Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1376930 | KEH20777.1 | 96.970 | 330 | 6 | 1 | 1 | 330 | 1 | 326 | 0.0 | 647 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1376930 | sp|Q8L936|CAP16_ARATH | 48.864 | 352 | 154 | 9 | 1 | 329 | 1 | 349 | 5.16e-97 | 294 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1376930 | A0A072TTL4 | 96.970 | 330 | 6 | 1 | 1 | 330 | 1 | 326 | 0.0 | 647 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026450 | Msa1376930 | 0.802015 | 6.855667e-49 | -8.615850e-47 |
Msa0029850 | Msa1376930 | 0.867962 | 9.291302e-66 | -8.615850e-47 |
Msa0042550 | Msa1376930 | 0.819041 | 1.429836e-52 | -8.615850e-47 |
Msa0050380 | Msa1376930 | 0.800851 | 1.187309e-48 | -8.615850e-47 |
Msa0052030 | Msa1376930 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
Msa0057520 | Msa1376930 | 0.805295 | 1.430271e-49 | -8.615850e-47 |
Msa0075470 | Msa1376930 | 0.802484 | 5.488731e-49 | -8.615850e-47 |
Msa0076700 | Msa1376930 | 0.824731 | 6.884179e-54 | -8.615850e-47 |
Msa0077180 | Msa1376930 | 0.842992 | 1.842147e-58 | -8.615850e-47 |
Msa0085290 | Msa1376930 | 0.809050 | 2.291648e-50 | -8.615850e-47 |
Msa0085720 | Msa1376930 | 0.810756 | 9.838890e-51 | -8.615850e-47 |
Msa0090390 | Msa1376930 | 0.800481 | 1.412505e-48 | -8.615850e-47 |
Msa0102120 | Msa1376930 | 0.813585 | 2.376326e-51 | -8.615850e-47 |
Msa1359920 | Msa1376930 | 0.803832 | 2.887851e-49 | -8.615850e-47 |
Msa1372150 | Msa1376930 | 0.833960 | 3.949272e-56 | -8.615850e-47 |
Msa1373350 | Msa1376930 | 0.815114 | 1.091054e-51 | -8.615850e-47 |
Msa1376160 | Msa1376930 | -0.809097 | 2.239587e-50 | -8.615850e-47 |
Msa1376930 | Msa1378230 | 0.806682 | 7.305544e-50 | -8.615850e-47 |
Msa1376930 | Msa1378940 | 0.817026 | 4.081452e-52 | -8.615850e-47 |
Msa1376930 | Msa1379850 | 0.808405 | 3.147512e-50 | -8.615850e-47 |
Msa1376930 | Msa1385020 | 0.837761 | 4.296328e-57 | -8.615850e-47 |
Msa1376930 | Msa1392260 | 0.809968 | 1.455488e-50 | -8.615850e-47 |
Msa1376930 | Msa1393040 | 0.823167 | 1.602261e-53 | -8.615850e-47 |
Msa1376930 | Msa1394310 | 0.804980 | 1.664349e-49 | -8.615850e-47 |
Msa1376930 | Msa1397120 | 0.826232 | 3.036754e-54 | -8.615850e-47 |
Msa1376930 | Msa1398890 | 0.827043 | 1.945543e-54 | -8.615850e-47 |
Msa1376930 | Msa1403890 | 0.820383 | 7.060902e-53 | -8.615850e-47 |
Msa1376930 | Msa1407600 | 0.833688 | 4.619331e-56 | -8.615850e-47 |
Msa1376930 | Msa1420270 | 0.806185 | 9.299243e-50 | -8.615850e-47 |
Msa1376930 | Msa1423820 | 0.858511 | 7.834240e-63 | -8.615850e-47 |
Msa1376930 | Msa1424630 | 0.812666 | 3.780050e-51 | -8.615850e-47 |
Msa1376930 | Msa1440940 | 0.801318 | 9.527513e-49 | -8.615850e-47 |
Msa1376930 | Msa1444250 | -0.822924 | 1.825660e-53 | -8.615850e-47 |
Msa1376930 | Msa1444260 | 0.800646 | 1.307408e-48 | -8.615850e-47 |
Msa1376930 | Msa1445030 | 0.818153 | 2.273749e-52 | -8.615850e-47 |
Msa1376930 | Msa1451620 | -0.865873 | 4.305650e-65 | -8.615850e-47 |
Msa1376930 | Msa1459050 | 0.801183 | 1.015219e-48 | -8.615850e-47 |
Msa1376930 | Msa1461810 | -0.823938 | 1.057804e-53 | -8.615850e-47 |
Msa1376930 | Msa1466730 | 0.804856 | 1.766741e-49 | -8.615850e-47 |
Msa0603370 | Msa1376930 | 0.805125 | 1.552035e-49 | -8.615850e-47 |
Msa0606750 | Msa1376930 | 0.801694 | 7.980526e-49 | -8.615850e-47 |
Msa0607540 | Msa1376930 | 0.806430 | 8.257346e-50 | -8.615850e-47 |
Msa0613460 | Msa1376930 | 0.842730 | 2.163092e-58 | -8.615850e-47 |
Msa0615340 | Msa1376930 | 0.824497 | 7.818453e-54 | -8.615850e-47 |
Msa0622170 | Msa1376930 | -0.822920 | 1.829365e-53 | -8.615850e-47 |
Msa0626990 | Msa1376930 | 0.844312 | 8.171692e-59 | -8.615850e-47 |
Msa0627350 | Msa1376930 | 0.846792 | 1.738475e-59 | -8.615850e-47 |
Msa0644400 | Msa1376930 | 0.813360 | 2.662863e-51 | -8.615850e-47 |
Msa0647830 | Msa1376930 | 0.820166 | 7.915983e-53 | -8.615850e-47 |
Msa0654010 | Msa1376930 | 0.815659 | 8.253316e-52 | -8.615850e-47 |
Msa0658570 | Msa1376930 | 0.805690 | 1.182033e-49 | -8.615850e-47 |
Msa0662570 | Msa1376930 | 0.826288 | 2.945567e-54 | -8.615850e-47 |
Msa0679550 | Msa1376930 | 0.826260 | 2.990308e-54 | -8.615850e-47 |
Msa0688070 | Msa1376930 | 0.817691 | 2.891693e-52 | -8.615850e-47 |
Msa0690440 | Msa1376930 | 0.820406 | 6.977250e-53 | -8.615850e-47 |
Msa0693380 | Msa1376930 | 0.802352 | 5.843940e-49 | -8.615850e-47 |
Msa0698360 | Msa1376930 | 0.800879 | 1.171675e-48 | -8.615850e-47 |
Msa0715410 | Msa1376930 | 0.807173 | 5.753489e-50 | -8.615850e-47 |
Msa0715470 | Msa1376930 | 0.808649 | 2.792045e-50 | -8.615850e-47 |
Msa0731180 | Msa1376930 | 0.852593 | 4.170295e-61 | -8.615850e-47 |
Msa0731940 | Msa1376930 | 0.801368 | 9.304096e-49 | -8.615850e-47 |
Msa0744170 | Msa1376930 | -0.825927 | 3.589680e-54 | -8.615850e-47 |
Msa0766630 | Msa1376930 | 0.822234 | 2.642441e-53 | -8.615850e-47 |
Msa0771580 | Msa1376930 | 0.825058 | 5.766511e-54 | -8.615850e-47 |
Msa0790680 | Msa1376930 | 0.830079 | 3.593536e-55 | -8.615850e-47 |
Msa0801740 | Msa1376930 | 0.814306 | 1.647962e-51 | -8.615850e-47 |
Msa0807030 | Msa1376930 | 0.804326 | 2.278882e-49 | -8.615850e-47 |
Msa0810220 | Msa1376930 | 0.805625 | 1.219585e-49 | -8.615850e-47 |
Msa0818110 | Msa1376930 | 0.803847 | 2.866612e-49 | -8.615850e-47 |
Msa0125050 | Msa1376930 | 0.836938 | 6.978075e-57 | -8.615850e-47 |
Msa0130970 | Msa1376930 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
Msa0131770 | Msa1376930 | 0.812431 | 4.253578e-51 | -8.615850e-47 |
Msa0133980 | Msa1376930 | -0.804093 | 2.549073e-49 | -8.615850e-47 |
Msa0137870 | Msa1376930 | 0.808668 | 2.765597e-50 | -8.615850e-47 |
Msa0145260 | Msa1376930 | 0.806921 | 6.503531e-50 | -8.615850e-47 |
Msa0153830 | Msa1376930 | 0.802739 | 4.862924e-49 | -8.615850e-47 |
Msa0169820 | Msa1376930 | 0.871777 | 5.275929e-67 | -8.615850e-47 |
Msa0170140 | Msa1376930 | 0.800289 | 1.545367e-48 | -8.615850e-47 |
Msa0175050 | Msa1376930 | 0.813650 | 2.299291e-51 | -8.615850e-47 |
Msa0178510 | Msa1376930 | 0.838357 | 3.017665e-57 | -8.615850e-47 |
Msa0178860 | Msa1376930 | -0.818194 | 2.226510e-52 | -8.615850e-47 |
Msa0178930 | Msa1376930 | 0.827566 | 1.457420e-54 | -8.615850e-47 |
Msa0183010 | Msa1376930 | -0.851766 | 7.167550e-61 | -8.615850e-47 |
Msa0187250 | Msa1376930 | 0.807747 | 4.346973e-50 | -8.615850e-47 |
Msa0187830 | Msa1376930 | 0.827710 | 1.346031e-54 | -8.615850e-47 |
Msa0199800 | Msa1376930 | -0.853050 | 3.086273e-61 | -8.615850e-47 |
Msa0218050 | Msa1376930 | 0.801093 | 1.059226e-48 | -8.615850e-47 |
Msa0226180 | Msa1376930 | 0.804362 | 2.240119e-49 | -8.615850e-47 |
Msa0230640 | Msa1376930 | -0.860267 | 2.326764e-63 | -8.615850e-47 |
Msa0233300 | Msa1376930 | 0.809516 | 1.821019e-50 | -8.615850e-47 |
Msa0235880 | Msa1376930 | 0.810919 | 9.072028e-51 | -8.615850e-47 |
Msa1224580 | Msa1376930 | -0.837306 | 5.619030e-57 | -8.615850e-47 |
Msa1228160 | Msa1376930 | -0.812979 | 3.227150e-51 | -8.615850e-47 |
Msa1230830 | Msa1376930 | 0.810151 | 1.329442e-50 | -8.615850e-47 |
Msa1235400 | Msa1376930 | 0.833248 | 5.947783e-56 | -8.615850e-47 |
Msa1241570 | Msa1376930 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
Msa1243100 | Msa1376930 | 0.829437 | 5.151079e-55 | -8.615850e-47 |
Msa1255060 | Msa1376930 | 0.849884 | 2.427484e-60 | -8.615850e-47 |
Msa1256410 | Msa1376930 | 0.813617 | 2.338343e-51 | -8.615850e-47 |
Msa1257800 | Msa1376930 | -0.831710 | 1.430493e-55 | -8.615850e-47 |
Msa1258380 | Msa1376930 | -0.816652 | 4.952021e-52 | -8.615850e-47 |
Msa1263290 | Msa1376930 | -0.822372 | 2.453266e-53 | -8.615850e-47 |
Msa1264860 | Msa1376930 | -0.803455 | 3.457078e-49 | -8.615850e-47 |
Msa1268880 | Msa1376930 | 0.801366 | 9.313399e-49 | -8.615850e-47 |
Msa1270660 | Msa1376930 | 0.828429 | 9.037487e-55 | -8.615850e-47 |
Msa1270730 | Msa1376930 | 0.845445 | 4.043196e-59 | -8.615850e-47 |
Msa1276440 | Msa1376930 | 0.815033 | 1.137497e-51 | -8.615850e-47 |
Msa1295510 | Msa1376930 | 0.833203 | 6.104470e-56 | -8.615850e-47 |
Msa1297310 | Msa1376930 | 0.838781 | 2.345519e-57 | -8.615850e-47 |
Msa1304890 | Msa1376930 | -0.830055 | 3.642164e-55 | -8.615850e-47 |
Msa1305190 | Msa1376930 | 0.804764 | 1.847018e-49 | -8.615850e-47 |
Msa1307740 | Msa1376930 | 0.817249 | 3.637531e-52 | -8.615850e-47 |
Msa1314770 | Msa1376930 | 0.820940 | 5.257715e-53 | -8.615850e-47 |
Msa1333730 | Msa1376930 | 0.804726 | 1.880858e-49 | -8.615850e-47 |
Msa1335230 | Msa1376930 | 0.852000 | 6.149809e-61 | -8.615850e-47 |
Msa1343250 | Msa1376930 | 0.819151 | 1.350216e-52 | -8.615850e-47 |
Msa0365490 | Msa1376930 | 0.812640 | 3.830256e-51 | -8.615850e-47 |
Msa0371730 | Msa1376930 | 0.801608 | 8.310763e-49 | -8.615850e-47 |
Msa0376590 | Msa1376930 | 0.830354 | 3.079684e-55 | -8.615850e-47 |
Msa0376910 | Msa1376930 | 0.816644 | 4.973103e-52 | -8.615850e-47 |
Msa0377440 | Msa1376930 | 0.803244 | 3.824164e-49 | -8.615850e-47 |
Msa0379640 | Msa1376930 | 0.822969 | 1.781775e-53 | -8.615850e-47 |
Msa0387280 | Msa1376930 | 0.803015 | 4.265362e-49 | -8.615850e-47 |
Msa0389810 | Msa1376930 | 0.826368 | 2.818392e-54 | -8.615850e-47 |
Msa0392040 | Msa1376930 | -0.837574 | 4.796550e-57 | -8.615850e-47 |
Msa0393620 | Msa1376930 | 0.801152 | 1.030387e-48 | -8.615850e-47 |
Msa0398200 | Msa1376930 | 0.800340 | 1.509302e-48 | -8.615850e-47 |
Msa0412840 | Msa1376930 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
Msa0416760 | Msa1376930 | 0.821984 | 3.018658e-53 | -8.615850e-47 |
Msa0426900 | Msa1376930 | 0.819451 | 1.153695e-52 | -8.615850e-47 |
Msa0429090 | Msa1376930 | 0.814554 | 1.452388e-51 | -8.615850e-47 |
Msa0433410 | Msa1376930 | -0.822925 | 1.824426e-53 | -8.615850e-47 |
Msa0436370 | Msa1376930 | 0.807226 | 5.604950e-50 | -8.615850e-47 |
Msa0444090 | Msa1376930 | 0.822929 | 1.821330e-53 | -8.615850e-47 |
Msa0444750 | Msa1376930 | -0.861378 | 1.070180e-63 | -8.615850e-47 |
Msa0458440 | Msa1376930 | 0.822233 | 2.643771e-53 | -8.615850e-47 |
Msa0466390 | Msa1376930 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
Msa0468130 | Msa1376930 | 0.804143 | 2.488189e-49 | -8.615850e-47 |
Msa0469940 | Msa1376930 | -0.859514 | 3.924543e-63 | -8.615850e-47 |
Msa0471900 | Msa1376930 | 0.823830 | 1.121356e-53 | -8.615850e-47 |
Msa0475500 | Msa1376930 | 0.806838 | 6.771074e-50 | -8.615850e-47 |
Msa0479340 | Msa1376930 | 0.820828 | 5.580273e-53 | -8.615850e-47 |
Msa0482180 | Msa1376930 | 0.802633 | 5.114026e-49 | -8.615850e-47 |
Msa0482190 | Msa1376930 | -0.817146 | 3.836703e-52 | -8.615850e-47 |
Msa0982270 | Msa1376930 | 0.815195 | 1.046927e-51 | -8.615850e-47 |
Msa0999100 | Msa1376930 | 0.816043 | 6.778252e-52 | -8.615850e-47 |
Msa1006160 | Msa1376930 | -0.828553 | 8.434899e-55 | -8.615850e-47 |
Msa1019710 | Msa1376930 | 0.808200 | 3.480522e-50 | -8.615850e-47 |
Msa1021510 | Msa1376930 | 0.800309 | 1.530840e-48 | -8.615850e-47 |
Msa1032800 | Msa1376930 | 0.810262 | 1.257688e-50 | -8.615850e-47 |
Msa1033410 | Msa1376930 | -0.802976 | 4.345369e-49 | -8.615850e-47 |
Msa1033780 | Msa1376930 | 0.832554 | 8.847639e-56 | -8.615850e-47 |
Msa1039710 | Msa1376930 | -0.833296 | 5.786703e-56 | -8.615850e-47 |
Msa1041600 | Msa1376930 | -0.818075 | 2.368111e-52 | -8.615850e-47 |
Msa1063420 | Msa1376930 | 0.800836 | 1.195796e-48 | -8.615850e-47 |
Msa1068200 | Msa1376930 | -0.814287 | 1.663878e-51 | -8.615850e-47 |
Msa1073070 | Msa1376930 | -0.815351 | 9.665689e-52 | -8.615850e-47 |
Msa1073660 | Msa1376930 | 0.808210 | 3.464073e-50 | -8.615850e-47 |
Msa1074530 | Msa1376930 | 0.814629 | 1.397515e-51 | -8.615850e-47 |
Msa1075080 | Msa1376930 | -0.855188 | 7.461348e-62 | -8.615850e-47 |
Msa1075220 | Msa1376930 | -0.828655 | 7.969466e-55 | -8.615850e-47 |
Msa1079430 | Msa1376930 | 0.801236 | 9.902305e-49 | -8.615850e-47 |
Msa1082500 | Msa1376930 | 0.803368 | 3.604892e-49 | -8.615850e-47 |
Msa1084260 | Msa1376930 | 0.818597 | 1.804124e-52 | -8.615850e-47 |
Msa1090260 | Msa1376930 | 0.823259 | 1.525303e-53 | -8.615850e-47 |
Msa1098250 | Msa1376930 | 0.841005 | 6.176577e-58 | -8.615850e-47 |
Msa1098270 | Msa1376930 | 0.844764 | 6.177136e-59 | -8.615850e-47 |
Msa1100480 | Msa1376930 | 0.803755 | 2.995513e-49 | -8.615850e-47 |
Msa0244140 | Msa1376930 | 0.816628 | 5.012538e-52 | -8.615850e-47 |
Msa0244190 | Msa1376930 | 0.808734 | 2.677798e-50 | -8.615850e-47 |
Msa0249100 | Msa1376930 | 0.801568 | 8.468066e-49 | -8.615850e-47 |
Msa0258030 | Msa1376930 | 0.812263 | 4.629777e-51 | -8.615850e-47 |
Msa0266240 | Msa1376930 | 0.801702 | 7.949219e-49 | -8.615850e-47 |
Msa0269810 | Msa1376930 | 0.856775 | 2.560752e-62 | -8.615850e-47 |
Msa0280570 | Msa1376930 | 0.801495 | 8.765618e-49 | -8.615850e-47 |
Msa0292170 | Msa1376930 | 0.812458 | 4.197418e-51 | -8.615850e-47 |
Msa0305190 | Msa1376930 | 0.806986 | 6.302759e-50 | -8.615850e-47 |
Msa0306210 | Msa1376930 | -0.810660 | 1.032372e-50 | -8.615850e-47 |
Msa0311470 | Msa1376930 | 0.801312 | 9.554157e-49 | -8.615850e-47 |
Msa0319170 | Msa1376930 | 0.839173 | 1.856061e-57 | -8.615850e-47 |
Msa0330390 | Msa1376930 | 0.803984 | 2.685599e-49 | -8.615850e-47 |
Msa0338110 | Msa1376930 | 0.804611 | 1.987612e-49 | -8.615850e-47 |
Msa0340450 | Msa1376930 | 0.832280 | 1.034567e-55 | -8.615850e-47 |
Msa0342070 | Msa1376930 | 0.822553 | 2.227909e-53 | -8.615850e-47 |
Msa0344690 | Msa1376930 | -0.856409 | 3.280135e-62 | -8.615850e-47 |
Msa0344980 | Msa1376930 | 0.802643 | 5.090598e-49 | -8.615850e-47 |
Msa0347650 | Msa1376930 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
Msa0350320 | Msa1376930 | -0.839821 | 1.259778e-57 | -8.615850e-47 |
Msa0354800 | Msa1376930 | -0.828779 | 7.434959e-55 | -8.615850e-47 |
Msa1109820 | Msa1376930 | 0.812730 | 3.659666e-51 | -8.615850e-47 |
Msa1115280 | Msa1376930 | 0.800175 | 1.629943e-48 | -8.615850e-47 |
Msa1118760 | Msa1376930 | 0.809661 | 1.694773e-50 | -8.615850e-47 |
Msa1121500 | Msa1376930 | 0.800045 | 1.732706e-48 | -8.615850e-47 |
Msa1139000 | Msa1376930 | -0.810828 | 9.491463e-51 | -8.615850e-47 |
Msa1144720 | Msa1376930 | -0.846659 | 1.890750e-59 | -8.615850e-47 |
Msa1156340 | Msa1376930 | -0.813748 | 2.187877e-51 | -8.615850e-47 |
Msa1162550 | Msa1376930 | -0.848788 | 4.901541e-60 | -8.615850e-47 |
Msa1163590 | Msa1376930 | -0.810622 | 1.051971e-50 | -8.615850e-47 |
Msa1166500 | Msa1376930 | -0.817991 | 2.474436e-52 | -8.615850e-47 |
Msa1174310 | Msa1376930 | 0.815099 | 1.099517e-51 | -8.615850e-47 |
Msa1177780 | Msa1376930 | 0.821541 | 3.821848e-53 | -8.615850e-47 |
Msa1186950 | Msa1376930 | -0.807646 | 4.566811e-50 | -8.615850e-47 |
Msa1195190 | Msa1376930 | 0.803922 | 2.766801e-49 | -8.615850e-47 |
Msa1205390 | Msa1376930 | 0.839383 | 1.637791e-57 | -8.615850e-47 |
Msa1207380 | Msa1376930 | 0.801591 | 8.375259e-49 | -8.615850e-47 |
Msa1215920 | Msa1376930 | 0.803677 | 3.109837e-49 | -8.615850e-47 |
Msa1224480 | Msa1376930 | 0.814105 | 1.824605e-51 | -8.615850e-47 |
Msa0484780 | Msa1376930 | 0.806640 | 7.458346e-50 | -8.615850e-47 |
Msa0485490 | Msa1376930 | 0.815678 | 8.172308e-52 | -8.615850e-47 |
Msa0485500 | Msa1376930 | -0.812408 | 4.304701e-51 | -8.615850e-47 |
Msa0516370 | Msa1376930 | 0.815308 | 9.878948e-52 | -8.615850e-47 |
Msa0525610 | Msa1376930 | 0.806082 | 9.775917e-50 | -8.615850e-47 |
Msa0526070 | Msa1376930 | -0.827762 | 1.308119e-54 | -8.615850e-47 |
Msa0530650 | Msa1376930 | 0.848428 | 6.167601e-60 | -8.615850e-47 |
Msa0532810 | Msa1376930 | -0.810520 | 1.106742e-50 | -8.615850e-47 |
Msa0536220 | Msa1376930 | 0.817241 | 3.652871e-52 | -8.615850e-47 |
Msa0546490 | Msa1376930 | 0.805932 | 1.051335e-49 | -8.615850e-47 |
Msa0553460 | Msa1376930 | 0.820889 | 5.403976e-53 | -8.615850e-47 |
Msa0558690 | Msa1376930 | 0.817844 | 2.670783e-52 | -8.615850e-47 |
Msa0572420 | Msa1376930 | 0.820609 | 6.265447e-53 | -8.615850e-47 |
Msa0572480 | Msa1376930 | 0.809972 | 1.452764e-50 | -8.615850e-47 |
Msa0573580 | Msa1376930 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
Msa0574850 | Msa1376930 | 0.864112 | 1.536668e-64 | -8.615850e-47 |
Msa0580000 | Msa1376930 | 0.802998 | 4.298735e-49 | -8.615850e-47 |
Msa0587190 | Msa1376930 | 0.845173 | 4.790338e-59 | -8.615850e-47 |
Msa0847880 | Msa1376930 | 0.827847 | 1.247548e-54 | -8.615850e-47 |
Msa0865510 | Msa1376930 | -0.809047 | 2.294496e-50 | -8.615850e-47 |
Msa0874630 | Msa1376930 | 0.823191 | 1.581567e-53 | -8.615850e-47 |
Msa0907070 | Msa1376930 | 0.805567 | 1.254197e-49 | -8.615850e-47 |
Msa0908770 | Msa1376930 | -0.807256 | 5.525560e-50 | -8.615850e-47 |
Msa0915610 | Msa1376930 | 0.804805 | 1.810832e-49 | -8.615850e-47 |
Msa0924310 | Msa1376930 | 0.812927 | 3.314458e-51 | -8.615850e-47 |
Msa0945120 | Msa1376930 | 0.802244 | 6.151071e-49 | -8.615850e-47 |
Msa0946690 | Msa1376930 | -0.823846 | 1.111854e-53 | -8.615850e-47 |
Msa0964130 | Msa1376930 | 0.801575 | 8.441293e-49 | -8.615850e-47 |
Msa0969520 | Msa1376930 | 0.810865 | 9.318305e-51 | -8.615850e-47 |
Msa0973600 | Msa1376930 | 0.801656 | 8.124190e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1376930 | MtrunA17_Chr8g0381681 | 96.657 | 329 | 7 | 1 | 1 | 329 | 1 | 325 | 0.0 | 645 |
Msa1376930 | MtrunA17_Chr3g0123621 | 62.349 | 332 | 116 | 6 | 3 | 330 | 2 | 328 | 1.22e-136 | 390 |
Msa1376930 | MtrunA17_Chr3g0132501 | 38.699 | 292 | 168 | 5 | 9 | 292 | 10 | 298 | 4.00e-57 | 188 |
Msa1376930 | MtrunA17_Chr3g0137621 | 30.921 | 152 | 100 | 3 | 1 | 149 | 1 | 150 | 1.79e-15 | 77.4 |
Msa1376930 | MtrunA17_Chr4g0071851 | 25.097 | 259 | 177 | 7 | 27 | 274 | 30 | 282 | 2.95e-15 | 76.6 |
Msa1376930 | MtrunA17_Chr4g0064391 | 28.061 | 196 | 124 | 6 | 2 | 190 | 5 | 190 | 2.20e-13 | 70.9 |
Msa1376930 | MtrunA17_Chr2g0298681 | 27.746 | 173 | 113 | 4 | 27 | 190 | 30 | 199 | 2.65e-13 | 70.5 |
Msa1376930 | MtrunA17_Chr8g0336601 | 30.065 | 153 | 101 | 3 | 1 | 149 | 1 | 151 | 2.67e-13 | 70.5 |
Msa1376930 | MtrunA17_Chr8g0376161 | 33.333 | 129 | 81 | 4 | 31 | 157 | 34 | 159 | 3.38e-13 | 70.1 |
Msa1376930 | MtrunA17_Chr2g0278681 | 29.870 | 154 | 100 | 4 | 1 | 149 | 1 | 151 | 6.74e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1376930 | AT4G40080.1 | 48.864 | 352 | 154 | 9 | 1 | 329 | 1 | 349 | 5.24e-98 | 294 |
Msa1376930 | AT5G10410.1 | 34.432 | 273 | 151 | 10 | 7 | 262 | 6 | 267 | 8.27e-32 | 122 |
Msa1376930 | AT5G65370.1 | 29.181 | 281 | 168 | 9 | 1 | 262 | 1 | 269 | 8.39e-24 | 99.4 |
Msa1376930 | AT5G57200.1 | 24.125 | 257 | 180 | 6 | 27 | 274 | 30 | 280 | 8.20e-14 | 72.8 |
Msa1376930 | AT4G32285.1 | 29.530 | 149 | 100 | 3 | 4 | 149 | 3 | 149 | 1.29e-13 | 72.0 |
Msa1376930 | AT4G32285.2 | 29.530 | 149 | 100 | 3 | 4 | 149 | 3 | 149 | 1.29e-13 | 72.0 |
Msa1376930 | AT2G25430.1 | 29.730 | 148 | 99 | 3 | 5 | 149 | 4 | 149 | 1.45e-13 | 72.0 |
Msa1376930 | AT4G25940.1 | 30.247 | 162 | 106 | 4 | 10 | 167 | 11 | 169 | 2.89e-13 | 70.9 |
Msa1376930 | AT4G02650.1 | 30.345 | 145 | 94 | 3 | 10 | 149 | 10 | 152 | 3.10e-13 | 70.9 |
Msa1376930 | AT2G01600.1 | 33.333 | 129 | 81 | 4 | 31 | 157 | 34 | 159 | 5.55e-13 | 70.1 |
Msa1376930 | AT1G03050.1 | 30.345 | 145 | 94 | 3 | 10 | 149 | 10 | 152 | 3.57e-12 | 67.8 |
Msa1376930 | AT1G14910.1 | 30.233 | 129 | 85 | 4 | 31 | 157 | 34 | 159 | 6.03e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTGAAGTGAATGAGTTTA+AGG | 0.146193 | tig0019839:+141067 | Msa1376930:CDS |
AGAGAGGGTGGTGATGATTT+TGG | 0.182988 | tig0019839:+141163 | Msa1376930:CDS |
TGTCTTTGATTATGTTTATT+AGG | 0.192374 | tig0019839:-140404 | None:intergenic |
CTTTGTACTTCACGAATATT+AGG | 0.195912 | tig0019839:+140825 | Msa1376930:CDS |
AGGTTAGGGTGTTTGGAATT+TGG | 0.217369 | tig0019839:+141092 | Msa1376930:CDS |
CATGCGTGGTGGCGCGTAAA+AGG | 0.245276 | tig0019839:-140476 | None:intergenic |
TAAGGAGAGGTTAGGGTGTT+TGG | 0.259878 | tig0019839:+141085 | Msa1376930:CDS |
ATATTAGGTTTCTTCTTTCT+TGG | 0.260154 | tig0019839:+140840 | Msa1376930:CDS |
GTTGAAGGAGTTTGATTCTT+TGG | 0.272817 | tig0019839:+140917 | Msa1376930:CDS |
TTGTTCATGTTCACTTGATC+TGG | 0.299217 | tig0019839:-140969 | None:intergenic |
GGTGGATGAGATAGTGAATT+TGG | 0.313395 | tig0019839:+141007 | Msa1376930:CDS |
AATGAGTTTAAGGAGAGGTT+AGG | 0.335488 | tig0019839:+141077 | Msa1376930:CDS |
GGTTGGAATGGAGGTGTATA+AGG | 0.337777 | tig0019839:+141232 | Msa1376930:CDS |
TATTAGGTTTCTTCTTTCTT+GGG | 0.348931 | tig0019839:+140841 | Msa1376930:CDS |
TGAATTTGGTTTGTGAAGAT+TGG | 0.373475 | tig0019839:+141021 | Msa1376930:CDS |
TTCGTGGGAACTTTCTTGTT+GGG | 0.385009 | tig0019839:+140770 | Msa1376930:CDS |
GAGAGCAACGGCGGCGTTGT+TGG | 0.403727 | tig0019839:-140613 | None:intergenic |
CTTCGTGGGAACTTTCTTGT+TGG | 0.404521 | tig0019839:+140769 | Msa1376930:CDS |
GGAAAAGGGTAGGGTGCATA+AGG | 0.410677 | tig0019839:+141253 | Msa1376930:CDS |
TTCTTTGGTGACACTGGTTG+AGG | 0.421524 | tig0019839:+140932 | Msa1376930:CDS |
TCAGTTCTCGTGATTCCCTT+TGG | 0.432756 | tig0019839:+141327 | Msa1376930:CDS |
ATTTGGAGAAGCTGTTGAAT+TGG | 0.433804 | tig0019839:+141109 | Msa1376930:CDS |
GAATTTGGTTTGTGAAGATT+GGG | 0.435014 | tig0019839:+141022 | Msa1376930:CDS |
AACTTTCTTGTTGGGTACGC+TGG | 0.446346 | tig0019839:+140778 | Msa1376930:CDS |
TACAAACTGTGGTTTGTTGA+AGG | 0.449445 | tig0019839:+140902 | Msa1376930:CDS |
ACAGCAAGGGTTGTGGGATT+CGG | 0.450595 | tig0019839:+141190 | Msa1376930:CDS |
GGAGTCACAGCAAGGGTTGT+GGG | 0.451429 | tig0019839:+141184 | Msa1376930:CDS |
CCCTTTGGTTTCCCTCTGGA+AGG | 0.452637 | tig0019839:+141342 | Msa1376930:CDS |
TTATCTGTTTACCCTTCAAC+CGG | 0.456568 | tig0019839:+140696 | Msa1376930:CDS |
AATGGAGGTGTATAAGGAAA+AGG | 0.456653 | tig0019839:+141238 | Msa1376930:CDS |
GGTGAGAGAGGTGAAGGATA+AGG | 0.466786 | tig0019839:+141211 | Msa1376930:CDS |
TGCGCGTGAACCGTCGGTGG+AGG | 0.467786 | tig0019839:-140544 | None:intergenic |
AAAGGGTAGGGTGCATAAGG+AGG | 0.471808 | tig0019839:+141256 | Msa1376930:CDS |
CAAGAAAGTTCCCACGAAGT+TGG | 0.471951 | tig0019839:-140765 | None:intergenic |
GATTCCCTTTGGTTTCCCTC+TGG | 0.472352 | tig0019839:+141338 | Msa1376930:CDS |
ATAAGGAGGGAAGAAAGTTA+AGG | 0.477466 | tig0019839:+141270 | Msa1376930:CDS |
ATGAGTTTAAGGAGAGGTTA+GGG | 0.479103 | tig0019839:+141078 | Msa1376930:CDS |
AGAGAGGTGAAGGATAAGGT+TGG | 0.486121 | tig0019839:+141215 | Msa1376930:CDS |
CTCCTTCTTAGAACTCCTCA+TGG | 0.486237 | tig0019839:+140575 | Msa1376930:CDS |
TGGAGTCACAGCAAGGGTTG+TGG | 0.486285 | tig0019839:+141183 | Msa1376930:CDS |
ATGCGTGGTGGCGCGTAAAA+GGG | 0.490324 | tig0019839:-140475 | None:intergenic |
AAGGGTAGGGTGCATAAGGA+GGG | 0.491561 | tig0019839:+141257 | Msa1376930:CDS |
TCTTTGGTGACACTGGTTGA+GGG | 0.496012 | tig0019839:+140933 | Msa1376930:CDS |
GGTTTGTTGTTTGAAGAGGT+TGG | 0.498420 | tig0019839:+141130 | Msa1376930:CDS |
GCGTAAAAGGGAGAGGGTGG+TGG | 0.501291 | tig0019839:-140463 | None:intergenic |
TAGTTTCTACCACCGGTTGA+AGG | 0.501899 | tig0019839:-140708 | None:intergenic |
ATGGAGGTGTATAAGGAAAA+GGG | 0.504494 | tig0019839:+141239 | Msa1376930:CDS |
CTTTGGTGACACTGGTTGAG+GGG | 0.505079 | tig0019839:+140934 | Msa1376930:CDS |
GGTGAAGGATAAGGTTGGAA+TGG | 0.506608 | tig0019839:+141220 | Msa1376930:CDS |
CGTGGAGATATGTTTGTGGG+TGG | 0.510992 | tig0019839:-140514 | None:intergenic |
CTTGGGAAATCTTTGTGTGA+CGG | 0.516792 | tig0019839:+140858 | Msa1376930:CDS |
TTTGTGGGTGGGAGGAGTGA+AGG | 0.525799 | tig0019839:-140502 | None:intergenic |
AATTGGTTTGTTGTTTGAAG+AGG | 0.527047 | tig0019839:+141126 | Msa1376930:CDS |
GAGTTCTAAGAAGGAGGAAG+CGG | 0.537195 | tig0019839:-140568 | None:intergenic |
GTTAAGATAGTTTCTACCAC+CGG | 0.540411 | tig0019839:-140715 | None:intergenic |
GTTTGATTCTTTGGTGACAC+TGG | 0.541118 | tig0019839:+140926 | Msa1376930:CDS |
ACGCTCCTCTCCTCCACCGA+CGG | 0.543777 | tig0019839:+140534 | Msa1376930:CDS |
GAAGGATAAGGTTGGAATGG+AGG | 0.543884 | tig0019839:+141223 | Msa1376930:CDS |
TGGTGGCGCGTAAAAGGGAG+AGG | 0.552428 | tig0019839:-140470 | None:intergenic |
GTCCATGAGGAGTTCTAAGA+AGG | 0.553775 | tig0019839:-140577 | None:intergenic |
GGATTCGGTGAGAGAGGTGA+AGG | 0.555628 | tig0019839:+141205 | Msa1376930:CDS |
GGTTGGAGGAGTGTAAAGAG+AGG | 0.557650 | tig0019839:+141147 | Msa1376930:CDS |
CTTGAAGTATGAAGCTTCCA+TGG | 0.558623 | tig0019839:-140668 | None:intergenic |
GTGGAGATATGTTTGTGGGT+GGG | 0.558835 | tig0019839:-140513 | None:intergenic |
GGAGCGTGGAGATATGTTTG+TGG | 0.559172 | tig0019839:-140518 | None:intergenic |
AGTTTCTACCACCGGTTGAA+GGG | 0.559859 | tig0019839:-140707 | None:intergenic |
GTTGTGGGATTCGGTGAGAG+AGG | 0.560768 | tig0019839:+141199 | Msa1376930:CDS |
GGAGGAGTGTAAAGAGAGGG+TGG | 0.560791 | tig0019839:+141151 | Msa1376930:CDS |
AGCGGTTGCGCGTGAACCGT+CGG | 0.562609 | tig0019839:-140550 | None:intergenic |
TAAGGTTTAGTGAGTCTGAT+CGG | 0.565323 | tig0019839:+141288 | Msa1376930:CDS |
GTTGGAGGAGTGTAAAGAGA+GGG | 0.565591 | tig0019839:+141148 | Msa1376930:CDS |
GAGCGTGGAGATATGTTTGT+GGG | 0.568041 | tig0019839:-140517 | None:intergenic |
ATAATACAAATCCAACTTCG+TGG | 0.571622 | tig0019839:+140754 | Msa1376930:CDS |
TTGTTGTTTGAAGAGGTTGG+AGG | 0.572648 | tig0019839:+141133 | Msa1376930:CDS |
CCTTCCAGAGGGAAACCAAA+GGG | 0.573156 | tig0019839:-141342 | None:intergenic |
GAGATATGTTTGTGGGTGGG+AGG | 0.573647 | tig0019839:-140510 | None:intergenic |
TAATACAAATCCAACTTCGT+GGG | 0.573656 | tig0019839:+140755 | Msa1376930:CDS |
CAAGAACAAGAACAAGTTGG+TGG | 0.583931 | tig0019839:+140989 | Msa1376930:CDS |
GAACAAGAACAAGAACAAGT+TGG | 0.588041 | tig0019839:+140986 | Msa1376930:CDS |
GGCGCGTAAAAGGGAGAGGG+TGG | 0.589270 | tig0019839:-140466 | None:intergenic |
GGTGTATAAGGAAAAGGGTA+GGG | 0.591904 | tig0019839:+141244 | Msa1376930:CDS |
AGGTGTATAAGGAAAAGGGT+AGG | 0.594328 | tig0019839:+141243 | Msa1376930:CDS |
GTTCATCATATCATCAGCCA+TGG | 0.595539 | tig0019839:+140651 | Msa1376930:CDS |
GTCGGTGGAGGAGAGGAGCG+TGG | 0.605829 | tig0019839:-140532 | None:intergenic |
CATGAGGAGTTCTAAGAAGG+AGG | 0.607142 | tig0019839:-140574 | None:intergenic |
GTGAACCGTCGGTGGAGGAG+AGG | 0.607639 | tig0019839:-140539 | None:intergenic |
TTTGGTTTGTGAAGATTGGG+TGG | 0.619906 | tig0019839:+141025 | Msa1376930:CDS |
AAGTGAATGAGTTTAAGGAG+AGG | 0.627174 | tig0019839:+141072 | Msa1376930:CDS |
CTTTACAATAACCTTCCAGA+GGG | 0.627666 | tig0019839:-141353 | None:intergenic |
GTTTCTTGTCTTACAAACTG+TGG | 0.632756 | tig0019839:+140891 | Msa1376930:CDS |
TATTATGTCGAAAATTCGAG+AGG | 0.648120 | tig0019839:-140737 | None:intergenic |
GAGAGACTTGAGAGCAACGG+CGG | 0.649205 | tig0019839:-140622 | None:intergenic |
TCTGTTTACCCTTCAACCGG+TGG | 0.651507 | tig0019839:+140699 | Msa1376930:CDS |
ACCTTCCAGAGGGAAACCAA+AGG | 0.651596 | tig0019839:-141343 | None:intergenic |
GGTGGCGCGTAAAAGGGAGA+GGG | 0.653956 | tig0019839:-140469 | None:intergenic |
AGTGAAGGAGTCATGCGTGG+TGG | 0.667894 | tig0019839:-140487 | None:intergenic |
TTGGGTGGTGATAGAAACTG+TGG | 0.673066 | tig0019839:+141040 | Msa1376930:CDS |
GATGAGAGACTTGAGAGCAA+CGG | 0.674885 | tig0019839:-140625 | None:intergenic |
ACTTTACAATAACCTTCCAG+AGG | 0.687480 | tig0019839:-141354 | None:intergenic |
AGGAGTGAAGGAGTCATGCG+TGG | 0.688189 | tig0019839:-140490 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTCTTTGATTATGTTTATT+AGG | - | tig0019839:140407-140426 | None:intergenic | 20.0% |
!! | TGTCTTTGATTATGTTTATT+AGG | - | tig0019839:140407-140426 | None:intergenic | 20.0% |
! | ATATTAGGTTTCTTCTTTCT+TGG | + | tig0019839:140840-140859 | Msa1376930:CDS | 25.0% |
! | TATTAGGTTTCTTCTTTCTT+GGG | + | tig0019839:140841-140860 | Msa1376930:CDS | 25.0% |
! | ATATTAGGTTTCTTCTTTCT+TGG | + | tig0019839:140840-140859 | Msa1376930:CDS | 25.0% |
! | TATTAGGTTTCTTCTTTCTT+GGG | + | tig0019839:140841-140860 | Msa1376930:CDS | 25.0% |
TATTATGTCGAAAATTCGAG+AGG | - | tig0019839:140740-140759 | None:intergenic | 30.0% | |
ATAATACAAATCCAACTTCG+TGG | + | tig0019839:140754-140773 | Msa1376930:CDS | 30.0% | |
TAATACAAATCCAACTTCGT+GGG | + | tig0019839:140755-140774 | Msa1376930:CDS | 30.0% | |
CTTTGTACTTCACGAATATT+AGG | + | tig0019839:140825-140844 | Msa1376930:CDS | 30.0% | |
!! | TGAATTTGGTTTGTGAAGAT+TGG | + | tig0019839:141021-141040 | Msa1376930:CDS | 30.0% |
!! | GAATTTGGTTTGTGAAGATT+GGG | + | tig0019839:141022-141041 | Msa1376930:CDS | 30.0% |
AGTTGAAGTGAATGAGTTTA+AGG | + | tig0019839:141067-141086 | Msa1376930:CDS | 30.0% | |
!! | AATTGGTTTGTTGTTTGAAG+AGG | + | tig0019839:141126-141145 | Msa1376930:CDS | 30.0% |
TATTATGTCGAAAATTCGAG+AGG | - | tig0019839:140740-140759 | None:intergenic | 30.0% | |
ATAATACAAATCCAACTTCG+TGG | + | tig0019839:140754-140773 | Msa1376930:CDS | 30.0% | |
TAATACAAATCCAACTTCGT+GGG | + | tig0019839:140755-140774 | Msa1376930:CDS | 30.0% | |
CTTTGTACTTCACGAATATT+AGG | + | tig0019839:140825-140844 | Msa1376930:CDS | 30.0% | |
!! | TGAATTTGGTTTGTGAAGAT+TGG | + | tig0019839:141021-141040 | Msa1376930:CDS | 30.0% |
!! | GAATTTGGTTTGTGAAGATT+GGG | + | tig0019839:141022-141041 | Msa1376930:CDS | 30.0% |
AGTTGAAGTGAATGAGTTTA+AGG | + | tig0019839:141067-141086 | Msa1376930:CDS | 30.0% | |
!! | AATTGGTTTGTTGTTTGAAG+AGG | + | tig0019839:141126-141145 | Msa1376930:CDS | 30.0% |
TTATCTGTTTACCCTTCAAC+CGG | + | tig0019839:140696-140715 | Msa1376930:CDS | 35.0% | |
GTTAAGATAGTTTCTACCAC+CGG | - | tig0019839:140718-140737 | None:intergenic | 35.0% | |
GTTTCTTGTCTTACAAACTG+TGG | + | tig0019839:140891-140910 | Msa1376930:CDS | 35.0% | |
!! | TACAAACTGTGGTTTGTTGA+AGG | + | tig0019839:140902-140921 | Msa1376930:CDS | 35.0% |
GTTGAAGGAGTTTGATTCTT+TGG | + | tig0019839:140917-140936 | Msa1376930:CDS | 35.0% | |
TTGTTCATGTTCACTTGATC+TGG | - | tig0019839:140972-140991 | None:intergenic | 35.0% | |
GAACAAGAACAAGAACAAGT+TGG | + | tig0019839:140986-141005 | Msa1376930:CDS | 35.0% | |
AAGTGAATGAGTTTAAGGAG+AGG | + | tig0019839:141072-141091 | Msa1376930:CDS | 35.0% | |
AATGAGTTTAAGGAGAGGTT+AGG | + | tig0019839:141077-141096 | Msa1376930:CDS | 35.0% | |
ATGAGTTTAAGGAGAGGTTA+GGG | + | tig0019839:141078-141097 | Msa1376930:CDS | 35.0% | |
ATTTGGAGAAGCTGTTGAAT+TGG | + | tig0019839:141109-141128 | Msa1376930:CDS | 35.0% | |
! | AATGGAGGTGTATAAGGAAA+AGG | + | tig0019839:141238-141257 | Msa1376930:CDS | 35.0% |
! | ATGGAGGTGTATAAGGAAAA+GGG | + | tig0019839:141239-141258 | Msa1376930:CDS | 35.0% |
ATAAGGAGGGAAGAAAGTTA+AGG | + | tig0019839:141270-141289 | Msa1376930:CDS | 35.0% | |
TAAGGTTTAGTGAGTCTGAT+CGG | + | tig0019839:141288-141307 | Msa1376930:CDS | 35.0% | |
TTATCTGTTTACCCTTCAAC+CGG | + | tig0019839:140696-140715 | Msa1376930:CDS | 35.0% | |
GTTAAGATAGTTTCTACCAC+CGG | - | tig0019839:140718-140737 | None:intergenic | 35.0% | |
GTTTCTTGTCTTACAAACTG+TGG | + | tig0019839:140891-140910 | Msa1376930:CDS | 35.0% | |
!! | TACAAACTGTGGTTTGTTGA+AGG | + | tig0019839:140902-140921 | Msa1376930:CDS | 35.0% |
GTTGAAGGAGTTTGATTCTT+TGG | + | tig0019839:140917-140936 | Msa1376930:CDS | 35.0% | |
TTGTTCATGTTCACTTGATC+TGG | - | tig0019839:140972-140991 | None:intergenic | 35.0% | |
GAACAAGAACAAGAACAAGT+TGG | + | tig0019839:140986-141005 | Msa1376930:CDS | 35.0% | |
AAGTGAATGAGTTTAAGGAG+AGG | + | tig0019839:141072-141091 | Msa1376930:CDS | 35.0% | |
AATGAGTTTAAGGAGAGGTT+AGG | + | tig0019839:141077-141096 | Msa1376930:CDS | 35.0% | |
ATGAGTTTAAGGAGAGGTTA+GGG | + | tig0019839:141078-141097 | Msa1376930:CDS | 35.0% | |
ATTTGGAGAAGCTGTTGAAT+TGG | + | tig0019839:141109-141128 | Msa1376930:CDS | 35.0% | |
! | AATGGAGGTGTATAAGGAAA+AGG | + | tig0019839:141238-141257 | Msa1376930:CDS | 35.0% |
! | ATGGAGGTGTATAAGGAAAA+GGG | + | tig0019839:141239-141258 | Msa1376930:CDS | 35.0% |
ATAAGGAGGGAAGAAAGTTA+AGG | + | tig0019839:141270-141289 | Msa1376930:CDS | 35.0% | |
TAAGGTTTAGTGAGTCTGAT+CGG | + | tig0019839:141288-141307 | Msa1376930:CDS | 35.0% | |
!!! | CGTTGTTGGTGTTTTGAAGA+CGG | - | tig0019839:140602-140621 | None:intergenic | 40.0% |
GTTCATCATATCATCAGCCA+TGG | + | tig0019839:140651-140670 | Msa1376930:CDS | 40.0% | |
CTTGAAGTATGAAGCTTCCA+TGG | - | tig0019839:140671-140690 | None:intergenic | 40.0% | |
TTCGTGGGAACTTTCTTGTT+GGG | + | tig0019839:140770-140789 | Msa1376930:CDS | 40.0% | |
CTTGGGAAATCTTTGTGTGA+CGG | + | tig0019839:140858-140877 | Msa1376930:CDS | 40.0% | |
! | GTTTGATTCTTTGGTGACAC+TGG | + | tig0019839:140926-140945 | Msa1376930:CDS | 40.0% |
! | CAAGAACAAGAACAAGTTGG+TGG | + | tig0019839:140989-141008 | Msa1376930:CDS | 40.0% |
GGTGGATGAGATAGTGAATT+TGG | + | tig0019839:141007-141026 | Msa1376930:CDS | 40.0% | |
!! | TTTGGTTTGTGAAGATTGGG+TGG | + | tig0019839:141025-141044 | Msa1376930:CDS | 40.0% |
! | AGGTTAGGGTGTTTGGAATT+TGG | + | tig0019839:141092-141111 | Msa1376930:CDS | 40.0% |
!! | GGTTTGTTGTTTGAAGAGGT+TGG | + | tig0019839:141130-141149 | Msa1376930:CDS | 40.0% |
!! | TTGTTGTTTGAAGAGGTTGG+AGG | + | tig0019839:141133-141152 | Msa1376930:CDS | 40.0% |
!!! | ATGATTTTGGAGTCACAGCA+AGG | + | tig0019839:141176-141195 | Msa1376930:CDS | 40.0% |
!!! | TGATTTTGGAGTCACAGCAA+GGG | + | tig0019839:141177-141196 | Msa1376930:CDS | 40.0% |
AGGTGTATAAGGAAAAGGGT+AGG | + | tig0019839:141243-141262 | Msa1376930:CDS | 40.0% | |
GGTGTATAAGGAAAAGGGTA+GGG | + | tig0019839:141244-141263 | Msa1376930:CDS | 40.0% | |
!!! | CGTTGTTGGTGTTTTGAAGA+CGG | - | tig0019839:140602-140621 | None:intergenic | 40.0% |
GTTCATCATATCATCAGCCA+TGG | + | tig0019839:140651-140670 | Msa1376930:CDS | 40.0% | |
CTTGAAGTATGAAGCTTCCA+TGG | - | tig0019839:140671-140690 | None:intergenic | 40.0% | |
TTCGTGGGAACTTTCTTGTT+GGG | + | tig0019839:140770-140789 | Msa1376930:CDS | 40.0% | |
CTTGGGAAATCTTTGTGTGA+CGG | + | tig0019839:140858-140877 | Msa1376930:CDS | 40.0% | |
! | GTTTGATTCTTTGGTGACAC+TGG | + | tig0019839:140926-140945 | Msa1376930:CDS | 40.0% |
! | CAAGAACAAGAACAAGTTGG+TGG | + | tig0019839:140989-141008 | Msa1376930:CDS | 40.0% |
GGTGGATGAGATAGTGAATT+TGG | + | tig0019839:141007-141026 | Msa1376930:CDS | 40.0% | |
!! | TTTGGTTTGTGAAGATTGGG+TGG | + | tig0019839:141025-141044 | Msa1376930:CDS | 40.0% |
! | AGGTTAGGGTGTTTGGAATT+TGG | + | tig0019839:141092-141111 | Msa1376930:CDS | 40.0% |
!! | GGTTTGTTGTTTGAAGAGGT+TGG | + | tig0019839:141130-141149 | Msa1376930:CDS | 40.0% |
!! | TTGTTGTTTGAAGAGGTTGG+AGG | + | tig0019839:141133-141152 | Msa1376930:CDS | 40.0% |
!!! | ATGATTTTGGAGTCACAGCA+AGG | + | tig0019839:141176-141195 | Msa1376930:CDS | 40.0% |
!!! | TGATTTTGGAGTCACAGCAA+GGG | + | tig0019839:141177-141196 | Msa1376930:CDS | 40.0% |
AGGTGTATAAGGAAAAGGGT+AGG | + | tig0019839:141243-141262 | Msa1376930:CDS | 40.0% | |
GGTGTATAAGGAAAAGGGTA+GGG | + | tig0019839:141244-141263 | Msa1376930:CDS | 40.0% | |
GTGGAGATATGTTTGTGGGT+GGG | - | tig0019839:140516-140535 | None:intergenic | 45.0% | |
GAGCGTGGAGATATGTTTGT+GGG | - | tig0019839:140520-140539 | None:intergenic | 45.0% | |
!! | GAGTTCTAAGAAGGAGGAAG+CGG | - | tig0019839:140571-140590 | None:intergenic | 45.0% |
!! | CATGAGGAGTTCTAAGAAGG+AGG | - | tig0019839:140577-140596 | None:intergenic | 45.0% |
CTCCTTCTTAGAACTCCTCA+TGG | + | tig0019839:140575-140594 | Msa1376930:CDS | 45.0% | |
!! | GTCCATGAGGAGTTCTAAGA+AGG | - | tig0019839:140580-140599 | None:intergenic | 45.0% |
!!! | TGTTTTGAAGACGGTCCATG+AGG | - | tig0019839:140593-140612 | None:intergenic | 45.0% |
GATGAGAGACTTGAGAGCAA+CGG | - | tig0019839:140628-140647 | None:intergenic | 45.0% | |
! | AGTTTCTACCACCGGTTGAA+GGG | - | tig0019839:140710-140729 | None:intergenic | 45.0% |
! | TAGTTTCTACCACCGGTTGA+AGG | - | tig0019839:140711-140730 | None:intergenic | 45.0% |
CAAGAAAGTTCCCACGAAGT+TGG | - | tig0019839:140768-140787 | None:intergenic | 45.0% | |
CTTCGTGGGAACTTTCTTGT+TGG | + | tig0019839:140769-140788 | Msa1376930:CDS | 45.0% | |
AACTTTCTTGTTGGGTACGC+TGG | + | tig0019839:140778-140797 | Msa1376930:CDS | 45.0% | |
! | TTCTTTGGTGACACTGGTTG+AGG | + | tig0019839:140932-140951 | Msa1376930:CDS | 45.0% |
! | TCTTTGGTGACACTGGTTGA+GGG | + | tig0019839:140933-140952 | Msa1376930:CDS | 45.0% |
TTGGGTGGTGATAGAAACTG+TGG | + | tig0019839:141040-141059 | Msa1376930:CDS | 45.0% | |
! | TAAGGAGAGGTTAGGGTGTT+TGG | + | tig0019839:141085-141104 | Msa1376930:CDS | 45.0% |
! | GTTGGAGGAGTGTAAAGAGA+GGG | + | tig0019839:141148-141167 | Msa1376930:CDS | 45.0% |
!! | AGAGAGGGTGGTGATGATTT+TGG | + | tig0019839:141163-141182 | Msa1376930:CDS | 45.0% |
AGAGAGGTGAAGGATAAGGT+TGG | + | tig0019839:141215-141234 | Msa1376930:CDS | 45.0% | |
GGTGAAGGATAAGGTTGGAA+TGG | + | tig0019839:141220-141239 | Msa1376930:CDS | 45.0% | |
GAAGGATAAGGTTGGAATGG+AGG | + | tig0019839:141223-141242 | Msa1376930:CDS | 45.0% | |
! | GGTTGGAATGGAGGTGTATA+AGG | + | tig0019839:141232-141251 | Msa1376930:CDS | 45.0% |
TCAGTTCTCGTGATTCCCTT+TGG | + | tig0019839:141327-141346 | Msa1376930:CDS | 45.0% | |
GTGGAGATATGTTTGTGGGT+GGG | - | tig0019839:140516-140535 | None:intergenic | 45.0% | |
GAGCGTGGAGATATGTTTGT+GGG | - | tig0019839:140520-140539 | None:intergenic | 45.0% | |
!! | GAGTTCTAAGAAGGAGGAAG+CGG | - | tig0019839:140571-140590 | None:intergenic | 45.0% |
!! | CATGAGGAGTTCTAAGAAGG+AGG | - | tig0019839:140577-140596 | None:intergenic | 45.0% |
CTCCTTCTTAGAACTCCTCA+TGG | + | tig0019839:140575-140594 | Msa1376930:CDS | 45.0% | |
!! | GTCCATGAGGAGTTCTAAGA+AGG | - | tig0019839:140580-140599 | None:intergenic | 45.0% |
!!! | TGTTTTGAAGACGGTCCATG+AGG | - | tig0019839:140593-140612 | None:intergenic | 45.0% |
GATGAGAGACTTGAGAGCAA+CGG | - | tig0019839:140628-140647 | None:intergenic | 45.0% | |
! | AGTTTCTACCACCGGTTGAA+GGG | - | tig0019839:140710-140729 | None:intergenic | 45.0% |
! | TAGTTTCTACCACCGGTTGA+AGG | - | tig0019839:140711-140730 | None:intergenic | 45.0% |
CAAGAAAGTTCCCACGAAGT+TGG | - | tig0019839:140768-140787 | None:intergenic | 45.0% | |
CTTCGTGGGAACTTTCTTGT+TGG | + | tig0019839:140769-140788 | Msa1376930:CDS | 45.0% | |
AACTTTCTTGTTGGGTACGC+TGG | + | tig0019839:140778-140797 | Msa1376930:CDS | 45.0% | |
! | TTCTTTGGTGACACTGGTTG+AGG | + | tig0019839:140932-140951 | Msa1376930:CDS | 45.0% |
! | TCTTTGGTGACACTGGTTGA+GGG | + | tig0019839:140933-140952 | Msa1376930:CDS | 45.0% |
TTGGGTGGTGATAGAAACTG+TGG | + | tig0019839:141040-141059 | Msa1376930:CDS | 45.0% | |
! | TAAGGAGAGGTTAGGGTGTT+TGG | + | tig0019839:141085-141104 | Msa1376930:CDS | 45.0% |
! | GTTGGAGGAGTGTAAAGAGA+GGG | + | tig0019839:141148-141167 | Msa1376930:CDS | 45.0% |
!! | AGAGAGGGTGGTGATGATTT+TGG | + | tig0019839:141163-141182 | Msa1376930:CDS | 45.0% |
AGAGAGGTGAAGGATAAGGT+TGG | + | tig0019839:141215-141234 | Msa1376930:CDS | 45.0% | |
GGTGAAGGATAAGGTTGGAA+TGG | + | tig0019839:141220-141239 | Msa1376930:CDS | 45.0% | |
GAAGGATAAGGTTGGAATGG+AGG | + | tig0019839:141223-141242 | Msa1376930:CDS | 45.0% | |
! | GGTTGGAATGGAGGTGTATA+AGG | + | tig0019839:141232-141251 | Msa1376930:CDS | 45.0% |
TCAGTTCTCGTGATTCCCTT+TGG | + | tig0019839:141327-141346 | Msa1376930:CDS | 45.0% | |
GAGATATGTTTGTGGGTGGG+AGG | - | tig0019839:140513-140532 | None:intergenic | 50.0% | |
CGTGGAGATATGTTTGTGGG+TGG | - | tig0019839:140517-140536 | None:intergenic | 50.0% | |
GGAGCGTGGAGATATGTTTG+TGG | - | tig0019839:140521-140540 | None:intergenic | 50.0% | |
TCTGTTTACCCTTCAACCGG+TGG | + | tig0019839:140699-140718 | Msa1376930:CDS | 50.0% | |
! | CTTTGGTGACACTGGTTGAG+GGG | + | tig0019839:140934-140953 | Msa1376930:CDS | 50.0% |
! | GGTTGGAGGAGTGTAAAGAG+AGG | + | tig0019839:141147-141166 | Msa1376930:CDS | 50.0% |
ACAGCAAGGGTTGTGGGATT+CGG | + | tig0019839:141190-141209 | Msa1376930:CDS | 50.0% | |
GGTGAGAGAGGTGAAGGATA+AGG | + | tig0019839:141211-141230 | Msa1376930:CDS | 50.0% | |
GGAAAAGGGTAGGGTGCATA+AGG | + | tig0019839:141253-141272 | Msa1376930:CDS | 50.0% | |
AAAGGGTAGGGTGCATAAGG+AGG | + | tig0019839:141256-141275 | Msa1376930:CDS | 50.0% | |
AAGGGTAGGGTGCATAAGGA+GGG | + | tig0019839:141257-141276 | Msa1376930:CDS | 50.0% | |
! | GATTCCCTTTGGTTTCCCTC+TGG | + | tig0019839:141338-141357 | Msa1376930:CDS | 50.0% |
CCTTCCAGAGGGAAACCAAA+GGG | - | tig0019839:141345-141364 | None:intergenic | 50.0% | |
ACCTTCCAGAGGGAAACCAA+AGG | - | tig0019839:141346-141365 | None:intergenic | 50.0% | |
GAGATATGTTTGTGGGTGGG+AGG | - | tig0019839:140513-140532 | None:intergenic | 50.0% | |
CGTGGAGATATGTTTGTGGG+TGG | - | tig0019839:140517-140536 | None:intergenic | 50.0% | |
GGAGCGTGGAGATATGTTTG+TGG | - | tig0019839:140521-140540 | None:intergenic | 50.0% | |
TCTGTTTACCCTTCAACCGG+TGG | + | tig0019839:140699-140718 | Msa1376930:CDS | 50.0% | |
! | CTTTGGTGACACTGGTTGAG+GGG | + | tig0019839:140934-140953 | Msa1376930:CDS | 50.0% |
! | GGTTGGAGGAGTGTAAAGAG+AGG | + | tig0019839:141147-141166 | Msa1376930:CDS | 50.0% |
ACAGCAAGGGTTGTGGGATT+CGG | + | tig0019839:141190-141209 | Msa1376930:CDS | 50.0% | |
GGTGAGAGAGGTGAAGGATA+AGG | + | tig0019839:141211-141230 | Msa1376930:CDS | 50.0% | |
GGAAAAGGGTAGGGTGCATA+AGG | + | tig0019839:141253-141272 | Msa1376930:CDS | 50.0% | |
AAAGGGTAGGGTGCATAAGG+AGG | + | tig0019839:141256-141275 | Msa1376930:CDS | 50.0% | |
AAGGGTAGGGTGCATAAGGA+GGG | + | tig0019839:141257-141276 | Msa1376930:CDS | 50.0% | |
! | GATTCCCTTTGGTTTCCCTC+TGG | + | tig0019839:141338-141357 | Msa1376930:CDS | 50.0% |
CCTTCCAGAGGGAAACCAAA+GGG | - | tig0019839:141345-141364 | None:intergenic | 50.0% | |
ACCTTCCAGAGGGAAACCAA+AGG | - | tig0019839:141346-141365 | None:intergenic | 50.0% | |
! | ATGCGTGGTGGCGCGTAAAA+GGG | - | tig0019839:140478-140497 | None:intergenic | 55.0% |
AGTGAAGGAGTCATGCGTGG+TGG | - | tig0019839:140490-140509 | None:intergenic | 55.0% | |
AGGAGTGAAGGAGTCATGCG+TGG | - | tig0019839:140493-140512 | None:intergenic | 55.0% | |
TTTGTGGGTGGGAGGAGTGA+AGG | - | tig0019839:140505-140524 | None:intergenic | 55.0% | |
GAGAGACTTGAGAGCAACGG+CGG | - | tig0019839:140625-140644 | None:intergenic | 55.0% | |
! | GGAGGAGTGTAAAGAGAGGG+TGG | + | tig0019839:141151-141170 | Msa1376930:CDS | 55.0% |
TGGAGTCACAGCAAGGGTTG+TGG | + | tig0019839:141183-141202 | Msa1376930:CDS | 55.0% | |
GGAGTCACAGCAAGGGTTGT+GGG | + | tig0019839:141184-141203 | Msa1376930:CDS | 55.0% | |
!! | GTTGTGGGATTCGGTGAGAG+AGG | + | tig0019839:141199-141218 | Msa1376930:CDS | 55.0% |
!! | GGATTCGGTGAGAGAGGTGA+AGG | + | tig0019839:141205-141224 | Msa1376930:CDS | 55.0% |
! | CCCTTTGGTTTCCCTCTGGA+AGG | + | tig0019839:141342-141361 | Msa1376930:CDS | 55.0% |
! | ATGCGTGGTGGCGCGTAAAA+GGG | - | tig0019839:140478-140497 | None:intergenic | 55.0% |
AGTGAAGGAGTCATGCGTGG+TGG | - | tig0019839:140490-140509 | None:intergenic | 55.0% | |
AGGAGTGAAGGAGTCATGCG+TGG | - | tig0019839:140493-140512 | None:intergenic | 55.0% | |
TTTGTGGGTGGGAGGAGTGA+AGG | - | tig0019839:140505-140524 | None:intergenic | 55.0% | |
GAGAGACTTGAGAGCAACGG+CGG | - | tig0019839:140625-140644 | None:intergenic | 55.0% | |
! | GGAGGAGTGTAAAGAGAGGG+TGG | + | tig0019839:141151-141170 | Msa1376930:CDS | 55.0% |
TGGAGTCACAGCAAGGGTTG+TGG | + | tig0019839:141183-141202 | Msa1376930:CDS | 55.0% | |
GGAGTCACAGCAAGGGTTGT+GGG | + | tig0019839:141184-141203 | Msa1376930:CDS | 55.0% | |
!! | GTTGTGGGATTCGGTGAGAG+AGG | + | tig0019839:141199-141218 | Msa1376930:CDS | 55.0% |
!! | GGATTCGGTGAGAGAGGTGA+AGG | + | tig0019839:141205-141224 | Msa1376930:CDS | 55.0% |
! | CCCTTTGGTTTCCCTCTGGA+AGG | + | tig0019839:141342-141361 | Msa1376930:CDS | 55.0% |
GCGTAAAAGGGAGAGGGTGG+TGG | - | tig0019839:140466-140485 | None:intergenic | 60.0% | |
GGTGGCGCGTAAAAGGGAGA+GGG | - | tig0019839:140472-140491 | None:intergenic | 60.0% | |
! | TGGTGGCGCGTAAAAGGGAG+AGG | - | tig0019839:140473-140492 | None:intergenic | 60.0% |
! | CATGCGTGGTGGCGCGTAAA+AGG | - | tig0019839:140479-140498 | None:intergenic | 60.0% |
GCGTAAAAGGGAGAGGGTGG+TGG | - | tig0019839:140466-140485 | None:intergenic | 60.0% | |
GGTGGCGCGTAAAAGGGAGA+GGG | - | tig0019839:140472-140491 | None:intergenic | 60.0% | |
! | TGGTGGCGCGTAAAAGGGAG+AGG | - | tig0019839:140473-140492 | None:intergenic | 60.0% |
! | CATGCGTGGTGGCGCGTAAA+AGG | - | tig0019839:140479-140498 | None:intergenic | 60.0% |
GGCGCGTAAAAGGGAGAGGG+TGG | - | tig0019839:140469-140488 | None:intergenic | 65.0% | |
ACGCTCCTCTCCTCCACCGA+CGG | + | tig0019839:140534-140553 | Msa1376930:CDS | 65.0% | |
GTGAACCGTCGGTGGAGGAG+AGG | - | tig0019839:140542-140561 | None:intergenic | 65.0% | |
AGCGGTTGCGCGTGAACCGT+CGG | - | tig0019839:140553-140572 | None:intergenic | 65.0% | |
GAGAGCAACGGCGGCGTTGT+TGG | - | tig0019839:140616-140635 | None:intergenic | 65.0% | |
GGCGCGTAAAAGGGAGAGGG+TGG | - | tig0019839:140469-140488 | None:intergenic | 65.0% | |
ACGCTCCTCTCCTCCACCGA+CGG | + | tig0019839:140534-140553 | Msa1376930:CDS | 65.0% | |
GTGAACCGTCGGTGGAGGAG+AGG | - | tig0019839:140542-140561 | None:intergenic | 65.0% | |
AGCGGTTGCGCGTGAACCGT+CGG | - | tig0019839:140553-140572 | None:intergenic | 65.0% | |
GAGAGCAACGGCGGCGTTGT+TGG | - | tig0019839:140616-140635 | None:intergenic | 65.0% | |
GTCGGTGGAGGAGAGGAGCG+TGG | - | tig0019839:140535-140554 | None:intergenic | 70.0% | |
TGCGCGTGAACCGTCGGTGG+AGG | - | tig0019839:140547-140566 | None:intergenic | 70.0% | |
GGTTGCGCGTGAACCGTCGG+TGG | - | tig0019839:140550-140569 | None:intergenic | 70.0% | |
GTCGGTGGAGGAGAGGAGCG+TGG | - | tig0019839:140535-140554 | None:intergenic | 70.0% | |
TGCGCGTGAACCGTCGGTGG+AGG | - | tig0019839:140547-140566 | None:intergenic | 70.0% | |
GGTTGCGCGTGAACCGTCGG+TGG | - | tig0019839:140550-140569 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019839 | gene | 140381 | 141373 | 140381 | ID=Msa1376930;Name=Msa1376930 |
tig0019839 | mRNA | 140381 | 141373 | 140381 | ID=Msa1376930-mRNA-1;Parent=Msa1376930;Name=Msa1376930-mRNA-1;_AED=0.00;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|330 |
tig0019839 | exon | 140381 | 141373 | 140381 | ID=Msa1376930-mRNA-1:exon:5378;Parent=Msa1376930-mRNA-1 |
tig0019839 | CDS | 140381 | 141373 | 140381 | ID=Msa1376930-mRNA-1:cds;Parent=Msa1376930-mRNA-1 |
Gene Sequence |
Protein sequence |