intergenic | 25.0% |
| ! | TTGAAATATTGTAGTCCTAA+GGG | - | chr7_3:69502739-69502758 | None:intergenic | 25.0% |
| !! | TTTGAAATATTGTAGTCCTA+AGG | - | chr7_3:69502740-69502759 | None:intergenic | 25.0% |
| ! | TAGACCAATATCCATAAATT+AGG | - | chr7_3:69502836-69502855 | None:intergenic | 25.0% |
| ! | GACTATGTAATTCTCATTAT+TGG | + | chr7_3:69502869-69502888 | Msa1120230:intron | 25.0% |
| !! | AAAGTATCTCTAATTTGACT+TGG | + | chr7_3:69502918-69502937 | Msa1120230:intron | 25.0% |
| !! | AAGTATCTCTAATTTGACTT+GGG | + | chr7_3:69502919-69502938 | Msa1120230:intron | 25.0% |
| ! | GCATTAAAAATATCAACTTG+TGG | - | chr7_3:69503379-69503398 | None:intergenic | 25.0% |
| ! | CTGATCCTAAGAAAATAAAA+AGG | + | chr7_3:69503401-69503420 | Msa1120230:CDS | 25.0% |
| ! | TACAACTAATAAATTTCCTC+CGG | + | chr7_3:69503678-69503697 | Msa1120230:CDS | 25.0% |
| GTTGATTATGGTCAAAGAAA+GGG | - | chr7_3:69497622-69497641 | None:intergenic | 30.0% | |
| ! | TGTTGATTATGGTCAAAGAA+AGG | - | chr7_3:69497623-69497642 | None:intergenic | 30.0% |
| !! | ATTCTTCAGAGTGTTGATTA+TGG | - | chr7_3:69497634-69497653 | None:intergenic | 30.0% |
| CACAAATAGTAACATCGTAA+GGG | - | chr7_3:69497848-69497867 | None:intergenic | 30.0% | |
| TCACAAATAGTAACATCGTA+AGG | - | chr7_3:69497849-69497868 | None:intergenic | 30.0% | |
| ! | CAATTGTATGTACGAGTTTT+AGG | - | chr7_3:69498331-69498350 | None:intergenic | 30.0% |
| TCCTAAGTATTAACTAGAAG+GGG | - | chr7_3:69498446-69498465 | None:intergenic | 30.0% | |
| CATATTTGGAAACATACATG+AGG | - | chr7_3:69498487-69498506 | None:intergenic | 30.0% | |
| ! | CAATATGTGACTTGCATATT+TGG | - | chr7_3:69498501-69498520 | None:intergenic | 30.0% |
| CAAATATGCAAGTCACATAT+TGG | + | chr7_3:69498499-69498518 | Msa1120230:intron | 30.0% | |
| AAAAATTGTTGCTACCATAC+GGG | - | chr7_3:69498567-69498586 | None:intergenic | 30.0% | |
| TTTCTTACTAAACGGTTGTT+TGG | + | chr7_3:69498589-69498608 | Msa1120230:intron | 30.0% | |
| AACAGTGTTAAATCTCTTGA+GGG | - | chr7_3:69498739-69498758 | None:intergenic | 30.0% | |
| ! | TTGATCAGCATTTTCATCAT+GGG | - | chr7_3:69498902-69498921 | None:intergenic | 30.0% |
| !! | TAGTATTTTTCATTTTGGGG+GGG | + | chr7_3:69499277-69499296 | Msa1120230:intron | 30.0% |
| ACTCTCTTCATCATCATTTA+AGG | - | chr7_3:69499592-69499611 | None:intergenic | 30.0% | |
| ! | TTAAATGATGATGAAGAGAG+TGG | + | chr7_3:69499591-69499610 | Msa1120230:CDS | 30.0% |
| AATCAACTAGCATAAAAGCT+AGG | - | chr7_3:69499657-69499676 | None:intergenic | 30.0% | |
| AGTACATAAACATACCTCAA+CGG | - | chr7_3:69499945-69499964 | None:intergenic | 30.0% | |
| ! | TTTATTTAAAGCACACCCAA+TGG | + | chr7_3:69499984-69500003 | Msa1120230:intron | 30.0% |
| TAAATTAAATGAGGGAAAGG+TGG | - | chr7_3:69500041-69500060 | None:intergenic | 30.0% | |
| ATGACTGTTACTAGAAAATG+TGG | + | chr7_3:69500140-69500159 | Msa1120230:intron | 30.0% | |
| !! | CATGAAATTTATATTGGCTC+AGG | + | chr7_3:69500231-69500250 | Msa1120230:intron | 30.0% |
| !! | TGAAATTTATATTGGCTCAG+GGG | + | chr7_3:69500233-69500252 | Msa1120230:intron | 30.0% |
| !! | ATATTGTTGGTGACATATTC+TGG | + | chr7_3:69500298-69500317 | Msa1120230:intron | 30.0% |
| AGATCCAGAACTATATTGAA+CGG | - | chr7_3:69500508-69500527 | None:intergenic | 30.0% | |
| GTGTAGTGTTTATAAAGCTT+GGG | - | chr7_3:69500668-69500687 | None:intergenic | 30.0% | |
| TGTGTAGTGTTTATAAAGCT+TGG | - | chr7_3:69500669-69500688 | None:intergenic | 30.0% | |
| ! | AAGCTTTATAAACACTACAC+AGG | + | chr7_3:69500668-69500687 | Msa1120230:intron | 30.0% |
| ACAACTTACTCAAATAAAGG+GGG | - | chr7_3:69500935-69500954 | None:intergenic | 30.0% | |
| CACAACTTACTCAAATAAAG+GGG | - | chr7_3:69500936-69500955 | None:intergenic | 30.0% | |
| CCACAACTTACTCAAATAAA+GGG | - | chr7_3:69500937-69500956 | None:intergenic | 30.0% | |
| TCCACAACTTACTCAAATAA+AGG | - | chr7_3:69500938-69500957 | None:intergenic | 30.0% | |
| ! | GAATATTGATTGTAGCCTTA+TGG | + | chr7_3:69500956-69500975 | Msa1120230:intron | 30.0% |
| CTCATTATATGACACTTACT+TGG | - | chr7_3:69500984-69501003 | None:intergenic | 30.0% | |
| TTTAACACTCACTCTCTTAT+TGG | + | chr7_3:69501037-69501056 | Msa1120230:intron | 30.0% | |
| TTAACACTCACTCTCTTATT+GGG | + | chr7_3:69501038-69501057 | Msa1120230:intron | 30.0% | |
| TTATTGGGTGAAATACATGT+GGG | + | chr7_3:69501053-69501072 | Msa1120230:intron | 30.0% | |
| ATACATTTGTAGTTGATCAC+TGG | + | chr7_3:69501255-69501274 | Msa1120230:intron | 30.0% | |
| TACATTTGTAGTTGATCACT+GGG | + | chr7_3:69501256-69501275 | Msa1120230:intron | 30.0% | |
| ! | TATAATAGTGGAGATTGAAG+CGG | + | chr7_3:69501332-69501351 | Msa1120230:intron | 30.0% |
| AGAATGATGAAAGAATACAG+TGG | + | chr7_3:69501393-69501412 | Msa1120230:intron | 30.0% | |
| AAACTATGTCCTCTTTGATT+TGG | + | chr7_3:69501573-69501592 | Msa1120230:intron | 30.0% | |
| TTTCTTTCTATTCATCATGC+AGG | + | chr7_3:69501664-69501683 | Msa1120230:intron | 30.0% | |
| GAAATATTCACATGAGGATA+AGG | - | chr7_3:69501753-69501772 | None:intergenic | 30.0% | |
| ATTCAGGAAATATTCACATG+AGG | - | chr7_3:69501759-69501778 | None:intergenic | 30.0% | |
| GAAAGCAATACAGAAAATTC+AGG | - | chr7_3:69501775-69501794 | None:intergenic | 30.0% | |
| !!! | AATCTTTGAGATCCTTTTCT+CGG | + | chr7_3:69502036-69502055 | Msa1120230:intron | 30.0% |
| GTAATCAATATGTTGCAACT+CGG | - | chr7_3:69502173-69502192 | None:intergenic | 30.0% | |
| ! | CATATTGATTACCAATTCAG+TGG | + | chr7_3:69502181-69502200 | Msa1120230:CDS | 30.0% |
| !!! | AAGGCAGTTTTGAATATGAT+GGG | + | chr7_3:69502224-69502243 | Msa1120230:CDS | 30.0% |
| AACAAATTCAATATGCACCT+GGG | - | chr7_3:69502384-69502403 | None:intergenic | 30.0% | |
| AAACAAATTCAATATGCACC+TGG | - | chr7_3:69502385-69502404 | None:intergenic | 30.0% | |
| TAGCATCTATAGTTGTAAAC+AGG | - | chr7_3:69502472-69502491 | None:intergenic | 30.0% | |
| ATCATTGCTTATGTATTAGC+AGG | + | chr7_3:69502566-69502585 | Msa1120230:intron | 30.0% | |
| GACACCTAATTTATGGATAT+TGG | + | chr7_3:69502829-69502848 | Msa1120230:intron | 30.0% | |
| ! | TGTAATTCTCATTATTGGCT+TGG | + | chr7_3:69502874-69502893 | Msa1120230:intron | 30.0% |
| ! | AAAGGAAGTACATAAGCATT+AGG | - | chr7_3:69503130-69503149 | None:intergenic | 30.0% |
| ! | TTTGTTTCTTTGATGTTGAC+AGG | - | chr7_3:69503154-69503173 | None:intergenic | 30.0% |
| CCTTTGGATGAAAAAAAGAA+CGG | + | chr7_3:69503229-69503248 | Msa1120230:CDS | 30.0% | |
| CTTTGGATGAAAAAAAGAAC+GGG | + | chr7_3:69503230-69503249 | Msa1120230:CDS | 30.0% | |
| !!! | GCATGCCTTTTTATTTTCTT+AGG | - | chr7_3:69503409-69503428 | None:intergenic | 30.0% |
| !! | ATAAAAAGGCATGCATTTTC+AGG | + | chr7_3:69503415-69503434 | Msa1120230:CDS | 30.0% |
| GGAGGAAATTTATTAGTTGT+AGG | - | chr7_3:69503679-69503698 | None:intergenic | 30.0% | |
| !! | TCTCTTCAATTTGTTAAGCG+AGG | - | chr7_3:69497723-69497742 | None:intergenic | 35.0% |
| ! | CTCTTTCTTCTCTTTTCCAA+CGG | - | chr7_3:69497762-69497781 | None:intergenic | 35.0% |
| !!! | TTGTATGTACGAGTTTTAGG+TGG | - | chr7_3:69498328-69498347 | None:intergenic | 35.0% |
| TGTCCAACCTAACAATATCT+AGG | + | chr7_3:69498381-69498400 | Msa1120230:intron | 35.0% | |
| ATGCCTAGATATTGTTAGGT+TGG | - | chr7_3:69498387-69498406 | None:intergenic | 35.0% | |
| GACAATGCCTAGATATTGTT+AGG | - | chr7_3:69498391-69498410 | None:intergenic | 35.0% | |
| GGGGAAAAAATGAGTCATTA+AGG | - | chr7_3:69498426-69498445 | None:intergenic | 35.0% | |
| CCTAAGTATTAACTAGAAGG+GGG | - | chr7_3:69498445-69498464 | None:intergenic | 35.0% | |
| !! | TTGGTTGTTTTCATGTTCAG+TGG | + | chr7_3:69498525-69498544 | Msa1120230:intron | 35.0% |
| !! | TGGTTGTTTTCATGTTCAGT+GGG | + | chr7_3:69498526-69498545 | Msa1120230:intron | 35.0% |
| ! | GTTCTTTTGTTGGTATGAAC+CGG | + | chr7_3:69498636-69498655 | Msa1120230:intron | 35.0% |
| ! | TTCTTTTGTTGGTATGAACC+GGG | + | chr7_3:69498637-69498656 | Msa1120230:intron | 35.0% |
| CAACAGTGTTAAATCTCTTG+AGG | - | chr7_3:69498740-69498759 | None:intergenic | 35.0% | |
| ! | CTTGATCAGCATTTTCATCA+TGG | - | chr7_3:69498903-69498922 | None:intergenic | 35.0% |
| !! | TTAGAGGAGTGCTCAAAATT+GGG | - | chr7_3:69499036-69499055 | None:intergenic | 35.0% |
| ! | AGAAGCTCTCATTTAAAGTG+AGG | - | chr7_3:69499146-69499165 | None:intergenic | 35.0% |
| !! | AGTATTTTTCATTTTGGGGG+GGG | + | chr7_3:69499278-69499297 | Msa1120230:intron | 35.0% |
| !! | TTAGTTCTTTTTCTCCTTGC+AGG | - | chr7_3:69499384-69499403 | None:intergenic | 35.0% |
| AGAAATGGGTACTTGTCTAT+TGG | + | chr7_3:69499557-69499576 | Msa1120230:CDS | 35.0% | |
| AGTTGTTATGAACTGTATGC+AGG | + | chr7_3:69499701-69499720 | Msa1120230:intron | 35.0% | |
| ! | ACTGTATGCAGGTAAAGTTT+TGG | + | chr7_3:69499712-69499731 | Msa1120230:intron | 35.0% |
| ! | CTGTATGCAGGTAAAGTTTT+GGG | + | chr7_3:69499713-69499732 | Msa1120230:intron | 35.0% |
| ! | TGTATGCAGGTAAAGTTTTG+GGG | + | chr7_3:69499714-69499733 | Msa1120230:intron | 35.0% |
| TAATGAACTAAGAACCGTTG+AGG | + | chr7_3:69499928-69499947 | Msa1120230:CDS | 35.0% | |
| ATCCAGAACTATATTGAACG+GGG | - | chr7_3:69500506-69500525 | None:intergenic | 35.0% | |
| GATCCAGAACTATATTGAAC+GGG | - | chr7_3:69500507-69500526 | None:intergenic | 35.0% | |
| ! | TGTCTCTGTATCTGGTTTAA+TGG | + | chr7_3:69500552-69500571 | Msa1120230:intron | 35.0% |
| ! | GTCTCTGTATCTGGTTTAAT+GGG | + | chr7_3:69500553-69500572 | Msa1120230:intron | 35.0% |
| CTTACTCATCCTTACAAAAC+CGG | + | chr7_3:69500624-69500643 | Msa1120230:intron | 35.0% | |
| ! | GACATATCTCTAAGCATTGT+GGG | + | chr7_3:69500690-69500709 | Msa1120230:intron | 35.0% |
| AAGTCTTGCAAGATTCATTC+AGG | - | chr7_3:69500903-69500922 | None:intergenic | 35.0% | |
| ! | CCCTTTATTTGAGTAAGTTG+TGG | + | chr7_3:69500934-69500953 | Msa1120230:intron | 35.0% |
| CTTATTGGGTGAAATACATG+TGG | + | chr7_3:69501052-69501071 | Msa1120230:intron | 35.0% | |
| TCTAATAAGAGAGTGAGTGT+TGG | + | chr7_3:69501139-69501158 | Msa1120230:intron | 35.0% | |
| ! | TGTGTTAAAATGAGTGTTGC+TGG | + | chr7_3:69501166-69501185 | Msa1120230:intron | 35.0% |
| GTCCATTAGTTAGTAATGTG+TGG | + | chr7_3:69501213-69501232 | Msa1120230:intron | 35.0% | |
| CTCCACACATTACTAACTAA+TGG | - | chr7_3:69501218-69501237 | None:intergenic | 35.0% | |
| CATTAGTTAGTAATGTGTGG+AGG | + | chr7_3:69501216-69501235 | Msa1120230:intron | 35.0% | |
| AGGCATTAAGTTTGTGTAGA+AGG | + | chr7_3:69501288-69501307 | Msa1120230:intron | 35.0% | |
| GGCATTAAGTTTGTGTAGAA+GGG | + | chr7_3:69501289-69501308 | Msa1120230:intron | 35.0% | |
| TTTGTGTAGAAGGGATTTGA+GGG | + | chr7_3:69501298-69501317 | Msa1120230:intron | 35.0% | |
| AGCGTCAATGTGATGAAAAA+AGG | + | chr7_3:69501693-69501712 | Msa1120230:CDS | 35.0% | |
| ATTGCCCAACAGAAAGAAAA+AGG | + | chr7_3:69501816-69501835 | Msa1120230:CDS | 35.0% | |
| TTGCCCAACAGAAAGAAAAA+GGG | + | chr7_3:69501817-69501836 | Msa1120230:CDS | 35.0% | |
| ! | CTTCCCTTTTTCTTTCTGTT+GGG | - | chr7_3:69501823-69501842 | None:intergenic | 35.0% |
| ! | ACTTCCCTTTTTCTTTCTGT+TGG | - | chr7_3:69501824-69501843 | None:intergenic | 35.0% |
| GAAAAAGGGAAGTCAAAAAG+TGG | + | chr7_3:69501831-69501850 | Msa1120230:CDS | 35.0% | |
| ATAGTTGAATTTCTTCCGGA+AGG | + | chr7_3:69502102-69502121 | Msa1120230:intron | 35.0% | |
| TAGTTGAATTTCTTCCGGAA+GGG | + | chr7_3:69502103-69502122 | Msa1120230:intron | 35.0% | |
| !!! | GAAGGCAGTTTTGAATATGA+TGG | + | chr7_3:69502223-69502242 | Msa1120230:CDS | 35.0% |
| ! | TTGTATGGTTTTTAATGCCC+AGG | + | chr7_3:69502364-69502383 | Msa1120230:intron | 35.0% |
| ! | GTGATAGTAAGCTTTTGTGT+TGG | - | chr7_3:69502502-69502521 | None:intergenic | 35.0% |
| ATTGCTTATGTATTAGCAGG+TGG | + | chr7_3:69502569-69502588 | Msa1120230:intron | 35.0% | |
| TTGAAGCTCGAATGTTTGAA+CGG | - | chr7_3:69502605-69502624 | None:intergenic | 35.0% | |
| GTCTAAACTTGTCTACCAAA+AGG | - | chr7_3:69502972-69502991 | None:intergenic | 35.0% | |
| CAACAGTTGTCTTACTTTCT+CGG | - | chr7_3:69503089-69503108 | None:intergenic | 35.0% | |
| TCTTTGATGTTGACAGGTAA+AGG | - | chr7_3:69503148-69503167 | None:intergenic | 35.0% | |
| !!! | CCGTTCTTTTTTTCATCCAA+AGG | - | chr7_3:69503232-69503251 | None:intergenic | 35.0% |
| ! | CTTTGAGAATAGAGACTCTA+GGG | - | chr7_3:69503294-69503313 | None:intergenic | 35.0% |
| ! | TCTTTGAGAATAGAGACTCT+AGG | - | chr7_3:69503295-69503314 | None:intergenic | 35.0% |
| GACAATGGCTTATTAGTCAA+TGG | - | chr7_3:69503442-69503461 | None:intergenic | 35.0% | |
| TATCCTAGGTGAAGAAACAA+GGG | - | chr7_3:69503548-69503567 | None:intergenic | 35.0% | |
| TTATCCTAGGTGAAGAAACA+AGG | - | chr7_3:69503549-69503568 | None:intergenic | 35.0% | |
| TCATGTAGTTCACTTATCCT+AGG | - | chr7_3:69503562-69503581 | None:intergenic | 35.0% | |
| TTATTAGTTGTAGGATGCTC+TGG | - | chr7_3:69503670-69503689 | None:intergenic | 35.0% | |
| TACTCACCAAATTCCAGAAA+AGG | + | chr7_3:69503819-69503838 | Msa1120230:CDS | 35.0% | |
| !!! | CTTCAACCTTTTCTGGAATT+TGG | - | chr7_3:69503828-69503847 | None:intergenic | 35.0% |
| GACACTGAGATGGAACAAAA+CGG | - | chr7_3:69497670-69497689 | None:intergenic | 40.0% | |
| ! | GTTAAGCGAGGACTTCATTT+TGG | - | chr7_3:69497711-69497730 | None:intergenic | 40.0% |
| ATTGCACTTCACAAAACCGT+TGG | + | chr7_3:69497743-69497762 | Msa1120230:CDS | 40.0% | |
| AGTTCATCGAACTTAACGGA+AGG | - | chr7_3:69497791-69497810 | None:intergenic | 40.0% | |
| AGCGAGTTCATCGAACTTAA+CGG | - | chr7_3:69497795-69497814 | None:intergenic | 40.0% | |
| CATCGTAAGGGAGAAAGTAA+CGG | - | chr7_3:69497836-69497855 | None:intergenic | 40.0% | |
| !! | TTATGATAGCTTGCTTGCTG+CGG | + | chr7_3:69498206-69498225 | Msa1120230:intron | 40.0% |
| AACTCGTACATACAATTGCG+AGG | + | chr7_3:69498333-69498352 | Msa1120230:intron | 40.0% | |
| ! | CCCCCTTCTAGTTAATACTT+AGG | + | chr7_3:69498442-69498461 | Msa1120230:intron | 40.0% |
| GCAAGTCACATATTGGAGTT+TGG | + | chr7_3:69498506-69498525 | Msa1120230:intron | 40.0% | |
| TGATCATAGACTACGGCAAT+TGG | - | chr7_3:69498816-69498835 | None:intergenic | 40.0% | |
| ACCATGCTGATCATAGACTA+CGG | - | chr7_3:69498823-69498842 | None:intergenic | 40.0% | |
| TGATCAAGCTTGTGAGATTG+TGG | + | chr7_3:69498915-69498934 | Msa1120230:intron | 40.0% | |
| !!! | TCTTGACGAAGAGGTGTTTT+GGG | + | chr7_3:69498955-69498974 | Msa1120230:intron | 40.0% |
| !! | CTTAGAGGAGTGCTCAAAAT+TGG | - | chr7_3:69499037-69499056 | None:intergenic | 40.0% |
| ! | GCTCTCATTTAAAGTGAGGA+GGG | - | chr7_3:69499142-69499161 | None:intergenic | 40.0% |
| ! | AGCTCTCATTTAAAGTGAGG+AGG | - | chr7_3:69499143-69499162 | None:intergenic | 40.0% |
| !! | GACCTTCAGAAACTTGTTGA+TGG | + | chr7_3:69499758-69499777 | Msa1120230:CDS | 40.0% |
| AGCCATCAACAAGTTTCTGA+AGG | - | chr7_3:69499763-69499782 | None:intergenic | 40.0% | |
| ! | ATGGCTACGTAAGCTTTTGT+TGG | + | chr7_3:69499777-69499796 | Msa1120230:CDS | 40.0% |
| ! | TGGCTACGTAAGCTTTTGTT+GGG | + | chr7_3:69499778-69499797 | Msa1120230:CDS | 40.0% |
| TCATTAAGAAGAGACTCCGA+TGG | - | chr7_3:69499914-69499933 | None:intergenic | 40.0% | |
| !! | TATATTGGCTCAGGGGAAAA+TGG | + | chr7_3:69500240-69500259 | Msa1120230:intron | 40.0% |
| TCCAGAACTATATTGAACGG+GGG | - | chr7_3:69500505-69500524 | None:intergenic | 40.0% | |
| TTATGCGTTGTCTCTGTATC+TGG | + | chr7_3:69500544-69500563 | Msa1120230:intron | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTA+AGG | - | chr7_3:69500626-69500645 | None:intergenic | 40.0% |
| ! | GGACATATCTCTAAGCATTG+TGG | + | chr7_3:69500689-69500708 | Msa1120230:intron | 40.0% |
| !! | TGGAAATTCCGCATTGATTG+TGG | - | chr7_3:69500807-69500826 | None:intergenic | 40.0% |
| TTACTCAAATAAAGGGGGAG+GGG | - | chr7_3:69500930-69500949 | None:intergenic | 40.0% | |
| CTTACTCAAATAAAGGGGGA+GGG | - | chr7_3:69500931-69500950 | None:intergenic | 40.0% | |
| ACTTACTCAAATAAAGGGGG+AGG | - | chr7_3:69500932-69500951 | None:intergenic | 40.0% | |
| GACACTTACTTGGAACCATA+AGG | - | chr7_3:69500974-69500993 | None:intergenic | 40.0% | |
| ! | TGTGGGATCCATTTTCAATG+AGG | - | chr7_3:69501084-69501103 | None:intergenic | 40.0% |
| ATGGATCCCACATAACATAG+CGG | + | chr7_3:69501092-69501111 | Msa1120230:intron | 40.0% | |
| ATTTGTAGTTGATCACTGGG+TGG | + | chr7_3:69501259-69501278 | Msa1120230:intron | 40.0% | |
| TGATCACTGGGTGGTTTATT+AGG | + | chr7_3:69501268-69501287 | Msa1120230:intron | 40.0% | |
| GTTTGTGTAGAAGGGATTTG+AGG | + | chr7_3:69501297-69501316 | Msa1120230:intron | 40.0% | |
| AATACAGTGGCAAGTAACAG+TGG | + | chr7_3:69501406-69501425 | Msa1120230:intron | 40.0% | |
| ATATTGAGTAGAGCATACCC+AGG | + | chr7_3:69501447-69501466 | Msa1120230:intron | 40.0% | |
| AGGGAAGTCAAAAAGTGGTA+AGG | + | chr7_3:69501836-69501855 | Msa1120230:CDS | 40.0% | |
| GGGAAGTCAAAAAGTGGTAA+GGG | + | chr7_3:69501837-69501856 | Msa1120230:CDS | 40.0% | |
| TGCTCACGATGAATATGAAG+AGG | + | chr7_3:69501890-69501909 | Msa1120230:CDS | 40.0% | |
| ! | AAGCAACACTCTGTGCTTTT+CGG | + | chr7_3:69501913-69501932 | Msa1120230:CDS | 40.0% |
| CGGTTAAAATCCCTGAAACA+AGG | + | chr7_3:69501933-69501952 | Msa1120230:CDS | 40.0% | |
| TTAACAAAACCTGAGCAGCA+TGG | - | chr7_3:69501995-69502014 | None:intergenic | 40.0% | |
| ATCAAGACTAGACCGAGAAA+AGG | - | chr7_3:69502051-69502070 | None:intergenic | 40.0% | |
| CTTCACCATCATCATCTTCA+AGG | - | chr7_3:69502207-69502226 | None:intergenic | 40.0% | |
| !! | CTTGAAGATGATGATGGTGA+AGG | + | chr7_3:69502205-69502224 | Msa1120230:CDS | 40.0% |
| !! | TTCACAGAAGCATTTCACTG+TGG | + | chr7_3:69502436-69502455 | Msa1120230:intron | 40.0% |
| AGTTGAGGAGCTTATTTACC+TGG | - | chr7_3:69502716-69502735 | None:intergenic | 40.0% | |
| GTGCATCTTCACATGATTTG+TGG | + | chr7_3:69503197-69503216 | Msa1120230:CDS | 40.0% | |
| TTTGTGGCATTCATCTCCTT+TGG | + | chr7_3:69503213-69503232 | Msa1120230:CDS | 40.0% | |
| ! | AACGGGAAAGATTTTGCTGA+TGG | + | chr7_3:69503247-69503266 | Msa1120230:CDS | 40.0% |
| ! | GAGACAGGTTTTACAGACAA+TGG | - | chr7_3:69503457-69503476 | None:intergenic | 40.0% |
| TTGTCTGTAAAACCTGTCTC+TGG | + | chr7_3:69503457-69503476 | Msa1120230:CDS | 40.0% | |
| TGTCTGTAAAACCTGTCTCT+GGG | + | chr7_3:69503458-69503477 | Msa1120230:CDS | 40.0% | |
| ATCCTAGGTGAAGAAACAAG+GGG | - | chr7_3:69503547-69503566 | None:intergenic | 40.0% | |
| ! | AGAAGATTTTGTTGCCTTGC+TGG | - | chr7_3:69503611-69503630 | None:intergenic | 40.0% |
| GCAACAAAATCTTCTCGAGT+AGG | + | chr7_3:69503616-69503635 | Msa1120230:CDS | 40.0% | |
| TCTGGATTCCTTAATCCCAA+AGG | - | chr7_3:69503652-69503671 | None:intergenic | 40.0% | |
| GATGCTGAACTTGATACAAC+CGG | - | chr7_3:69503700-69503719 | None:intergenic | 40.0% | |
| TATGGAAAAACTCCGAGAGA+CGG | - | chr7_3:69503746-69503765 | None:intergenic | 40.0% | |
| TGGTCAAAGAAAGGGAAGTG+AGG | - | chr7_3:69497614-69497633 | None:intergenic | 45.0% | |
| TGAGATGGAACAAAACGGCA+AGG | - | chr7_3:69497665-69497684 | None:intergenic | 45.0% | |
| GCTATGAAACGACACTGAGA+TGG | - | chr7_3:69497680-69497699 | None:intergenic | 45.0% | |
| !! | CTCAGTGTCGTTTCATAGCT+AGG | + | chr7_3:69497681-69497700 | Msa1120230:five_prime_UTR | 45.0% |
| ! | TAGGCATTGTCAGTTGAGCT+AGG | + | chr7_3:69498400-69498419 | Msa1120230:intron | 45.0% |
| CTGTGTAAGACCACAATGGA+GGG | + | chr7_3:69498700-69498719 | Msa1120230:intron | 45.0% | |
| GTCTTTCTTTCCCTCCATTG+TGG | - | chr7_3:69498713-69498732 | None:intergenic | 45.0% | |
| CAGCATGGTCTTCTGCATTA+CGG | + | chr7_3:69498834-69498853 | Msa1120230:intron | 45.0% | |
| AGCATGGTCTTCTGCATTAC+GGG | + | chr7_3:69498835-69498854 | Msa1120230:intron | 45.0% | |
| GTTTGAGTGTCTTGACGAAG+AGG | + | chr7_3:69498946-69498965 | Msa1120230:intron | 45.0% | |
| !!! | GTCTTGACGAAGAGGTGTTT+TGG | + | chr7_3:69498954-69498973 | Msa1120230:intron | 45.0% |
| !! | AGGTGTTTTGGGCTGGATTT+TGG | + | chr7_3:69498966-69498985 | Msa1120230:intron | 45.0% |
| !! | GGTGTTTTGGGCTGGATTTT+GGG | + | chr7_3:69498967-69498986 | Msa1120230:intron | 45.0% |
| !!! | CTGGATTTTGGGACTTGGTT+GGG | + | chr7_3:69498978-69498997 | Msa1120230:intron | 45.0% |
| AGAGAAGTTGCAAGGCTTAG+AGG | - | chr7_3:69499052-69499071 | None:intergenic | 45.0% | |
| AGAGAGAGGAGAGATATCAC+AGG | - | chr7_3:69499079-69499098 | None:intergenic | 45.0% | |
| TCACGGATCTTGAAAGAGAG+AGG | - | chr7_3:69499093-69499112 | None:intergenic | 45.0% | |
| ! | ATTTAAAGTGAGGAGGGAGG+AGG | - | chr7_3:69499136-69499155 | None:intergenic | 45.0% |
| ! | CTCATTTAAAGTGAGGAGGG+AGG | - | chr7_3:69499139-69499158 | None:intergenic | 45.0% |
| !! | ATTTTTCATTTTGGGGGGGG+TGG | + | chr7_3:69499281-69499300 | Msa1120230:intron | 45.0% |
| !! | TTTTTCATTTTGGGGGGGGT+GGG | + | chr7_3:69499282-69499301 | Msa1120230:intron | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | + | chr7_3:69499328-69499347 | Msa1120230:intron | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | + | chr7_3:69499329-69499348 | Msa1120230:intron | 45.0% |
| ! | CTGGTTTGAGCTAAGGGTTA+AGG | + | chr7_3:69499335-69499354 | Msa1120230:intron | 45.0% |
| TGAGCTAAGGGTTAAGGTGT+TGG | + | chr7_3:69499341-69499360 | Msa1120230:intron | 45.0% | |
| TCTCAAGGCAATGACTGATC+AGG | - | chr7_3:69499474-69499493 | None:intergenic | 45.0% | |
| TGCAGTGACTCCGAAAATTC+TGG | - | chr7_3:69499537-69499556 | None:intergenic | 45.0% | |
| TTCGGAGTCACTGCAAGAAA+TGG | + | chr7_3:69499542-69499561 | Msa1120230:CDS | 45.0% | |
| TCGGAGTCACTGCAAGAAAT+GGG | + | chr7_3:69499543-69499562 | Msa1120230:CDS | 45.0% | |
| ATGATGAAGAGAGTGGTGAG+TGG | + | chr7_3:69499598-69499617 | Msa1120230:intron | 45.0% | |
| TGATGAAGAGAGTGGTGAGT+GGG | + | chr7_3:69499599-69499618 | Msa1120230:intron | 45.0% | |
| !!! | GGTAAAGTTTTGGGGATGCT+TGG | + | chr7_3:69499722-69499741 | Msa1120230:intron | 45.0% |
| ACTGACCATAACCAGACCAT+CGG | + | chr7_3:69499895-69499914 | Msa1120230:CDS | 45.0% | |
| ! | TGGTGACATATTCTGGTTGC+AGG | + | chr7_3:69500305-69500324 | Msa1120230:intron | 45.0% |
| ! | GGTGACATATTCTGGTTGCA+GGG | + | chr7_3:69500306-69500325 | Msa1120230:intron | 45.0% |
| ! | ACATATTCTGGTTGCAGGGA+TGG | + | chr7_3:69500310-69500329 | Msa1120230:intron | 45.0% |
| ! | TGGTTGCAGGGATGGATTTA+GGG | + | chr7_3:69500318-69500337 | Msa1120230:intron | 45.0% |
| AGAGACAACGCATAACCAAC+CGG | - | chr7_3:69500539-69500558 | None:intergenic | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr7_3:69500636-69500655 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr7_3:69500633-69500652 | Msa1120230:intron | 45.0% |
| !! | AAAACCGGCTTGTAAGGTGA+GGG | + | chr7_3:69500639-69500658 | Msa1120230:intron | 45.0% |
| !! | TTCATCGTGTTGGCTTTGAG+GGG | - | chr7_3:69500727-69500746 | None:intergenic | 45.0% |
| !! | CTTCATCGTGTTGGCTTTGA+GGG | - | chr7_3:69500728-69500747 | None:intergenic | 45.0% |
| CTTCAACACCTTCATCGTGT+TGG | - | chr7_3:69500737-69500756 | None:intergenic | 45.0% | |
| !! | CAACACGATGAAGGTGTTGA+AGG | + | chr7_3:69500735-69500754 | Msa1120230:intron | 45.0% |
| GGGTTCCACCTCATTGAAAA+TGG | + | chr7_3:69501073-69501092 | Msa1120230:intron | 45.0% | |
| ! | GGGATCCATTTTCAATGAGG+TGG | - | chr7_3:69501081-69501100 | None:intergenic | 45.0% |
| TGGATCCCACATAACATAGC+GGG | + | chr7_3:69501093-69501112 | Msa1120230:intron | 45.0% | |
| TAGGTCCCGCTATGTTATGT+GGG | - | chr7_3:69501101-69501120 | None:intergenic | 45.0% | |
| CCAGTGATTTAAGTCCCTTC+CGG | - | chr7_3:69502120-69502139 | None:intergenic | 45.0% | |
| GAAGGGACTTAAATCACTGG+AGG | + | chr7_3:69502120-69502139 | Msa1120230:CDS | 45.0% | |
| CATCCTAACATGTGGCTCAA+CGG | - | chr7_3:69502146-69502165 | None:intergenic | 45.0% | |
| CATCTTCAAGGCCACTGAAT+TGG | - | chr7_3:69502195-69502214 | None:intergenic | 45.0% | |
| ! | AGTGGCCTTGAAGATGATGA+TGG | + | chr7_3:69502199-69502218 | Msa1120230:CDS | 45.0% |
| TGGGAATGAGTATGAGTACG+AGG | + | chr7_3:69502243-69502262 | Msa1120230:CDS | 45.0% | |
| GTTTCTACCTCTGCTGAGTT+TGG | - | chr7_3:69502328-69502347 | None:intergenic | 45.0% | |
| TTCAACCACAGAAACTGCAG+AGG | + | chr7_3:69502620-69502639 | Msa1120230:CDS | 45.0% | |
| GAATACCTCTGCAGTTTCTG+TGG | - | chr7_3:69502628-69502647 | None:intergenic | 45.0% | |
| ATAAGCTCCTCAACTCCCTT+AGG | + | chr7_3:69502721-69502740 | Msa1120230:intron | 45.0% | |
| TTGTAGTCCTAAGGGAGTTG+AGG | - | chr7_3:69502731-69502750 | None:intergenic | 45.0% | |
| !! | CATTATTGGCTTGGTCTAGC+TGG | + | chr7_3:69502883-69502902 | Msa1120230:intron | 45.0% |
| GTTGTCTTACTTTCTCGGCT+GGG | - | chr7_3:69503084-69503103 | None:intergenic | 45.0% | |
| AGTTGTCTTACTTTCTCGGC+TGG | - | chr7_3:69503085-69503104 | None:intergenic | 45.0% | |
| ! | GAGAATAGAGACTCTAGGGA+TGG | - | chr7_3:69503290-69503309 | None:intergenic | 45.0% |
| GTCTGTAAAACCTGTCTCTG+GGG | + | chr7_3:69503459-69503478 | Msa1120230:CDS | 45.0% | |
| TCTGTAAAACCTGTCTCTGG+GGG | + | chr7_3:69503460-69503479 | Msa1120230:CDS | 45.0% | |
| !! | TGCTTTTGGAGAGGAAGGTT+GGG | - | chr7_3:69503506-69503525 | None:intergenic | 45.0% |
| !! | ATGCTTTTGGAGAGGAAGGT+TGG | - | chr7_3:69503507-69503526 | None:intergenic | 45.0% |
| !! | TTGCTGGTTTGATTAGCAGG+GGG | - | chr7_3:69503595-69503614 | None:intergenic | 45.0% |
| !! | CTTGCTGGTTTGATTAGCAG+GGG | - | chr7_3:69503596-69503615 | None:intergenic | 45.0% |
| !! | CCTTGCTGGTTTGATTAGCA+GGG | - | chr7_3:69503597-69503616 | None:intergenic | 45.0% |
| !! | ACTCTGCTCCTTTGGGATTA+AGG | + | chr7_3:69503641-69503660 | Msa1120230:CDS | 45.0% |
| TCTCTGACTACTTGAGGGTA+TGG | - | chr7_3:69503764-69503783 | None:intergenic | 45.0% | |
| ACAGCTCTCTGACTACTTGA+GGG | - | chr7_3:69503769-69503788 | None:intergenic | 45.0% | |
| ! | GCAGCTTCTTCAACCTTTTC+TGG | - | chr7_3:69503835-69503854 | None:intergenic | 45.0% |
| !! | TGGGATAAAGGTGTTAGTGG+AGG | - | chr7_3:69503862-69503881 | None:intergenic | 45.0% |
| !! | CTCTGGGATAAAGGTGTTAG+TGG | - | chr7_3:69503865-69503884 | None:intergenic | 45.0% |
| AGATAGAGCTGATGCTCTCT+GGG | - | chr7_3:69503881-69503900 | None:intergenic | 45.0% | |
| TCTCGCTCTAGTGAAATCCA+AGG | + | chr7_3:69503910-69503929 | Msa1120230:CDS | 45.0% | |
| !!! | AAAATACTTTTTTTTTTTAA+TGG | - | chr7_3:69499433-69499452 | None:intergenic | 5.0% |
| !! | ATATATATTAGATTATTATA+TGG | - | chr7_3:69500383-69500402 | None:intergenic | 5.0% |
| !!! | AATTTATGATAAATTTTTTT+TGG | + | chr7_3:69500479-69500498 | Msa1120230:intron | 5.0% |
| !!! | AATTAATTTAAGATTTAAAT+GGG | - | chr7_3:69502681-69502700 | None:intergenic | 5.0% |
| !! | ACCATACGCGCTGTTTTCAG+TGG | - | chr7_3:69498238-69498257 | None:intergenic | 50.0% |
| GAGGTTCCGAGTTCAAACCT+GGG | + | chr7_3:69498352-69498371 | Msa1120230:intron | 50.0% | |
| CCTTCACCCAGGTTTGAACT+CGG | - | chr7_3:69498361-69498380 | None:intergenic | 50.0% | |
| CTACCATACGGGCATCTGTT+TGG | - | chr7_3:69498556-69498575 | None:intergenic | 50.0% | |
| ACTAAAGCGCAGAGGATACC+CGG | - | chr7_3:69498658-69498677 | None:intergenic | 50.0% | |
| ! | TGTGGTCTTACACAGCTCGA+GGG | - | chr7_3:69498695-69498714 | None:intergenic | 50.0% |
| ! | TTGTGGTCTTACACAGCTCG+AGG | - | chr7_3:69498696-69498715 | None:intergenic | 50.0% |
| CGAGCTGTGTAAGACCACAA+TGG | + | chr7_3:69498696-69498715 | Msa1120230:intron | 50.0% | |
| GCTGTGTAAGACCACAATGG+AGG | + | chr7_3:69498699-69498718 | Msa1120230:intron | 50.0% | |
| GCCGTAGTCTATGATCAGCA+TGG | + | chr7_3:69498819-69498838 | Msa1120230:intron | 50.0% | |
| !!! | TTGGGCTGGATTTTGGGACT+TGG | + | chr7_3:69498973-69498992 | Msa1120230:intron | 50.0% |
| !!! | GCTGGATTTTGGGACTTGGT+TGG | + | chr7_3:69498977-69498996 | Msa1120230:intron | 50.0% |
| CAGGCTACAGAGAAGTTGCA+AGG | - | chr7_3:69499060-69499079 | None:intergenic | 50.0% | |
| !! | TTTTCATTTTGGGGGGGGTG+GGG | + | chr7_3:69499283-69499302 | Msa1120230:intron | 50.0% |
| !! | GCTAAGGGTTAAGGTGTTGG+CGG | + | chr7_3:69499344-69499363 | Msa1120230:intron | 50.0% |
| !! | GTTAAGGTGTTGGCGGTCAA+GGG | + | chr7_3:69499351-69499370 | Msa1120230:intron | 50.0% |
| TCAAGGGTTCAAGTCCTGCA+AGG | + | chr7_3:69499367-69499386 | Msa1120230:intron | 50.0% | |
| GAGAACGCTGTGGAACAGAA+GGG | - | chr7_3:69499868-69499887 | None:intergenic | 50.0% | |
| TGAGAACGCTGTGGAACAGA+AGG | - | chr7_3:69499869-69499888 | None:intergenic | 50.0% | |
| AGTGCTACATGAGAACGCTG+TGG | - | chr7_3:69499878-69499897 | None:intergenic | 50.0% | |
| AGACTCCGATGGTCTGGTTA+TGG | - | chr7_3:69499903-69499922 | None:intergenic | 50.0% | |
| AAGAAGAGACTCCGATGGTC+TGG | - | chr7_3:69499909-69499928 | None:intergenic | 50.0% | |
| ! | CTGGTTGCAGGGATGGATTT+AGG | + | chr7_3:69500317-69500336 | Msa1120230:intron | 50.0% |
| ! | GGTTGCAGGGATGGATTTAG+GGG | + | chr7_3:69500319-69500338 | Msa1120230:intron | 50.0% |
| GCCCCCGTTCAATATAGTTC+TGG | + | chr7_3:69500501-69500520 | Msa1120230:intron | 50.0% | |
| AACGCATAACCAACCGGACA+GGG | - | chr7_3:69500533-69500552 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr7_3:69500638-69500657 | Msa1120230:intron | 50.0% |
| !! | CCTTCATCGTGTTGGCTTTG+AGG | - | chr7_3:69500729-69500748 | None:intergenic | 50.0% |
| CCTCAAAGCCAACACGATGA+AGG | + | chr7_3:69500726-69500745 | Msa1120230:intron | 50.0% | |
| ! | GGTGTTGAAGGCTGCAATGA+AGG | + | chr7_3:69500747-69500766 | Msa1120230:intron | 50.0% |
| AGGCAGCGATTACCGCAATT+AGG | + | chr7_3:69500767-69500786 | Msa1120230:intron | 50.0% | |
| CAGCGATTACCGCAATTAGG+CGG | + | chr7_3:69500770-69500789 | Msa1120230:intron | 50.0% | |
| TTACCGCAATTAGGCGGCTA+AGG | + | chr7_3:69500776-69500795 | Msa1120230:intron | 50.0% | |
| TACCGCAATTAGGCGGCTAA+GGG | + | chr7_3:69500777-69500796 | Msa1120230:intron | 50.0% | |
| AGGGCAGACCACAATCAATG+CGG | + | chr7_3:69500796-69500815 | Msa1120230:intron | 50.0% | |
| GTAGGTCCCGCTATGTTATG+TGG | - | chr7_3:69501102-69501121 | None:intergenic | 50.0% | |
| GATTGAAGCGGAACTGAGCA+AGG | + | chr7_3:69501344-69501363 | Msa1120230:intron | 50.0% | |
| !! | ACGTGACTGGCCTTGTTTCA+GGG | - | chr7_3:69501946-69501965 | None:intergenic | 50.0% |
| !! | TACGTGACTGGCCTTGTTTC+AGG | - | chr7_3:69501947-69501966 | None:intergenic | 50.0% |
| GTGTTAGGAGACTACGTGAC+TGG | - | chr7_3:69501959-69501978 | None:intergenic | 50.0% | |
| ACAAAACCTGAGCAGCATGG+TGG | - | chr7_3:69501992-69502011 | None:intergenic | 50.0% | |
| CCGGAAGGGACTTAAATCAC+TGG | + | chr7_3:69502117-69502136 | Msa1120230:CDS | 50.0% | |
| CGTTGAGCCACATGTTAGGA+TGG | + | chr7_3:69502144-69502163 | Msa1120230:CDS | 50.0% | |
| TCGGCAACCATCCTAACATG+TGG | - | chr7_3:69502154-69502173 | None:intergenic | 50.0% | |
| AAAACTCAACTCGCCGCCTT+CGG | - | chr7_3:69502272-69502291 | None:intergenic | 50.0% | |
| TCTGCTGAGTTTGGCGATGT+GGG | - | chr7_3:69502319-69502338 | None:intergenic | 50.0% | |
| !! | GAATAGCTGCTGACTCTTGG+TGG | - | chr7_3:69503031-69503050 | None:intergenic | 50.0% |
| !! | GCTGAATAGCTGCTGACTCT+TGG | - | chr7_3:69503034-69503053 | None:intergenic | 50.0% |
| GATGCACTTGCACTTAAGCG+TGG | - | chr7_3:69503184-69503203 | None:intergenic | 50.0% | |
| ! | ATAGAGACTCTAGGGATGGC+TGG | - | chr7_3:69503286-69503305 | None:intergenic | 50.0% |
| !! | CTGTCTCTGGGGGTTTTTCA+CGG | + | chr7_3:69503470-69503489 | Msa1120230:CDS | 50.0% |
| !! | GCTTTTGGAGAGGAAGGTTG+GGG | - | chr7_3:69503505-69503524 | None:intergenic | 50.0% |
| !! | GGAGATGCTTTTGGAGAGGA+AGG | - | chr7_3:69503511-69503530 | None:intergenic | 50.0% |
| !! | TCCTCTCCAAAAGCATCTCC+TGG | + | chr7_3:69503511-69503530 | Msa1120230:CDS | 50.0% |
| !! | ACCAGGAGATGCTTTTGGAG+AGG | - | chr7_3:69503515-69503534 | None:intergenic | 50.0% |
| !! | GAAGCACCAGGAGATGCTTT+TGG | - | chr7_3:69503520-69503539 | None:intergenic | 50.0% |
| CTAGGTGAAGAAACAAGGGG+AGG | - | chr7_3:69503544-69503563 | None:intergenic | 50.0% | |
| ! | CTCCCCTTGTTTCTTCACCT+AGG | + | chr7_3:69503542-69503561 | Msa1120230:CDS | 50.0% |
| GTTTGATTAGCAGGGGGTCT+AGG | - | chr7_3:69503589-69503608 | None:intergenic | 50.0% | |
| CCCTGCTAATCAAACCAGCA+AGG | + | chr7_3:69503594-69503613 | Msa1120230:CDS | 50.0% | |
| !! | GCCTTGCTGGTTTGATTAGC+AGG | - | chr7_3:69503598-69503617 | None:intergenic | 50.0% |
| AGTAGGTCACTCTGCTCCTT+TGG | + | chr7_3:69503633-69503652 | Msa1120230:CDS | 50.0% | |
| GTAGGTCACTCTGCTCCTTT+GGG | + | chr7_3:69503634-69503653 | Msa1120230:CDS | 50.0% | |
| GCTGAACTTGATACAACCGG+AGG | - | chr7_3:69503697-69503716 | None:intergenic | 50.0% | |
| AAACTCCGAGAGACGGTGAT+GGG | - | chr7_3:69503739-69503758 | None:intergenic | 50.0% | |
| AAAACTCCGAGAGACGGTGA+TGG | - | chr7_3:69503740-69503759 | None:intergenic | 50.0% | |
| CACAGCTCTCTGACTACTTG+AGG | - | chr7_3:69503770-69503789 | None:intergenic | 50.0% | |
| CTCAAGTAGTCAGAGAGCTG+TGG | + | chr7_3:69503768-69503787 | Msa1120230:CDS | 50.0% | |
| !! | GCTGATGCTCTCTGGGATAA+AGG | - | chr7_3:69503874-69503893 | None:intergenic | 50.0% |
| CAGATAGAGCTGATGCTCTC+TGG | - | chr7_3:69503882-69503901 | None:intergenic | 50.0% | |
| TGAACTCGCTCTCGCTGCTA+AGG | + | chr7_3:69497805-69497824 | Msa1120230:CDS | 55.0% | |
| GCCACTGAAAACAGCGCGTA+TGG | + | chr7_3:69498234-69498253 | Msa1120230:intron | 55.0% | |
| CGAGGTTCCGAGTTCAAACC+TGG | + | chr7_3:69498351-69498370 | Msa1120230:intron | 55.0% | |
| CCGAGTTCAAACCTGGGTGA+AGG | + | chr7_3:69498358-69498377 | Msa1120230:intron | 55.0% | |
| ! | TAGGTTGGACACCTTCACCC+AGG | - | chr7_3:69498372-69498391 | None:intergenic | 55.0% |
| GCTCCAAACAGATGCCCGTA+TGG | + | chr7_3:69498550-69498569 | Msa1120230:intron | 55.0% | |
| GTCTCTGCACTAAAGCGCAG+AGG | - | chr7_3:69498666-69498685 | None:intergenic | 55.0% | |
| !!! | GACGAAGAGGTGTTTTGGGC+TGG | + | chr7_3:69498959-69498978 | Msa1120230:intron | 55.0% |
| GGGCACGACTTAAGAGGTCA+CGG | - | chr7_3:69499110-69499129 | None:intergenic | 55.0% | |
| !! | GGTTAAGGTGTTGGCGGTCA+AGG | + | chr7_3:69499350-69499369 | Msa1120230:intron | 55.0% |
| ! | TGCAGGGATGGATTTAGGGG+AGG | + | chr7_3:69500322-69500341 | Msa1120230:intron | 55.0% |
| ! | GCAGGGATGGATTTAGGGGA+GGG | + | chr7_3:69500323-69500342 | Msa1120230:intron | 55.0% |
| GATTTAGGGGAGGGCAACCA+GGG | + | chr7_3:69500332-69500351 | Msa1120230:intron | 55.0% | |
| ATTTAGGGGAGGGCAACCAG+GGG | + | chr7_3:69500333-69500352 | Msa1120230:intron | 55.0% | |
| ! | GTTCTGGATCTGTCCCTGTC+CGG | + | chr7_3:69500517-69500536 | Msa1120230:intron | 55.0% |
| CAACGCATAACCAACCGGAC+AGG | - | chr7_3:69500534-69500553 | None:intergenic | 55.0% | |
| !! | TCGTGTTGGCTTTGAGGGGA+GGG | - | chr7_3:69500723-69500742 | None:intergenic | 55.0% |
| !! | ATCGTGTTGGCTTTGAGGGG+AGG | - | chr7_3:69500724-69500743 | None:intergenic | 55.0% |
| TGCCCTTAGCCGCCTAATTG+CGG | - | chr7_3:69500782-69500801 | None:intergenic | 55.0% | |
| AGCGGAACTGAGCAAGGTGT+AGG | + | chr7_3:69501350-69501369 | Msa1120230:intron | 55.0% | |
| GCGGAACTGAGCAAGGTGTA+GGG | + | chr7_3:69501351-69501370 | Msa1120230:intron | 55.0% | |
| CGGAACTGAGCAAGGTGTAG+GGG | + | chr7_3:69501352-69501371 | Msa1120230:intron | 55.0% | |
| AGGCCGTTGAGCCACATGTT+AGG | + | chr7_3:69502140-69502159 | Msa1120230:CDS | 55.0% | |
| TATGAGTACGAGGCCACCGA+AGG | + | chr7_3:69502253-69502272 | Msa1120230:CDS | 55.0% | |
| CTGCTGAGTTTGGCGATGTG+GGG | - | chr7_3:69502318-69502337 | None:intergenic | 55.0% | |
| CTCTGCTGAGTTTGGCGATG+TGG | - | chr7_3:69502320-69502339 | None:intergenic | 55.0% | |
| CACATCGCCAAACTCAGCAG+AGG | + | chr7_3:69502318-69502337 | Msa1120230:CDS | 55.0% | |
| TGTCGACGGACGTGGTAACT+GGG | - | chr7_3:69503341-69503360 | None:intergenic | 55.0% | |
| TTACCACGTCCGTCGACAGA+GGG | + | chr7_3:69503343-69503362 | Msa1120230:CDS | 55.0% | |
| AGTGAGTGTCCCTCTGTCGA+CGG | - | chr7_3:69503355-69503374 | None:intergenic | 55.0% | |
| CGTGAAAAACCCCCAGAGAC+AGG | - | chr7_3:69503472-69503491 | None:intergenic | 55.0% | |
| GGAGAGGAAGGTTGGGGTAT+CGG | - | chr7_3:69503499-69503518 | None:intergenic | 55.0% | |
| !! | GTGATGGGTGGAGTTGGAAG+TGG | - | chr7_3:69503724-69503743 | None:intergenic | 55.0% |
| ! | AGGCAGGGGCACGACTTAAG+AGG | - | chr7_3:69499116-69499135 | None:intergenic | 60.0% |
| AAGTGAGGAGGGAGGAGGCA+GGG | - | chr7_3:69499131-69499150 | None:intergenic | 60.0% | |
| AAAGTGAGGAGGGAGGAGGC+AGG | - | chr7_3:69499132-69499151 | None:intergenic | 60.0% | |
| ! | GGGGTGGTGGTTAGCTCAAC+TGG | + | chr7_3:69499316-69499335 | Msa1120230:intron | 60.0% |
| GGATTTAGGGGAGGGCAACC+AGG | + | chr7_3:69500331-69500350 | Msa1120230:intron | 60.0% | |
| TGGATCTGTCCCTGTCCGGT+TGG | + | chr7_3:69500521-69500540 | Msa1120230:intron | 60.0% | |
| GCAGCCCTCACCTTACAAGC+CGG | - | chr7_3:69500646-69500665 | None:intergenic | 60.0% | |
| CTGTCGACGGACGTGGTAAC+TGG | - | chr7_3:69503342-69503361 | None:intergenic | 60.0% | |
| GTTACCACGTCCGTCGACAG+AGG | + | chr7_3:69503342-69503361 | Msa1120230:CDS | 60.0% | |
| !! | ACAAGGGGAGGAGAAGCACC+AGG | - | chr7_3:69503532-69503551 | None:intergenic | 60.0% |
| !! | GAGACGGTGATGGGTGGAGT+TGG | - | chr7_3:69503730-69503749 | None:intergenic | 60.0% |
| CTCCACCCATCACCGTCTCT+CGG | + | chr7_3:69503731-69503750 | Msa1120230:CDS | 60.0% | |
| AGTGAGGAGGGAGGAGGCAG+GGG | - | chr7_3:69499130-69499149 | None:intergenic | 65.0% | |
| !! | TCATTTTGGGGGGGGTGGGG+TGG | + | chr7_3:69499286-69499305 | Msa1120230:intron | 65.0% |
| !! | CATTTTGGGGGGGGTGGGGT+GGG | + | chr7_3:69499287-69499306 | Msa1120230:intron | 65.0% |
| GGTGGCGAGCGGCTTGTGTT+AGG | - | chr7_3:69501974-69501993 | None:intergenic | 65.0% | |
| ! | CTGAGCAGCATGGTGGCGAG+CGG | - | chr7_3:69501985-69502004 | None:intergenic | 65.0% |
| GAGTACGAGGCCACCGAAGG+CGG | + | chr7_3:69502256-69502275 | Msa1120230:CDS | 65.0% | |
| ACTCAACTCGCCGCCTTCGG+TGG | - | chr7_3:69502269-69502288 | None:intergenic | 65.0% | |
| TGTCCCTCTGTCGACGGACG+TGG | - | chr7_3:69503349-69503368 | None:intergenic | 65.0% | |
| !! | CTCCGAGAGACGGTGATGGG+TGG | - | chr7_3:69503736-69503755 | None:intergenic | 65.0% |
| CGCTCGCCACCATGCTGCTC+AGG | + | chr7_3:69501983-69502002 | Msa1120230:CDS | 70.0% | |
| TTTGGGGGGGGTGGGGTGGG+TGG | + | chr7_3:69499290-69499309 | Msa1120230:intron | 75.0% | |
| TTGGGGGGGGTGGGGTGGGT+GGG | + | chr7_3:69499291-69499310 | Msa1120230:intron | 75.0% | |
| ! | TGGGGGGGGTGGGGTGGGTG+GGG | + | chr7_3:69499292-69499311 | Msa1120230:intron | 80.0% |
| ! | GGGGGTGGGGTGGGTGGGGT+GGG | + | chr7_3:69499296-69499315 | Msa1120230:intron | 80.0% |
| ! | GGGGTGGGGTGGGTGGGGTG+GGG | + | chr7_3:69499297-69499316 | Msa1120230:intron | 80.0% |
| ! | GTGGGGTGGGTGGGGTGGGG+TGG | + | chr7_3:69499300-69499319 | Msa1120230:intron | 80.0% |
| ! | GGGTGGGTGGGGTGGGGTGG+TGG | + | chr7_3:69499303-69499322 | Msa1120230:intron | 80.0% |
| ! | GGGGGGTGGGGTGGGTGGGG+TGG | + | chr7_3:69499295-69499314 | Msa1120230:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 69497555 | 69503990 | 69497555 | ID=Msa1120230;Name=Msa1120230 |
| chr7_3 | mRNA | 69497555 | 69503990 | 69497555 | ID=Msa1120230-mRNA-1;Parent=Msa1120230;Name=Msa1120230-mRNA-1;_AED=0.15;_eAED=0.15;_QI=158|0.75|0.66|0.88|1|1|9|0|652 |
| chr7_3 | exon | 69497555 | 69497826 | 69497555 | ID=Msa1120230-mRNA-1:exon:17606;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69498100 | 69498106 | 69498100 | ID=Msa1120230-mRNA-1:exon:17607;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69499538 | 69499612 | 69499538 | ID=Msa1120230-mRNA-1:exon:17608;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69499723 | 69499949 | 69499723 | ID=Msa1120230-mRNA-1:exon:17609;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69501686 | 69501714 | 69501686 | ID=Msa1120230-mRNA-1:exon:17610;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69501797 | 69502004 | 69501797 | ID=Msa1120230-mRNA-1:exon:17611;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69502106 | 69502339 | 69502106 | ID=Msa1120230-mRNA-1:exon:17612;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69502588 | 69502641 | 69502588 | ID=Msa1120230-mRNA-1:exon:17613;Parent=Msa1120230-mRNA-1 |
| chr7_3 | exon | 69502980 | 69503990 | 69502980 | ID=Msa1120230-mRNA-1:exon:17614;Parent=Msa1120230-mRNA-1 |
| chr7_3 | five_prime_UTR | 69497555 | 69497712 | 69497555 | ID=Msa1120230-mRNA-1:five_prime_utr;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69497713 | 69497826 | 69497713 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69498100 | 69498106 | 69498100 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69499538 | 69499612 | 69499538 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69499723 | 69499949 | 69499723 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69501686 | 69501714 | 69501686 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69501797 | 69502004 | 69501797 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69502106 | 69502339 | 69502106 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69502588 | 69502641 | 69502588 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| chr7_3 | CDS | 69502980 | 69503990 | 69502980 | ID=Msa1120230-mRNA-1:cds;Parent=Msa1120230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
