AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1129370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129370 MtrunA17_Chr7g0274101 97.315 149 4 0 1 149 1 149 7.24e-101 285
Msa1129370 MtrunA17_Chr1g0188171 67.785 149 48 0 1 149 1 149 4.23e-70 207
Msa1129370 MtrunA17_Chr1g0166281 66.443 149 50 0 1 149 1 149 3.47e-69 205
Msa1129370 MtrunA17_Chr5g0440931 64.189 148 53 0 1 148 1 148 3.90e-67 200
Msa1129370 MtrunA17_Chr6g0460211 63.514 148 54 0 1 148 1 148 1.15e-66 199
Msa1129370 MtrunA17_Chr3g0093271 63.514 148 54 0 1 148 52 199 4.22e-66 199
Msa1129370 MtrunA17_Chr7g0254731 62.838 148 55 0 1 148 1 148 5.39e-65 195
Msa1129370 MtrunA17_Chr1g0185001 52.381 147 69 1 1 147 1 146 5.17e-48 152
Msa1129370 MtrunA17_Chr8g0366401 39.865 148 86 1 5 149 10 157 4.21e-34 117
Msa1129370 MtrunA17_Chr5g0398751 36.806 144 89 1 5 148 5 146 3.86e-30 106
Msa1129370 MtrunA17_Chr3g0100541 42.361 144 68 1 1 144 41 169 5.87e-30 107
Msa1129370 MtrunA17_Chr8g0368681 36.486 148 92 1 1 146 1 148 1.96e-28 102
Msa1129370 MtrunA17_Chr4g0062221 34.694 147 88 2 5 146 4 147 1.39e-27 100
Msa1129370 MtrunA17_Chr1g0161211 39.552 134 81 0 15 148 49 182 1.41e-27 101
Msa1129370 MtrunA17_Chr7g0245231 37.762 143 89 0 4 146 22 164 1.90e-27 100
Msa1129370 MtrunA17_Chr7g0245231 44.615 65 36 0 84 148 29 93 7.87e-12 59.7
Msa1129370 MtrunA17_Chr8g0392951 40.741 135 79 1 12 146 24 157 1.02e-26 98.2
Msa1129370 MtrunA17_Chr1g0169581 37.226 137 84 1 12 146 4 140 7.22e-26 95.5
Msa1129370 MtrunA17_Chr1g0169581 44.262 61 34 0 83 143 2 62 9.66e-11 56.2
Msa1129370 MtrunA17_Chr6g0450921 38.519 135 83 0 12 146 29 163 8.34e-26 96.3
Msa1129370 MtrunA17_Chr6g0450921 41.176 85 49 1 65 148 8 92 1.31e-12 62.0
Msa1129370 MtrunA17_Chr7g0256701 41.429 140 77 3 12 146 73 212 1.45e-25 96.7
Msa1129370 MtrunA17_Chr8g0391691 37.956 137 85 0 6 142 30 166 4.03e-25 95.1
Msa1129370 MtrunA17_Chr4g0033601 38.686 137 82 1 12 146 5 141 6.43e-24 90.9
Msa1129370 MtrunA17_Chr6g0482731 39.130 138 82 2 12 148 26 162 1.03e-23 90.9
Msa1129370 MtrunA17_Chr1g0200601 40.141 142 82 2 5 146 328 466 4.27e-23 94.0
Msa1129370 MtrunA17_Chr5g0434951 37.692 130 80 1 17 146 9 137 4.57e-23 88.2
Msa1129370 MtrunA17_Chr5g0402331 37.037 135 77 3 17 147 53 183 4.75e-23 89.7
Msa1129370 MtrunA17_Chr3g0100511 38.621 145 74 1 1 145 41 170 6.48e-23 89.0
Msa1129370 MtrunA17_Chr5g0402361 38.806 134 75 2 17 147 53 182 1.83e-22 91.3
Msa1129370 MtrunA17_Chr5g0402361 37.410 139 71 4 17 147 225 355 1.00e-21 89.4
Msa1129370 MtrunA17_Chr5g0402361 29.586 169 88 4 5 145 116 281 8.84e-13 64.3
Msa1129370 MtrunA17_Chr4g0059951 36.735 147 90 3 1 146 367 511 4.48e-22 91.3
Msa1129370 MtrunA17_Chr3g0100561 37.931 145 75 1 1 145 41 170 5.90e-22 86.3
Msa1129370 MtrunA17_Chr7g0256171 40.000 140 82 1 11 148 4 143 7.34e-22 85.5
Msa1129370 MtrunA17_Chr1g0157131 35.135 148 90 3 1 146 368 511 8.44e-22 90.5
Msa1129370 MtrunA17_Chr7g0242561 34.932 146 94 1 1 146 350 494 1.13e-21 90.1
Msa1129370 MtrunA17_Chr8g0351681 36.242 149 87 3 6 146 43 191 1.49e-21 85.9
Msa1129370 MtrunA17_Chr7g0267751 37.324 142 86 2 5 146 433 571 1.72e-21 89.7
Msa1129370 MtrunA17_Chr3g0131181 37.324 142 86 2 5 146 327 465 2.02e-21 89.4
Msa1129370 MtrunA17_Chr3g0100471 53.333 75 35 0 1 75 41 115 6.59e-21 82.0
Msa1129370 MtrunA17_Chr1g0176751 35.616 146 91 2 1 146 418 560 6.75e-21 87.8
Msa1129370 MtrunA17_Chr8g0385341 36.620 142 87 2 5 146 328 466 7.76e-21 87.4
Msa1129370 MtrunA17_Chr5g0448721 37.838 148 85 4 1 146 390 532 8.53e-21 87.4
Msa1129370 MtrunA17_Chr2g0329371 40.972 144 71 3 12 146 64 202 1.24e-20 84.0
Msa1129370 MtrunA17_Chr7g0245911 34.194 155 93 3 1 146 36 190 1.88e-20 83.2
Msa1129370 MtrunA17_Chr4g0033371 35.616 146 92 2 1 146 366 509 4.52e-20 85.5
Msa1129370 MtrunA17_Chr1g0170281 34.932 146 92 2 1 146 412 554 5.71e-20 85.1
Msa1129370 MtrunA17_Chr1g0169621 32.075 159 81 2 17 148 9 167 8.44e-20 80.5
Msa1129370 MtrunA17_Chr3g0116141 32.836 134 89 1 13 146 6 138 8.91e-20 79.7
Msa1129370 MtrunA17_Chr3g0116151 32.836 134 89 1 13 146 7 139 9.43e-20 79.7
Msa1129370 MtrunA17_Chr3g0111371 35.556 135 83 1 12 146 5 135 1.14e-19 79.3
Msa1129370 MtrunA17_Chr3g0111371 43.333 60 34 0 83 142 3 62 5.46e-11 57.0
Msa1129370 MtrunA17_Chr4g0057661 33.813 139 83 2 12 146 6 139 3.42e-19 78.2
Msa1129370 MtrunA17_Chr7g0257751 33.108 148 98 1 1 148 352 498 5.46e-19 82.4
Msa1129370 MtrunA17_Chr5g0397101 35.811 148 89 3 1 146 360 503 6.06e-19 82.0
Msa1129370 MtrunA17_Chr4g0057641 34.532 139 82 2 12 146 6 139 8.08e-19 77.4
Msa1129370 MtrunA17_Chr4g0044961 32.867 143 94 1 4 146 49 189 8.16e-19 78.6
Msa1129370 MtrunA17_Chr4g0057651 33.813 139 83 2 12 146 6 139 2.69e-18 75.9
Msa1129370 MtrunA17_Chr7g0225921 30.496 141 96 2 8 147 2 141 5.24e-18 75.5
Msa1129370 MtrunA17_Chr5g0444171 33.333 147 94 3 1 146 386 529 6.61e-18 79.3
Msa1129370 MtrunA17_Chr8g0387671 34.459 148 91 3 1 146 360 503 7.04e-18 79.3
Msa1129370 MtrunA17_Chr4g0074811 32.653 147 95 3 1 146 385 528 7.21e-18 79.3
Msa1129370 MtrunA17_Chr4g0064231 37.255 153 78 3 12 146 64 216 3.22e-17 75.1
Msa1129370 MtrunA17_Chr1g0173541 29.730 148 103 1 1 148 346 492 6.76e-17 76.3
Msa1129370 MtrunA17_Chr6g0459231 27.857 140 100 1 8 147 4 142 9.53e-17 72.0
Msa1129370 MtrunA17_Chr3g0100461 53.704 54 25 0 93 146 53 106 5.82e-16 69.3
Msa1129370 MtrunA17_Chr3g0098951 31.169 154 95 3 1 146 377 527 6.78e-16 73.6
Msa1129370 MtrunA17_Chr0c02g0489761 31.507 146 98 2 1 146 372 515 8.53e-16 73.2
Msa1129370 MtrunA17_Chr5g0409441 29.104 134 95 0 9 142 19 152 9.84e-16 69.7
Msa1129370 MtrunA17_Chr7g0245371 32.394 142 84 2 17 146 29 170 2.77e-15 68.9
Msa1129370 MtrunA17_Chr5g0441691 32.192 146 97 2 1 146 362 505 2.87e-15 71.6
Msa1129370 MtrunA17_Chr1g0176421 28.090 178 93 3 1 146 455 629 9.12e-15 70.5
Msa1129370 MtrunA17_Chr4g0074791 31.973 147 85 5 1 146 390 522 9.44e-15 70.1
Msa1129370 MtrunA17_Chr8g0373691 30.827 133 90 2 15 146 56 187 2.52e-14 66.6
Msa1129370 MtrunA17_Chr8g0373691 42.254 71 41 0 76 146 44 114 3.82e-13 63.5
Msa1129370 MtrunA17_Chr3g0100501 30.075 133 74 3 13 144 17 131 8.78e-14 64.3
Msa1129370 MtrunA17_Chr5g0405421 30.128 156 89 5 1 146 395 540 1.14e-13 67.0
Msa1129370 MtrunA17_Chr5g0396261 30.631 111 75 1 37 145 2 112 2.50e-13 62.4
Msa1129370 MtrunA17_Chr4g0068501 27.338 139 97 2 12 146 16 154 2.55e-13 63.5
Msa1129370 MtrunA17_Chr4g0042491 40.541 74 44 0 73 146 102 175 1.15e-12 62.4
Msa1129370 MtrunA17_Chr3g0121191 29.771 131 82 1 17 147 98 218 1.45e-12 62.8
Msa1129370 MtrunA17_Chr3g0125311 30.822 146 83 4 17 147 18 160 3.25e-12 60.8
Msa1129370 MtrunA17_Chr1g0160151 29.078 141 84 2 17 147 27 161 5.06e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129370 AT4G14640.1 66.897 145 48 0 5 149 6 150 9.85e-68 202
Msa1129370 AT1G66410.1 64.189 148 53 0 1 148 1 148 4.14e-67 201
Msa1129370 AT5G37780.1 64.189 148 53 0 1 148 1 148 4.14e-67 201
Msa1129370 AT3G56800.1 64.189 148 53 0 1 148 1 148 4.62e-67 200
Msa1129370 AT2G41110.1 64.189 148 53 0 1 148 1 148 4.62e-67 200
Msa1129370 AT2G27030.1 64.189 148 53 0 1 148 1 148 4.62e-67 200
Msa1129370 AT2G27030.3 64.189 148 53 0 1 148 1 148 8.43e-67 201
Msa1129370 AT3G43810.1 63.514 148 54 0 1 148 1 148 1.59e-66 199
Msa1129370 AT3G43810.2 63.514 148 54 0 1 148 1 148 4.05e-66 200
Msa1129370 AT3G22930.1 67.832 143 46 0 5 147 28 170 4.56e-66 199
Msa1129370 AT5G21274.1 62.838 148 55 0 1 148 1 148 4.76e-66 198
Msa1129370 AT2G41110.2 59.375 160 53 1 1 148 1 160 2.60e-63 191
Msa1129370 AT5G37780.2 58.282 163 53 1 1 148 1 163 1.06e-62 190
Msa1129370 AT5G37780.3 54.598 174 53 1 1 148 1 174 6.10e-61 186
Msa1129370 AT1G66410.2 60.127 158 53 1 1 148 1 158 5.06e-60 183
Msa1129370 AT4G14640.2 67.742 124 40 0 26 149 9 132 4.56e-59 179
Msa1129370 AT5G37780.4 63.415 123 45 0 26 148 13 135 1.85e-55 171
Msa1129370 AT1G66410.4 62.500 112 42 0 37 148 1 112 7.48e-49 153
Msa1129370 AT1G66410.3 62.500 112 42 0 37 148 1 112 7.48e-49 153
Msa1129370 AT3G43810.4 62.500 112 42 0 37 148 1 112 8.62e-49 153
Msa1129370 AT3G43810.3 62.500 112 42 0 37 148 1 112 8.62e-49 153
Msa1129370 AT4G14640.3 68.932 103 32 0 5 107 6 108 4.81e-47 149
Msa1129370 AT3G22930.2 67.647 102 33 0 5 106 28 129 2.01e-44 142
Msa1129370 AT3G22930.2 43.548 62 35 0 85 146 35 96 2.28e-12 60.8
Msa1129370 AT3G51920.1 48.322 149 77 0 1 149 1 149 7.60e-43 139
Msa1129370 AT2G41090.1 47.297 148 75 1 1 148 1 145 8.04e-40 132
Msa1129370 AT2G41100.7 45.455 165 73 1 1 148 55 219 5.78e-39 133
Msa1129370 AT2G41100.7 42.063 126 57 2 37 146 2 127 1.66e-25 98.6
Msa1129370 AT2G41100.7 45.833 96 48 2 1 95 144 236 1.57e-17 77.4
Msa1129370 AT2G41100.6 45.455 165 73 1 1 148 55 219 5.78e-39 133
Msa1129370 AT2G41100.6 42.063 126 57 2 37 146 2 127 1.66e-25 98.6
Msa1129370 AT2G41100.6 45.833 96 48 2 1 95 144 236 1.57e-17 77.4
Msa1129370 AT2G41100.3 45.455 165 73 1 1 148 55 219 5.78e-39 133
Msa1129370 AT2G41100.3 42.063 126 57 2 37 146 2 127 1.66e-25 98.6
Msa1129370 AT2G41100.3 45.833 96 48 2 1 95 144 236 1.57e-17 77.4
Msa1129370 AT2G41100.4 45.455 165 73 1 1 148 90 254 1.45e-38 133
Msa1129370 AT2G41100.4 44.444 162 74 2 1 146 1 162 1.93e-38 133
Msa1129370 AT2G41100.4 45.833 96 48 2 1 95 179 271 2.47e-17 77.4
Msa1129370 AT2G41100.1 45.455 165 73 1 1 148 90 254 1.45e-38 133
Msa1129370 AT2G41100.1 44.444 162 74 2 1 146 1 162 1.93e-38 133
Msa1129370 AT2G41100.1 45.833 96 48 2 1 95 179 271 2.47e-17 77.4
Msa1129370 AT1G32250.1 36.184 152 91 1 1 146 5 156 1.05e-29 106
Msa1129370 AT3G50360.1 41.481 135 79 0 12 146 27 161 4.51e-29 104
Msa1129370 AT3G50360.1 39.130 69 42 0 80 148 22 90 4.81e-11 58.2
Msa1129370 AT1G12310.1 35.616 146 92 1 3 148 4 147 2.36e-28 102
Msa1129370 AT1G66400.1 40.000 135 79 1 15 147 18 152 2.85e-28 102
Msa1129370 AT1G62820.1 35.616 146 92 1 3 148 4 147 3.45e-28 102
Msa1129370 AT2G41100.2 44.882 127 53 1 39 148 3 129 4.06e-28 103
Msa1129370 AT2G41100.2 45.833 96 48 2 1 95 54 146 2.91e-18 77.8
Msa1129370 AT3G03000.1 39.041 146 88 1 5 149 13 158 2.66e-27 100
Msa1129370 AT4G37010.1 37.778 135 84 0 12 146 27 161 8.54e-27 99.0
Msa1129370 AT4G37010.2 37.778 135 84 0 12 146 31 165 1.02e-26 99.0
Msa1129370 AT1G18530.1 34.507 142 91 1 7 146 2 143 3.51e-26 97.1
Msa1129370 AT3G10190.1 41.606 137 77 3 12 146 70 205 2.39e-25 96.3
Msa1129370 AT3G25600.1 33.333 141 92 1 8 146 8 148 9.94e-25 93.6
Msa1129370 AT1G18210.2 37.778 135 80 1 12 146 23 153 5.33e-24 92.0
Msa1129370 AT1G18210.1 37.778 135 80 1 12 146 23 153 5.33e-24 92.0
Msa1129370 AT5G37770.1 36.765 136 82 1 15 146 20 155 5.76e-24 91.7
Msa1129370 AT5G37770.2 36.765 136 82 1 15 146 20 155 5.76e-24 91.7
Msa1129370 AT5G04870.1 37.671 146 88 2 1 146 444 586 8.93e-24 96.7
Msa1129370 AT2G41410.1 38.298 141 84 3 12 149 70 210 1.15e-23 92.0
Msa1129370 AT5G23580.1 40.141 142 82 2 5 146 320 458 3.06e-23 94.7
Msa1129370 AT2G15680.1 35.000 140 89 1 7 146 45 182 4.64e-23 90.1
Msa1129370 AT3G10660.2 36.986 146 89 2 1 146 480 622 5.42e-23 94.4
Msa1129370 AT3G10660.1 36.986 146 89 2 1 146 480 622 5.42e-23 94.4
Msa1129370 AT1G35670.1 38.732 142 84 2 5 146 324 462 1.00e-22 93.2
Msa1129370 AT5G17470.1 38.060 134 81 1 15 146 5 138 1.97e-22 87.0
Msa1129370 AT1G73630.1 36.296 135 82 1 12 146 20 150 3.24e-22 87.0
Msa1129370 AT1G24620.1 38.060 134 82 1 14 146 38 171 5.10e-22 87.0
Msa1129370 AT4G09570.1 38.028 142 85 2 5 146 323 461 7.04e-22 90.9
Msa1129370 AT2G36180.1 42.222 135 75 2 15 146 3 137 7.06e-22 85.9
Msa1129370 AT3G50770.1 38.571 140 81 2 12 146 64 203 8.59e-22 87.0
Msa1129370 AT1G05990.1 40.580 138 79 2 12 146 5 142 8.94e-22 85.5
Msa1129370 AT4G38230.1 37.671 146 88 2 1 146 174 316 2.26e-21 88.6
Msa1129370 AT4G38230.4 37.671 146 88 2 1 146 318 460 4.31e-21 88.6
Msa1129370 AT4G38230.3 37.671 146 88 2 1 146 318 460 4.31e-21 88.6
Msa1129370 AT4G38230.2 37.671 146 88 2 1 146 348 490 4.71e-21 88.6
Msa1129370 AT2G43290.1 35.915 142 84 2 12 146 65 206 5.89e-21 85.1
Msa1129370 AT2G17290.1 37.671 146 88 2 1 146 379 521 8.44e-21 87.8
Msa1129370 AT2G17290.2 37.671 146 88 2 1 146 379 521 8.44e-21 87.8
Msa1129370 AT4G03290.1 37.857 140 82 2 12 146 5 144 2.35e-20 82.0
Msa1129370 AT2G41100.5 45.263 95 49 1 1 95 1 92 6.03e-20 80.9
Msa1129370 AT2G41100.5 44.737 76 41 1 73 148 1 75 4.05e-16 70.9
Msa1129370 AT1G76040.1 33.562 146 95 2 1 146 167 310 7.01e-20 84.3
Msa1129370 AT1G76040.4 33.562 146 95 2 1 146 167 310 7.01e-20 84.3
Msa1129370 AT4G12860.1 38.406 138 83 1 11 146 4 141 9.14e-20 80.5
Msa1129370 AT2G38910.1 34.932 146 92 2 1 146 428 570 1.24e-19 84.7
Msa1129370 AT1G76040.2 33.562 146 95 2 1 146 405 548 1.63e-19 84.3
Msa1129370 AT3G07490.1 36.496 137 85 1 12 146 5 141 2.23e-19 79.3
Msa1129370 AT3G59440.1 37.594 133 80 2 16 146 55 186 2.42e-19 80.5
Msa1129370 AT4G35310.2 34.932 146 92 2 1 146 391 533 3.20e-19 83.6
Msa1129370 AT4G35310.1 34.932 146 92 2 1 146 391 533 3.20e-19 83.6
Msa1129370 AT4G04700.1 37.063 143 86 3 5 146 329 468 8.30e-19 82.0
Msa1129370 AT3G51850.1 32.192 146 98 1 1 146 348 492 9.21e-19 82.0
Msa1129370 AT4G21940.1 34.694 147 92 3 1 146 395 538 1.42e-18 81.6
Msa1129370 AT4G21940.2 34.694 147 92 3 1 146 395 538 1.48e-18 81.6
Msa1129370 AT5G12480.2 32.886 149 98 2 1 148 259 406 1.73e-18 81.3
Msa1129370 AT5G12480.1 32.886 149 98 2 1 148 353 500 1.99e-18 81.3
Msa1129370 AT3G03400.1 34.400 125 80 1 17 139 10 134 2.56e-18 76.3
Msa1129370 AT4G04695.1 34.965 143 89 3 5 146 329 468 3.05e-18 80.5
Msa1129370 AT4G04720.2 34.014 147 93 3 1 146 373 516 3.95e-18 80.1
Msa1129370 AT4G04720.1 34.014 147 93 3 1 146 373 516 3.95e-18 80.1
Msa1129370 AT3G57530.1 32.653 147 95 3 1 146 357 500 6.50e-18 79.7
Msa1129370 AT1G74740.1 36.090 133 82 3 17 148 369 499 6.96e-18 79.7
Msa1129370 AT3G20410.2 34.532 139 89 2 8 146 392 528 2.52e-17 78.2
Msa1129370 AT3G20410.1 34.532 139 89 2 8 146 392 528 2.52e-17 78.2
Msa1129370 AT5G19360.1 34.247 146 94 2 1 146 362 505 2.70e-17 77.8
Msa1129370 AT1G61950.1 31.944 144 92 3 5 146 397 536 3.29e-17 77.8
Msa1129370 AT1G18890.1 38.346 133 79 3 17 148 373 503 3.51e-17 77.4
Msa1129370 AT2G41860.2 33.108 148 94 2 1 146 348 492 3.59e-17 77.4
Msa1129370 AT2G41860.1 33.108 148 94 2 1 146 348 492 3.69e-17 77.4
Msa1129370 AT5G19450.2 31.544 149 100 2 1 148 351 498 6.35e-17 77.0
Msa1129370 AT5G19450.1 31.544 149 100 2 1 148 351 498 6.35e-17 77.0
Msa1129370 AT4G04740.4 33.566 143 91 3 5 146 366 505 7.02e-17 76.6
Msa1129370 AT4G04740.6 33.566 143 91 3 5 146 366 505 7.02e-17 76.6
Msa1129370 AT4G04740.5 33.566 143 91 3 5 146 366 505 7.02e-17 76.6
Msa1129370 AT4G04740.3 33.566 143 91 3 5 146 366 505 7.02e-17 76.6
Msa1129370 AT4G04740.1 33.566 143 91 3 5 146 366 505 7.02e-17 76.6
Msa1129370 AT4G04740.7 33.566 143 91 3 5 146 366 505 7.02e-17 76.6
Msa1129370 AT1G50700.1 33.813 139 90 2 8 146 374 510 9.12e-17 76.3
Msa1129370 AT5G12180.1 34.247 146 94 2 1 146 367 510 1.02e-16 76.3
Msa1129370 AT4G23650.1 32.432 148 94 3 1 146 372 515 2.14e-16 75.5
Msa1129370 AT4G23650.1 40.000 85 45 2 65 143 357 441 1.75e-11 61.2
Msa1129370 AT1G76640.1 33.088 136 88 2 14 146 23 158 4.80e-16 70.9
Msa1129370 AT5G44460.1 35.811 148 79 5 16 149 32 177 8.77e-16 70.9
Msa1129370 AT1G76650.1 35.821 134 84 2 14 146 44 176 9.82e-16 70.5
Msa1129370 AT1G76650.3 35.821 134 84 2 14 146 44 176 9.82e-16 70.5
Msa1129370 AT2G31500.1 30.201 149 100 3 1 146 360 507 1.51e-15 72.8
Msa1129370 AT4G20780.1 34.416 154 79 3 17 149 34 186 2.14e-15 70.1
Msa1129370 AT5G42380.1 31.655 139 94 1 9 146 46 184 6.36e-15 68.6
Msa1129370 AT2G17890.1 29.530 149 91 5 5 146 408 549 2.60e-14 69.3
Msa1129370 AT5G66210.1 28.947 152 96 4 1 146 358 503 2.65e-14 69.3
Msa1129370 AT5G66210.2 28.947 152 96 4 1 146 358 503 2.65e-14 69.3
Msa1129370 AT3G51850.2 33.636 110 72 1 1 110 348 456 2.87e-14 69.3
Msa1129370 AT3G03410.1 28.788 132 85 1 17 148 7 129 3.99e-14 65.5
Msa1129370 AT4G04710.2 31.293 147 97 3 1 146 326 469 6.64e-14 68.2
Msa1129370 AT4G04710.3 31.293 147 97 3 1 146 312 455 6.97e-14 68.2
Msa1129370 AT4G04710.1 31.293 147 97 3 1 146 339 482 8.34e-14 67.8
Msa1129370 AT1G76650.2 35.075 134 75 4 14 146 44 166 1.26e-13 64.7
Msa1129370 AT1G21550.1 32.624 141 87 3 17 149 15 155 5.73e-13 62.8
Msa1129370 AT4G04710.4 31.544 149 96 4 1 146 339 484 1.12e-12 64.7
Msa1129370 AT4G04740.2 34.545 110 71 1 5 114 366 474 1.35e-12 64.3
Msa1129370 AT1G50700.2 29.091 165 89 3 8 146 374 536 2.32e-12 63.9
Msa1129370 AT1G76040.3 33.663 101 66 1 1 101 405 504 1.94e-11 61.2
Msa1129370 AT5G66210.5 31.304 115 73 3 1 109 358 472 4.68e-11 60.1
Msa1129370 AT5G49480.1 29.134 127 84 2 12 132 18 144 6.61e-11 57.4

Find 41 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGCAGATTGGTGAGTTTC+TGG 0.177205 7_3:-81357853 Msa1129370:CDS
TGAAGCAGAAGAGGAATTTA+AGG 0.223314 7_3:-81356554 Msa1129370:CDS
CAAGAATTCCCGGAATTCTA+TGG 0.299324 7_3:+81357581 None:intergenic
AGGAATTTAAGGAAGCTTTC+AGG 0.305931 7_3:-81356543 Msa1129370:CDS
AATAGATGTCAGCTAAATAA+TGG 0.356859 7_3:-81356158 Msa1129370:three_prime_UTR
GAAACGGAACCATAGAATTC+CGG 0.373244 7_3:-81357590 Msa1129370:CDS
GTGAGAGTCAATAAAAGATA+TGG 0.378366 7_3:+81356189 None:intergenic
AATGATGAAAACGGCTGATC+TGG 0.388087 7_3:-81356338 Msa1129370:CDS
TGCATAACCATTGAAGAATT+AGG 0.421555 7_3:-81357690 Msa1129370:CDS
AAACGGAACCATAGAATTCC+GGG 0.423717 7_3:-81357589 Msa1129370:CDS
GGAATTTAAGGAAGCTTTCA+GGG 0.435182 7_3:-81356542 Msa1129370:CDS
ACTCTGGTAATAAAATTCAT+AGG 0.437140 7_3:+81356094 None:intergenic
TGCAGTGCCTAATTCTTCAA+TGG 0.437914 7_3:+81357683 None:intergenic
AAAGGTGACAGACGAAGAAC+TGG 0.439478 7_3:-81356365 Msa1129370:CDS
TTGATTATCAAGAGTTCGTC+AGG 0.441512 7_3:-81356300 Msa1129370:CDS
CCATGAGATTCAAGAATTCC+CGG 0.442127 7_3:+81357571 None:intergenic
CAATTCAATTATACCTCACT+TGG 0.458715 7_3:+81356487 None:intergenic
CCGGGAATTCTTGAATCTCA+TGG 0.483560 7_3:-81357571 Msa1129370:CDS
AAAGGAAAGTGAAGCAGAAG+AGG 0.484918 7_3:-81356563 Msa1129370:intron
CACCAATCTGCTCTTCCCTC+AGG 0.486518 7_3:+81357862 None:intergenic
ATTGAGTACCATCGGAGAAA+AGG 0.501983 7_3:-81356383 Msa1129370:CDS
CATATTATTTATGCAAACTC+TGG 0.503465 7_3:+81356078 None:intergenic
TTCCCTCAGGAAGTCGCTCA+TGG 0.516828 7_3:+81357875 None:intergenic
TCTCATGGCAAGAAAACTAA+AGG 0.521386 7_3:-81357556 Msa1129370:intron
TATGATGAATGAAGTAGATA+CGG 0.527589 7_3:-81357616 Msa1129370:CDS
GAAGTAGATACGGACAGAAA+CGG 0.529180 7_3:-81357606 Msa1129370:CDS
ACTGGAGCAAATGATGAAAA+CGG 0.534724 7_3:-81356347 Msa1129370:CDS
ATCTTTGTCAAGAAGAGAGA+AGG 0.545042 7_3:+81357827 None:intergenic
CTTCTTGACAAAGATAGAGA+TGG 0.572474 7_3:-81357819 Msa1129370:intron
CACCATGAGCGACTTCCTGA+GGG 0.578735 7_3:-81357877 None:intergenic
ATTTGCAACTCCTCCAACGT+AGG 0.588877 7_3:+81357639 None:intergenic
TTCCTGAGGGAAGAGCAGAT+TGG 0.589731 7_3:-81357864 Msa1129370:CDS
GTGTTCGACAAAGATAAAGA+TGG 0.599515 7_3:-81356520 Msa1129370:CDS
CCACCATGAGCGACTTCCTG+AGG 0.599608 7_3:-81357878 None:intergenic
AGAGTTCGTCAGGATGATGT+TGG 0.606190 7_3:-81356290 Msa1129370:CDS
AGGTCAGTATTGAGTACCAT+CGG 0.612168 7_3:-81356391 Msa1129370:CDS
ACGGCTGATCTGGATGGTGA+CGG 0.620746 7_3:-81356328 Msa1129370:CDS
ATTAGATGAAAATCCTACGT+TGG 0.627061 7_3:-81357652 Msa1129370:CDS
AGATGAAAATCCTACGTTGG+AGG 0.632700 7_3:-81357649 Msa1129370:CDS
TGGTTACATATCACCAAGTG+AGG 0.641308 7_3:-81356500 Msa1129370:intron
ATGAAAACGGCTGATCTGGA+TGG 0.649640 7_3:-81356334 Msa1129370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCAAAAAATAATAATCA+TGG + chr7_3:81356940-81356959 None:intergenic 10.0%
!!! ATTTTATTAATTGTGAATAA+AGG - chr7_3:81357380-81357399 Msa1129370:intron 10.0%
!!! TCTCATTTTTATTTATTTTT+GGG - chr7_3:81357717-81357736 Msa1129370:intron 10.0%
!! TATTCAAAAAATAATAATCA+TGG + chr7_3:81356940-81356959 None:intergenic 10.0%
!!! ATTTTATTAATTGTGAATAA+AGG - chr7_3:81357380-81357399 Msa1129370:intron 10.0%
!!! TCTCATTTTTATTTATTTTT+GGG - chr7_3:81357717-81357736 Msa1129370:intron 10.0%
!!! CTCTCATTTTTATTTATTTT+TGG - chr7_3:81357716-81357735 Msa1129370:intron 15.0%
!!! CTCTCATTTTTATTTATTTT+TGG - chr7_3:81357716-81357735 Msa1129370:intron 15.0%
!! AAGGGTTATAATATAAATGT+AGG + chr7_3:81356181-81356200 None:intergenic 20.0%
!! TTAAGAAAAAAAAGTTAAGC+TGG + chr7_3:81356222-81356241 None:intergenic 20.0%
!!! TTAATAGGTTGAGATTTAAT+TGG - chr7_3:81356486-81356505 Msa1129370:intron 20.0%
!! ATAATTATACGAACGAATAT+TGG + chr7_3:81356597-81356616 None:intergenic 20.0%
!! AAATGAGGTGAAAAATATAT+GGG + chr7_3:81356680-81356699 None:intergenic 20.0%
!! TAAATGAGGTGAAAAATATA+TGG + chr7_3:81356681-81356700 None:intergenic 20.0%
!! TTATTAGATCATCATAAATG+AGG + chr7_3:81356695-81356714 None:intergenic 20.0%
!! GATGATCTAATAAACATTTA+TGG - chr7_3:81356702-81356721 Msa1129370:intron 20.0%
!! AAGAAAACTAGAAAAGTTTA+AGG + chr7_3:81356746-81356765 None:intergenic 20.0%
!!! AATTTAAGATCATCAATGAT+AGG + chr7_3:81357081-81357100 None:intergenic 20.0%
!! ACAATGTAACAAAAAAATAG+TGG - chr7_3:81357124-81357143 Msa1129370:intron 20.0%
!! TCATCTATTTATATGCTAAA+AGG - chr7_3:81357316-81357335 Msa1129370:intron 20.0%
!! AAGGGTTATAATATAAATGT+AGG + chr7_3:81356181-81356200 None:intergenic 20.0%
!! TTAAGAAAAAAAAGTTAAGC+TGG + chr7_3:81356222-81356241 None:intergenic 20.0%
!!! TTAATAGGTTGAGATTTAAT+TGG - chr7_3:81356486-81356505 Msa1129370:intron 20.0%
!! ATAATTATACGAACGAATAT+TGG + chr7_3:81356597-81356616 None:intergenic 20.0%
!! AAATGAGGTGAAAAATATAT+GGG + chr7_3:81356680-81356699 None:intergenic 20.0%
!! TAAATGAGGTGAAAAATATA+TGG + chr7_3:81356681-81356700 None:intergenic 20.0%
!! TTATTAGATCATCATAAATG+AGG + chr7_3:81356695-81356714 None:intergenic 20.0%
!! GATGATCTAATAAACATTTA+TGG - chr7_3:81356702-81356721 Msa1129370:intron 20.0%
!! AAGAAAACTAGAAAAGTTTA+AGG + chr7_3:81356746-81356765 None:intergenic 20.0%
!!! AATTTAAGATCATCAATGAT+AGG + chr7_3:81357081-81357100 None:intergenic 20.0%
!! ACAATGTAACAAAAAAATAG+TGG - chr7_3:81357124-81357143 Msa1129370:intron 20.0%
!! TCATCTATTTATATGCTAAA+AGG - chr7_3:81357316-81357335 Msa1129370:intron 20.0%
! CAAATTACACAAAGAAAGAA+GGG + chr7_3:81356199-81356218 None:intergenic 25.0%
! TATGATGAATGAAGTAGATA+CGG - chr7_3:81356345-81356364 Msa1129370:CDS 25.0%
! TATTAAAATAAATGCAGTGG+AGG + chr7_3:81356472-81356491 None:intergenic 25.0%
!!! TCCACTGCATTTATTTTAAT+AGG - chr7_3:81356471-81356490 Msa1129370:intron 25.0%
! ACCTATTAAAATAAATGCAG+TGG + chr7_3:81356475-81356494 None:intergenic 25.0%
! GTTCGTATAATTATGTATTC+CGG - chr7_3:81356603-81356622 Msa1129370:intron 25.0%
! ACATCAAAATACATAAGTTG+CGG - chr7_3:81356855-81356874 Msa1129370:intron 25.0%
!! AGACATATAAGTTGAATGTA+AGG - chr7_3:81356888-81356907 Msa1129370:intron 25.0%
!!! GCTAAAAGGACATTTAATTT+TGG - chr7_3:81357330-81357349 Msa1129370:intron 25.0%
! AATAGATGTCAGCTAAATAA+TGG - chr7_3:81357803-81357822 Msa1129370:intron 25.0%
! ACTCTGGTAATAAAATTCAT+AGG + chr7_3:81357870-81357889 None:intergenic 25.0%
! CAAATTACACAAAGAAAGAA+GGG + chr7_3:81356199-81356218 None:intergenic 25.0%
! TATGATGAATGAAGTAGATA+CGG - chr7_3:81356345-81356364 Msa1129370:CDS 25.0%
! TATTAAAATAAATGCAGTGG+AGG + chr7_3:81356472-81356491 None:intergenic 25.0%
!!! TCCACTGCATTTATTTTAAT+AGG - chr7_3:81356471-81356490 Msa1129370:intron 25.0%
! ACCTATTAAAATAAATGCAG+TGG + chr7_3:81356475-81356494 None:intergenic 25.0%
! GTTCGTATAATTATGTATTC+CGG - chr7_3:81356603-81356622 Msa1129370:intron 25.0%
! ACATCAAAATACATAAGTTG+CGG - chr7_3:81356855-81356874 Msa1129370:intron 25.0%
!! AGACATATAAGTTGAATGTA+AGG - chr7_3:81356888-81356907 Msa1129370:intron 25.0%
!!! GCTAAAAGGACATTTAATTT+TGG - chr7_3:81357330-81357349 Msa1129370:intron 25.0%
! AATAGATGTCAGCTAAATAA+TGG - chr7_3:81357803-81357822 Msa1129370:intron 25.0%
! ACTCTGGTAATAAAATTCAT+AGG + chr7_3:81357870-81357889 None:intergenic 25.0%
GCAAATTACACAAAGAAAGA+AGG + chr7_3:81356200-81356219 None:intergenic 30.0%
TGCATAACCATTGAAGAATT+AGG - chr7_3:81356271-81356290 Msa1129370:exon 30.0%
ATTAGATGAAAATCCTACGT+TGG - chr7_3:81356309-81356328 Msa1129370:CDS 30.0%
! TAGGTTGAGATTTAATTGGA+TGG - chr7_3:81356490-81356509 Msa1129370:intron 30.0%
ACTAAATAATTCAACGTAGC+CGG + chr7_3:81356625-81356644 None:intergenic 30.0%
! CGTGATTTTCATGACAAATA+AGG + chr7_3:81356803-81356822 None:intergenic 30.0%
TGATGATCTTAAATTCGAAG+TGG - chr7_3:81357086-81357105 Msa1129370:intron 30.0%
ATAAGATGACCTAAGATCAA+AGG + chr7_3:81357258-81357277 None:intergenic 30.0%
!! AGGACATTTAATTTTGGATG+AGG - chr7_3:81357336-81357355 Msa1129370:intron 30.0%
CAATTCAATTATACCTCACT+TGG + chr7_3:81357477-81357496 None:intergenic 30.0%
GTGAGAGTCAATAAAAGATA+TGG + chr7_3:81357775-81357794 None:intergenic 30.0%
GCAAATTACACAAAGAAAGA+AGG + chr7_3:81356200-81356219 None:intergenic 30.0%
TGCATAACCATTGAAGAATT+AGG - chr7_3:81356271-81356290 Msa1129370:exon 30.0%
ATTAGATGAAAATCCTACGT+TGG - chr7_3:81356309-81356328 Msa1129370:CDS 30.0%
! TAGGTTGAGATTTAATTGGA+TGG - chr7_3:81356490-81356509 Msa1129370:intron 30.0%
ACTAAATAATTCAACGTAGC+CGG + chr7_3:81356625-81356644 None:intergenic 30.0%
! CGTGATTTTCATGACAAATA+AGG + chr7_3:81356803-81356822 None:intergenic 30.0%
TGATGATCTTAAATTCGAAG+TGG - chr7_3:81357086-81357105 Msa1129370:intron 30.0%
ATAAGATGACCTAAGATCAA+AGG + chr7_3:81357258-81357277 None:intergenic 30.0%
!! AGGACATTTAATTTTGGATG+AGG - chr7_3:81357336-81357355 Msa1129370:intron 30.0%
CAATTCAATTATACCTCACT+TGG + chr7_3:81357477-81357496 None:intergenic 30.0%
GTGAGAGTCAATAAAAGATA+TGG + chr7_3:81357775-81357794 None:intergenic 30.0%
ATCTTTGTCAAGAAGAGAGA+AGG + chr7_3:81356137-81356156 None:intergenic 35.0%
CTTCTTGACAAAGATAGAGA+TGG - chr7_3:81356142-81356161 Msa1129370:three_prime_UTR 35.0%
TCTCATGGCAAGAAAACTAA+AGG - chr7_3:81356405-81356424 Msa1129370:intron 35.0%
! ACGAGAGAAGTTCTAATCTA+GGG - chr7_3:81356515-81356534 Msa1129370:CDS 35.0%
TTTCTAAGTTCATGATGTGC+AGG + chr7_3:81356569-81356588 None:intergenic 35.0%
TGAAGCAGAAGAGGAATTTA+AGG - chr7_3:81357407-81357426 Msa1129370:intron 35.0%
AGGAATTTAAGGAAGCTTTC+AGG - chr7_3:81357418-81357437 Msa1129370:intron 35.0%
GGAATTTAAGGAAGCTTTCA+GGG - chr7_3:81357419-81357438 Msa1129370:intron 35.0%
GTGTTCGACAAAGATAAAGA+TGG - chr7_3:81357441-81357460 Msa1129370:intron 35.0%
ACTGGAGCAAATGATGAAAA+CGG - chr7_3:81357614-81357633 Msa1129370:CDS 35.0%
TTGATTATCAAGAGTTCGTC+AGG - chr7_3:81357661-81357680 Msa1129370:CDS 35.0%
ATCTTTGTCAAGAAGAGAGA+AGG + chr7_3:81356137-81356156 None:intergenic 35.0%
CTTCTTGACAAAGATAGAGA+TGG - chr7_3:81356142-81356161 Msa1129370:three_prime_UTR 35.0%
TCTCATGGCAAGAAAACTAA+AGG - chr7_3:81356405-81356424 Msa1129370:intron 35.0%
! ACGAGAGAAGTTCTAATCTA+GGG - chr7_3:81356515-81356534 Msa1129370:CDS 35.0%
TTTCTAAGTTCATGATGTGC+AGG + chr7_3:81356569-81356588 None:intergenic 35.0%
TGAAGCAGAAGAGGAATTTA+AGG - chr7_3:81357407-81357426 Msa1129370:intron 35.0%
AGGAATTTAAGGAAGCTTTC+AGG - chr7_3:81357418-81357437 Msa1129370:intron 35.0%
GGAATTTAAGGAAGCTTTCA+GGG - chr7_3:81357419-81357438 Msa1129370:intron 35.0%
GTGTTCGACAAAGATAAAGA+TGG - chr7_3:81357441-81357460 Msa1129370:intron 35.0%
ACTGGAGCAAATGATGAAAA+CGG - chr7_3:81357614-81357633 Msa1129370:CDS 35.0%
TTGATTATCAAGAGTTCGTC+AGG - chr7_3:81357661-81357680 Msa1129370:CDS 35.0%
TGCAGTGCCTAATTCTTCAA+TGG + chr7_3:81356281-81356300 None:intergenic 40.0%
AGATGAAAATCCTACGTTGG+AGG - chr7_3:81356312-81356331 Msa1129370:CDS 40.0%
GAAGTAGATACGGACAGAAA+CGG - chr7_3:81356355-81356374 Msa1129370:CDS 40.0%
GAAACGGAACCATAGAATTC+CGG - chr7_3:81356371-81356390 Msa1129370:CDS 40.0%
AAACGGAACCATAGAATTCC+GGG - chr7_3:81356372-81356391 Msa1129370:CDS 40.0%
CAAGAATTCCCGGAATTCTA+TGG + chr7_3:81356383-81356402 None:intergenic 40.0%
CCATGAGATTCAAGAATTCC+CGG + chr7_3:81356393-81356412 None:intergenic 40.0%
! CACGAGAGAAGTTCTAATCT+AGG - chr7_3:81356514-81356533 Msa1129370:CDS 40.0%
! CGAGAGAAGTTCTAATCTAG+GGG - chr7_3:81356516-81356535 Msa1129370:CDS 40.0%
AAGTCTGCACCTTTGATCTT+AGG - chr7_3:81357246-81357265 Msa1129370:intron 40.0%
AAAGGAAAGTGAAGCAGAAG+AGG - chr7_3:81357398-81357417 Msa1129370:intron 40.0%
TGGTTACATATCACCAAGTG+AGG - chr7_3:81357461-81357480 Msa1129370:intron 40.0%
ACTCAATACTGACCTCAACT+GGG + chr7_3:81357565-81357584 None:intergenic 40.0%
TACTCAATACTGACCTCAAC+TGG + chr7_3:81357566-81357585 None:intergenic 40.0%
! AGGTCAGTATTGAGTACCAT+CGG - chr7_3:81357570-81357589 Msa1129370:CDS 40.0%
ATTGAGTACCATCGGAGAAA+AGG - chr7_3:81357578-81357597 Msa1129370:CDS 40.0%
AATGATGAAAACGGCTGATC+TGG - chr7_3:81357623-81357642 Msa1129370:CDS 40.0%
TGCAGTGCCTAATTCTTCAA+TGG + chr7_3:81356281-81356300 None:intergenic 40.0%
AGATGAAAATCCTACGTTGG+AGG - chr7_3:81356312-81356331 Msa1129370:CDS 40.0%
GAAGTAGATACGGACAGAAA+CGG - chr7_3:81356355-81356374 Msa1129370:CDS 40.0%
GAAACGGAACCATAGAATTC+CGG - chr7_3:81356371-81356390 Msa1129370:CDS 40.0%
AAACGGAACCATAGAATTCC+GGG - chr7_3:81356372-81356391 Msa1129370:CDS 40.0%
CAAGAATTCCCGGAATTCTA+TGG + chr7_3:81356383-81356402 None:intergenic 40.0%
CCATGAGATTCAAGAATTCC+CGG + chr7_3:81356393-81356412 None:intergenic 40.0%
! CACGAGAGAAGTTCTAATCT+AGG - chr7_3:81356514-81356533 Msa1129370:CDS 40.0%
! CGAGAGAAGTTCTAATCTAG+GGG - chr7_3:81356516-81356535 Msa1129370:CDS 40.0%
AAGTCTGCACCTTTGATCTT+AGG - chr7_3:81357246-81357265 Msa1129370:intron 40.0%
AAAGGAAAGTGAAGCAGAAG+AGG - chr7_3:81357398-81357417 Msa1129370:intron 40.0%
TGGTTACATATCACCAAGTG+AGG - chr7_3:81357461-81357480 Msa1129370:intron 40.0%
ACTCAATACTGACCTCAACT+GGG + chr7_3:81357565-81357584 None:intergenic 40.0%
TACTCAATACTGACCTCAAC+TGG + chr7_3:81357566-81357585 None:intergenic 40.0%
! AGGTCAGTATTGAGTACCAT+CGG - chr7_3:81357570-81357589 Msa1129370:CDS 40.0%
ATTGAGTACCATCGGAGAAA+AGG - chr7_3:81357578-81357597 Msa1129370:CDS 40.0%
AATGATGAAAACGGCTGATC+TGG - chr7_3:81357623-81357642 Msa1129370:CDS 40.0%
AGAGCAGATTGGTGAGTTTC+TGG - chr7_3:81356108-81356127 Msa1129370:three_prime_UTR 45.0%
ATTTGCAACTCCTCCAACGT+AGG + chr7_3:81356325-81356344 None:intergenic 45.0%
CCGGGAATTCTTGAATCTCA+TGG - chr7_3:81356390-81356409 Msa1129370:CDS 45.0%
! GAGAAGTTCTAATCTAGGGG+CGG - chr7_3:81356519-81356538 Msa1129370:CDS 45.0%
AAAGGTGACAGACGAAGAAC+TGG - chr7_3:81357596-81357615 Msa1129370:CDS 45.0%
ATGAAAACGGCTGATCTGGA+TGG - chr7_3:81357627-81357646 Msa1129370:CDS 45.0%
AGAGTTCGTCAGGATGATGT+TGG - chr7_3:81357671-81357690 Msa1129370:CDS 45.0%
AGAGCAGATTGGTGAGTTTC+TGG - chr7_3:81356108-81356127 Msa1129370:three_prime_UTR 45.0%
ATTTGCAACTCCTCCAACGT+AGG + chr7_3:81356325-81356344 None:intergenic 45.0%
CCGGGAATTCTTGAATCTCA+TGG - chr7_3:81356390-81356409 Msa1129370:CDS 45.0%
! GAGAAGTTCTAATCTAGGGG+CGG - chr7_3:81356519-81356538 Msa1129370:CDS 45.0%
AAAGGTGACAGACGAAGAAC+TGG - chr7_3:81357596-81357615 Msa1129370:CDS 45.0%
ATGAAAACGGCTGATCTGGA+TGG - chr7_3:81357627-81357646 Msa1129370:CDS 45.0%
AGAGTTCGTCAGGATGATGT+TGG - chr7_3:81357671-81357690 Msa1129370:CDS 45.0%
!!! TTGATTATATTATATTTTAA+AGG - chr7_3:81356247-81356266 Msa1129370:three_prime_UTR 5.0%
!! GTATTATATAATTAAATTTA+CGG + chr7_3:81357219-81357238 None:intergenic 5.0%
!!! TTGATTATATTATATTTTAA+AGG - chr7_3:81356247-81356266 Msa1129370:three_prime_UTR 5.0%
!! GTATTATATAATTAAATTTA+CGG + chr7_3:81357219-81357238 None:intergenic 5.0%
TTCCTGAGGGAAGAGCAGAT+TGG - chr7_3:81356097-81356116 Msa1129370:three_prime_UTR 50.0%
TTCTAATCTAGGGGCGGATC+CGG - chr7_3:81356525-81356544 Msa1129370:CDS 50.0%
! GTCTGTCACCTTTTCTCCGA+TGG + chr7_3:81357589-81357608 None:intergenic 50.0%
TTCCTGAGGGAAGAGCAGAT+TGG - chr7_3:81356097-81356116 Msa1129370:three_prime_UTR 50.0%
TTCTAATCTAGGGGCGGATC+CGG - chr7_3:81356525-81356544 Msa1129370:CDS 50.0%
! GTCTGTCACCTTTTCTCCGA+TGG + chr7_3:81357589-81357608 None:intergenic 50.0%
CACCAATCTGCTCTTCCCTC+AGG + chr7_3:81356102-81356121 None:intergenic 55.0%
ACGGCTGATCTGGATGGTGA+CGG - chr7_3:81357633-81357652 Msa1129370:CDS 55.0%
CACCAATCTGCTCTTCCCTC+AGG + chr7_3:81356102-81356121 None:intergenic 55.0%
ACGGCTGATCTGGATGGTGA+CGG - chr7_3:81357633-81357652 Msa1129370:CDS 55.0%
GCGGATCCGGTGCTTCACAA+GGG - chr7_3:81356538-81356557 Msa1129370:CDS 60.0%
CGGATCCGGTGCTTCACAAG+GGG - chr7_3:81356539-81356558 Msa1129370:CDS 60.0%
GTGCACCCCTTGTGAAGCAC+CGG + chr7_3:81356547-81356566 None:intergenic 60.0%
TGCACGTGTGAGCCCAGTTG+AGG - chr7_3:81357550-81357569 Msa1129370:intron 60.0%
GCGGATCCGGTGCTTCACAA+GGG - chr7_3:81356538-81356557 Msa1129370:CDS 60.0%
CGGATCCGGTGCTTCACAAG+GGG - chr7_3:81356539-81356558 Msa1129370:CDS 60.0%
GTGCACCCCTTGTGAAGCAC+CGG + chr7_3:81356547-81356566 None:intergenic 60.0%
TGCACGTGTGAGCCCAGTTG+AGG - chr7_3:81357550-81357569 Msa1129370:intron 60.0%
GGCGGATCCGGTGCTTCACA+AGG - chr7_3:81356537-81356556 Msa1129370:CDS 65.0%
GGCGGATCCGGTGCTTCACA+AGG - chr7_3:81356537-81356556 Msa1129370:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 81356088 81357895 81356088 ID=Msa1129370;Name=Msa1129370
chr7_3 mRNA 81356088 81357895 81356088 ID=Msa1129370-mRNA-1;Parent=Msa1129370;Name=Msa1129370-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.33|0.25|1|1|1|4|194|149
chr7_3 exon 81356088 81356416 81356088 ID=Msa1129370-mRNA-1:exon:23608;Parent=Msa1129370-mRNA-1
chr7_3 exon 81356501 81356581 81356501 ID=Msa1129370-mRNA-1:exon:23607;Parent=Msa1129370-mRNA-1
chr7_3 exon 81357557 81357714 81357557 ID=Msa1129370-mRNA-1:exon:23606;Parent=Msa1129370-mRNA-1
chr7_3 exon 81357820 81357895 81357820 ID=Msa1129370-mRNA-1:exon:23605;Parent=Msa1129370-mRNA-1
chr7_3 CDS 81357820 81357895 81357820 ID=Msa1129370-mRNA-1:cds;Parent=Msa1129370-mRNA-1
chr7_3 CDS 81357557 81357714 81357557 ID=Msa1129370-mRNA-1:cds;Parent=Msa1129370-mRNA-1
chr7_3 CDS 81356501 81356581 81356501 ID=Msa1129370-mRNA-1:cds;Parent=Msa1129370-mRNA-1
chr7_3 CDS 81356282 81356416 81356282 ID=Msa1129370-mRNA-1:cds;Parent=Msa1129370-mRNA-1
chr7_3 three_prime_UTR 81356088 81356281 81356088 ID=Msa1129370-mRNA-1:three_prime_utr;Parent=Msa1129370-mRNA-1
Gene Sequence

>Msa1129370

ATGAGCGACTTCCTGAGGGAAGAGCAGATTGGTGAGTTTCTGGAAGCCTTCTCTCTTCTTGACAAAGATAGAGATGGCTGCATAACCATTGAAGAATTAGGCACTGCAATCAGATCATTAGATGAAAATCCTACGTTGGAGGAGTTGCAAATTATGATGAATGAAGTAGATACGGACAGAAACGGAACCATAGAATTCCGGGAATTCTTGAATCTCATGGCAAGAAAACTAAAGGAAAGTGAAGCAGAAGAGGAATTTAAGGAAGCTTTCAGGGTGTTCGACAAAGATAAAGATGGTTACATATCACCAAGTGAGTTGAGGTCAGTATTGAGTACCATCGGAGAAAAGGTGACAGACGAAGAACTGGAGCAAATGATGAAAACGGCTGATCTGGATGGTGACGGTCTCGTTGATTATCAAGAGTTCGTCAGGATGATGTTGGCTGTTTAA
Protein sequence

>Msa1129370

MSDFLREEQIGEFLEAFSLLDKDRDGCITIEELGTAIRSLDENPTLEELQIMMNEVDTDRNGTIEFREFLNLMARKLKESEAEEEFKEAFRVFDKDKDGYISPSELRSVLSTIGEKVTDEELEQMMKTADLDGDGLVDYQEFVRMMLAV*