Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131260 | VDD34524.1 | 73.188 | 414 | 68 | 6 | 10 | 415 | 2 | 380 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131260 | sp|Q9FI94|DHYS_ARATH | 71.981 | 414 | 52 | 5 | 10 | 415 | 2 | 359 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131260 | A0A396GMQ6 | 77.014 | 422 | 33 | 5 | 4 | 418 | 2 | 366 | 0.0 | 643 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1131260 | Msa1203450 | 0.911047 | 9.455274e-83 | -8.615850e-47 |
| Msa1131260 | Msa1267450 | 0.930740 | 1.054059e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131260 | MtrunA17_Chr8g0376541 | 77.014 | 422 | 33 | 5 | 4 | 418 | 2 | 366 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131260 | AT5G05920.1 | 71.981 | 414 | 52 | 5 | 10 | 415 | 2 | 359 | 0.0 | 598 |
| Msa1131260 | AT5G05920.2 | 71.918 | 292 | 26 | 3 | 124 | 415 | 6 | 241 | 1.20e-147 | 419 |
| Msa1131260 | AT5G05920.3 | 66.520 | 227 | 20 | 3 | 189 | 415 | 1 | 171 | 2.55e-98 | 291 |
Find 110 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGATTTGAAGACACTTTC+CGG | 0.186586 | 7_3:-83820960 | None:intergenic |
| ACTTCTAATCTTATCTCTTC+TGG | 0.201893 | 7_3:+83821291 | Msa1131260:CDS |
| GAATTTGATGGAAGTGATTC+TGG | 0.236275 | 7_3:+83824026 | Msa1131260:CDS |
| GAATCGAATCGGTAATTTAT+TGG | 0.240496 | 7_3:+83821778 | Msa1131260:CDS |
| GGCTACGTGTAAAGTGTTTC+TGG | 0.243992 | 7_3:+83821263 | Msa1131260:CDS |
| ATTTGCAATAATTGTCATTA+GGG | 0.270000 | 7_3:-83821802 | None:intergenic |
| GGAATCATAACTAAAATAAT+TGG | 0.276859 | 7_3:+83823840 | Msa1131260:CDS |
| TTGGCAATGCAACAGATATA+AGG | 0.280747 | 7_3:+83823859 | Msa1131260:CDS |
| GCAATGCTAACTATATTCTT+TGG | 0.283439 | 7_3:+83824486 | Msa1131260:three_prime_UTR |
| TGAAACCTCTTCATTGATAA+AGG | 0.303881 | 7_3:+83824274 | Msa1131260:exon |
| AATTTGCAATAATTGTCATT+AGG | 0.309498 | 7_3:-83821803 | None:intergenic |
| ATGAAAGCTCCTACCTTTAC+TGG | 0.310474 | 7_3:+83823393 | Msa1131260:CDS |
| ATGGGTTGAATTAGCTTGAT+TGG | 0.321932 | 7_3:+83821193 | Msa1131260:intron |
| ATCCAAGTTAATAGCTCGTT+TGG | 0.325038 | 7_3:+83823355 | Msa1131260:CDS |
| GGTTCGCTGTCAAAAGTAAA+AGG | 0.345503 | 7_3:+83824295 | Msa1131260:three_prime_UTR |
| GTTAATCCTGGACAATAAAC+TGG | 0.349470 | 7_3:-83823672 | None:intergenic |
| TCACAACTCTCAATGGCTTC+AGG | 0.353854 | 7_3:-83824433 | None:intergenic |
| CATTTGATTAACAACTTGAA+TGG | 0.354309 | 7_3:-83821071 | None:intergenic |
| ACACTTTCCGGCGAGGCTTT+CGG | 0.357612 | 7_3:-83820948 | None:intergenic |
| AATACTGCACAAGAATTTGA+TGG | 0.361085 | 7_3:+83824014 | Msa1131260:CDS |
| TGCCTTGCACCAACGTATAA+AGG | 0.362855 | 7_3:+83821713 | Msa1131260:CDS |
| TGACAATTATTGCAAATTCC+AGG | 0.364738 | 7_3:+83821808 | Msa1131260:CDS |
| ATGTACAGCTTCACCATTCA+TGG | 0.365986 | 7_3:-83823883 | None:intergenic |
| ATAATCATGCCTGTCTTCAT+AGG | 0.379415 | 7_3:-83823912 | None:intergenic |
| TGACCGTCTTGTTATTCATA+AGG | 0.387636 | 7_3:+83824364 | Msa1131260:three_prime_UTR |
| CCCCATGAAACAGCCTCATC+TGG | 0.392601 | 7_3:-83824056 | None:intergenic |
| AGGATTAACCGATGGCTCAT+TGG | 0.403351 | 7_3:+83823686 | Msa1131260:CDS |
| GTTTATCAACTATTGCTGAT+TGG | 0.403658 | 7_3:+83824605 | Msa1131260:three_prime_UTR |
| CATGTTATTGTTACAACTAC+AGG | 0.408408 | 7_3:+83821665 | Msa1131260:CDS |
| ATTAAATGTCAGTGGCAAAC+TGG | 0.410835 | 7_3:-83824339 | None:intergenic |
| GCTACGTGTAAAGTGTTTCT+GGG | 0.412284 | 7_3:+83821264 | Msa1131260:CDS |
| AAAGGAGATTTCTCTTTGCC+TGG | 0.416263 | 7_3:+83821731 | Msa1131260:CDS |
| ATCCAGATGAGGCTGTTTCA+TGG | 0.429972 | 7_3:+83824054 | Msa1131260:CDS |
| TGGCAATGCAACAGATATAA+GGG | 0.431616 | 7_3:+83823860 | Msa1131260:CDS |
| CTCAAATCCATGCTCACTAC+TGG | 0.433323 | 7_3:+83821022 | Msa1131260:CDS |
| CATTCAAGTTGTTAATCAAA+TGG | 0.437638 | 7_3:+83821072 | Msa1131260:CDS |
| ACATTAAGACCACGGTTGTC+AGG | 0.437997 | 7_3:-83823750 | None:intergenic |
| TCACTACAATCGTCAGTAAT+GGG | 0.439639 | 7_3:-83821231 | None:intergenic |
| GGATTAACCGATGGCTCATT+GGG | 0.439770 | 7_3:+83823687 | Msa1131260:CDS |
| CGATTGTAGTGATCGGAAAT+CGG | 0.442152 | 7_3:+83821242 | Msa1131260:CDS |
| AATATTCCAGTTTATTGTCC+AGG | 0.444941 | 7_3:+83823666 | Msa1131260:CDS |
| ACTATATTCTTTGGAACTGT+GGG | 0.456420 | 7_3:+83824495 | Msa1131260:three_prime_UTR |
| CTACCTTTACTGGGCATACA+AGG | 0.457425 | 7_3:+83823403 | Msa1131260:CDS |
| TTGAATGGCTTCACCGAGGT+TGG | 0.457978 | 7_3:-83821056 | None:intergenic |
| TCAAAAGTAAAAGGTGTGGC+TGG | 0.460091 | 7_3:+83824304 | Msa1131260:three_prime_UTR |
| TCCAGATGAGGCTGTTTCAT+GGG | 0.464019 | 7_3:+83824055 | Msa1131260:CDS |
| TCCAAGTTAATAGCTCGTTT+GGG | 0.467798 | 7_3:+83823356 | Msa1131260:CDS |
| CAACAATTCACAACTCTCAA+TGG | 0.471735 | 7_3:-83824440 | None:intergenic |
| GCGTTGCAAATGTGATGTTT+CGG | 0.480473 | 7_3:-83823951 | None:intergenic |
| ATTATTGCAAATTCCAGGAC+TGG | 0.481570 | 7_3:+83821813 | Msa1131260:CDS |
| AACTATATTCTTTGGAACTG+TGG | 0.483607 | 7_3:+83824494 | Msa1131260:three_prime_UTR |
| GGAGCTTATCTTCGCTCAAA+AGG | 0.483770 | 7_3:+83821752 | Msa1131260:CDS |
| ATCACTACAATCGTCAGTAA+TGG | 0.493546 | 7_3:-83821232 | None:intergenic |
| TCCCAAACGAGCTATTAACT+TGG | 0.493827 | 7_3:-83823357 | None:intergenic |
| AATAATGAATTGCTTCTGAA+TGG | 0.498479 | 7_3:-83824410 | None:intergenic |
| CCTAGGTCGAATCGAAACTT+AGG | 0.510509 | 7_3:+83820840 | None:intergenic |
| CTTCCTTTGTCAGCATCACA+TGG | 0.513831 | 7_3:+83821332 | Msa1131260:CDS |
| TTGCCTTGTATGCCCAGTAA+AGG | 0.514374 | 7_3:-83823406 | None:intergenic |
| AATGAGCCATCGGTTAATCC+TGG | 0.515125 | 7_3:-83823684 | None:intergenic |
| AGGATCTGCGAAAACTGTTA+AGG | 0.517573 | 7_3:+83824088 | Msa1131260:CDS |
| AACGATAGCATTCCCACTGC+TGG | 0.520093 | 7_3:+83824227 | Msa1131260:CDS |
| TATGTAACTGCAGGACATCA+AGG | 0.524243 | 7_3:-83823532 | None:intergenic |
| AGGTGTGGCTGGGATCTTGA+TGG | 0.529055 | 7_3:+83824315 | Msa1131260:three_prime_UTR |
| CTCCTTTATACGTTGGTGCA+AGG | 0.531084 | 7_3:-83821715 | None:intergenic |
| TCAAAAGGATTGAATCGAAT+CGG | 0.532537 | 7_3:+83821767 | Msa1131260:CDS |
| GCAGTAAAGAGTAAAATGAA+TGG | 0.534821 | 7_3:-83823796 | None:intergenic |
| AAATAGGAATAATCCAGTCC+TGG | 0.541617 | 7_3:-83821826 | None:intergenic |
| GTGAATTGTTGATATAATTG+TGG | 0.545985 | 7_3:+83824452 | Msa1131260:three_prime_UTR |
| GCGAACCTTTATCAATGAAG+AGG | 0.556685 | 7_3:-83824279 | None:intergenic |
| CATGCAGATCCTATGAAGAC+AGG | 0.558786 | 7_3:+83823903 | Msa1131260:CDS |
| TGCAAATGTGATGTTTCGGA+AGG | 0.562235 | 7_3:-83823947 | None:intergenic |
| TTTGAGCGAAGATAAGCTCC+AGG | 0.562914 | 7_3:-83821749 | None:intergenic |
| CAAAAGTAAAAGGTGTGGCT+GGG | 0.565525 | 7_3:+83824305 | Msa1131260:three_prime_UTR |
| GAGAAATCTCCTTTATACGT+TGG | 0.568029 | 7_3:-83821722 | None:intergenic |
| TTTCATTCCTTCCACAACAC+TGG | 0.571917 | 7_3:+83823723 | Msa1131260:CDS |
| AAACGAGCTATTAACTTGGA+TGG | 0.573229 | 7_3:-83823353 | None:intergenic |
| ACAGATATAAGGGCCATGAA+TGG | 0.578881 | 7_3:+83823870 | Msa1131260:CDS |
| CCAGATGAGGCTGTTTCATG+GGG | 0.578985 | 7_3:+83824056 | Msa1131260:CDS |
| CTTGTATGCCCAGTAAAGGT+AGG | 0.581698 | 7_3:-83823402 | None:intergenic |
| AATGTTTCAGCAACCAGCAG+TGG | 0.585353 | 7_3:-83824240 | None:intergenic |
| TGTCAGGACTGCCAGTGTTG+TGG | 0.586668 | 7_3:-83823734 | None:intergenic |
| GGTTGAATTAGCTTGATTGG+AGG | 0.590957 | 7_3:+83821196 | Msa1131260:intron |
| TATTGTCCAGGATTAACCGA+TGG | 0.595026 | 7_3:+83823678 | Msa1131260:CDS |
| TGACAACCGTGGTCTTAATG+TGG | 0.596650 | 7_3:+83823752 | Msa1131260:CDS |
| CGGAAAGTGTCTTCAAATCG+AGG | 0.609261 | 7_3:+83820961 | Msa1131260:CDS |
| CTTAATGTGGACATAGTGCA+AGG | 0.610797 | 7_3:+83823765 | Msa1131260:CDS |
| TGAAAGCTCCTACCTTTACT+GGG | 0.613009 | 7_3:+83823394 | Msa1131260:CDS |
| TTCTGGAGCTCATCCAGATG+AGG | 0.617682 | 7_3:+83824043 | Msa1131260:CDS |
| CGGTCAAAATTAAATGTCAG+TGG | 0.618761 | 7_3:-83824347 | None:intergenic |
| AACGCCAACATGATGCGTAA+TGG | 0.620030 | 7_3:+83823969 | Msa1131260:CDS |
| CATGTCACCCAATGAGCCAT+CGG | 0.626979 | 7_3:-83823694 | None:intergenic |
| ATGTTTCAGCAACCAGCAGT+GGG | 0.629148 | 7_3:-83824239 | None:intergenic |
| TTGAAAACCAGTAGTGAGCA+TGG | 0.634888 | 7_3:-83821029 | None:intergenic |
| TGCACCATTACGCATCATGT+TGG | 0.635711 | 7_3:-83823973 | None:intergenic |
| TTACTGACGATTGTAGTGAT+CGG | 0.636960 | 7_3:+83821235 | Msa1131260:CDS |
| GGAAAGTGTCTTCAAATCGA+GGG | 0.644614 | 7_3:+83820962 | Msa1131260:CDS |
| GTTGAAGGAACAAACTCATG+AGG | 0.655135 | 7_3:+83821859 | Msa1131260:CDS |
| TTTGAAGACACTTTCCGGCG+AGG | 0.658661 | 7_3:-83820955 | None:intergenic |
| AGGACTGCCAGTGTTGTGGA+AGG | 0.670043 | 7_3:-83823730 | None:intergenic |
| TCACCATGTGATGCTGACAA+AGG | 0.671310 | 7_3:-83821335 | None:intergenic |
| GAGGGTTATGATTTCAACCG+CGG | 0.671769 | 7_3:+83820980 | Msa1131260:CDS |
| GTTATTGTTACAACTACAGG+TGG | 0.672134 | 7_3:+83821668 | Msa1131260:CDS |
| GCTGTCAAAAGTAAAAGGTG+TGG | 0.689064 | 7_3:+83824300 | Msa1131260:three_prime_UTR |
| GGACCTTATGAATAACAAGA+CGG | 0.697207 | 7_3:-83824367 | None:intergenic |
| CTATGTCCACATTAAGACCA+CGG | 0.698384 | 7_3:-83823758 | None:intergenic |
| GTTACATACAAAATGCAACA+TGG | 0.701217 | 7_3:+83823547 | Msa1131260:CDS |
| ACTGGCAGTCCTGACAACCG+TGG | 0.720073 | 7_3:+83823741 | Msa1131260:CDS |
| GCTGTTGATAATCGACGCCG+CGG | 0.724424 | 7_3:-83820997 | None:intergenic |
| CAACTTGAATGGCTTCACCG+AGG | 0.725512 | 7_3:-83821060 | None:intergenic |
| CAGATGAGGCTGTTTCATGG+GGG | 0.740121 | 7_3:+83824057 | Msa1131260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAATTATAATTTT+GGG | + | chr7_3:83822830-83822849 | Msa1131260:intron | 0.0% |
| !! | TATTATAAATTAACATTTCA+AGG | - | chr7_3:83822143-83822162 | None:intergenic | 10.0% |
| !!! | ACATTTTTAGTTTAATATTT+TGG | + | chr7_3:83822871-83822890 | Msa1131260:intron | 10.0% |
| !!! | CATTTTTAGTTTAATATTTT+GGG | + | chr7_3:83822872-83822891 | Msa1131260:intron | 10.0% |
| !!! | ATAATCTTATTGATATTTTT+TGG | + | chr7_3:83823630-83823649 | Msa1131260:intron | 10.0% |
| !! | AATATATATGATCTAATCAA+AGG | - | chr7_3:83821516-83821535 | None:intergenic | 15.0% |
| !! | AACAATATTAAAAAACCATT+TGG | - | chr7_3:83821611-83821630 | None:intergenic | 15.0% |
| !! | TTCAACATTTGATTAAAAAT+AGG | - | chr7_3:83821845-83821864 | None:intergenic | 15.0% |
| !!! | TATTTTTAATCAAATGTTGA+AGG | + | chr7_3:83821844-83821863 | Msa1131260:CDS | 15.0% |
| !! | TAAAATCTATTTCCAATAAA+AGG | - | chr7_3:83822816-83822835 | None:intergenic | 15.0% |
| !! | ATATTATGTTTAATTACTAC+CGG | + | chr7_3:83822926-83822945 | Msa1131260:intron | 15.0% |
| !! | AAGTTAAAAAAACAAAGAGA+CGG | - | chr7_3:83821143-83821162 | None:intergenic | 20.0% |
| !! | ATTTGCAATAATTGTCATTA+GGG | - | chr7_3:83821805-83821824 | None:intergenic | 20.0% |
| !! | AATTTGCAATAATTGTCATT+AGG | - | chr7_3:83821806-83821825 | None:intergenic | 20.0% |
| !! | TACAAAAGAAAGGTTTAAAA+AGG | - | chr7_3:83822015-83822034 | None:intergenic | 20.0% |
| !!! | AAGAAAAGTTTTAACATTTG+TGG | - | chr7_3:83822108-83822127 | None:intergenic | 20.0% |
| !! | CAAAATTTATTACTGAAATC+TGG | - | chr7_3:83822725-83822744 | None:intergenic | 20.0% |
| !! | TATTCTTCATTTCTGTTAAA+GGG | - | chr7_3:83822753-83822772 | None:intergenic | 20.0% |
| !!! | GTTTAATATTTTGGGTTTAA+TGG | + | chr7_3:83822880-83822899 | Msa1131260:intron | 20.0% |
| !!! | TTATATTTTACCTCTGATTA+AGG | + | chr7_3:83823249-83823268 | Msa1131260:intron | 20.0% |
| !!! | TCTTATTTACTCAATAACTT+CGG | + | chr7_3:83823586-83823605 | Msa1131260:intron | 20.0% |
| !! | GGAATCATAACTAAAATAAT+TGG | + | chr7_3:83823840-83823859 | Msa1131260:CDS | 20.0% |
| !!! | ATAAAAGGACATAGTTTTAA+GGG | - | chr7_3:83824180-83824199 | None:intergenic | 20.0% |
| !!! | AATAAAAGGACATAGTTTTA+AGG | - | chr7_3:83824181-83824200 | None:intergenic | 20.0% |
| !!! | GTAAAAAAATGCTTTTTATG+TGG | - | chr7_3:83824391-83824410 | None:intergenic | 20.0% |
| ! | CATTTGATTAACAACTTGAA+TGG | - | chr7_3:83821074-83821093 | None:intergenic | 25.0% |
| !!! | CATTCAAGTTGTTAATCAAA+TGG | + | chr7_3:83821072-83821091 | Msa1131260:CDS | 25.0% |
| ! | AGTTAAAAAAACAAAGAGAC+GGG | - | chr7_3:83821142-83821161 | None:intergenic | 25.0% |
| !! | GCTTATAAAGTTTTTGTCTT+TGG | + | chr7_3:83821167-83821186 | Msa1131260:intron | 25.0% |
| !!! | TCATAATAACTTCTAGCTTA+TGG | - | chr7_3:83821405-83821424 | None:intergenic | 25.0% |
| ! | AAGCTAGAAGTTATTATGAA+AGG | + | chr7_3:83821406-83821425 | Msa1131260:intron | 25.0% |
| ! | TAATCAAAGGAAATTGCAAT+AGG | - | chr7_3:83821503-83821522 | None:intergenic | 25.0% |
| ! | TCATATATATTCAAAGATCC+TGG | + | chr7_3:83821525-83821544 | Msa1131260:intron | 25.0% |
| !!! | ACTACATAAGTTTTGTAATG+CGG | - | chr7_3:83821915-83821934 | None:intergenic | 25.0% |
| ! | TTTGTCAAGGTAATCTAAAT+CGG | + | chr7_3:83821941-83821960 | Msa1131260:intron | 25.0% |
| !! | CCAATAAATTCAGATTTTCA+AGG | - | chr7_3:83822045-83822064 | None:intergenic | 25.0% |
| ! | CCTTGAAAATCTGAATTTAT+TGG | + | chr7_3:83822042-83822061 | Msa1131260:intron | 25.0% |
| ! | AGATCTAATAATACATCTGT+AGG | + | chr7_3:83822271-83822290 | Msa1131260:intron | 25.0% |
| ! | TAATAATACATCTGTAGGAA+TGG | + | chr7_3:83822276-83822295 | Msa1131260:intron | 25.0% |
| ! | AGGTATTTGTATAATGTAGT+TGG | + | chr7_3:83822461-83822480 | Msa1131260:intron | 25.0% |
| ! | CTATTCTTCATTTCTGTTAA+AGG | - | chr7_3:83822754-83822773 | None:intergenic | 25.0% |
| !! | AATCATTTCGTTCCTTTTAT+TGG | + | chr7_3:83822801-83822820 | Msa1131260:intron | 25.0% |
| ! | CCAAAGTAATTAAAATCAAC+TGG | - | chr7_3:83823136-83823155 | None:intergenic | 25.0% |
| !!! | CCAGTTGATTTTAATTACTT+TGG | + | chr7_3:83823133-83823152 | Msa1131260:intron | 25.0% |
| ! | TTAGAATACATATATTCTGC+TGG | + | chr7_3:83823202-83823221 | Msa1131260:intron | 25.0% |
| !!! | ATGGATGATTTTGAAACAAT+TGG | + | chr7_3:83823819-83823838 | Msa1131260:CDS | 25.0% |
| !!! | TAGTTTTAAGGGATATAGTA+CGG | - | chr7_3:83824169-83824188 | None:intergenic | 25.0% |
| ! | AATAATGAATTGCTTCTGAA+TGG | - | chr7_3:83824413-83824432 | None:intergenic | 25.0% |
| ! | GTGAATTGTTGATATAATTG+TGG | + | chr7_3:83824452-83824471 | Msa1131260:three_prime_UTR | 25.0% |
| ! | AATGTCGTCTTCTGAAAAAA+AGG | + | chr7_3:83820871-83820890 | Msa1131260:exon | 30.0% |
| !!! | AAGTTTTTGTCTTTGGAACA+TGG | + | chr7_3:83821174-83821193 | Msa1131260:intron | 30.0% |
| !!! | AGTTTTTGTCTTTGGAACAT+GGG | + | chr7_3:83821175-83821194 | Msa1131260:intron | 30.0% |
| ACTTCTAATCTTATCTCTTC+TGG | + | chr7_3:83821291-83821310 | Msa1131260:CDS | 30.0% | |
| TGATTGATTAATTGCCAATG+AGG | - | chr7_3:83821454-83821473 | None:intergenic | 30.0% | |
| TATATATTCAAAGATCCTGG+TGG | + | chr7_3:83821528-83821547 | Msa1131260:intron | 30.0% | |
| CTTTATATATTAAAGCCACC+AGG | - | chr7_3:83821546-83821565 | None:intergenic | 30.0% | |
| !! | TGAAAACTTGCTAAACCAAA+TGG | + | chr7_3:83821593-83821612 | Msa1131260:intron | 30.0% |
| CATGTTATTGTTACAACTAC+AGG | + | chr7_3:83821665-83821684 | Msa1131260:CDS | 30.0% | |
| TCAAAAGGATTGAATCGAAT+CGG | + | chr7_3:83821767-83821786 | Msa1131260:CDS | 30.0% | |
| GAATCGAATCGGTAATTTAT+TGG | + | chr7_3:83821778-83821797 | Msa1131260:CDS | 30.0% | |
| TGACAATTATTGCAAATTCC+AGG | + | chr7_3:83821808-83821827 | Msa1131260:CDS | 30.0% | |
| !! | CTACATAAGTTTTGTAATGC+GGG | - | chr7_3:83821914-83821933 | None:intergenic | 30.0% |
| ! | ATGTAGTTCAGTTTTTGTCA+AGG | + | chr7_3:83821928-83821947 | Msa1131260:intron | 30.0% |
| CATTGTATAAAAGAGAGAAC+TGG | - | chr7_3:83822235-83822254 | None:intergenic | 30.0% | |
| !! | CTTAATAAGCATGTTTTGAG+TGG | + | chr7_3:83822332-83822351 | Msa1131260:intron | 30.0% |
| TACATTCCTACTAGTATCAT+CGG | - | chr7_3:83822391-83822410 | None:intergenic | 30.0% | |
| ATGATACTAGTAGGAATGTA+TGG | + | chr7_3:83822391-83822410 | Msa1131260:intron | 30.0% | |
| AGTTTACACCTGCTATATAT+TGG | + | chr7_3:83822524-83822543 | Msa1131260:intron | 30.0% | |
| ATTATGTTCTTGTTGAGTCA+TGG | + | chr7_3:83822571-83822590 | Msa1131260:intron | 30.0% | |
| GAGTCATGGTTTCTAATAAT+TGG | + | chr7_3:83822585-83822604 | Msa1131260:intron | 30.0% | |
| GATATTACGTTTGATTGTTC+TGG | + | chr7_3:83822612-83822631 | Msa1131260:intron | 30.0% | |
| CACAAATACATAATATCCCA+AGG | - | chr7_3:83822670-83822689 | None:intergenic | 30.0% | |
| GGGATATTATGTATTTGTGA+TGG | + | chr7_3:83822671-83822690 | Msa1131260:intron | 30.0% | |
| AAAATGCCAAAATGTTACGT+CGG | - | chr7_3:83823110-83823129 | None:intergenic | 30.0% | |
| AATATAATCTCCTTCATCAG+AGG | - | chr7_3:83823236-83823255 | None:intergenic | 30.0% | |
| ! | TATTTTACCTCTGATTAAGG+AGG | + | chr7_3:83823252-83823271 | Msa1131260:intron | 30.0% |
| AGGAAACTACAGTATAACAA+TGG | - | chr7_3:83823515-83823534 | None:intergenic | 30.0% | |
| GTTACATACAAAATGCAACA+TGG | + | chr7_3:83823547-83823566 | Msa1131260:CDS | 30.0% | |
| AATATTCCAGTTTATTGTCC+AGG | + | chr7_3:83823666-83823685 | Msa1131260:CDS | 30.0% | |
| GCAGTAAAGAGTAAAATGAA+TGG | - | chr7_3:83823799-83823818 | None:intergenic | 30.0% | |
| ! | TCATTTTACTCTTTACTGCA+TGG | + | chr7_3:83823800-83823819 | Msa1131260:CDS | 30.0% |
| ! | AAGACAGGCATGATTATTTT+AGG | + | chr7_3:83823918-83823937 | Msa1131260:CDS | 30.0% |
| AATACTGCACAAGAATTTGA+TGG | + | chr7_3:83824014-83824033 | Msa1131260:CDS | 30.0% | |
| ! | AACAAGTAGCGAAAGTATAT+AGG | - | chr7_3:83824119-83824138 | None:intergenic | 30.0% |
| TGAAACCTCTTCATTGATAA+AGG | + | chr7_3:83824274-83824293 | Msa1131260:exon | 30.0% | |
| GCAATGCTAACTATATTCTT+TGG | + | chr7_3:83824486-83824505 | Msa1131260:three_prime_UTR | 30.0% | |
| !! | AACTATATTCTTTGGAACTG+TGG | + | chr7_3:83824494-83824513 | Msa1131260:three_prime_UTR | 30.0% |
| !! | ACTATATTCTTTGGAACTGT+GGG | + | chr7_3:83824495-83824514 | Msa1131260:three_prime_UTR | 30.0% |
| !!! | TTAGTTTTGAGGTGTTGAAA+AGG | + | chr7_3:83824523-83824542 | Msa1131260:three_prime_UTR | 30.0% |
| GTTTATCAACTATTGCTGAT+TGG | + | chr7_3:83824605-83824624 | Msa1131260:three_prime_UTR | 30.0% | |
| !!! | TTCGGATTTTTTGAAGACTG+TGG | - | chr7_3:83820933-83820952 | None:intergenic | 35.0% |
| AAAAAAACAAAGAGACGGGT+TGG | - | chr7_3:83821138-83821157 | None:intergenic | 35.0% | |
| ! | ATGGGTTGAATTAGCTTGAT+TGG | + | chr7_3:83821193-83821212 | Msa1131260:intron | 35.0% |
| TCACTACAATCGTCAGTAAT+GGG | - | chr7_3:83821234-83821253 | None:intergenic | 35.0% | |
| ATCACTACAATCGTCAGTAA+TGG | - | chr7_3:83821235-83821254 | None:intergenic | 35.0% | |
| TTACTGACGATTGTAGTGAT+CGG | + | chr7_3:83821235-83821254 | Msa1131260:CDS | 35.0% | |
| GAAGTCATTGTCATTGTCTA+TGG | - | chr7_3:83821432-83821451 | None:intergenic | 35.0% | |
| AATGACAATGACTTCCTCAT+TGG | + | chr7_3:83821437-83821456 | Msa1131260:intron | 35.0% | |
| CCTGTAGAATAACATGAGTA+CGG | - | chr7_3:83821643-83821662 | None:intergenic | 35.0% | |
| GTTATTGTTACAACTACAGG+TGG | + | chr7_3:83821668-83821687 | Msa1131260:CDS | 35.0% | |
| GAGAAATCTCCTTTATACGT+TGG | - | chr7_3:83821725-83821744 | None:intergenic | 35.0% | |
| ATTATTGCAAATTCCAGGAC+TGG | + | chr7_3:83821813-83821832 | Msa1131260:CDS | 35.0% | |
| AAATAGGAATAATCCAGTCC+TGG | - | chr7_3:83821829-83821848 | None:intergenic | 35.0% | |
| TCAAGGTAATCTAAATCGGA+TGG | + | chr7_3:83821945-83821964 | Msa1131260:intron | 35.0% | |
| AGGTGAGTGATACAAAAGAA+AGG | - | chr7_3:83822025-83822044 | None:intergenic | 35.0% | |
| TAAAGTTCCACGTTGCTTAA+AGG | - | chr7_3:83822188-83822207 | None:intergenic | 35.0% | |
| TGTAGGAATGGAAATACTGA+CGG | + | chr7_3:83822288-83822307 | Msa1131260:intron | 35.0% | |
| !! | ATGTTTTGAGTGGCAATAGT+AGG | + | chr7_3:83822342-83822361 | Msa1131260:intron | 35.0% |
| TTGATTCCGATGATACTAGT+AGG | + | chr7_3:83822382-83822401 | Msa1131260:intron | 35.0% | |
| ! | AAAATGATGATGCAGAAGAG+AGG | + | chr7_3:83822441-83822460 | Msa1131260:intron | 35.0% |
| !!! | GGCATTTGTTTTGATGTAAG+TGG | + | chr7_3:83822482-83822501 | Msa1131260:intron | 35.0% |
| ! | TAAGTGGTGCATGTTTGTTA+AGG | + | chr7_3:83822498-83822517 | Msa1131260:intron | 35.0% |
| TACACCTGCTATATATTGGT+AGG | + | chr7_3:83822528-83822547 | Msa1131260:intron | 35.0% | |
| ACACCTGCTATATATTGGTA+GGG | + | chr7_3:83822529-83822548 | Msa1131260:intron | 35.0% | |
| CTGAAATCTGGATGCATATA+GGG | - | chr7_3:83822713-83822732 | None:intergenic | 35.0% | |
| ACTGAAATCTGGATGCATAT+AGG | - | chr7_3:83822714-83822733 | None:intergenic | 35.0% | |
| TCAAGGTTTAATGGTTAGAC+CGG | - | chr7_3:83822959-83822978 | None:intergenic | 35.0% | |
| TCTAACCATTAAACCTTGAC+TGG | + | chr7_3:83822960-83822979 | Msa1131260:intron | 35.0% | |
| ATTCTCCAGTCAAGGTTTAA+TGG | - | chr7_3:83822968-83822987 | None:intergenic | 35.0% | |
| AATCAAACCAGACATTGAAC+CGG | - | chr7_3:83822994-83823013 | None:intergenic | 35.0% | |
| GACGAAATGACAATAGCTAT+TGG | + | chr7_3:83823033-83823052 | Msa1131260:intron | 35.0% | |
| AAAAGAACCTCCTTAATCAG+AGG | - | chr7_3:83823262-83823281 | None:intergenic | 35.0% | |
| !!! | CATCTTCCTTTTTTGACAGA+AGG | + | chr7_3:83823319-83823338 | Msa1131260:intron | 35.0% |
| ! | AAACGAGCTATTAACTTGGA+TGG | - | chr7_3:83823356-83823375 | None:intergenic | 35.0% |
| ATCCAAGTTAATAGCTCGTT+TGG | + | chr7_3:83823355-83823374 | Msa1131260:CDS | 35.0% | |
| TCCAAGTTAATAGCTCGTTT+GGG | + | chr7_3:83823356-83823375 | Msa1131260:CDS | 35.0% | |
| ! | TGCATTTTGTATGTAACTGC+AGG | - | chr7_3:83823544-83823563 | None:intergenic | 35.0% |
| GTTAATCCTGGACAATAAAC+TGG | - | chr7_3:83823675-83823694 | None:intergenic | 35.0% | |
| TTGGCAATGCAACAGATATA+AGG | + | chr7_3:83823859-83823878 | Msa1131260:CDS | 35.0% | |
| TGGCAATGCAACAGATATAA+GGG | + | chr7_3:83823860-83823879 | Msa1131260:CDS | 35.0% | |
| ATAATCATGCCTGTCTTCAT+AGG | - | chr7_3:83823915-83823934 | None:intergenic | 35.0% | |
| !!! | ACAGGCATGATTATTTTAGG+AGG | + | chr7_3:83823921-83823940 | Msa1131260:CDS | 35.0% |
| GAATTTGATGGAAGTGATTC+TGG | + | chr7_3:83824026-83824045 | Msa1131260:CDS | 35.0% | |
| !! | TCCTTTTATTTCGCTAAACC+AGG | + | chr7_3:83824191-83824210 | Msa1131260:intron | 35.0% |
| ACCTGGTTTAGCGAAATAAA+AGG | - | chr7_3:83824195-83824214 | None:intergenic | 35.0% | |
| ATTAAATGTCAGTGGCAAAC+TGG | - | chr7_3:83824342-83824361 | None:intergenic | 35.0% | |
| CGGTCAAAATTAAATGTCAG+TGG | - | chr7_3:83824350-83824369 | None:intergenic | 35.0% | |
| !! | TGACCGTCTTGTTATTCATA+AGG | + | chr7_3:83824364-83824383 | Msa1131260:three_prime_UTR | 35.0% |
| GGACCTTATGAATAACAAGA+CGG | - | chr7_3:83824370-83824389 | None:intergenic | 35.0% | |
| CAACAATTCACAACTCTCAA+TGG | - | chr7_3:83824443-83824462 | None:intergenic | 35.0% | |
| ! | CTCGATTTGAAGACACTTTC+CGG | - | chr7_3:83820963-83820982 | None:intergenic | 40.0% |
| !! | GGAAAGTGTCTTCAAATCGA+GGG | + | chr7_3:83820962-83820981 | Msa1131260:CDS | 40.0% |
| TTGAAAACCAGTAGTGAGCA+TGG | - | chr7_3:83821032-83821051 | None:intergenic | 40.0% | |
| ! | GGTTGAATTAGCTTGATTGG+AGG | + | chr7_3:83821196-83821215 | Msa1131260:intron | 40.0% |
| CGATTGTAGTGATCGGAAAT+CGG | + | chr7_3:83821242-83821261 | Msa1131260:CDS | 40.0% | |
| ! | GCTACGTGTAAAGTGTTTCT+GGG | + | chr7_3:83821264-83821283 | Msa1131260:CDS | 40.0% |
| CCGTACTCATGTTATTCTAC+AGG | + | chr7_3:83821640-83821659 | Msa1131260:intron | 40.0% | |
| AAAGGAGATTTCTCTTTGCC+TGG | + | chr7_3:83821731-83821750 | Msa1131260:CDS | 40.0% | |
| GTTGAAGGAACAAACTCATG+AGG | + | chr7_3:83821859-83821878 | Msa1131260:CDS | 40.0% | |
| TCTAAATCGGATGGTTTGAC+TGG | + | chr7_3:83821954-83821973 | Msa1131260:intron | 40.0% | |
| CTAAATCGGATGGTTTGACT+GGG | + | chr7_3:83821955-83821974 | Msa1131260:intron | 40.0% | |
| GTTTAAAAAGGTCTGACCCT+CGG | - | chr7_3:83822003-83822022 | None:intergenic | 40.0% | |
| GTTATCTCCTTTAAGCAACG+TGG | + | chr7_3:83822178-83822197 | Msa1131260:intron | 40.0% | |
| ATGGAAATACTGACGGAGAA+AGG | + | chr7_3:83822295-83822314 | Msa1131260:intron | 40.0% | |
| AATGTATGGTGTGTAGCAGT+TGG | + | chr7_3:83822405-83822424 | Msa1131260:intron | 40.0% | |
| ATGTATGGTGTGTAGCAGTT+GGG | + | chr7_3:83822406-83822425 | Msa1131260:intron | 40.0% | |
| !! | CCATGTGATTTTAGTGCCTT+GGG | + | chr7_3:83822651-83822670 | Msa1131260:intron | 40.0% |
| !! | AATTACTACCGGTTCAACTC+CGG | + | chr7_3:83822937-83822956 | Msa1131260:intron | 40.0% |
| GAAACTCACATACACAAGTG+AGG | + | chr7_3:83823055-83823074 | Msa1131260:intron | 40.0% | |
| ACATACACAAGTGAGGAACT+GGG | + | chr7_3:83823062-83823081 | Msa1131260:intron | 40.0% | |
| !!! | CTTTGGTTTTTGTCAATGCC+TGG | + | chr7_3:83823150-83823169 | Msa1131260:intron | 40.0% |
| GGATAAAGAACCTCTGATGA+AGG | + | chr7_3:83823223-83823242 | Msa1131260:intron | 40.0% | |
| ACTGCACCTTCTGTCAAAAA+AGG | - | chr7_3:83823328-83823347 | None:intergenic | 40.0% | |
| !!! | TTTTTTGACAGAAGGTGCAG+TGG | + | chr7_3:83823327-83823346 | Msa1131260:intron | 40.0% |
| TCCCAAACGAGCTATTAACT+TGG | - | chr7_3:83823360-83823379 | None:intergenic | 40.0% | |
| ATGAAAGCTCCTACCTTTAC+TGG | + | chr7_3:83823393-83823412 | Msa1131260:CDS | 40.0% | |
| TGAAAGCTCCTACCTTTACT+GGG | + | chr7_3:83823394-83823413 | Msa1131260:CDS | 40.0% | |
| TATGTAACTGCAGGACATCA+AGG | - | chr7_3:83823535-83823554 | None:intergenic | 40.0% | |
| TATTGTCCAGGATTAACCGA+TGG | + | chr7_3:83823678-83823697 | Msa1131260:CDS | 40.0% | |
| TTTCATTCCTTCCACAACAC+TGG | + | chr7_3:83823723-83823742 | Msa1131260:CDS | 40.0% | |
| CTATGTCCACATTAAGACCA+CGG | - | chr7_3:83823761-83823780 | None:intergenic | 40.0% | |
| CTTAATGTGGACATAGTGCA+AGG | + | chr7_3:83823765-83823784 | Msa1131260:CDS | 40.0% | |
| ACAGATATAAGGGCCATGAA+TGG | + | chr7_3:83823870-83823889 | Msa1131260:CDS | 40.0% | |
| ATGTACAGCTTCACCATTCA+TGG | - | chr7_3:83823886-83823905 | None:intergenic | 40.0% | |
| !!! | GGCATGATTATTTTAGGAGG+TGG | + | chr7_3:83823924-83823943 | Msa1131260:CDS | 40.0% |
| TGCAAATGTGATGTTTCGGA+AGG | - | chr7_3:83823950-83823969 | None:intergenic | 40.0% | |
| GCGTTGCAAATGTGATGTTT+CGG | - | chr7_3:83823954-83823973 | None:intergenic | 40.0% | |
| AGGATCTGCGAAAACTGTTA+AGG | + | chr7_3:83824088-83824107 | Msa1131260:CDS | 40.0% | |
| GCGAACCTTTATCAATGAAG+AGG | - | chr7_3:83824282-83824301 | None:intergenic | 40.0% | |
| GGTTCGCTGTCAAAAGTAAA+AGG | + | chr7_3:83824295-83824314 | Msa1131260:three_prime_UTR | 40.0% | |
| GCTGTCAAAAGTAAAAGGTG+TGG | + | chr7_3:83824300-83824319 | Msa1131260:three_prime_UTR | 40.0% | |
| ! | TCAAAAGTAAAAGGTGTGGC+TGG | + | chr7_3:83824304-83824323 | Msa1131260:three_prime_UTR | 40.0% |
| ! | CAAAAGTAAAAGGTGTGGCT+GGG | + | chr7_3:83824305-83824324 | Msa1131260:three_prime_UTR | 40.0% |
| !!! | TGTGGGTTCTCTTAGTTTTG+AGG | + | chr7_3:83824512-83824531 | Msa1131260:three_prime_UTR | 40.0% |
| AAAAAATCCGAAAGCCTCGC+CGG | + | chr7_3:83820941-83820960 | Msa1131260:CDS | 45.0% | |
| !! | CGGAAAGTGTCTTCAAATCG+AGG | + | chr7_3:83820961-83820980 | Msa1131260:CDS | 45.0% |
| GAGGGTTATGATTTCAACCG+CGG | + | chr7_3:83820980-83820999 | Msa1131260:CDS | 45.0% | |
| CTCAAATCCATGCTCACTAC+TGG | + | chr7_3:83821022-83821041 | Msa1131260:CDS | 45.0% | |
| !! | GGTTTTCAAGCATCCAACCT+CGG | + | chr7_3:83821043-83821062 | Msa1131260:CDS | 45.0% |
| ! | GGCTACGTGTAAAGTGTTTC+TGG | + | chr7_3:83821263-83821282 | Msa1131260:CDS | 45.0% |
| CTTCCTTTGTCAGCATCACA+TGG | + | chr7_3:83821332-83821351 | Msa1131260:CDS | 45.0% | |
| TCACCATGTGATGCTGACAA+AGG | - | chr7_3:83821338-83821357 | None:intergenic | 45.0% | |
| TGCCTTGCACCAACGTATAA+AGG | + | chr7_3:83821713-83821732 | Msa1131260:CDS | 45.0% | |
| CTCCTTTATACGTTGGTGCA+AGG | - | chr7_3:83821718-83821737 | None:intergenic | 45.0% | |
| TTTGAGCGAAGATAAGCTCC+AGG | - | chr7_3:83821752-83821771 | None:intergenic | 45.0% | |
| GGAGCTTATCTTCGCTCAAA+AGG | + | chr7_3:83821752-83821771 | Msa1131260:CDS | 45.0% | |
| GCTCCCTACCAATATATAGC+AGG | - | chr7_3:83822535-83822554 | None:intergenic | 45.0% | |
| ACGTTTGATTGTTCTGGTGC+TGG | + | chr7_3:83822618-83822637 | Msa1131260:intron | 45.0% | |
| !! | GCCATGTGATTTTAGTGCCT+TGG | + | chr7_3:83822650-83822669 | Msa1131260:intron | 45.0% |
| ! | CCCAAGGCACTAAAATCACA+TGG | - | chr7_3:83822654-83822673 | None:intergenic | 45.0% |
| ACCTTGACTGGAGAATACAC+CGG | + | chr7_3:83822972-83822991 | Msa1131260:intron | 45.0% | |
| !! | GAATACACCGGTTCAATGTC+TGG | + | chr7_3:83822984-83823003 | Msa1131260:intron | 45.0% |
| CACATACACAAGTGAGGAAC+TGG | + | chr7_3:83823061-83823080 | Msa1131260:intron | 45.0% | |
| CATACACAAGTGAGGAACTG+GGG | + | chr7_3:83823063-83823082 | Msa1131260:intron | 45.0% | |
| ATGCCTGGAGTCACATTTAG+TGG | + | chr7_3:83823165-83823184 | Msa1131260:intron | 45.0% | |
| TGACCACTAAATGTGACTCC+AGG | - | chr7_3:83823171-83823190 | None:intergenic | 45.0% | |
| CTTGTATGCCCAGTAAAGGT+AGG | - | chr7_3:83823405-83823424 | None:intergenic | 45.0% | |
| CTACCTTTACTGGGCATACA+AGG | + | chr7_3:83823403-83823422 | Msa1131260:CDS | 45.0% | |
| TTGCCTTGTATGCCCAGTAA+AGG | - | chr7_3:83823409-83823428 | None:intergenic | 45.0% | |
| ! | AATGAGCCATCGGTTAATCC+TGG | - | chr7_3:83823687-83823706 | None:intergenic | 45.0% |
| AGGATTAACCGATGGCTCAT+TGG | + | chr7_3:83823686-83823705 | Msa1131260:CDS | 45.0% | |
| GGATTAACCGATGGCTCATT+GGG | + | chr7_3:83823687-83823706 | Msa1131260:CDS | 45.0% | |
| ACATTAAGACCACGGTTGTC+AGG | - | chr7_3:83823753-83823772 | None:intergenic | 45.0% | |
| ! | TGACAACCGTGGTCTTAATG+TGG | + | chr7_3:83823752-83823771 | Msa1131260:CDS | 45.0% |
| CATGCAGATCCTATGAAGAC+AGG | + | chr7_3:83823903-83823922 | Msa1131260:CDS | 45.0% | |
| AACGCCAACATGATGCGTAA+TGG | + | chr7_3:83823969-83823988 | Msa1131260:CDS | 45.0% | |
| TGCACCATTACGCATCATGT+TGG | - | chr7_3:83823976-83823995 | None:intergenic | 45.0% | |
| ! | ATCCAGATGAGGCTGTTTCA+TGG | + | chr7_3:83824054-83824073 | Msa1131260:CDS | 45.0% |
| ! | TCCAGATGAGGCTGTTTCAT+GGG | + | chr7_3:83824055-83824074 | Msa1131260:CDS | 45.0% |
| GTTTCATGGGGGAAAATACG+AGG | + | chr7_3:83824068-83824087 | Msa1131260:CDS | 45.0% | |
| TCGTTGCATCACAATGTACC+TGG | - | chr7_3:83824212-83824231 | None:intergenic | 45.0% | |
| ATGTTTCAGCAACCAGCAGT+GGG | - | chr7_3:83824242-83824261 | None:intergenic | 45.0% | |
| AATGTTTCAGCAACCAGCAG+TGG | - | chr7_3:83824243-83824262 | None:intergenic | 45.0% | |
| TCACAACTCTCAATGGCTTC+AGG | - | chr7_3:83824436-83824455 | None:intergenic | 45.0% | |
| !!! | GATTTTAAAAATTATAATTT+TGG | + | chr7_3:83822829-83822848 | Msa1131260:intron | 5.0% |
| TTTGAAGACACTTTCCGGCG+AGG | - | chr7_3:83820958-83820977 | None:intergenic | 50.0% | |
| TTGAATGGCTTCACCGAGGT+TGG | - | chr7_3:83821059-83821078 | None:intergenic | 50.0% | |
| CAACTTGAATGGCTTCACCG+AGG | - | chr7_3:83821063-83821082 | None:intergenic | 50.0% | |
| CGGATGGTTTGACTGGGAAT+TGG | + | chr7_3:83821961-83821980 | Msa1131260:intron | 50.0% | |
| CTGGGAATTGGACCTATGTC+CGG | + | chr7_3:83821973-83821992 | Msa1131260:intron | 50.0% | |
| TGGTTAGACCGGAGTTGAAC+CGG | - | chr7_3:83822948-83822967 | None:intergenic | 50.0% | |
| ACCGGTGTATTCTCCAGTCA+AGG | - | chr7_3:83822976-83822995 | None:intergenic | 50.0% | |
| CATGTCACCCAATGAGCCAT+CGG | - | chr7_3:83823697-83823716 | None:intergenic | 50.0% | |
| !! | TTCTGGAGCTCATCCAGATG+AGG | + | chr7_3:83824043-83824062 | Msa1131260:CDS | 50.0% |
| ! | CCAGATGAGGCTGTTTCATG+GGG | + | chr7_3:83824056-83824075 | Msa1131260:CDS | 50.0% |
| ! | CAGATGAGGCTGTTTCATGG+GGG | + | chr7_3:83824057-83824076 | Msa1131260:CDS | 50.0% |
| AACGATAGCATTCCCACTGC+TGG | + | chr7_3:83824227-83824246 | Msa1131260:CDS | 50.0% | |
| ACACTTTCCGGCGAGGCTTT+CGG | - | chr7_3:83820951-83820970 | None:intergenic | 55.0% | |
| !! | GCTGTTGATAATCGACGCCG+CGG | - | chr7_3:83821000-83821019 | None:intergenic | 55.0% |
| ACCTATGTCCGGAAGACCGA+GGG | + | chr7_3:83821984-83822003 | Msa1131260:intron | 55.0% | |
| !! | TGTTCTGGTGCTGGTTCGAC+TGG | + | chr7_3:83822627-83822646 | Msa1131260:intron | 55.0% |
| !! | GTTCTGGTGCTGGTTCGACT+GGG | + | chr7_3:83822628-83822647 | Msa1131260:intron | 55.0% |
| AAATGTTACGTCGGACGCCG+TGG | - | chr7_3:83823101-83823120 | None:intergenic | 55.0% | |
| ! | CGGCGTCCGACGTAACATTT+TGG | + | chr7_3:83823101-83823120 | Msa1131260:intron | 55.0% |
| AGGACTGCCAGTGTTGTGGA+AGG | - | chr7_3:83823733-83823752 | None:intergenic | 55.0% | |
| TGTCAGGACTGCCAGTGTTG+TGG | - | chr7_3:83823737-83823756 | None:intergenic | 55.0% | |
| CCCCATGAAACAGCCTCATC+TGG | - | chr7_3:83824059-83824078 | None:intergenic | 55.0% | |
| AGGTGTGGCTGGGATCTTGA+TGG | + | chr7_3:83824315-83824334 | Msa1131260:three_prime_UTR | 55.0% | |
| GACCTATGTCCGGAAGACCG+AGG | + | chr7_3:83821983-83822002 | Msa1131260:intron | 60.0% | |
| ACCCTCGGTCTTCCGGACAT+AGG | - | chr7_3:83821988-83822007 | None:intergenic | 60.0% | |
| AGGTCTGACCCTCGGTCTTC+CGG | - | chr7_3:83821995-83822014 | None:intergenic | 60.0% | |
| ACTGGCAGTCCTGACAACCG+TGG | + | chr7_3:83823741-83823760 | Msa1131260:CDS | 60.0% | |
| TGGGGTTCGAACCCCAGCCA+CGG | + | chr7_3:83823081-83823100 | Msa1131260:intron | 65.0% | |
| TTACGTCGGACGCCGTGGCT+GGG | - | chr7_3:83823096-83823115 | None:intergenic | 65.0% | |
| TACGTCGGACGCCGTGGCTG+GGG | - | chr7_3:83823095-83823114 | None:intergenic | 70.0% | |
| GTTACGTCGGACGCCGTGGC+TGG | - | chr7_3:83823097-83823116 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 83820845 | 83824634 | 83820845 | ID=Msa1131260;Name=Msa1131260 |
| chr7_3 | mRNA | 83820845 | 83824634 | 83820845 | ID=Msa1131260-mRNA-1;Parent=Msa1131260;Name=Msa1131260-mRNA-1;_AED=0.17;_eAED=0.16;_QI=27|0.66|0.57|0.85|0.66|0.71|7|344|420 |
| chr7_3 | exon | 83820845 | 83821093 | 83820845 | ID=Msa1131260-mRNA-1:exon:24869;Parent=Msa1131260-mRNA-1 |
| chr7_3 | exon | 83821207 | 83821353 | 83821207 | ID=Msa1131260-mRNA-1:exon:24870;Parent=Msa1131260-mRNA-1 |
| chr7_3 | exon | 83821662 | 83821880 | 83821662 | ID=Msa1131260-mRNA-1:exon:24871;Parent=Msa1131260-mRNA-1 |
| chr7_3 | exon | 83823338 | 83823440 | 83823338 | ID=Msa1131260-mRNA-1:exon:24872;Parent=Msa1131260-mRNA-1 |
| chr7_3 | exon | 83823529 | 83823575 | 83823529 | ID=Msa1131260-mRNA-1:exon:24873;Parent=Msa1131260-mRNA-1 |
| chr7_3 | exon | 83823663 | 83824109 | 83823663 | ID=Msa1131260-mRNA-1:exon:24874;Parent=Msa1131260-mRNA-1 |
| chr7_3 | exon | 83824213 | 83824634 | 83824213 | ID=Msa1131260-mRNA-1:exon:24875;Parent=Msa1131260-mRNA-1 |
| chr7_3 | five_prime_UTR | 83820845 | 83820871 | 83820845 | ID=Msa1131260-mRNA-1:five_prime_utr;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83820872 | 83821093 | 83820872 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83821207 | 83821353 | 83821207 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83821662 | 83821880 | 83821662 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83823338 | 83823440 | 83823338 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83823529 | 83823575 | 83823529 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83823663 | 83824109 | 83823663 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | CDS | 83824213 | 83824290 | 83824213 | ID=Msa1131260-mRNA-1:cds;Parent=Msa1131260-mRNA-1 |
| chr7_3 | three_prime_UTR | 83824291 | 83824634 | 83824291 | ID=Msa1131260-mRNA-1:three_prime_utr;Parent=Msa1131260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
