AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1124280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1124280 MtrunA17_Chr7g0264601 93.878 98 6 0 1 98 1 98 2.07e-57 182
Msa1124280 MtrunA17_Chr4g0028461 50.980 102 40 2 14 115 67 158 4.03e-22 90.1
Msa1124280 MtrunA17_Chr1g0180631 68.750 80 22 2 15 94 26 102 1.53e-21 88.6
Msa1124280 MtrunA17_Chr1g0180631 43.077 65 37 0 14 78 136 200 4.36e-11 59.7
Msa1124280 MtrunA17_Chr6g0454851 60.000 65 26 0 13 77 18 82 2.55e-17 78.2
Msa1124280 MtrunA17_Chr6g0455131 57.812 64 26 1 15 78 19 81 1.95e-14 69.7
Msa1124280 MtrunA17_Chr2g0327311 43.564 101 48 4 14 108 66 163 1.32e-13 67.0
Msa1124280 MtrunA17_Chr6g0454951 53.846 65 30 0 13 77 11 75 8.41e-12 62.0
Msa1124280 MtrunA17_Chr4g0036931 31.092 119 82 0 14 132 29 147 2.22e-11 58.5
Msa1124280 MtrunA17_Chr2g0290471 48.529 68 33 2 13 79 34 100 3.12e-11 59.7
Msa1124280 MtrunA17_Chr8g0386231 43.662 71 38 2 15 83 53 123 8.24e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1124280 AT5G03380.1 52.778 108 49 2 9 114 20 127 1.39e-24 98.2
Msa1124280 AT5G03380.2 54.000 100 44 2 17 114 1 100 8.17e-23 92.8
Msa1124280 AT2G36950.1 56.180 89 37 2 16 104 53 139 2.48e-21 89.0
Msa1124280 AT5G60800.1 60.000 70 27 1 14 83 27 95 8.89e-16 72.8
Msa1124280 AT5G60800.2 60.000 70 27 1 14 83 27 95 1.13e-15 72.8
Msa1124280 AT2G28090.1 47.917 96 37 3 15 109 31 114 9.26e-14 67.0
Msa1124280 AT5G50740.2 48.611 72 35 2 15 84 29 100 3.81e-13 63.9
Msa1124280 AT5G50740.4 48.611 72 35 2 15 84 36 107 7.10e-13 63.2
Msa1124280 AT5G50740.5 48.611 72 35 2 15 84 29 100 1.04e-12 64.3
Msa1124280 AT5G50740.1 48.611 72 35 2 15 84 29 100 1.04e-12 64.3
Msa1124280 AT5G50740.3 48.611 72 35 2 15 84 36 107 1.42e-12 63.9
Msa1124280 AT3G02960.1 36.471 85 50 2 15 98 38 119 8.22e-12 61.6
Msa1124280 AT4G38580.1 35.106 94 61 0 8 101 21 114 1.47e-11 59.3
Msa1124280 AT4G38580.2 35.106 94 61 0 8 101 21 114 1.47e-11 59.3
Msa1124280 AT4G35060.1 26.400 125 92 0 8 132 20 144 7.35e-11 57.4

Find 114 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAAAAGTTGTTTGATTT+TGG 0.150912 7_3:-75442510 None:intergenic
TTCTTACCATCCTCTTTCTT+TGG 0.219108 7_3:-75443900 None:intergenic
AATAACAAACTAACGGTTAT+TGG 0.223438 7_3:+75442947 Msa1124280:CDS
ATAACCGTTAGTTTGTTATT+TGG 0.230170 7_3:-75442944 None:intergenic
AAGGATTTGGTGACGGTAAA+AGG 0.291312 7_3:+75443807 Msa1124280:three_prime_UTR
GCTAGATGAGAATCCAGTTT+TGG 0.305894 7_3:+75444590 Msa1124280:three_prime_UTR
AATGAAATTTCTAACCTGTT+TGG 0.320845 7_3:-75443164 None:intergenic
ATTTGTGGAGGAGGTTGATT+TGG 0.324973 7_3:-75444329 None:intergenic
TAAGGTAGAAGTTAATAAAA+TGG 0.334935 7_3:+75444013 Msa1124280:three_prime_UTR
GTATTAGTTTAATTTAGTTT+TGG 0.337285 7_3:+75444483 Msa1124280:three_prime_UTR
TCCTGAGGTTTATCTGCGGC+GGG 0.344718 7_3:-75443067 None:intergenic
TAGAAATTGTACCGTCGAAA+TGG 0.400716 7_3:-75442814 None:intergenic
CATATACATACACCAACAAA+TGG 0.404953 7_3:+75442532 Msa1124280:exon
AATTATAATCATACCCTTGT+TGG 0.413275 7_3:-75444229 None:intergenic
TTCAGCTTCTCCGTTAGATA+TGG 0.416992 7_3:-75443855 None:intergenic
TCACAAGGTTCGTGATAAAC+TGG 0.419797 7_3:+75442982 Msa1124280:CDS
CTGGTACGACGGATATGAAC+CGG 0.424635 7_3:+75444076 Msa1124280:three_prime_UTR
TTCTTCGGGTTTCTTCTCCT+CGG 0.448426 7_3:-75443134 None:intergenic
GAAATTTCTAACCTGTTTGG+AGG 0.452842 7_3:-75443161 None:intergenic
AACTAACCTGACCCATTTGT+TGG 0.453337 7_3:-75442544 None:intergenic
AATCATACCCTTGTTGGTGT+TGG 0.457276 7_3:-75444223 None:intergenic
AACGGAAACAACGTATATAT+AGG 0.460689 7_3:-75442447 None:intergenic
TCAAGGCCAAGGTGGGCATA+TGG 0.461955 7_3:+75444262 Msa1124280:three_prime_UTR
TATAATTATGTGAATCAAGA+AGG 0.465519 7_3:+75444179 Msa1124280:three_prime_UTR
AAGAATAAAGAGAAAGATGA+GGG 0.468853 7_3:+75443918 Msa1124280:three_prime_UTR
TCATTTCTTGTGTTTGTGGA+TGG 0.469352 7_3:-75442342 None:intergenic
GTTAATAAAATGGAGCATCA+TGG 0.476270 7_3:+75444023 Msa1124280:three_prime_UTR
AGCAAAGGAAGGCGGAACTA+AGG 0.479726 7_3:+75443995 Msa1124280:three_prime_UTR
CTACGCGATGCAAGTTCAGC+CGG 0.480734 7_3:+75444130 Msa1124280:three_prime_UTR
TCACTAAACATTTGTGGAGG+AGG 0.485000 7_3:-75444338 None:intergenic
CTTTCTTCGATACCGTTAGC+AGG 0.485645 7_3:+75443188 Msa1124280:CDS
AAGTGATGAAGGGAAGGATT+TGG 0.486380 7_3:+75443794 Msa1124280:three_prime_UTR
AAAATGGAGCATCATGGGTA+CGG 0.496994 7_3:+75444029 Msa1124280:three_prime_UTR
CACATCATGGAACAAGCATT+CGG 0.498057 7_3:-75444368 None:intergenic
CTGAGGTTTATCTGCGGCGG+GGG 0.500066 7_3:-75443065 None:intergenic
CTCCTGAGGTTTATCTGCGG+CGG 0.500478 7_3:-75443068 None:intergenic
TCCAGTTTCAAAACGACAGA+AGG 0.505925 7_3:-75442746 None:intergenic
AAGTGGTGGTGAGAAGAAAG+AGG 0.507353 7_3:+75443965 Msa1124280:three_prime_UTR
GAATCAGTGACAAGTGATGA+AGG 0.507632 7_3:+75443783 Msa1124280:three_prime_UTR
GGTTGCTGATATTGATATTG+AGG 0.508034 7_3:-75444290 None:intergenic
TTAATAAAATGGAGCATCAT+GGG 0.509928 7_3:+75444024 Msa1124280:three_prime_UTR
ATGGTAAAATGCTCACATCA+TGG 0.510934 7_3:-75444381 None:intergenic
TATAATTATGTGAATCATCA+AGG 0.516463 7_3:+75444245 Msa1124280:three_prime_UTR
TCCGGTTTCTTCTTCTCCTG+AGG 0.516747 7_3:-75443082 None:intergenic
CACATCAAACTCCTATGTAC+TGG 0.518155 7_3:+75444057 Msa1124280:three_prime_UTR
AGTGGTGGTGAGAAGAAAGA+GGG 0.519522 7_3:+75443966 Msa1124280:three_prime_UTR
CGCGCGGTTCGCCATTTCGA+CGG 0.520039 7_3:+75442803 Msa1124280:CDS
CGTCACTAACCATGCGCCAA+TGG 0.522421 7_3:-75444559 None:intergenic
ACCTCAGGAGAAGAAGAAAC+CGG 0.524920 7_3:+75443081 Msa1124280:CDS
CCCCGCCGCAGATAAACCTC+AGG 0.528513 7_3:+75443066 Msa1124280:CDS
GGCGGAGAAAATTAAGAAGA+AGG 0.528996 7_3:+75443003 Msa1124280:CDS
TACGCGATGCAAGTTCAGCC+GGG 0.533998 7_3:+75444131 Msa1124280:three_prime_UTR
ATATAGTTGAACTGTGCCAT+TGG 0.535420 7_3:+75444543 Msa1124280:three_prime_UTR
AAATGGAGCATCATGGGTAC+GGG 0.540394 7_3:+75444030 Msa1124280:three_prime_UTR
TTTGATTTCGTCCCTGCTAA+CGG 0.542235 7_3:-75443200 None:intergenic
TTTGGATGCAAGTAAAATTG+AGG 0.542852 7_3:-75444311 None:intergenic
TTTACAGTCGGTTCAAAACA+CGG 0.543169 7_3:+75443343 Msa1124280:three_prime_UTR
AAACTGGATTCTCATCTAGC+AGG 0.547301 7_3:-75444587 None:intergenic
GTAAATTAAGTATGAAGCAA+CGG 0.557538 7_3:-75442465 None:intergenic
AAGATTAAATTACATTGTGA+TGG 0.558652 7_3:+75443374 Msa1124280:three_prime_UTR
ATAATTATGTGAATCAAGAA+GGG 0.563769 7_3:+75444180 Msa1124280:three_prime_UTR
AAAAGGAACAATAGATGCAA+AGG 0.563969 7_3:+75443824 Msa1124280:three_prime_UTR
AAGATTATCCTCAAAATCAA+AGG 0.564498 7_3:+75443416 Msa1124280:three_prime_UTR
CATACACCAACAAATGGGTC+AGG 0.565091 7_3:+75442538 Msa1124280:exon
ATATACATACACCAACAAAT+GGG 0.570058 7_3:+75442533 Msa1124280:exon
TGTGGTTCAACCAAAGAAAG+AGG 0.576487 7_3:+75443890 Msa1124280:three_prime_UTR
ACTCCTATGTACTGGTACGA+CGG 0.580031 7_3:+75444065 Msa1124280:three_prime_UTR
GGAAATTGTACCATATCTAA+CGG 0.582528 7_3:+75443845 Msa1124280:three_prime_UTR
AGTTTATCACGAACCTTGTG+AGG 0.583513 7_3:-75442980 None:intergenic
AGTGACAAGTGATGAAGGGA+AGG 0.584358 7_3:+75443788 Msa1124280:three_prime_UTR
GGCGCATGGTTAGTGACGTA+CGG 0.588300 7_3:+75444564 Msa1124280:three_prime_UTR
GGAGAAGCTGAAGCGGAATG+TGG 0.588949 7_3:+75443866 Msa1124280:three_prime_UTR
TAAGAATAAAGAGAAAGATG+AGG 0.590847 7_3:+75443917 Msa1124280:three_prime_UTR
ATCTAACGGAGAAGCTGAAG+CGG 0.591313 7_3:+75443859 Msa1124280:three_prime_UTR
GTTCCACCATATGCCCACCT+TGG 0.591927 7_3:-75444268 None:intergenic
TATCCGTCGTACCAGTACAT+AGG 0.593400 7_3:-75444068 None:intergenic
CCACCACTACTACTTTGACC+CGG 0.594795 7_3:-75444095 None:intergenic
GTTCAACCAAAGAAAGAGGA+TGG 0.595685 7_3:+75443894 Msa1124280:three_prime_UTR
TATGTGAATCATCAAGGCCA+AGG 0.596173 7_3:+75444251 Msa1124280:three_prime_UTR
CAAACTAACGGTTATTGGAA+AGG 0.597968 7_3:+75442952 Msa1124280:CDS
AAACTGGACTTACATTGCGA+AGG 0.601860 7_3:+75442761 Msa1124280:CDS
CCTGAGGTTTATCTGCGGCG+GGG 0.602053 7_3:-75443066 None:intergenic
GGTCAAAGTAGTAGTGGTGG+TGG 0.602328 7_3:+75444098 Msa1124280:three_prime_UTR
AGGCCAAGGTGGGCATATGG+TGG 0.607750 7_3:+75444265 Msa1124280:three_prime_UTR
TTTCTTCGATACCGTTAGCA+GGG 0.610978 7_3:+75443189 Msa1124280:CDS
TGAATCATCAAGGCCAAGGT+GGG 0.616379 7_3:+75444255 Msa1124280:three_prime_UTR
TGGTACGACGGATATGAACC+GGG 0.618568 7_3:+75444077 Msa1124280:three_prime_UTR
TGAACTGTGCCATTGGCGCA+TGG 0.621869 7_3:+75444550 Msa1124280:three_prime_UTR
TGAAGGGAAGGATTTGGTGA+CGG 0.623254 7_3:+75443800 Msa1124280:three_prime_UTR
GCTGAAGCGGAATGTGGATG+TGG 0.624843 7_3:+75443872 Msa1124280:three_prime_UTR
TCATCACTAAACATTTGTGG+AGG 0.625101 7_3:-75444341 None:intergenic
CCAGTTTCAAAACGACAGAA+GGG 0.625562 7_3:-75442745 None:intergenic
GAACCGGGTCAAAGTAGTAG+TGG 0.626064 7_3:+75444092 Msa1124280:three_prime_UTR
CCGGGTCAAAGTAGTAGTGG+TGG 0.628078 7_3:+75444095 Msa1124280:three_prime_UTR
ATGTGAACCAACACCAACAA+GGG 0.630482 7_3:+75444216 Msa1124280:three_prime_UTR
ATGAGTCACAATCAGTGAGG+TGG 0.633960 7_3:-75442398 None:intergenic
TATGTGAACCAACACCAACA+AGG 0.636197 7_3:+75444215 Msa1124280:three_prime_UTR
TACGCCAAATAACAAACTAA+CGG 0.636587 7_3:+75442940 Msa1124280:CDS
AATCAGTGACAAGTGATGAA+GGG 0.649426 7_3:+75443784 Msa1124280:three_prime_UTR
TCAAAAGAAGATCAAAGTGG+TGG 0.650941 7_3:+75443951 Msa1124280:three_prime_UTR
CTTCTCCTGAGGTTTATCTG+CGG 0.654019 7_3:-75443071 None:intergenic
GTGAATCATCAAGGCCAAGG+TGG 0.663621 7_3:+75444254 Msa1124280:three_prime_UTR
AGAATAAAGAGAAAGATGAG+GGG 0.672988 7_3:+75443919 Msa1124280:three_prime_UTR
ACTTGATGATTCGAATACCC+CGG 0.673697 7_3:-75444149 None:intergenic
ACGCGATGCAAGTTCAGCCG+GGG 0.674013 7_3:+75444132 Msa1124280:three_prime_UTR
CGGTTAGTGAGAACAAAGCG+TGG 0.681728 7_3:-75443303 None:intergenic
TGGAAAGGTAGATCCTCACA+AGG 0.688035 7_3:+75442967 Msa1124280:CDS
CAAGGTTCGTGATAAACTGG+CGG 0.691001 7_3:+75442985 Msa1124280:CDS
AAATCAAAAGAAGATCAAAG+TGG 0.692885 7_3:+75443948 Msa1124280:three_prime_UTR
TATCTTTAACTTAATCAACA+CGG 0.695784 7_3:-75443271 None:intergenic
AGAGTCAAAGAGAGTGACTG+TGG 0.703780 7_3:-75442421 None:intergenic
TGTCAAGAAGATCAAACGCG+CGG 0.732476 7_3:+75442787 Msa1124280:CDS
TTAGTGAGAACAAAGCGTGG+AGG 0.771025 7_3:-75443300 None:intergenic
TGGATGAGTCACAATCAGTG+AGG 0.810738 7_3:-75442401 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTCAATTTTCTTAT+TGG - chr7_3:75442375-75442394 None:intergenic 10.0%
!! AAAACAAAAATCAATTAAAA+CGG - chr7_3:75443326-75443345 None:intergenic 10.0%
!! ATTATACATGAATAAATAAT+TGG + chr7_3:75443580-75443599 Msa1124280:intron 10.0%
!!! TGAATTTTATAATATTACAT+CGG - chr7_3:75444676-75444695 None:intergenic 10.0%
!!! AAATAATTCAATTTTCTTAT+TGG - chr7_3:75442375-75442394 None:intergenic 10.0%
!! AAAACAAAAATCAATTAAAA+CGG - chr7_3:75443326-75443345 None:intergenic 10.0%
!! ATTATACATGAATAAATAAT+TGG + chr7_3:75443580-75443599 Msa1124280:intron 10.0%
!!! TGAATTTTATAATATTACAT+CGG - chr7_3:75444676-75444695 None:intergenic 10.0%
!!! TATAATTTTATATACACAAG+TGG - chr7_3:75443566-75443585 None:intergenic 15.0%
!!! AAGTTAATATTTTTCTCATT+CGG + chr7_3:75443655-75443674 Msa1124280:intron 15.0%
!!! GTATTAGTTTAATTTAGTTT+TGG + chr7_3:75444483-75444502 Msa1124280:three_prime_UTR 15.0%
!!! TATAATTTTATATACACAAG+TGG - chr7_3:75443566-75443585 None:intergenic 15.0%
!!! AAGTTAATATTTTTCTCATT+CGG + chr7_3:75443655-75443674 Msa1124280:intron 15.0%
!!! GTATTAGTTTAATTTAGTTT+TGG + chr7_3:75444483-75444502 Msa1124280:three_prime_UTR 15.0%
!!! GAATAAAAGTTGTTTGATTT+TGG - chr7_3:75442513-75442532 None:intergenic 20.0%
!!! ACATTAATCCAATTTGTTAA+AGG - chr7_3:75442597-75442616 None:intergenic 20.0%
!!! TATCTTTAACTTAATCAACA+CGG - chr7_3:75443274-75443293 None:intergenic 20.0%
!!! ATTGATTTTTGTTTTACAGT+CGG + chr7_3:75443331-75443350 Msa1124280:three_prime_UTR 20.0%
!! AAGATTAAATTACATTGTGA+TGG + chr7_3:75443374-75443393 Msa1124280:three_prime_UTR 20.0%
!!! TACTAGTTTACTGAAAATAA+AGG - chr7_3:75443465-75443484 None:intergenic 20.0%
!! TAATTACTTGGTTAAAATTG+TGG + chr7_3:75443749-75443768 Msa1124280:intron 20.0%
!! TAAGGTAGAAGTTAATAAAA+TGG + chr7_3:75444013-75444032 Msa1124280:three_prime_UTR 20.0%
!! TATAATTATGTGAATCAAGA+AGG + chr7_3:75444179-75444198 Msa1124280:three_prime_UTR 20.0%
!! ATAATTATGTGAATCAAGAA+GGG + chr7_3:75444180-75444199 Msa1124280:three_prime_UTR 20.0%
!! TATAATTATGTGAATCATCA+AGG + chr7_3:75444245-75444264 Msa1124280:three_prime_UTR 20.0%
!!! TAGAGACATATTTTTGTTTT+TGG + chr7_3:75444419-75444438 Msa1124280:three_prime_UTR 20.0%
!!! GAATAAAAGTTGTTTGATTT+TGG - chr7_3:75442513-75442532 None:intergenic 20.0%
!!! ACATTAATCCAATTTGTTAA+AGG - chr7_3:75442597-75442616 None:intergenic 20.0%
!!! TATCTTTAACTTAATCAACA+CGG - chr7_3:75443274-75443293 None:intergenic 20.0%
!!! ATTGATTTTTGTTTTACAGT+CGG + chr7_3:75443331-75443350 Msa1124280:three_prime_UTR 20.0%
!! AAGATTAAATTACATTGTGA+TGG + chr7_3:75443374-75443393 Msa1124280:three_prime_UTR 20.0%
!!! TACTAGTTTACTGAAAATAA+AGG - chr7_3:75443465-75443484 None:intergenic 20.0%
!! TAATTACTTGGTTAAAATTG+TGG + chr7_3:75443749-75443768 Msa1124280:intron 20.0%
!! TAAGGTAGAAGTTAATAAAA+TGG + chr7_3:75444013-75444032 Msa1124280:three_prime_UTR 20.0%
!! TATAATTATGTGAATCAAGA+AGG + chr7_3:75444179-75444198 Msa1124280:three_prime_UTR 20.0%
!! ATAATTATGTGAATCAAGAA+GGG + chr7_3:75444180-75444199 Msa1124280:three_prime_UTR 20.0%
!! TATAATTATGTGAATCATCA+AGG + chr7_3:75444245-75444264 Msa1124280:three_prime_UTR 20.0%
!!! TAGAGACATATTTTTGTTTT+TGG + chr7_3:75444419-75444438 Msa1124280:three_prime_UTR 20.0%
!! ATTTTCATTTCTTGTGTTTG+TGG - chr7_3:75442349-75442368 None:intergenic 25.0%
! GTAAATTAAGTATGAAGCAA+CGG - chr7_3:75442468-75442487 None:intergenic 25.0%
! ATATACATACACCAACAAAT+GGG + chr7_3:75442533-75442552 Msa1124280:exon 25.0%
!!! ATCCAATTTGTTAAAGGATA+AGG - chr7_3:75442591-75442610 None:intergenic 25.0%
!!! ATAACCGTTAGTTTGTTATT+TGG - chr7_3:75442947-75442966 None:intergenic 25.0%
! AATAACAAACTAACGGTTAT+TGG + chr7_3:75442947-75442966 Msa1124280:CDS 25.0%
! AATGAAATTTCTAACCTGTT+TGG - chr7_3:75443167-75443186 None:intergenic 25.0%
! AAGATTATCCTCAAAATCAA+AGG + chr7_3:75443416-75443435 Msa1124280:three_prime_UTR 25.0%
! TAAGAATAAAGAGAAAGATG+AGG + chr7_3:75443917-75443936 Msa1124280:three_prime_UTR 25.0%
! AAGAATAAAGAGAAAGATGA+GGG + chr7_3:75443918-75443937 Msa1124280:three_prime_UTR 25.0%
! AAATCAAAAGAAGATCAAAG+TGG + chr7_3:75443948-75443967 Msa1124280:three_prime_UTR 25.0%
!! TTAATAAAATGGAGCATCAT+GGG + chr7_3:75444024-75444043 Msa1124280:three_prime_UTR 25.0%
! AATTATAATCATACCCTTGT+TGG - chr7_3:75444232-75444251 None:intergenic 25.0%
!! TTTTCATCACTAAACATTTG+TGG - chr7_3:75444347-75444366 None:intergenic 25.0%
!! ATTTTCATTTCTTGTGTTTG+TGG - chr7_3:75442349-75442368 None:intergenic 25.0%
! GTAAATTAAGTATGAAGCAA+CGG - chr7_3:75442468-75442487 None:intergenic 25.0%
! ATATACATACACCAACAAAT+GGG + chr7_3:75442533-75442552 Msa1124280:exon 25.0%
!!! ATCCAATTTGTTAAAGGATA+AGG - chr7_3:75442591-75442610 None:intergenic 25.0%
!!! ATAACCGTTAGTTTGTTATT+TGG - chr7_3:75442947-75442966 None:intergenic 25.0%
! AATAACAAACTAACGGTTAT+TGG + chr7_3:75442947-75442966 Msa1124280:CDS 25.0%
! AATGAAATTTCTAACCTGTT+TGG - chr7_3:75443167-75443186 None:intergenic 25.0%
! AAGATTATCCTCAAAATCAA+AGG + chr7_3:75443416-75443435 Msa1124280:three_prime_UTR 25.0%
! TAAGAATAAAGAGAAAGATG+AGG + chr7_3:75443917-75443936 Msa1124280:three_prime_UTR 25.0%
! AAGAATAAAGAGAAAGATGA+GGG + chr7_3:75443918-75443937 Msa1124280:three_prime_UTR 25.0%
! AAATCAAAAGAAGATCAAAG+TGG + chr7_3:75443948-75443967 Msa1124280:three_prime_UTR 25.0%
!! TTAATAAAATGGAGCATCAT+GGG + chr7_3:75444024-75444043 Msa1124280:three_prime_UTR 25.0%
! AATTATAATCATACCCTTGT+TGG - chr7_3:75444232-75444251 None:intergenic 25.0%
!! TTTTCATCACTAAACATTTG+TGG - chr7_3:75444347-75444366 None:intergenic 25.0%
AACGGAAACAACGTATATAT+AGG - chr7_3:75442450-75442469 None:intergenic 30.0%
CATATACATACACCAACAAA+TGG + chr7_3:75442532-75442551 Msa1124280:exon 30.0%
CTCCTTATCCTTTAACAAAT+TGG + chr7_3:75442586-75442605 Msa1124280:intron 30.0%
ACTACGATATTCACAATTTC+AGG + chr7_3:75442843-75442862 Msa1124280:intron 30.0%
CTACGATATTCACAATTTCA+GGG + chr7_3:75442844-75442863 Msa1124280:intron 30.0%
TACGCCAAATAACAAACTAA+CGG + chr7_3:75442940-75442959 Msa1124280:CDS 30.0%
CAACTAATAAAGAATACTGC+CGG - chr7_3:75443633-75443652 None:intergenic 30.0%
TCCATGTGGTATTAATTACT+TGG + chr7_3:75443737-75443756 Msa1124280:intron 30.0%
ACCAAGTAATTAATACCACA+TGG - chr7_3:75443741-75443760 None:intergenic 30.0%
TTGGTTAAAATTGTGGTTGT+AGG + chr7_3:75443756-75443775 Msa1124280:intron 30.0%
AAAAGGAACAATAGATGCAA+AGG + chr7_3:75443824-75443843 Msa1124280:three_prime_UTR 30.0%
GGAAATTGTACCATATCTAA+CGG + chr7_3:75443845-75443864 Msa1124280:three_prime_UTR 30.0%
AGAATAAAGAGAAAGATGAG+GGG + chr7_3:75443919-75443938 Msa1124280:three_prime_UTR 30.0%
! GTTAATAAAATGGAGCATCA+TGG + chr7_3:75444023-75444042 Msa1124280:three_prime_UTR 30.0%
TTTGGATGCAAGTAAAATTG+AGG - chr7_3:75444314-75444333 None:intergenic 30.0%
! TCTATCTATGTTTTCCTCAA+TGG - chr7_3:75444403-75444422 None:intergenic 30.0%
TTTGGGGAAAAAGACAAATA+TGG + chr7_3:75444608-75444627 Msa1124280:three_prime_UTR 30.0%
AACGGAAACAACGTATATAT+AGG - chr7_3:75442450-75442469 None:intergenic 30.0%
CATATACATACACCAACAAA+TGG + chr7_3:75442532-75442551 Msa1124280:exon 30.0%
CTCCTTATCCTTTAACAAAT+TGG + chr7_3:75442586-75442605 Msa1124280:intron 30.0%
ACTACGATATTCACAATTTC+AGG + chr7_3:75442843-75442862 Msa1124280:intron 30.0%
CTACGATATTCACAATTTCA+GGG + chr7_3:75442844-75442863 Msa1124280:intron 30.0%
TACGCCAAATAACAAACTAA+CGG + chr7_3:75442940-75442959 Msa1124280:CDS 30.0%
CAACTAATAAAGAATACTGC+CGG - chr7_3:75443633-75443652 None:intergenic 30.0%
TCCATGTGGTATTAATTACT+TGG + chr7_3:75443737-75443756 Msa1124280:intron 30.0%
ACCAAGTAATTAATACCACA+TGG - chr7_3:75443741-75443760 None:intergenic 30.0%
TTGGTTAAAATTGTGGTTGT+AGG + chr7_3:75443756-75443775 Msa1124280:intron 30.0%
AAAAGGAACAATAGATGCAA+AGG + chr7_3:75443824-75443843 Msa1124280:three_prime_UTR 30.0%
GGAAATTGTACCATATCTAA+CGG + chr7_3:75443845-75443864 Msa1124280:three_prime_UTR 30.0%
AGAATAAAGAGAAAGATGAG+GGG + chr7_3:75443919-75443938 Msa1124280:three_prime_UTR 30.0%
! GTTAATAAAATGGAGCATCA+TGG + chr7_3:75444023-75444042 Msa1124280:three_prime_UTR 30.0%
TTTGGATGCAAGTAAAATTG+AGG - chr7_3:75444314-75444333 None:intergenic 30.0%
! TCTATCTATGTTTTCCTCAA+TGG - chr7_3:75444403-75444422 None:intergenic 30.0%
TTTGGGGAAAAAGACAAATA+TGG + chr7_3:75444608-75444627 Msa1124280:three_prime_UTR 30.0%
TCATTTCTTGTGTTTGTGGA+TGG - chr7_3:75442345-75442364 None:intergenic 35.0%
TAGAAATTGTACCGTCGAAA+TGG - chr7_3:75442817-75442836 None:intergenic 35.0%
CAAACTAACGGTTATTGGAA+AGG + chr7_3:75442952-75442971 Msa1124280:CDS 35.0%
!!! TCAGATTTTTTGTCTTCGTC+CGG - chr7_3:75443103-75443122 None:intergenic 35.0%
! TGTTTGGAGGATTTTTCTTC+GGG - chr7_3:75443151-75443170 None:intergenic 35.0%
! CTGTTTGGAGGATTTTTCTT+CGG - chr7_3:75443152-75443171 None:intergenic 35.0%
GAAATTTCTAACCTGTTTGG+AGG - chr7_3:75443164-75443183 None:intergenic 35.0%
! TTTACAGTCGGTTCAAAACA+CGG + chr7_3:75443343-75443362 Msa1124280:three_prime_UTR 35.0%
!! TTGGCTAACCTTTGATTTTG+AGG - chr7_3:75443427-75443446 None:intergenic 35.0%
! TTAGCCAATAGCTAGCATTT+TGG + chr7_3:75443439-75443458 Msa1124280:intron 35.0%
AATCAGTGACAAGTGATGAA+GGG + chr7_3:75443784-75443803 Msa1124280:three_prime_UTR 35.0%
TTCTTACCATCCTCTTTCTT+TGG - chr7_3:75443903-75443922 None:intergenic 35.0%
TCAAAAGAAGATCAAAGTGG+TGG + chr7_3:75443951-75443970 Msa1124280:three_prime_UTR 35.0%
GGTTGCTGATATTGATATTG+AGG - chr7_3:75444293-75444312 None:intergenic 35.0%
TCATCACTAAACATTTGTGG+AGG - chr7_3:75444344-75444363 None:intergenic 35.0%
ATGGTAAAATGCTCACATCA+TGG - chr7_3:75444384-75444403 None:intergenic 35.0%
! ATGTGAGCATTTTACCATTG+AGG + chr7_3:75444386-75444405 Msa1124280:three_prime_UTR 35.0%
ATATAGTTGAACTGTGCCAT+TGG + chr7_3:75444543-75444562 Msa1124280:three_prime_UTR 35.0%
! CTAGATGAGAATCCAGTTTT+GGG + chr7_3:75444591-75444610 Msa1124280:three_prime_UTR 35.0%
! TAGATGAGAATCCAGTTTTG+GGG + chr7_3:75444592-75444611 Msa1124280:three_prime_UTR 35.0%
! TTTGTCTTTTTCCCCAAAAC+TGG - chr7_3:75444606-75444625 None:intergenic 35.0%
TCATTTCTTGTGTTTGTGGA+TGG - chr7_3:75442345-75442364 None:intergenic 35.0%
TAGAAATTGTACCGTCGAAA+TGG - chr7_3:75442817-75442836 None:intergenic 35.0%
CAAACTAACGGTTATTGGAA+AGG + chr7_3:75442952-75442971 Msa1124280:CDS 35.0%
!!! TCAGATTTTTTGTCTTCGTC+CGG - chr7_3:75443103-75443122 None:intergenic 35.0%
! TGTTTGGAGGATTTTTCTTC+GGG - chr7_3:75443151-75443170 None:intergenic 35.0%
! CTGTTTGGAGGATTTTTCTT+CGG - chr7_3:75443152-75443171 None:intergenic 35.0%
GAAATTTCTAACCTGTTTGG+AGG - chr7_3:75443164-75443183 None:intergenic 35.0%
! TTTACAGTCGGTTCAAAACA+CGG + chr7_3:75443343-75443362 Msa1124280:three_prime_UTR 35.0%
!! TTGGCTAACCTTTGATTTTG+AGG - chr7_3:75443427-75443446 None:intergenic 35.0%
! TTAGCCAATAGCTAGCATTT+TGG + chr7_3:75443439-75443458 Msa1124280:intron 35.0%
AATCAGTGACAAGTGATGAA+GGG + chr7_3:75443784-75443803 Msa1124280:three_prime_UTR 35.0%
TTCTTACCATCCTCTTTCTT+TGG - chr7_3:75443903-75443922 None:intergenic 35.0%
TCAAAAGAAGATCAAAGTGG+TGG + chr7_3:75443951-75443970 Msa1124280:three_prime_UTR 35.0%
GGTTGCTGATATTGATATTG+AGG - chr7_3:75444293-75444312 None:intergenic 35.0%
TCATCACTAAACATTTGTGG+AGG - chr7_3:75444344-75444363 None:intergenic 35.0%
ATGGTAAAATGCTCACATCA+TGG - chr7_3:75444384-75444403 None:intergenic 35.0%
! ATGTGAGCATTTTACCATTG+AGG + chr7_3:75444386-75444405 Msa1124280:three_prime_UTR 35.0%
ATATAGTTGAACTGTGCCAT+TGG + chr7_3:75444543-75444562 Msa1124280:three_prime_UTR 35.0%
! CTAGATGAGAATCCAGTTTT+GGG + chr7_3:75444591-75444610 Msa1124280:three_prime_UTR 35.0%
! TAGATGAGAATCCAGTTTTG+GGG + chr7_3:75444592-75444611 Msa1124280:three_prime_UTR 35.0%
! TTTGTCTTTTTCCCCAAAAC+TGG - chr7_3:75444606-75444625 None:intergenic 35.0%
AACTAACCTGACCCATTTGT+TGG - chr7_3:75442547-75442566 None:intergenic 40.0%
CCAGTTTCAAAACGACAGAA+GGG - chr7_3:75442748-75442767 None:intergenic 40.0%
TCCAGTTTCAAAACGACAGA+AGG - chr7_3:75442749-75442768 None:intergenic 40.0%
AAACTGGACTTACATTGCGA+AGG + chr7_3:75442761-75442780 Msa1124280:CDS 40.0%
!! CGATGATGAATTGATGATGC+AGG + chr7_3:75442896-75442915 Msa1124280:intron 40.0%
!! ATGAATTGATGATGCAGGTG+TGG + chr7_3:75442901-75442920 Msa1124280:intron 40.0%
AGTTTATCACGAACCTTGTG+AGG - chr7_3:75442983-75443002 None:intergenic 40.0%
TCACAAGGTTCGTGATAAAC+TGG + chr7_3:75442982-75443001 Msa1124280:CDS 40.0%
GGCGGAGAAAATTAAGAAGA+AGG + chr7_3:75443003-75443022 Msa1124280:CDS 40.0%
GGACGAAGACAAAAAATCTG+AGG + chr7_3:75443102-75443121 Msa1124280:CDS 40.0%
ATCTGAGGAGAAAAAAACCG+AGG + chr7_3:75443117-75443136 Msa1124280:CDS 40.0%
CGAAGAAAAATCCTCCAAAC+AGG + chr7_3:75443150-75443169 Msa1124280:CDS 40.0%
TTTCTTCGATACCGTTAGCA+GGG + chr7_3:75443189-75443208 Msa1124280:CDS 40.0%
! TTTGATTTCGTCCCTGCTAA+CGG - chr7_3:75443203-75443222 None:intergenic 40.0%
AAGGCCAAAATGCTAGCTAT+TGG - chr7_3:75443446-75443465 None:intergenic 40.0%
TCGTTTGAGCTAAGGGATAA+AGG - chr7_3:75443708-75443727 None:intergenic 40.0%
GAATCAGTGACAAGTGATGA+AGG + chr7_3:75443783-75443802 Msa1124280:three_prime_UTR 40.0%
AAGTGATGAAGGGAAGGATT+TGG + chr7_3:75443794-75443813 Msa1124280:three_prime_UTR 40.0%
!! AAGGATTTGGTGACGGTAAA+AGG + chr7_3:75443807-75443826 Msa1124280:three_prime_UTR 40.0%
TTCAGCTTCTCCGTTAGATA+TGG - chr7_3:75443858-75443877 None:intergenic 40.0%
TGTGGTTCAACCAAAGAAAG+AGG + chr7_3:75443890-75443909 Msa1124280:three_prime_UTR 40.0%
GTTCAACCAAAGAAAGAGGA+TGG + chr7_3:75443894-75443913 Msa1124280:three_prime_UTR 40.0%
GAAAGAGGGAGAAAAAGCAA+AGG + chr7_3:75443980-75443999 Msa1124280:three_prime_UTR 40.0%
! AAAATGGAGCATCATGGGTA+CGG + chr7_3:75444029-75444048 Msa1124280:three_prime_UTR 40.0%
CACATCAAACTCCTATGTAC+TGG + chr7_3:75444057-75444076 Msa1124280:three_prime_UTR 40.0%
! ACTTGATGATTCGAATACCC+CGG - chr7_3:75444152-75444171 None:intergenic 40.0%
TATGTGAACCAACACCAACA+AGG + chr7_3:75444215-75444234 Msa1124280:three_prime_UTR 40.0%
ATGTGAACCAACACCAACAA+GGG + chr7_3:75444216-75444235 Msa1124280:three_prime_UTR 40.0%
AATCATACCCTTGTTGGTGT+TGG - chr7_3:75444226-75444245 None:intergenic 40.0%
TATGTGAATCATCAAGGCCA+AGG + chr7_3:75444251-75444270 Msa1124280:three_prime_UTR 40.0%
! ATTTGTGGAGGAGGTTGATT+TGG - chr7_3:75444332-75444351 None:intergenic 40.0%
TCACTAAACATTTGTGGAGG+AGG - chr7_3:75444341-75444360 None:intergenic 40.0%
CACATCATGGAACAAGCATT+CGG - chr7_3:75444371-75444390 None:intergenic 40.0%
AAACTGGATTCTCATCTAGC+AGG - chr7_3:75444590-75444609 None:intergenic 40.0%
! GCTAGATGAGAATCCAGTTT+TGG + chr7_3:75444590-75444609 Msa1124280:three_prime_UTR 40.0%
AACTAACCTGACCCATTTGT+TGG - chr7_3:75442547-75442566 None:intergenic 40.0%
CCAGTTTCAAAACGACAGAA+GGG - chr7_3:75442748-75442767 None:intergenic 40.0%
TCCAGTTTCAAAACGACAGA+AGG - chr7_3:75442749-75442768 None:intergenic 40.0%
AAACTGGACTTACATTGCGA+AGG + chr7_3:75442761-75442780 Msa1124280:CDS 40.0%
!! CGATGATGAATTGATGATGC+AGG + chr7_3:75442896-75442915 Msa1124280:intron 40.0%
!! ATGAATTGATGATGCAGGTG+TGG + chr7_3:75442901-75442920 Msa1124280:intron 40.0%
AGTTTATCACGAACCTTGTG+AGG - chr7_3:75442983-75443002 None:intergenic 40.0%
TCACAAGGTTCGTGATAAAC+TGG + chr7_3:75442982-75443001 Msa1124280:CDS 40.0%
GGCGGAGAAAATTAAGAAGA+AGG + chr7_3:75443003-75443022 Msa1124280:CDS 40.0%
GGACGAAGACAAAAAATCTG+AGG + chr7_3:75443102-75443121 Msa1124280:CDS 40.0%
ATCTGAGGAGAAAAAAACCG+AGG + chr7_3:75443117-75443136 Msa1124280:CDS 40.0%
CGAAGAAAAATCCTCCAAAC+AGG + chr7_3:75443150-75443169 Msa1124280:CDS 40.0%
TTTCTTCGATACCGTTAGCA+GGG + chr7_3:75443189-75443208 Msa1124280:CDS 40.0%
! TTTGATTTCGTCCCTGCTAA+CGG - chr7_3:75443203-75443222 None:intergenic 40.0%
AAGGCCAAAATGCTAGCTAT+TGG - chr7_3:75443446-75443465 None:intergenic 40.0%
TCGTTTGAGCTAAGGGATAA+AGG - chr7_3:75443708-75443727 None:intergenic 40.0%
GAATCAGTGACAAGTGATGA+AGG + chr7_3:75443783-75443802 Msa1124280:three_prime_UTR 40.0%
AAGTGATGAAGGGAAGGATT+TGG + chr7_3:75443794-75443813 Msa1124280:three_prime_UTR 40.0%
!! AAGGATTTGGTGACGGTAAA+AGG + chr7_3:75443807-75443826 Msa1124280:three_prime_UTR 40.0%
TTCAGCTTCTCCGTTAGATA+TGG - chr7_3:75443858-75443877 None:intergenic 40.0%
TGTGGTTCAACCAAAGAAAG+AGG + chr7_3:75443890-75443909 Msa1124280:three_prime_UTR 40.0%
GTTCAACCAAAGAAAGAGGA+TGG + chr7_3:75443894-75443913 Msa1124280:three_prime_UTR 40.0%
GAAAGAGGGAGAAAAAGCAA+AGG + chr7_3:75443980-75443999 Msa1124280:three_prime_UTR 40.0%
! AAAATGGAGCATCATGGGTA+CGG + chr7_3:75444029-75444048 Msa1124280:three_prime_UTR 40.0%
CACATCAAACTCCTATGTAC+TGG + chr7_3:75444057-75444076 Msa1124280:three_prime_UTR 40.0%
! ACTTGATGATTCGAATACCC+CGG - chr7_3:75444152-75444171 None:intergenic 40.0%
TATGTGAACCAACACCAACA+AGG + chr7_3:75444215-75444234 Msa1124280:three_prime_UTR 40.0%
ATGTGAACCAACACCAACAA+GGG + chr7_3:75444216-75444235 Msa1124280:three_prime_UTR 40.0%
AATCATACCCTTGTTGGTGT+TGG - chr7_3:75444226-75444245 None:intergenic 40.0%
TATGTGAATCATCAAGGCCA+AGG + chr7_3:75444251-75444270 Msa1124280:three_prime_UTR 40.0%
! ATTTGTGGAGGAGGTTGATT+TGG - chr7_3:75444332-75444351 None:intergenic 40.0%
TCACTAAACATTTGTGGAGG+AGG - chr7_3:75444341-75444360 None:intergenic 40.0%
CACATCATGGAACAAGCATT+CGG - chr7_3:75444371-75444390 None:intergenic 40.0%
AAACTGGATTCTCATCTAGC+AGG - chr7_3:75444590-75444609 None:intergenic 40.0%
! GCTAGATGAGAATCCAGTTT+TGG + chr7_3:75444590-75444609 Msa1124280:three_prime_UTR 40.0%
ATGAGTCACAATCAGTGAGG+TGG - chr7_3:75442401-75442420 None:intergenic 45.0%
TGGATGAGTCACAATCAGTG+AGG - chr7_3:75442404-75442423 None:intergenic 45.0%
AGAGTCAAAGAGAGTGACTG+TGG - chr7_3:75442424-75442443 None:intergenic 45.0%
CATACACCAACAAATGGGTC+AGG + chr7_3:75442538-75442557 Msa1124280:exon 45.0%
!!! CCCTTCTGTCGTTTTGAAAC+TGG + chr7_3:75442745-75442764 Msa1124280:CDS 45.0%
TGTCAAGAAGATCAAACGCG+CGG + chr7_3:75442787-75442806 Msa1124280:CDS 45.0%
TGGAAAGGTAGATCCTCACA+AGG + chr7_3:75442967-75442986 Msa1124280:CDS 45.0%
CAAGGTTCGTGATAAACTGG+CGG + chr7_3:75442985-75443004 Msa1124280:CDS 45.0%
!!! GTCTTTTTTAGGCTGAGGGA+AGG - chr7_3:75443041-75443060 None:intergenic 45.0%
CTTCTCCTGAGGTTTATCTG+CGG - chr7_3:75443074-75443093 None:intergenic 45.0%
ACCTCAGGAGAAGAAGAAAC+CGG + chr7_3:75443081-75443100 Msa1124280:CDS 45.0%
! TTCTTCGGGTTTCTTCTCCT+CGG - chr7_3:75443137-75443156 None:intergenic 45.0%
CTTTCTTCGATACCGTTAGC+AGG + chr7_3:75443188-75443207 Msa1124280:CDS 45.0%
TTAGTGAGAACAAAGCGTGG+AGG - chr7_3:75443303-75443322 None:intergenic 45.0%
GAGTAGCTCGTTTGAGCTAA+GGG - chr7_3:75443715-75443734 None:intergenic 45.0%
TGAGTAGCTCGTTTGAGCTA+AGG - chr7_3:75443716-75443735 None:intergenic 45.0%
AACGAGCTACTCAATCCATG+TGG + chr7_3:75443723-75443742 Msa1124280:intron 45.0%
AGTGACAAGTGATGAAGGGA+AGG + chr7_3:75443788-75443807 Msa1124280:three_prime_UTR 45.0%
!! TGAAGGGAAGGATTTGGTGA+CGG + chr7_3:75443800-75443819 Msa1124280:three_prime_UTR 45.0%
ATCTAACGGAGAAGCTGAAG+CGG + chr7_3:75443859-75443878 Msa1124280:three_prime_UTR 45.0%
! AAGTGGTGGTGAGAAGAAAG+AGG + chr7_3:75443965-75443984 Msa1124280:three_prime_UTR 45.0%
! AGTGGTGGTGAGAAGAAAGA+GGG + chr7_3:75443966-75443985 Msa1124280:three_prime_UTR 45.0%
GAGGGAGAAAAAGCAAAGGA+AGG + chr7_3:75443984-75444003 Msa1124280:three_prime_UTR 45.0%
GGAGAAAAAGCAAAGGAAGG+CGG + chr7_3:75443987-75444006 Msa1124280:three_prime_UTR 45.0%
! AAATGGAGCATCATGGGTAC+GGG + chr7_3:75444030-75444049 Msa1124280:three_prime_UTR 45.0%
! ACTCCTATGTACTGGTACGA+CGG + chr7_3:75444065-75444084 Msa1124280:three_prime_UTR 45.0%
TATCCGTCGTACCAGTACAT+AGG - chr7_3:75444071-75444090 None:intergenic 45.0%
TGAATCATCAAGGCCAAGGT+GGG + chr7_3:75444255-75444274 Msa1124280:three_prime_UTR 45.0%
ATGAGTCACAATCAGTGAGG+TGG - chr7_3:75442401-75442420 None:intergenic 45.0%
TGGATGAGTCACAATCAGTG+AGG - chr7_3:75442404-75442423 None:intergenic 45.0%
AGAGTCAAAGAGAGTGACTG+TGG - chr7_3:75442424-75442443 None:intergenic 45.0%
CATACACCAACAAATGGGTC+AGG + chr7_3:75442538-75442557 Msa1124280:exon 45.0%
!!! CCCTTCTGTCGTTTTGAAAC+TGG + chr7_3:75442745-75442764 Msa1124280:CDS 45.0%
TGTCAAGAAGATCAAACGCG+CGG + chr7_3:75442787-75442806 Msa1124280:CDS 45.0%
TGGAAAGGTAGATCCTCACA+AGG + chr7_3:75442967-75442986 Msa1124280:CDS 45.0%
CAAGGTTCGTGATAAACTGG+CGG + chr7_3:75442985-75443004 Msa1124280:CDS 45.0%
!!! GTCTTTTTTAGGCTGAGGGA+AGG - chr7_3:75443041-75443060 None:intergenic 45.0%
CTTCTCCTGAGGTTTATCTG+CGG - chr7_3:75443074-75443093 None:intergenic 45.0%
ACCTCAGGAGAAGAAGAAAC+CGG + chr7_3:75443081-75443100 Msa1124280:CDS 45.0%
! TTCTTCGGGTTTCTTCTCCT+CGG - chr7_3:75443137-75443156 None:intergenic 45.0%
CTTTCTTCGATACCGTTAGC+AGG + chr7_3:75443188-75443207 Msa1124280:CDS 45.0%
TTAGTGAGAACAAAGCGTGG+AGG - chr7_3:75443303-75443322 None:intergenic 45.0%
GAGTAGCTCGTTTGAGCTAA+GGG - chr7_3:75443715-75443734 None:intergenic 45.0%
TGAGTAGCTCGTTTGAGCTA+AGG - chr7_3:75443716-75443735 None:intergenic 45.0%
AACGAGCTACTCAATCCATG+TGG + chr7_3:75443723-75443742 Msa1124280:intron 45.0%
AGTGACAAGTGATGAAGGGA+AGG + chr7_3:75443788-75443807 Msa1124280:three_prime_UTR 45.0%
!! TGAAGGGAAGGATTTGGTGA+CGG + chr7_3:75443800-75443819 Msa1124280:three_prime_UTR 45.0%
ATCTAACGGAGAAGCTGAAG+CGG + chr7_3:75443859-75443878 Msa1124280:three_prime_UTR 45.0%
! AAGTGGTGGTGAGAAGAAAG+AGG + chr7_3:75443965-75443984 Msa1124280:three_prime_UTR 45.0%
! AGTGGTGGTGAGAAGAAAGA+GGG + chr7_3:75443966-75443985 Msa1124280:three_prime_UTR 45.0%
GAGGGAGAAAAAGCAAAGGA+AGG + chr7_3:75443984-75444003 Msa1124280:three_prime_UTR 45.0%
GGAGAAAAAGCAAAGGAAGG+CGG + chr7_3:75443987-75444006 Msa1124280:three_prime_UTR 45.0%
! AAATGGAGCATCATGGGTAC+GGG + chr7_3:75444030-75444049 Msa1124280:three_prime_UTR 45.0%
! ACTCCTATGTACTGGTACGA+CGG + chr7_3:75444065-75444084 Msa1124280:three_prime_UTR 45.0%
TATCCGTCGTACCAGTACAT+AGG - chr7_3:75444071-75444090 None:intergenic 45.0%
TGAATCATCAAGGCCAAGGT+GGG + chr7_3:75444255-75444274 Msa1124280:three_prime_UTR 45.0%
!!! TAATTATTATTTTTTTAATC+CGG + chr7_3:75443611-75443630 Msa1124280:intron 5.0%
!!! GTTTTTTTATATAATAAATT+AGG + chr7_3:75444510-75444529 Msa1124280:three_prime_UTR 5.0%
!!! ATATATAAATAAATCATTTT+TGG + chr7_3:75444696-75444715 Msa1124280:three_prime_UTR 5.0%
!!! TAATTATTATTTTTTTAATC+CGG + chr7_3:75443611-75443630 Msa1124280:intron 5.0%
!!! GTTTTTTTATATAATAAATT+AGG + chr7_3:75444510-75444529 Msa1124280:three_prime_UTR 5.0%
!!! ATATATAAATAAATCATTTT+TGG + chr7_3:75444696-75444715 Msa1124280:three_prime_UTR 5.0%
!!! CGGCGTCTTTTTTAGGCTGA+GGG - chr7_3:75443045-75443064 None:intergenic 50.0%
TCCGGTTTCTTCTTCTCCTG+AGG - chr7_3:75443085-75443104 None:intergenic 50.0%
CGGTTAGTGAGAACAAAGCG+TGG - chr7_3:75443306-75443325 None:intergenic 50.0%
AGCAAAGGAAGGCGGAACTA+AGG + chr7_3:75443995-75444014 Msa1124280:three_prime_UTR 50.0%
CTGGTACGACGGATATGAAC+CGG + chr7_3:75444076-75444095 Msa1124280:three_prime_UTR 50.0%
TGGTACGACGGATATGAACC+GGG + chr7_3:75444077-75444096 Msa1124280:three_prime_UTR 50.0%
GAACCGGGTCAAAGTAGTAG+TGG + chr7_3:75444092-75444111 Msa1124280:three_prime_UTR 50.0%
CCACCACTACTACTTTGACC+CGG - chr7_3:75444098-75444117 None:intergenic 50.0%
GGTCAAAGTAGTAGTGGTGG+TGG + chr7_3:75444098-75444117 Msa1124280:three_prime_UTR 50.0%
GTGAATCATCAAGGCCAAGG+TGG + chr7_3:75444254-75444273 Msa1124280:three_prime_UTR 50.0%
!!! CGGCGTCTTTTTTAGGCTGA+GGG - chr7_3:75443045-75443064 None:intergenic 50.0%
TCCGGTTTCTTCTTCTCCTG+AGG - chr7_3:75443085-75443104 None:intergenic 50.0%
CGGTTAGTGAGAACAAAGCG+TGG - chr7_3:75443306-75443325 None:intergenic 50.0%
AGCAAAGGAAGGCGGAACTA+AGG + chr7_3:75443995-75444014 Msa1124280:three_prime_UTR 50.0%
CTGGTACGACGGATATGAAC+CGG + chr7_3:75444076-75444095 Msa1124280:three_prime_UTR 50.0%
TGGTACGACGGATATGAACC+GGG + chr7_3:75444077-75444096 Msa1124280:three_prime_UTR 50.0%
GAACCGGGTCAAAGTAGTAG+TGG + chr7_3:75444092-75444111 Msa1124280:three_prime_UTR 50.0%
CCACCACTACTACTTTGACC+CGG - chr7_3:75444098-75444117 None:intergenic 50.0%
GGTCAAAGTAGTAGTGGTGG+TGG + chr7_3:75444098-75444117 Msa1124280:three_prime_UTR 50.0%
GTGAATCATCAAGGCCAAGG+TGG + chr7_3:75444254-75444273 Msa1124280:three_prime_UTR 50.0%
!!! GCGGCGTCTTTTTTAGGCTG+AGG - chr7_3:75443046-75443065 None:intergenic 55.0%
TCCTGAGGTTTATCTGCGGC+GGG - chr7_3:75443070-75443089 None:intergenic 55.0%
CTCCTGAGGTTTATCTGCGG+CGG - chr7_3:75443071-75443090 None:intergenic 55.0%
GGAGAAGCTGAAGCGGAATG+TGG + chr7_3:75443866-75443885 Msa1124280:three_prime_UTR 55.0%
GCTGAAGCGGAATGTGGATG+TGG + chr7_3:75443872-75443891 Msa1124280:three_prime_UTR 55.0%
CCGGGTCAAAGTAGTAGTGG+TGG + chr7_3:75444095-75444114 Msa1124280:three_prime_UTR 55.0%
CTACGCGATGCAAGTTCAGC+CGG + chr7_3:75444130-75444149 Msa1124280:three_prime_UTR 55.0%
TACGCGATGCAAGTTCAGCC+GGG + chr7_3:75444131-75444150 Msa1124280:three_prime_UTR 55.0%
TCAAGGCCAAGGTGGGCATA+TGG + chr7_3:75444262-75444281 Msa1124280:three_prime_UTR 55.0%
GTTCCACCATATGCCCACCT+TGG - chr7_3:75444271-75444290 None:intergenic 55.0%
! TGAACTGTGCCATTGGCGCA+TGG + chr7_3:75444550-75444569 Msa1124280:three_prime_UTR 55.0%
CGTCACTAACCATGCGCCAA+TGG - chr7_3:75444562-75444581 None:intergenic 55.0%
GGCGCATGGTTAGTGACGTA+CGG + chr7_3:75444564-75444583 Msa1124280:three_prime_UTR 55.0%
!!! GCGGCGTCTTTTTTAGGCTG+AGG - chr7_3:75443046-75443065 None:intergenic 55.0%
TCCTGAGGTTTATCTGCGGC+GGG - chr7_3:75443070-75443089 None:intergenic 55.0%
CTCCTGAGGTTTATCTGCGG+CGG - chr7_3:75443071-75443090 None:intergenic 55.0%
GGAGAAGCTGAAGCGGAATG+TGG + chr7_3:75443866-75443885 Msa1124280:three_prime_UTR 55.0%
GCTGAAGCGGAATGTGGATG+TGG + chr7_3:75443872-75443891 Msa1124280:three_prime_UTR 55.0%
CCGGGTCAAAGTAGTAGTGG+TGG + chr7_3:75444095-75444114 Msa1124280:three_prime_UTR 55.0%
CTACGCGATGCAAGTTCAGC+CGG + chr7_3:75444130-75444149 Msa1124280:three_prime_UTR 55.0%
TACGCGATGCAAGTTCAGCC+GGG + chr7_3:75444131-75444150 Msa1124280:three_prime_UTR 55.0%
TCAAGGCCAAGGTGGGCATA+TGG + chr7_3:75444262-75444281 Msa1124280:three_prime_UTR 55.0%
GTTCCACCATATGCCCACCT+TGG - chr7_3:75444271-75444290 None:intergenic 55.0%
! TGAACTGTGCCATTGGCGCA+TGG + chr7_3:75444550-75444569 Msa1124280:three_prime_UTR 55.0%
CGTCACTAACCATGCGCCAA+TGG - chr7_3:75444562-75444581 None:intergenic 55.0%
GGCGCATGGTTAGTGACGTA+CGG + chr7_3:75444564-75444583 Msa1124280:three_prime_UTR 55.0%
CTGAGGTTTATCTGCGGCGG+GGG - chr7_3:75443068-75443087 None:intergenic 60.0%
CCTGAGGTTTATCTGCGGCG+GGG - chr7_3:75443069-75443088 None:intergenic 60.0%
ACGCGATGCAAGTTCAGCCG+GGG + chr7_3:75444132-75444151 Msa1124280:three_prime_UTR 60.0%
AGGCCAAGGTGGGCATATGG+TGG + chr7_3:75444265-75444284 Msa1124280:three_prime_UTR 60.0%
CTGAGGTTTATCTGCGGCGG+GGG - chr7_3:75443068-75443087 None:intergenic 60.0%
CCTGAGGTTTATCTGCGGCG+GGG - chr7_3:75443069-75443088 None:intergenic 60.0%
ACGCGATGCAAGTTCAGCCG+GGG + chr7_3:75444132-75444151 Msa1124280:three_prime_UTR 60.0%
AGGCCAAGGTGGGCATATGG+TGG + chr7_3:75444265-75444284 Msa1124280:three_prime_UTR 60.0%
CGCGCGGTTCGCCATTTCGA+CGG + chr7_3:75442803-75442822 Msa1124280:CDS 65.0%
!!! GCGGGGGCGGCGTCTTTTTT+AGG - chr7_3:75443052-75443071 None:intergenic 65.0%
AGGTTTATCTGCGGCGGGGG+CGG - chr7_3:75443065-75443084 None:intergenic 65.0%
CCCCGCCGCAGATAAACCTC+AGG + chr7_3:75443066-75443085 Msa1124280:CDS 65.0%
CGCGCGGTTCGCCATTTCGA+CGG + chr7_3:75442803-75442822 Msa1124280:CDS 65.0%
!!! GCGGGGGCGGCGTCTTTTTT+AGG - chr7_3:75443052-75443071 None:intergenic 65.0%
AGGTTTATCTGCGGCGGGGG+CGG - chr7_3:75443065-75443084 None:intergenic 65.0%
CCCCGCCGCAGATAAACCTC+AGG + chr7_3:75443066-75443085 Msa1124280:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 75442335 75444723 75442335 ID=Msa1124280;Name=Msa1124280
chr7_3 mRNA 75442335 75444723 75442335 ID=Msa1124280-mRNA-1;Parent=Msa1124280;Name=Msa1124280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=216|1|1|1|1|0.75|4|1104|158
chr7_3 exon 75442335 75442559 75442335 ID=Msa1124280-mRNA-1:exon:20297;Parent=Msa1124280-mRNA-1
chr7_3 exon 75442719 75442824 75442719 ID=Msa1124280-mRNA-1:exon:20298;Parent=Msa1124280-mRNA-1
chr7_3 exon 75442918 75443437 75442918 ID=Msa1124280-mRNA-1:exon:20299;Parent=Msa1124280-mRNA-1
chr7_3 exon 75443778 75444723 75443778 ID=Msa1124280-mRNA-1:exon:20300;Parent=Msa1124280-mRNA-1
chr7_3 five_prime_UTR 75442335 75442550 75442335 ID=Msa1124280-mRNA-1:five_prime_utr;Parent=Msa1124280-mRNA-1
chr7_3 CDS 75442551 75442559 75442551 ID=Msa1124280-mRNA-1:cds;Parent=Msa1124280-mRNA-1
chr7_3 CDS 75442719 75442824 75442719 ID=Msa1124280-mRNA-1:cds;Parent=Msa1124280-mRNA-1
chr7_3 CDS 75442918 75443279 75442918 ID=Msa1124280-mRNA-1:cds;Parent=Msa1124280-mRNA-1
chr7_3 three_prime_UTR 75443280 75443437 75443280 ID=Msa1124280-mRNA-1:three_prime_utr;Parent=Msa1124280-mRNA-1
chr7_3 three_prime_UTR 75443778 75444723 75443778 ID=Msa1124280-mRNA-1:three_prime_utr;Parent=Msa1124280-mRNA-1
Gene Sequence

>Msa1124280

ATGGGTCAGAAAGATGAGATAAAAAACGACGATATCCCTTCTGTCGTTTTGAAACTGGACTTACATTGCGAAGGATGTGTCAAGAAGATCAAACGCGCGGTTCGCCATTTCGACGGTGTGGAAGTCGTTAAAGCAGATACGCCAAATAACAAACTAACGGTTATTGGAAAGGTAGATCCTCACAAGGTTCGTGATAAACTGGCGGAGAAAATTAAGAAGAAGGTTGAGCTTGTTTCCTTCCCTCAGCCTAAAAAAGACGCCGCCCCCGCCGCAGATAAACCTCAGGAGAAGAAGAAACCGGACGAAGACAAAAAATCTGAGGAGAAAAAAACCGAGGAGAAGAAACCCGAAGAAAAATCCTCCAAACAGGTTAGAAATTTCATTACTTTCTTCGATACCGTTAGCAGGGACGAAATCAAAATAAATTTCATCGCAATTGATTCAGAATTGACTCGTTTTCTTCTTTTTCCGTGTTGA
Protein sequence

>Msa1124280

MGQKDEIKNDDIPSVVLKLDLHCEGCVKKIKRAVRHFDGVEVVKADTPNNKLTVIGKVDPHKVRDKLAEKIKKKVELVSFPQPKKDAAPAADKPQEKKKPDEDKKSEEKKTEEKKPEEKSSKQVRNFITFFDTVSRDEIKINFIAIDSELTRFLLFPC*