AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1121500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121500 MtrunA17_Chr7g0249781 96.712 365 12 0 1 365 1 365 0.0 716
Msa1121500 MtrunA17_Chr4g0055041 57.267 344 137 4 20 354 26 368 1.42e-140 404
Msa1121500 MtrunA17_Chr2g0283381 48.083 339 167 3 21 353 34 369 4.09e-115 339
Msa1121500 MtrunA17_Chr3g0102091 49.544 329 161 2 23 346 41 369 2.11e-106 317
Msa1121500 MtrunA17_Chr8g0346091 38.532 327 195 3 21 346 45 366 1.17e-68 220
Msa1121500 MtrunA17_Chr3g0132551 32.471 348 214 4 23 353 11 354 3.11e-60 198
Msa1121500 MtrunA17_Chr5g0426921 34.557 327 195 4 41 353 32 353 6.36e-59 194
Msa1121500 MtrunA17_Chr2g0296481 35.110 319 193 5 50 364 72 380 8.96e-56 187
Msa1121500 MtrunA17_Chr2g0296491 32.778 360 228 7 5 357 44 396 1.36e-55 187
Msa1121500 MtrunA17_Chr6g0483671 51.316 152 74 0 195 346 4 155 1.04e-49 164
Msa1121500 MtrunA17_Chr3g0132561 29.885 348 191 6 20 353 11 319 1.01e-45 159
Msa1121500 MtrunA17_Chr2g0313931 51.974 152 71 2 2 152 4 154 9.02e-45 152
Msa1121500 MtrunA17_Chr2g0313921 52.055 73 30 1 189 261 1 68 7.24e-15 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121500 AT1G44750.6 65.489 368 123 2 1 365 1 367 2.25e-163 462
Msa1121500 AT1G44750.2 65.489 368 123 2 1 365 1 367 2.25e-163 462
Msa1121500 AT1G44750.1 65.753 365 121 2 4 365 16 379 2.11e-162 460
Msa1121500 AT1G44750.7 68.750 304 94 1 62 365 1 303 3.54e-139 398
Msa1121500 AT1G44750.5 68.750 304 94 1 62 365 1 303 3.54e-139 398
Msa1121500 AT1G44750.4 68.750 304 94 1 62 365 1 303 3.54e-139 398
Msa1121500 AT1G44750.8 68.750 304 94 1 62 365 1 303 3.54e-139 398
Msa1121500 AT1G44750.3 68.750 304 94 1 62 365 1 303 3.54e-139 398
Msa1121500 AT4G08700.1 55.769 364 149 3 3 358 2 361 2.00e-135 390
Msa1121500 AT5G41160.1 54.945 364 155 3 3 358 2 364 9.49e-129 374
Msa1121500 AT4G18220.1 51.081 370 170 5 2 364 20 385 5.96e-127 370
Msa1121500 AT4G18210.1 53.623 345 149 5 20 359 39 377 6.03e-120 352
Msa1121500 AT4G18205.1 49.419 344 169 2 23 364 34 374 3.54e-104 311
Msa1121500 AT4G18197.1 50.151 331 160 2 20 348 37 364 9.17e-102 306
Msa1121500 AT4G18195.1 49.292 353 173 2 5 353 22 372 9.74e-102 306
Msa1121500 AT4G18190.1 44.857 350 186 3 20 362 27 376 1.98e-95 290
Msa1121500 AT1G28220.1 36.170 329 200 3 30 351 5 330 4.54e-67 216
Msa1121500 AT2G33750.2 35.608 337 205 4 30 358 7 339 2.11e-65 211
Msa1121500 AT2G33750.1 34.770 348 204 5 30 358 7 350 5.04e-63 205
Msa1121500 AT1G28230.1 36.709 316 185 3 41 343 16 329 7.08e-62 202
Msa1121500 AT1G57980.1 35.342 365 197 9 3 340 20 372 1.86e-49 171
Msa1121500 AT1G57990.1 34.819 359 205 10 4 340 17 368 3.14e-48 167
Msa1121500 AT2G24220.1 35.443 316 194 3 23 335 32 340 4.15e-48 166
Msa1121500 AT2G24220.2 35.443 316 194 3 23 335 50 358 5.10e-48 167
Msa1121500 AT1G57943.2 31.525 387 229 11 3 362 19 396 1.44e-44 158
Msa1121500 AT1G57943.1 31.525 387 229 11 3 362 20 397 1.51e-44 158
Msa1121500 AT1G30840.2 33.441 311 200 5 33 340 30 336 2.43e-42 152
Msa1121500 AT1G30840.1 33.441 311 200 5 33 340 30 336 2.43e-42 152
Msa1121500 AT1G19770.1 32.749 342 189 7 41 349 59 392 2.97e-40 146
Msa1121500 AT1G47603.1 31.467 375 233 9 3 358 23 392 2.38e-39 144
Msa1121500 AT1G09860.1 33.762 311 177 8 26 315 27 329 8.08e-37 137
Msa1121500 AT1G75470.1 28.869 336 219 6 23 340 39 372 1.45e-28 115

Find 98 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTATGCTTATGGCTTTA+TGG 0.069335 7_3:-71542861 Msa1121500:CDS
AAACTATCTTGATGATTTAA+AGG 0.164284 7_3:-71542815 Msa1121500:CDS
ATGTTGAGATTATTCAATTT+TGG 0.206473 7_3:-71542746 Msa1121500:exon
GTCATCAACTGTCATCAATT+TGG 0.232933 7_3:-71544637 Msa1121500:five_prime_UTR
ATACTAGCTCATTATTTCTA+TGG 0.234790 7_3:+71542618 None:intergenic
TTCTATGCTTATGGCTTTAT+GGG 0.239381 7_3:-71542860 Msa1121500:CDS
ATTTGAGAAGGTTCTGAAAA+AGG 0.247832 7_3:-71543202 Msa1121500:CDS
GAAGATAATTTCTATGCTTA+TGG 0.269145 7_3:-71542869 Msa1121500:CDS
GCGATGGCAATGGTGGTTTC+TGG 0.316740 7_3:-71543769 Msa1121500:CDS
TGTTATCAGTACTGTCTCTT+TGG 0.331535 7_3:-71542944 Msa1121500:CDS
AAATTGTGAGTGACGGCTTC+GGG 0.332294 7_3:+71544602 None:intergenic
CTTGAGCAAAGGCATGTTAC+TGG 0.334068 7_3:+71542717 None:intergenic
AGCATAATGTTTCTTATTGT+GGG 0.337079 7_3:-71543738 Msa1121500:CDS
AGAGCCAGAAAAGAAAATTA+AGG 0.355477 7_3:+71542691 None:intergenic
GTATACCTGTCATGTTGAAT+TGG 0.359157 7_3:+71544443 None:intergenic
CAAATTGTGAGTGACGGCTT+CGG 0.361605 7_3:+71544601 None:intergenic
GCCATTCACCACTTGCAAAT+AGG 0.368816 7_3:+71543109 None:intergenic
GCAACTTGTGCTTCCACAAT+AGG 0.382625 7_3:-71543132 Msa1121500:CDS
CATCGCTTGTATTTGTTAAA+CGG 0.387486 7_3:+71543786 None:intergenic
GAAGAAGGAATTGTGAATAA+TGG 0.392352 7_3:+71543609 None:intergenic
GTTGATGACCATTACCTTAC+GGG 0.395523 7_3:+71544651 None:intergenic
TATCAAAGCGATGAGTTTGA+TGG 0.405958 7_3:+71543551 None:intergenic
GAAGATTCGGACACACCTTC+TGG 0.412361 7_3:-71543315 Msa1121500:CDS
CAGCATAATGTTTCTTATTG+TGG 0.415420 7_3:-71543739 Msa1121500:CDS
AAAGGTTAAAAGGAACGAAT+AGG 0.424682 7_3:+71544568 None:intergenic
CTTATGTAATGACATTGGTT+TGG 0.429570 7_3:-71543041 Msa1121500:CDS
CCGAAGGGAAAATACGTTGT+TGG 0.440430 7_3:-71543288 Msa1121500:CDS
TCTTGCTGTCAATGAAGATT+CGG 0.441899 7_3:-71543328 Msa1121500:CDS
AAAACTATAACAGCGGCAAT+AGG 0.443240 7_3:+71542913 None:intergenic
TAGTATAGATACGAGGTTCT+TGG 0.445859 7_3:-71542601 Msa1121500:three_prime_UTR
CAGAGAGGTACAAAAGTCCT+TGG 0.451414 7_3:+71543481 None:intergenic
CAATCTGCTGCAGTTATCCT+TGG 0.454009 7_3:-71543714 Msa1121500:CDS
AATAATGGAATGAGCAAGAC+TGG 0.462048 7_3:+71543624 None:intergenic
AGACTGGGAAGGCAATAGTT+TGG 0.462480 7_3:+71543640 None:intergenic
GCATGGCAGGTTTGTTCCGT+TGG 0.469753 7_3:-71543009 Msa1121500:CDS
TAGTTTGCACGGAGAAATGA+AGG 0.471497 7_3:-71543085 Msa1121500:CDS
GTTTGTTCCGTTGGTGTGGT+TGG 0.471545 7_3:-71543000 Msa1121500:CDS
TTGGACAGCAATAGCATGGC+AGG 0.471881 7_3:-71543022 Msa1121500:CDS
TACTAGCTCATTATTTCTAT+GGG 0.474055 7_3:+71542619 None:intergenic
TATACCTGTCATGTTGAATT+GGG 0.476082 7_3:+71544444 None:intergenic
AGAAGAATAGTGAAGAAGAG+AGG 0.482413 7_3:+71544514 None:intergenic
AGCTAGCAGTACTGCACCTA+AGG 0.485183 7_3:+71542664 None:intergenic
GCCTATTTGCAAGTGGTGAA+TGG 0.496092 7_3:-71543110 Msa1121500:CDS
GAAGAATAGTGAAGAAGAGA+GGG 0.497830 7_3:+71544515 None:intergenic
ATTGTTCCTGCTATGATCAT+CGG 0.501298 7_3:+71543819 None:intergenic
AGTTGATGACCATTACCTTA+CGG 0.506305 7_3:+71544650 None:intergenic
AATTCCTTCTTCAACTTCAG+AGG 0.508788 7_3:-71543598 Msa1121500:CDS
CTCAAGGTGGAAATAGTACA+TGG 0.515381 7_3:-71543677 Msa1121500:CDS
ATTCTGAGCCCGTAAGGTAA+TGG 0.517201 7_3:-71544659 Msa1121500:five_prime_UTR
ATTGTGAGTGACGGCTTCGG+GGG 0.523077 7_3:+71544604 None:intergenic
ATGGCAATGGTGGTTTCTGG+TGG 0.534184 7_3:-71543766 Msa1121500:CDS
TCTATGCTTATGGCTTTATG+GGG 0.534545 7_3:-71542859 Msa1121500:CDS
AATTGTCAAATTGTGAGTGA+CGG 0.536978 7_3:+71544595 None:intergenic
GTTGGTTTCCTATGTACACT+TGG 0.539293 7_3:-71543270 Msa1121500:CDS
GGGTTGAAGAATGTCGTTGT+TGG 0.549408 7_3:+71544535 None:intergenic
GAAGCCTCTGAAGTTGAAGA+AGG 0.554606 7_3:+71543594 None:intergenic
AGAGAGGTACAAAAGTCCTT+GGG 0.561514 7_3:+71543482 None:intergenic
GAAGAACCGATGATCATAGC+AGG 0.561653 7_3:-71543825 Msa1121500:CDS
CAGAAGCTCCAAGTGTACAT+AGG 0.572749 7_3:+71543262 None:intergenic
CATACCCAATTCAACATGAC+AGG 0.572798 7_3:-71544448 Msa1121500:intron
AGTTGCTTATGTAATGACAT+TGG 0.576473 7_3:-71543046 Msa1121500:CDS
GAGCATAGTAAAATCTTCCA+AGG 0.576847 7_3:+71543697 None:intergenic
TGGCAATGGTGGTTTCTGGT+GGG 0.578672 7_3:-71543765 Msa1121500:CDS
AAGGCAAGACGTGCACAAGC+TGG 0.580418 7_3:-71542796 Msa1121500:CDS
ACTTGCAAATAGGCCTATTG+TGG 0.580700 7_3:+71543119 None:intergenic
CATGCAACTGACATTTGAGA+AGG 0.589473 7_3:-71543214 Msa1121500:CDS
TCTCAAATGTCAGTTGCATG+AGG 0.589555 7_3:+71543217 None:intergenic
TTTCCCTTCGGGATACCAGA+AGG 0.589682 7_3:+71543300 None:intergenic
AATTGTGAGTGACGGCTTCG+GGG 0.591409 7_3:+71544603 None:intergenic
CAACATGAAGATTCATTGCG+AGG 0.593536 7_3:+71542763 None:intergenic
AATCAAGCCAACCACACCAA+CGG 0.597943 7_3:+71542993 None:intergenic
AGGTGGAAATAGTACATGGA+TGG 0.598566 7_3:-71543673 Msa1121500:CDS
CTCAAATGTCAGTTGCATGA+GGG 0.599422 7_3:+71543218 None:intergenic
CACACCATTCTGAGCCCGTA+AGG 0.601380 7_3:-71544665 Msa1121500:five_prime_UTR
TGGTTTGGACAGCAATAGCA+TGG 0.602152 7_3:-71543026 Msa1121500:CDS
AATTAAGGCTACTTGAGCAA+AGG 0.604656 7_3:+71542706 None:intergenic
GCGATGAGTTTGATGGAAGG+TGG 0.607708 7_3:+71543558 None:intergenic
AATACAAGCGATGGCAATGG+TGG 0.610265 7_3:-71543776 Msa1121500:CDS
GGTGAATGGCATAGTTTGCA+CGG 0.610703 7_3:-71543096 Msa1121500:CDS
GCAGGTTTGTTCCGTTGGTG+TGG 0.611186 7_3:-71543004 Msa1121500:CDS
TGGAATGAGCAAGACTGGGA+AGG 0.614474 7_3:+71543629 None:intergenic
GATAATATGATGTATTCCCA+AGG 0.614660 7_3:-71543498 Msa1121500:CDS
ATTACCTTACGGGCTCAGAA+TGG 0.615416 7_3:+71544661 None:intergenic
ACAAATACAAGCGATGGCAA+TGG 0.616511 7_3:-71543779 Msa1121500:CDS
TTGAGTAGAGAGAAGACACT+AGG 0.617171 7_3:+71542968 None:intergenic
CGTTTAACAAATACAAGCGA+TGG 0.618641 7_3:-71543785 Msa1121500:CDS
CTGAATCGTAGAATAACAGA+AGG 0.626135 7_3:-71544688 None:intergenic
CACACCTTCTGGTATCCCGA+AGG 0.626392 7_3:-71543304 Msa1121500:CDS
ACAATAGGCCTATTTGCAAG+TGG 0.627186 7_3:-71543117 Msa1121500:CDS
TTGTGAGTGACGGCTTCGGG+GGG 0.629960 7_3:+71544605 None:intergenic
ACAAATCAGTGCATATGTAG+AGG 0.646577 7_3:+71543458 None:intergenic
ACACCTTCTGGTATCCCGAA+GGG 0.656183 7_3:-71543303 Msa1121500:CDS
GTGCATATGTAGAGGCAGAG+AGG 0.658155 7_3:+71543466 None:intergenic
ATAATGGAATGAGCAAGACT+GGG 0.659944 7_3:+71543625 None:intergenic
AAAGCGATGAGTTTGATGGA+AGG 0.680365 7_3:+71543555 None:intergenic
AGTTTGCACGGAGAAATGAA+GGG 0.684483 7_3:-71543084 Msa1121500:CDS
AGATAAAGTGAGAATCACAG+TGG 0.706964 7_3:+71543359 None:intergenic
AATGAGCTAGTATAGATACG+AGG 0.769640 7_3:-71542608 Msa1121500:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAATTAAGTCATTATTA+AGG - chr7_3:71542880-71542899 Msa1121500:CDS 15.0%
!! ATGAATTAAGTCATTATTAA+GGG - chr7_3:71542881-71542900 Msa1121500:CDS 15.0%
!! TATGAATTAAGTCATTATTA+AGG - chr7_3:71542880-71542899 Msa1121500:CDS 15.0%
!! ATGAATTAAGTCATTATTAA+GGG - chr7_3:71542881-71542900 Msa1121500:CDS 15.0%
!! TGATAAGATAAATATGCAAA+GGG + chr7_3:71543036-71543055 None:intergenic 20.0%
!!! TTTTTCATGATAAGATGAAT+GGG - chr7_3:71544365-71544384 Msa1121500:intron 20.0%
!!! AAACTATCTTGATGATTTAA+AGG - chr7_3:71544444-71544463 Msa1121500:intron 20.0%
!!! ATGTTGAGATTATTCAATTT+TGG - chr7_3:71544513-71544532 Msa1121500:five_prime_UTR 20.0%
!! TGATAAGATAAATATGCAAA+GGG + chr7_3:71543036-71543055 None:intergenic 20.0%
!!! TTTTTCATGATAAGATGAAT+GGG - chr7_3:71544365-71544384 Msa1121500:intron 20.0%
!!! AAACTATCTTGATGATTTAA+AGG - chr7_3:71544444-71544463 Msa1121500:intron 20.0%
!!! ATGTTGAGATTATTCAATTT+TGG - chr7_3:71544513-71544532 Msa1121500:five_prime_UTR 20.0%
! TGACGAAAAAAAAGGTTAAA+AGG + chr7_3:71542704-71542723 None:intergenic 25.0%
! GAAGTAAAAAAAGAAGACAA+AGG + chr7_3:71542774-71542793 None:intergenic 25.0%
! ATGACTTAATTCATAAGTCA+TGG + chr7_3:71542875-71542894 None:intergenic 25.0%
! CTGATAAGATAAATATGCAA+AGG + chr7_3:71543037-71543056 None:intergenic 25.0%
! CTTTGCATATTTATCTTATC+AGG - chr7_3:71543035-71543054 Msa1121500:CDS 25.0%
!! ATCTTATCAGGATCAAATTT+TGG - chr7_3:71543047-71543066 Msa1121500:CDS 25.0%
!! AAATTTTGGATTTACTGCAT+GGG - chr7_3:71543061-71543080 Msa1121500:CDS 25.0%
! TGTATTTGAGCATGAATTTA+AGG - chr7_3:71543159-71543178 Msa1121500:CDS 25.0%
! AGCTTAAAGCTAATTCAAAT+TGG + chr7_3:71543186-71543205 None:intergenic 25.0%
! TCTCTAATGAAAAATTGAGA+TGG - chr7_3:71543241-71543260 Msa1121500:CDS 25.0%
! TTATTCCGAAATTCCAAAAT+TGG - chr7_3:71543303-71543322 Msa1121500:CDS 25.0%
! AGCATAATGTTTCTTATTGT+GGG - chr7_3:71543521-71543540 Msa1121500:CDS 25.0%
!! GCTTTGATATATTTTGTTCT+TGG - chr7_3:71543722-71543741 Msa1121500:CDS 25.0%
! ATCATGAAAAACTATAACAG+CGG + chr7_3:71544356-71544375 None:intergenic 25.0%
!! GTTTTTCATGATAAGATGAA+TGG - chr7_3:71544364-71544383 Msa1121500:intron 25.0%
!! TTTTCATGATAAGATGAATG+GGG - chr7_3:71544366-71544385 Msa1121500:intron 25.0%
! GAAGATAATTTCTATGCTTA+TGG - chr7_3:71544390-71544409 Msa1121500:intron 25.0%
!!! AAGATAGTTTTGATAGATGT+AGG + chr7_3:71544434-71544453 None:intergenic 25.0%
!!! TACTAGCTCATTATTTCTAT+GGG + chr7_3:71544643-71544662 None:intergenic 25.0%
!!! ATACTAGCTCATTATTTCTA+TGG + chr7_3:71544644-71544663 None:intergenic 25.0%
! TGACGAAAAAAAAGGTTAAA+AGG + chr7_3:71542704-71542723 None:intergenic 25.0%
! GAAGTAAAAAAAGAAGACAA+AGG + chr7_3:71542774-71542793 None:intergenic 25.0%
! ATGACTTAATTCATAAGTCA+TGG + chr7_3:71542875-71542894 None:intergenic 25.0%
! CTGATAAGATAAATATGCAA+AGG + chr7_3:71543037-71543056 None:intergenic 25.0%
! CTTTGCATATTTATCTTATC+AGG - chr7_3:71543035-71543054 Msa1121500:CDS 25.0%
!! ATCTTATCAGGATCAAATTT+TGG - chr7_3:71543047-71543066 Msa1121500:CDS 25.0%
!! AAATTTTGGATTTACTGCAT+GGG - chr7_3:71543061-71543080 Msa1121500:CDS 25.0%
! TGTATTTGAGCATGAATTTA+AGG - chr7_3:71543159-71543178 Msa1121500:CDS 25.0%
! AGCTTAAAGCTAATTCAAAT+TGG + chr7_3:71543186-71543205 None:intergenic 25.0%
! TCTCTAATGAAAAATTGAGA+TGG - chr7_3:71543241-71543260 Msa1121500:CDS 25.0%
! TTATTCCGAAATTCCAAAAT+TGG - chr7_3:71543303-71543322 Msa1121500:CDS 25.0%
! AGCATAATGTTTCTTATTGT+GGG - chr7_3:71543521-71543540 Msa1121500:CDS 25.0%
!! GCTTTGATATATTTTGTTCT+TGG - chr7_3:71543722-71543741 Msa1121500:CDS 25.0%
! ATCATGAAAAACTATAACAG+CGG + chr7_3:71544356-71544375 None:intergenic 25.0%
!! GTTTTTCATGATAAGATGAA+TGG - chr7_3:71544364-71544383 Msa1121500:intron 25.0%
!! TTTTCATGATAAGATGAATG+GGG - chr7_3:71544366-71544385 Msa1121500:intron 25.0%
! GAAGATAATTTCTATGCTTA+TGG - chr7_3:71544390-71544409 Msa1121500:intron 25.0%
!!! AAGATAGTTTTGATAGATGT+AGG + chr7_3:71544434-71544453 None:intergenic 25.0%
!!! TACTAGCTCATTATTTCTAT+GGG + chr7_3:71544643-71544662 None:intergenic 25.0%
!!! ATACTAGCTCATTATTTCTA+TGG + chr7_3:71544644-71544663 None:intergenic 25.0%
AATTGTCAAATTGTGAGTGA+CGG + chr7_3:71542667-71542686 None:intergenic 30.0%
AAAGGTTAAAAGGAACGAAT+AGG + chr7_3:71542694-71542713 None:intergenic 30.0%
TATACCTGTCATGTTGAATT+GGG + chr7_3:71542818-71542837 None:intergenic 30.0%
! TCTCTCTGTTTTCATCTATT+TGG - chr7_3:71542846-71542865 Msa1121500:CDS 30.0%
TGAAATCTGCATAAGCATAA+GGG + chr7_3:71542913-71542932 None:intergenic 30.0%
ATGAAATCTGCATAAGCATA+AGG + chr7_3:71542914-71542933 None:intergenic 30.0%
ACCTAGCAGAAGAATAATAT+TGG + chr7_3:71542977-71542996 None:intergenic 30.0%
! CAAATTTTGGATTTACTGCA+TGG - chr7_3:71543060-71543079 Msa1121500:CDS 30.0%
! TTAACAGCTATATGATGGAA+GGG + chr7_3:71543106-71543125 None:intergenic 30.0%
!!! AAGAGCCAATTTTGGAATTT+CGG + chr7_3:71543311-71543330 None:intergenic 30.0%
GAAAAGTAAACGTAAAATGC+AGG + chr7_3:71543356-71543375 None:intergenic 30.0%
! CATCGCTTGTATTTGTTAAA+CGG + chr7_3:71543476-71543495 None:intergenic 30.0%
CAGCATAATGTTTCTTATTG+TGG - chr7_3:71543520-71543539 Msa1121500:CDS 30.0%
GAAGAAGGAATTGTGAATAA+TGG + chr7_3:71543653-71543672 None:intergenic 30.0%
GATAATATGATGTATTCCCA+AGG - chr7_3:71543761-71543780 Msa1121500:CDS 30.0%
!! ATTTGAGAAGGTTCTGAAAA+AGG - chr7_3:71544057-71544076 Msa1121500:intron 30.0%
!! GGAAACATTTTCTGTTGTTT+TGG - chr7_3:71544078-71544097 Msa1121500:intron 30.0%
AGTTGCTTATGTAATGACAT+TGG - chr7_3:71544213-71544232 Msa1121500:intron 30.0%
! CTTATGTAATGACATTGGTT+TGG - chr7_3:71544218-71544237 Msa1121500:intron 30.0%
! TTTCTATGCTTATGGCTTTA+TGG - chr7_3:71544398-71544417 Msa1121500:intron 30.0%
!! TTCTATGCTTATGGCTTTAT+GGG - chr7_3:71544399-71544418 Msa1121500:intron 30.0%
!! GTAGCCTTAATTTTCTTTTC+TGG - chr7_3:71544564-71544583 Msa1121500:five_prime_UTR 30.0%
AGAGCCAGAAAAGAAAATTA+AGG + chr7_3:71544571-71544590 None:intergenic 30.0%
AATTGTCAAATTGTGAGTGA+CGG + chr7_3:71542667-71542686 None:intergenic 30.0%
AAAGGTTAAAAGGAACGAAT+AGG + chr7_3:71542694-71542713 None:intergenic 30.0%
TATACCTGTCATGTTGAATT+GGG + chr7_3:71542818-71542837 None:intergenic 30.0%
! TCTCTCTGTTTTCATCTATT+TGG - chr7_3:71542846-71542865 Msa1121500:CDS 30.0%
TGAAATCTGCATAAGCATAA+GGG + chr7_3:71542913-71542932 None:intergenic 30.0%
ATGAAATCTGCATAAGCATA+AGG + chr7_3:71542914-71542933 None:intergenic 30.0%
ACCTAGCAGAAGAATAATAT+TGG + chr7_3:71542977-71542996 None:intergenic 30.0%
! CAAATTTTGGATTTACTGCA+TGG - chr7_3:71543060-71543079 Msa1121500:CDS 30.0%
! TTAACAGCTATATGATGGAA+GGG + chr7_3:71543106-71543125 None:intergenic 30.0%
!!! AAGAGCCAATTTTGGAATTT+CGG + chr7_3:71543311-71543330 None:intergenic 30.0%
GAAAAGTAAACGTAAAATGC+AGG + chr7_3:71543356-71543375 None:intergenic 30.0%
! CATCGCTTGTATTTGTTAAA+CGG + chr7_3:71543476-71543495 None:intergenic 30.0%
CAGCATAATGTTTCTTATTG+TGG - chr7_3:71543520-71543539 Msa1121500:CDS 30.0%
GAAGAAGGAATTGTGAATAA+TGG + chr7_3:71543653-71543672 None:intergenic 30.0%
GATAATATGATGTATTCCCA+AGG - chr7_3:71543761-71543780 Msa1121500:CDS 30.0%
!! ATTTGAGAAGGTTCTGAAAA+AGG - chr7_3:71544057-71544076 Msa1121500:intron 30.0%
!! GGAAACATTTTCTGTTGTTT+TGG - chr7_3:71544078-71544097 Msa1121500:intron 30.0%
AGTTGCTTATGTAATGACAT+TGG - chr7_3:71544213-71544232 Msa1121500:intron 30.0%
! CTTATGTAATGACATTGGTT+TGG - chr7_3:71544218-71544237 Msa1121500:intron 30.0%
! TTTCTATGCTTATGGCTTTA+TGG - chr7_3:71544398-71544417 Msa1121500:intron 30.0%
!! TTCTATGCTTATGGCTTTAT+GGG - chr7_3:71544399-71544418 Msa1121500:intron 30.0%
!! GTAGCCTTAATTTTCTTTTC+TGG - chr7_3:71544564-71544583 Msa1121500:five_prime_UTR 30.0%
AGAGCCAGAAAAGAAAATTA+AGG + chr7_3:71544571-71544590 None:intergenic 30.0%
!! AGTTGATGACCATTACCTTA+CGG + chr7_3:71542612-71542631 None:intergenic 35.0%
GTCATCAACTGTCATCAATT+TGG - chr7_3:71542622-71542641 Msa1121500:three_prime_UTR 35.0%
!! GTTGTTGGTGACGAAAAAAA+AGG + chr7_3:71542712-71542731 None:intergenic 35.0%
GAAGAATAGTGAAGAAGAGA+GGG + chr7_3:71542747-71542766 None:intergenic 35.0%
AGAAGAATAGTGAAGAAGAG+AGG + chr7_3:71542748-71542767 None:intergenic 35.0%
GTATACCTGTCATGTTGAAT+TGG + chr7_3:71542819-71542838 None:intergenic 35.0%
GCCAATATTATTCTTCTGCT+AGG - chr7_3:71542973-71542992 Msa1121500:CDS 35.0%
! GTTAACAGCTATATGATGGA+AGG + chr7_3:71543107-71543126 None:intergenic 35.0%
AGCAGTTAACAGCTATATGA+TGG + chr7_3:71543111-71543130 None:intergenic 35.0%
!! CTTTTCCTTTGATGTTTCTG+TGG - chr7_3:71543370-71543389 Msa1121500:CDS 35.0%
TGTAACCACAGAAACATCAA+AGG + chr7_3:71543378-71543397 None:intergenic 35.0%
ATTGTTCCTGCTATGATCAT+CGG + chr7_3:71543443-71543462 None:intergenic 35.0%
CGTTTAACAAATACAAGCGA+TGG - chr7_3:71543474-71543493 Msa1121500:CDS 35.0%
GAGCATAGTAAAATCTTCCA+AGG + chr7_3:71543565-71543584 None:intergenic 35.0%
! GGAAGATTTTACTATGCTCA+AGG - chr7_3:71543566-71543585 Msa1121500:CDS 35.0%
! AGATTTTACTATGCTCAAGG+TGG - chr7_3:71543569-71543588 Msa1121500:CDS 35.0%
! ATAATGGAATGAGCAAGACT+GGG + chr7_3:71543637-71543656 None:intergenic 35.0%
! AATAATGGAATGAGCAAGAC+TGG + chr7_3:71543638-71543657 None:intergenic 35.0%
AATTCCTTCTTCAACTTCAG+AGG - chr7_3:71543661-71543680 Msa1121500:CDS 35.0%
TATCAAAGCGATGAGTTTGA+TGG + chr7_3:71543711-71543730 None:intergenic 35.0%
ACAAATCAGTGCATATGTAG+AGG + chr7_3:71543804-71543823 None:intergenic 35.0%
AGATAAAGTGAGAATCACAG+TGG + chr7_3:71543903-71543922 None:intergenic 35.0%
! TCTTGCTGTCAATGAAGATT+CGG - chr7_3:71543931-71543950 Msa1121500:intron 35.0%
! GAAATGAAGGGTTTTCAGAA+AGG - chr7_3:71544187-71544206 Msa1121500:intron 35.0%
TGTTATCAGTACTGTCTCTT+TGG - chr7_3:71544315-71544334 Msa1121500:intron 35.0%
AAAACTATAACAGCGGCAAT+AGG + chr7_3:71544349-71544368 None:intergenic 35.0%
!! TCTATGCTTATGGCTTTATG+GGG - chr7_3:71544400-71544419 Msa1121500:intron 35.0%
AATTAAGGCTACTTGAGCAA+AGG + chr7_3:71544556-71544575 None:intergenic 35.0%
!!! TTTTCTGGCTCTATATCCTT+AGG - chr7_3:71544579-71544598 Msa1121500:five_prime_UTR 35.0%
AATGAGCTAGTATAGATACG+AGG - chr7_3:71544651-71544670 Msa1121500:five_prime_UTR 35.0%
TAGTATAGATACGAGGTTCT+TGG - chr7_3:71544658-71544677 Msa1121500:five_prime_UTR 35.0%
!! AGTTGATGACCATTACCTTA+CGG + chr7_3:71542612-71542631 None:intergenic 35.0%
GTCATCAACTGTCATCAATT+TGG - chr7_3:71542622-71542641 Msa1121500:three_prime_UTR 35.0%
!! GTTGTTGGTGACGAAAAAAA+AGG + chr7_3:71542712-71542731 None:intergenic 35.0%
GAAGAATAGTGAAGAAGAGA+GGG + chr7_3:71542747-71542766 None:intergenic 35.0%
AGAAGAATAGTGAAGAAGAG+AGG + chr7_3:71542748-71542767 None:intergenic 35.0%
GTATACCTGTCATGTTGAAT+TGG + chr7_3:71542819-71542838 None:intergenic 35.0%
GCCAATATTATTCTTCTGCT+AGG - chr7_3:71542973-71542992 Msa1121500:CDS 35.0%
! GTTAACAGCTATATGATGGA+AGG + chr7_3:71543107-71543126 None:intergenic 35.0%
AGCAGTTAACAGCTATATGA+TGG + chr7_3:71543111-71543130 None:intergenic 35.0%
!! CTTTTCCTTTGATGTTTCTG+TGG - chr7_3:71543370-71543389 Msa1121500:CDS 35.0%
TGTAACCACAGAAACATCAA+AGG + chr7_3:71543378-71543397 None:intergenic 35.0%
ATTGTTCCTGCTATGATCAT+CGG + chr7_3:71543443-71543462 None:intergenic 35.0%
CGTTTAACAAATACAAGCGA+TGG - chr7_3:71543474-71543493 Msa1121500:CDS 35.0%
GAGCATAGTAAAATCTTCCA+AGG + chr7_3:71543565-71543584 None:intergenic 35.0%
! GGAAGATTTTACTATGCTCA+AGG - chr7_3:71543566-71543585 Msa1121500:CDS 35.0%
! AGATTTTACTATGCTCAAGG+TGG - chr7_3:71543569-71543588 Msa1121500:CDS 35.0%
! ATAATGGAATGAGCAAGACT+GGG + chr7_3:71543637-71543656 None:intergenic 35.0%
! AATAATGGAATGAGCAAGAC+TGG + chr7_3:71543638-71543657 None:intergenic 35.0%
AATTCCTTCTTCAACTTCAG+AGG - chr7_3:71543661-71543680 Msa1121500:CDS 35.0%
TATCAAAGCGATGAGTTTGA+TGG + chr7_3:71543711-71543730 None:intergenic 35.0%
ACAAATCAGTGCATATGTAG+AGG + chr7_3:71543804-71543823 None:intergenic 35.0%
AGATAAAGTGAGAATCACAG+TGG + chr7_3:71543903-71543922 None:intergenic 35.0%
! TCTTGCTGTCAATGAAGATT+CGG - chr7_3:71543931-71543950 Msa1121500:intron 35.0%
! GAAATGAAGGGTTTTCAGAA+AGG - chr7_3:71544187-71544206 Msa1121500:intron 35.0%
TGTTATCAGTACTGTCTCTT+TGG - chr7_3:71544315-71544334 Msa1121500:intron 35.0%
AAAACTATAACAGCGGCAAT+AGG + chr7_3:71544349-71544368 None:intergenic 35.0%
!! TCTATGCTTATGGCTTTATG+GGG - chr7_3:71544400-71544419 Msa1121500:intron 35.0%
AATTAAGGCTACTTGAGCAA+AGG + chr7_3:71544556-71544575 None:intergenic 35.0%
!!! TTTTCTGGCTCTATATCCTT+AGG - chr7_3:71544579-71544598 Msa1121500:five_prime_UTR 35.0%
AATGAGCTAGTATAGATACG+AGG - chr7_3:71544651-71544670 Msa1121500:five_prime_UTR 35.0%
TAGTATAGATACGAGGTTCT+TGG - chr7_3:71544658-71544677 Msa1121500:five_prime_UTR 35.0%
!! GTTGATGACCATTACCTTAC+GGG + chr7_3:71542611-71542630 None:intergenic 40.0%
CATACCCAATTCAACATGAC+AGG - chr7_3:71542811-71542830 Msa1121500:CDS 40.0%
ATGAAAACAGAGAGAGAGAG+GGG + chr7_3:71542841-71542860 None:intergenic 40.0%
GATGAAAACAGAGAGAGAGA+GGG + chr7_3:71542842-71542861 None:intergenic 40.0%
AGATGAAAACAGAGAGAGAG+AGG + chr7_3:71542843-71542862 None:intergenic 40.0%
! AAGGTCGAAAGAGCCAATTT+TGG + chr7_3:71543319-71543338 None:intergenic 40.0%
GCAGGACAGAGATAAACTAA+AGG + chr7_3:71543338-71543357 None:intergenic 40.0%
ACAAATACAAGCGATGGCAA+TGG - chr7_3:71543480-71543499 Msa1121500:CDS 40.0%
CTCAAGGTGGAAATAGTACA+TGG - chr7_3:71543582-71543601 Msa1121500:CDS 40.0%
AGGTGGAAATAGTACATGGA+TGG - chr7_3:71543586-71543605 Msa1121500:CDS 40.0%
AAAGCGATGAGTTTGATGGA+AGG + chr7_3:71543707-71543726 None:intergenic 40.0%
! AGAGAGGTACAAAAGTCCTT+GGG + chr7_3:71543780-71543799 None:intergenic 40.0%
! CAACAACGTATTTTCCCTTC+GGG + chr7_3:71543973-71543992 None:intergenic 40.0%
! CCAACAACGTATTTTCCCTT+CGG + chr7_3:71543974-71543993 None:intergenic 40.0%
! GTTGGTTTCCTATGTACACT+TGG - chr7_3:71543989-71544008 Msa1121500:intron 40.0%
CTCAAATGTCAGTTGCATGA+GGG + chr7_3:71544044-71544063 None:intergenic 40.0%
TCTCAAATGTCAGTTGCATG+AGG + chr7_3:71544045-71544064 None:intergenic 40.0%
CATGCAACTGACATTTGAGA+AGG - chr7_3:71544045-71544064 Msa1121500:intron 40.0%
ACTTGCAAATAGGCCTATTG+TGG + chr7_3:71544143-71544162 None:intergenic 40.0%
ACAATAGGCCTATTTGCAAG+TGG - chr7_3:71544142-71544161 Msa1121500:intron 40.0%
! TAGTTTGCACGGAGAAATGA+AGG - chr7_3:71544174-71544193 Msa1121500:intron 40.0%
AGTTTGCACGGAGAAATGAA+GGG - chr7_3:71544175-71544194 Msa1121500:intron 40.0%
TTGAGTAGAGAGAAGACACT+AGG + chr7_3:71544294-71544313 None:intergenic 40.0%
CAACATGAAGATTCATTGCG+AGG + chr7_3:71544499-71544518 None:intergenic 40.0%
!! GTTGATGACCATTACCTTAC+GGG + chr7_3:71542611-71542630 None:intergenic 40.0%
CATACCCAATTCAACATGAC+AGG - chr7_3:71542811-71542830 Msa1121500:CDS 40.0%
ATGAAAACAGAGAGAGAGAG+GGG + chr7_3:71542841-71542860 None:intergenic 40.0%
GATGAAAACAGAGAGAGAGA+GGG + chr7_3:71542842-71542861 None:intergenic 40.0%
AGATGAAAACAGAGAGAGAG+AGG + chr7_3:71542843-71542862 None:intergenic 40.0%
! AAGGTCGAAAGAGCCAATTT+TGG + chr7_3:71543319-71543338 None:intergenic 40.0%
GCAGGACAGAGATAAACTAA+AGG + chr7_3:71543338-71543357 None:intergenic 40.0%
ACAAATACAAGCGATGGCAA+TGG - chr7_3:71543480-71543499 Msa1121500:CDS 40.0%
CTCAAGGTGGAAATAGTACA+TGG - chr7_3:71543582-71543601 Msa1121500:CDS 40.0%
AGGTGGAAATAGTACATGGA+TGG - chr7_3:71543586-71543605 Msa1121500:CDS 40.0%
AAAGCGATGAGTTTGATGGA+AGG + chr7_3:71543707-71543726 None:intergenic 40.0%
! AGAGAGGTACAAAAGTCCTT+GGG + chr7_3:71543780-71543799 None:intergenic 40.0%
! CAACAACGTATTTTCCCTTC+GGG + chr7_3:71543973-71543992 None:intergenic 40.0%
! CCAACAACGTATTTTCCCTT+CGG + chr7_3:71543974-71543993 None:intergenic 40.0%
! GTTGGTTTCCTATGTACACT+TGG - chr7_3:71543989-71544008 Msa1121500:intron 40.0%
CTCAAATGTCAGTTGCATGA+GGG + chr7_3:71544044-71544063 None:intergenic 40.0%
TCTCAAATGTCAGTTGCATG+AGG + chr7_3:71544045-71544064 None:intergenic 40.0%
CATGCAACTGACATTTGAGA+AGG - chr7_3:71544045-71544064 Msa1121500:intron 40.0%
ACTTGCAAATAGGCCTATTG+TGG + chr7_3:71544143-71544162 None:intergenic 40.0%
ACAATAGGCCTATTTGCAAG+TGG - chr7_3:71544142-71544161 Msa1121500:intron 40.0%
! TAGTTTGCACGGAGAAATGA+AGG - chr7_3:71544174-71544193 Msa1121500:intron 40.0%
AGTTTGCACGGAGAAATGAA+GGG - chr7_3:71544175-71544194 Msa1121500:intron 40.0%
TTGAGTAGAGAGAAGACACT+AGG + chr7_3:71544294-71544313 None:intergenic 40.0%
CAACATGAAGATTCATTGCG+AGG + chr7_3:71544499-71544518 None:intergenic 40.0%
ATTACCTTACGGGCTCAGAA+TGG + chr7_3:71542601-71542620 None:intergenic 45.0%
ATTCTGAGCCCGTAAGGTAA+TGG - chr7_3:71542600-71542619 Msa1121500:three_prime_UTR 45.0%
AAATTGTGAGTGACGGCTTC+GGG + chr7_3:71542660-71542679 None:intergenic 45.0%
CAAATTGTGAGTGACGGCTT+CGG + chr7_3:71542661-71542680 None:intergenic 45.0%
GGGTTGAAGAATGTCGTTGT+TGG + chr7_3:71542727-71542746 None:intergenic 45.0%
! CAGCTATATGATGGAAGGGT+GGG + chr7_3:71543102-71543121 None:intergenic 45.0%
! ACAGCTATATGATGGAAGGG+TGG + chr7_3:71543103-71543122 None:intergenic 45.0%
GAAGAACCGATGATCATAGC+AGG - chr7_3:71543434-71543453 Msa1121500:CDS 45.0%
AATACAAGCGATGGCAATGG+TGG - chr7_3:71543483-71543502 Msa1121500:CDS 45.0%
CAATCTGCTGCAGTTATCCT+TGG - chr7_3:71543545-71543564 Msa1121500:CDS 45.0%
AGACTGGGAAGGCAATAGTT+TGG + chr7_3:71543622-71543641 None:intergenic 45.0%
!! GAAGCCTCTGAAGTTGAAGA+AGG + chr7_3:71543668-71543687 None:intergenic 45.0%
! CAGAGAGGTACAAAAGTCCT+TGG + chr7_3:71543781-71543800 None:intergenic 45.0%
CCGAAGGGAAAATACGTTGT+TGG - chr7_3:71543971-71543990 Msa1121500:intron 45.0%
CAGAAGCTCCAAGTGTACAT+AGG + chr7_3:71544000-71544019 None:intergenic 45.0%
GCAACTTGTGCTTCCACAAT+AGG - chr7_3:71544127-71544146 Msa1121500:intron 45.0%
GCCTATTTGCAAGTGGTGAA+TGG - chr7_3:71544149-71544168 Msa1121500:intron 45.0%
GCCATTCACCACTTGCAAAT+AGG + chr7_3:71544153-71544172 None:intergenic 45.0%
! GGTGAATGGCATAGTTTGCA+CGG - chr7_3:71544163-71544182 Msa1121500:intron 45.0%
! TGGTTTGGACAGCAATAGCA+TGG - chr7_3:71544233-71544252 Msa1121500:intron 45.0%
AATCAAGCCAACCACACCAA+CGG + chr7_3:71544269-71544288 None:intergenic 45.0%
! CTTGAGCAAAGGCATGTTAC+TGG + chr7_3:71544545-71544564 None:intergenic 45.0%
ATTACCTTACGGGCTCAGAA+TGG + chr7_3:71542601-71542620 None:intergenic 45.0%
ATTCTGAGCCCGTAAGGTAA+TGG - chr7_3:71542600-71542619 Msa1121500:three_prime_UTR 45.0%
AAATTGTGAGTGACGGCTTC+GGG + chr7_3:71542660-71542679 None:intergenic 45.0%
CAAATTGTGAGTGACGGCTT+CGG + chr7_3:71542661-71542680 None:intergenic 45.0%
GGGTTGAAGAATGTCGTTGT+TGG + chr7_3:71542727-71542746 None:intergenic 45.0%
! CAGCTATATGATGGAAGGGT+GGG + chr7_3:71543102-71543121 None:intergenic 45.0%
! ACAGCTATATGATGGAAGGG+TGG + chr7_3:71543103-71543122 None:intergenic 45.0%
GAAGAACCGATGATCATAGC+AGG - chr7_3:71543434-71543453 Msa1121500:CDS 45.0%
AATACAAGCGATGGCAATGG+TGG - chr7_3:71543483-71543502 Msa1121500:CDS 45.0%
CAATCTGCTGCAGTTATCCT+TGG - chr7_3:71543545-71543564 Msa1121500:CDS 45.0%
AGACTGGGAAGGCAATAGTT+TGG + chr7_3:71543622-71543641 None:intergenic 45.0%
!! GAAGCCTCTGAAGTTGAAGA+AGG + chr7_3:71543668-71543687 None:intergenic 45.0%
! CAGAGAGGTACAAAAGTCCT+TGG + chr7_3:71543781-71543800 None:intergenic 45.0%
CCGAAGGGAAAATACGTTGT+TGG - chr7_3:71543971-71543990 Msa1121500:intron 45.0%
CAGAAGCTCCAAGTGTACAT+AGG + chr7_3:71544000-71544019 None:intergenic 45.0%
GCAACTTGTGCTTCCACAAT+AGG - chr7_3:71544127-71544146 Msa1121500:intron 45.0%
GCCTATTTGCAAGTGGTGAA+TGG - chr7_3:71544149-71544168 Msa1121500:intron 45.0%
GCCATTCACCACTTGCAAAT+AGG + chr7_3:71544153-71544172 None:intergenic 45.0%
! GGTGAATGGCATAGTTTGCA+CGG - chr7_3:71544163-71544182 Msa1121500:intron 45.0%
! TGGTTTGGACAGCAATAGCA+TGG - chr7_3:71544233-71544252 Msa1121500:intron 45.0%
AATCAAGCCAACCACACCAA+CGG + chr7_3:71544269-71544288 None:intergenic 45.0%
! CTTGAGCAAAGGCATGTTAC+TGG + chr7_3:71544545-71544564 None:intergenic 45.0%
AATTGTGAGTGACGGCTTCG+GGG + chr7_3:71542659-71542678 None:intergenic 50.0%
! ATGGCAATGGTGGTTTCTGG+TGG - chr7_3:71543493-71543512 Msa1121500:CDS 50.0%
!! TGGCAATGGTGGTTTCTGGT+GGG - chr7_3:71543494-71543513 Msa1121500:CDS 50.0%
TGGAATGAGCAAGACTGGGA+AGG + chr7_3:71543633-71543652 None:intergenic 50.0%
GCGATGAGTTTGATGGAAGG+TGG + chr7_3:71543704-71543723 None:intergenic 50.0%
GTGCATATGTAGAGGCAGAG+AGG + chr7_3:71543796-71543815 None:intergenic 50.0%
GAAGATTCGGACACACCTTC+TGG - chr7_3:71543944-71543963 Msa1121500:intron 50.0%
ACACCTTCTGGTATCCCGAA+GGG - chr7_3:71543956-71543975 Msa1121500:intron 50.0%
TTTCCCTTCGGGATACCAGA+AGG + chr7_3:71543962-71543981 None:intergenic 50.0%
TTGGACAGCAATAGCATGGC+AGG - chr7_3:71544237-71544256 Msa1121500:intron 50.0%
GTTTGTTCCGTTGGTGTGGT+TGG - chr7_3:71544259-71544278 Msa1121500:intron 50.0%
AGCTAGCAGTACTGCACCTA+AGG + chr7_3:71544598-71544617 None:intergenic 50.0%
AATTGTGAGTGACGGCTTCG+GGG + chr7_3:71542659-71542678 None:intergenic 50.0%
! ATGGCAATGGTGGTTTCTGG+TGG - chr7_3:71543493-71543512 Msa1121500:CDS 50.0%
!! TGGCAATGGTGGTTTCTGGT+GGG - chr7_3:71543494-71543513 Msa1121500:CDS 50.0%
TGGAATGAGCAAGACTGGGA+AGG + chr7_3:71543633-71543652 None:intergenic 50.0%
GCGATGAGTTTGATGGAAGG+TGG + chr7_3:71543704-71543723 None:intergenic 50.0%
GTGCATATGTAGAGGCAGAG+AGG + chr7_3:71543796-71543815 None:intergenic 50.0%
GAAGATTCGGACACACCTTC+TGG - chr7_3:71543944-71543963 Msa1121500:intron 50.0%
ACACCTTCTGGTATCCCGAA+GGG - chr7_3:71543956-71543975 Msa1121500:intron 50.0%
TTTCCCTTCGGGATACCAGA+AGG + chr7_3:71543962-71543981 None:intergenic 50.0%
TTGGACAGCAATAGCATGGC+AGG - chr7_3:71544237-71544256 Msa1121500:intron 50.0%
GTTTGTTCCGTTGGTGTGGT+TGG - chr7_3:71544259-71544278 Msa1121500:intron 50.0%
AGCTAGCAGTACTGCACCTA+AGG + chr7_3:71544598-71544617 None:intergenic 50.0%
CACACCATTCTGAGCCCGTA+AGG - chr7_3:71542594-71542613 Msa1121500:three_prime_UTR 55.0%
ATTGTGAGTGACGGCTTCGG+GGG + chr7_3:71542658-71542677 None:intergenic 55.0%
GCGATGGCAATGGTGGTTTC+TGG - chr7_3:71543490-71543509 Msa1121500:CDS 55.0%
CACACCTTCTGGTATCCCGA+AGG - chr7_3:71543955-71543974 Msa1121500:intron 55.0%
! GCATGGCAGGTTTGTTCCGT+TGG - chr7_3:71544250-71544269 Msa1121500:intron 55.0%
! GCAGGTTTGTTCCGTTGGTG+TGG - chr7_3:71544255-71544274 Msa1121500:intron 55.0%
AAGGCAAGACGTGCACAAGC+TGG - chr7_3:71544463-71544482 Msa1121500:five_prime_UTR 55.0%
CACACCATTCTGAGCCCGTA+AGG - chr7_3:71542594-71542613 Msa1121500:three_prime_UTR 55.0%
ATTGTGAGTGACGGCTTCGG+GGG + chr7_3:71542658-71542677 None:intergenic 55.0%
GCGATGGCAATGGTGGTTTC+TGG - chr7_3:71543490-71543509 Msa1121500:CDS 55.0%
CACACCTTCTGGTATCCCGA+AGG - chr7_3:71543955-71543974 Msa1121500:intron 55.0%
! GCATGGCAGGTTTGTTCCGT+TGG - chr7_3:71544250-71544269 Msa1121500:intron 55.0%
! GCAGGTTTGTTCCGTTGGTG+TGG - chr7_3:71544255-71544274 Msa1121500:intron 55.0%
AAGGCAAGACGTGCACAAGC+TGG - chr7_3:71544463-71544482 Msa1121500:five_prime_UTR 55.0%
TTGTGAGTGACGGCTTCGGG+GGG + chr7_3:71542657-71542676 None:intergenic 60.0%
TTGTGAGTGACGGCTTCGGG+GGG + chr7_3:71542657-71542676 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 71542578 71544703 71542578 ID=Msa1121500;Name=Msa1121500
chr7_3 mRNA 71542578 71544703 71542578 ID=Msa1121500-mRNA-1;Parent=Msa1121500;Name=Msa1121500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=248|1|1|1|0|0|2|184|365
chr7_3 exon 71542578 71543852 71542578 ID=Msa1121500-mRNA-1:exon:18315;Parent=Msa1121500-mRNA-1
chr7_3 exon 71544449 71544703 71544449 ID=Msa1121500-mRNA-1:exon:18314;Parent=Msa1121500-mRNA-1
chr7_3 five_prime_UTR 71544456 71544703 71544456 ID=Msa1121500-mRNA-1:five_prime_utr;Parent=Msa1121500-mRNA-1
chr7_3 CDS 71544449 71544455 71544449 ID=Msa1121500-mRNA-1:cds;Parent=Msa1121500-mRNA-1
chr7_3 CDS 71542762 71543852 71542762 ID=Msa1121500-mRNA-1:cds;Parent=Msa1121500-mRNA-1
chr7_3 three_prime_UTR 71542578 71542761 71542578 ID=Msa1121500-mRNA-1:three_prime_utr;Parent=Msa1121500-mRNA-1
Gene Sequence

>Msa1121500

ATGACAGATAATGAAGAACCGATGATCATAGCAGGAACAATTAATGAACTACCGTTTAACAAATACAAGCGATGGCAATGGTGGTTTCTGGTGGGACTCAGCATAATGTTTCTTATTGTGGGACAATCTGCTGCAGTTATCCTTGGAAGATTTTACTATGCTCAAGGTGGAAATAGTACATGGATGGCTACTTTAGTCCAAACTATTGCCTTCCCAGTCTTGCTCATTCCATTATTCACAATTCCTTCTTCAACTTCAGAGGCTTCAACTTCTTCTGTTCCACCTTCCATCAAACTCATCGCTTTGATATATTTTGTTCTTGGAATCATGATTGCTGCTGATAATATGATGTATTCCCAAGGACTTTTGTACCTCTCTGCCTCTACATATGCACTGATTTGTGCATCTCAGTTAGCTTTCAATGCAATTTTCTCGTATTTTATCAACTCTCAAAAGTTCACTGCTTTGATTATAAACTCCACTGTGATTCTCACTTTATCTTCTTCACTTCTTGCTGTCAATGAAGATTCGGACACACCTTCTGGTATCCCGAAGGGAAAATACGTTGTTGGTTTCCTATGTACACTTGGAGCTTCTGCACTTTACTCTCTTTTGCTTTCCCTCATGCAACTGACATTTGAGAAGGTTCTGAAAAAGGAAACATTTTCTGTTGTTTTGGAAATGCAAATCTATACTTCACTTGTCGCAACTTGTGCTTCCACAATAGGCCTATTTGCAAGTGGTGAATGGCATAGTTTGCACGGAGAAATGAAGGGTTTTCAGAAAGGAGAAGTTGCTTATGTAATGACATTGGTTTGGACAGCAATAGCATGGCAGGTTTGTTCCGTTGGTGTGGTTGGCTTGATTTTCCTAGTGTCTTCTCTCTACTCAAATGTTATCAGTACTGTCTCTTTGGCTATAACTCCTATTGCCGCTGTTATAGTTTTTCATGATAAGATGAATGGGGTGAAGATAATTTCTATGCTTATGGCTTTATGGGGTTTTGCTTCCTACATCTATCAAAACTATCTTGATGATTTAAAGGCAAGACGTGCACAAGCTGGCACTTCTAAGCCTCGCAATGAATCTTCATGTTGA
Protein sequence

>Msa1121500

MTDNEEPMIIAGTINELPFNKYKRWQWWFLVGLSIMFLIVGQSAAVILGRFYYAQGGNSTWMATLVQTIAFPVLLIPLFTIPSSTSEASTSSVPPSIKLIALIYFVLGIMIAADNMMYSQGLLYLSASTYALICASQLAFNAIFSYFINSQKFTALIINSTVILTLSSSLLAVNEDSDTPSGIPKGKYVVGFLCTLGASALYSLLLSLMQLTFEKVLKKETFSVVLEMQIYTSLVATCASTIGLFASGEWHSLHGEMKGFQKGEVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAITPIAAVIVFHDKMNGVKIISMLMALWGFASYIYQNYLDDLKARRAQAGTSKPRNESSC*